Commit Graph

43461 Commits

Author SHA1 Message Date
1c609ef3e4 cosmetic, more LAMMPS style 2025-03-30 23:37:11 -04:00
677e8dd681 documentation fixes 2025-03-30 23:35:45 -04:00
6e395424bc better align with LAMMPS' programming conventions 2025-03-30 23:30:15 -04:00
935e323d08 Merge branch 'develop' into bond/react-molmap_option 2025-03-30 23:27:50 -04:00
578b1cf936 fix typo
Co-authored-by: Shern Tee <shernren@gmail.com>
2025-03-30 01:32:02 -04:00
2da463a773 missed renames 2025-03-29 18:55:13 -04:00
367dd4635b Merge remote-tracking branch 'github/develop' into qeqr 2025-03-29 18:41:36 -04:00
fc9d7bc181 rename fix qeqr/reaxff to fix qeq/rel/reaxff 2025-03-29 18:40:47 -04:00
2396668965 Merge remote-tracking branch 'github/develop' into collected-small-fixes 2025-03-29 16:31:17 -04:00
285baf27b5 Merge pull request #4518 from akohlmey/file-formats
Add a general description of common file formats in LAMMPS
2025-03-29 16:30:31 -04:00
7ff9ee51e5 small tweaks 2025-03-29 15:56:34 -04:00
990007c87b whitespace, rewrap, and comments 2025-03-28 23:55:38 -04:00
4dbf18e2c9 small suggested changes 2025-03-28 23:15:33 -04:00
1172a8c6c8 Merge pull request #4506 from fxcoudert/mac
Update macOS info
2025-03-28 18:50:45 -04:00
aeed7a425f we only need to worry about Python3 now 2025-03-28 18:25:42 -04:00
b7b9a4a599 Update Kokkos library in LAMMPS to v4.6.0 2025-03-28 15:29:14 -06:00
9661c21052 comment out possible additional sections 2025-03-28 09:56:06 -04:00
c0321b5f00 More doc 2025-03-28 10:58:54 +01:00
9a55856758 forgot handling addstep_compute in setup() 2025-03-28 00:32:28 -04:00
09242c0b12 forgot handling addstep_compute in setup() 2025-03-28 00:31:01 -04:00
a17ec2a8d3 fix bug with addstep_compute skipping on first step 2025-03-28 00:18:32 -04:00
0263774595 must use addstep_compute() on next time based or variable step dump output 2025-03-28 00:17:59 -04:00
9ac09e839f trigger computes only if next variable step or time based dump present 2025-03-28 00:05:14 -04:00
963083b2d5 must use addstep_compute() on next variable dump output 2025-03-27 23:50:37 -04:00
8949a6262d Use "Contact the LAMMPS developers" consistently and add an errorurl() to such errors 2025-03-27 19:04:32 -04:00
c3309bc0b3 error message and programming style updates 2025-03-27 18:35:40 -04:00
c9be07df9c fix bug with addstep_compute skipping on first step 2025-03-27 18:28:06 -04:00
fc78806bc7 apply clang-format 2025-03-27 17:14:35 -04:00
f652687a3a add support for outputting the same temperature, pressure, and potential energy as the thermo output 2025-03-27 17:14:06 -04:00
738fb4a502 add info about restart files 2025-03-27 16:29:13 -04:00
d12f4b076b Dump pe, temp, press 2025-03-27 21:05:38 +01:00
032c1c39b0 Handle mass better 2025-03-27 20:14:29 +01:00
fce3246439 detect misformatted Sphinx directives 2025-03-27 13:37:13 -04:00
c9d557a9f2 add test for version related tags missing a colon 2025-03-27 13:20:08 -04:00
8eceb2b944 small updates and clarifications 2025-03-27 12:52:48 -04:00
dcb844b01b Safer printf 2025-03-27 17:27:08 +01:00
0c7c21925f Update .github/CODEOWNERS
Co-authored-by: Axel Kohlmeyer <akohlmey@gmail.com>
2025-03-27 16:55:35 +01:00
b0a8391413 Update CODEOWNERS 2025-03-27 16:23:58 +01:00
bb6470eb1a More flexibility: forces, vel, mass 2025-03-27 15:59:42 +01:00
855737cf04 implement derived extxyz dump style 2025-03-27 14:38:33 +01:00
2ad0cc1820 document extxyz dump style 2025-03-27 14:38:08 +01:00
f5dbf30965 improve error messages 2025-03-27 14:37:27 +01:00
f0b3b20653 add a write permission check before opening a pipe for compressed writes 2025-03-26 23:09:39 -04:00
dd313465e1 add support for writing one file per timestep with '*' wildcard 2025-03-26 22:44:35 -04:00
9661d020c1 Merge branch 'develop' into collected-small-fixes 2025-03-26 20:10:20 -04:00
c45558b640 some tweaks for local table of contents 2025-03-26 20:09:54 -04:00
2542b989ee small tweak 2025-03-26 19:59:52 -04:00
7f0b71f7c0 spelling 2025-03-26 17:36:27 -04:00
637b572600 Merge remote-tracking branch 'github/develop' into file-formats 2025-03-26 17:33:00 -04:00
465171d58f Merge pull request #4514 from akohlmey/library-handle-argument-errors
Improve handling argument errors with library interface functions
2025-03-26 14:35:30 -04:00