Files
lammps-gran-kokkos/bench/POTENTIALS/log.9Oct20.granular.4
2020-10-14 13:11:13 -04:00

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LAMMPS (9 Oct 2020)
using 1 OpenMP thread(s) per MPI task
# granular chute flow
units lj
atom_style sphere
boundary p p fs
newton off
comm_modify vel yes
read_data data.granular
Reading data file ...
orthogonal box = (0.0000000 0.0000000 0.0000000) to (40.000000 20.000000 37.288600)
2 by 1 by 2 MPI processor grid
reading atoms ...
32000 atoms
reading velocities ...
32000 velocities
read_data CPU = 0.052 seconds
pair_style gran/hooke/history 200000.0 NULL 50.0 NULL 0.5 0
pair_coeff * *
neighbor 0.1 bin
neigh_modify delay 5 every 1
timestep 0.0001
group bottom type 2
912 atoms in group bottom
group active subtract all bottom
31088 atoms in group active
neigh_modify exclude group bottom bottom
fix 1 all gravity 1.0 chute 26.0
fix 2 bottom freeze
fix 3 active nve/sphere
compute 1 all erotate/sphere
thermo_style custom step atoms ke c_1 vol
thermo_modify norm no
run 100
Neighbor list info ...
update every 1 steps, delay 5 steps, check yes
max neighbors/atom: 2000, page size: 100000
master list distance cutoff = 1.1
ghost atom cutoff = 1.1
binsize = 0.55, bins = 73 37 68
1 neighbor lists, perpetual/occasional/extra = 1 0 0
(1) pair gran/hooke/history, perpetual
attributes: half, newton off, size, history
pair build: half/size/bin/newtoff
stencil: half/bin/3d/newtoff
bin: standard
Per MPI rank memory allocation (min/avg/max) = 10.59 | 10.59 | 10.60 Mbytes
Step Atoms KinEng c_1 Volume
0 32000 784139.13 1601.1263 29833.783
100 32000 784292.08 1571.0968 29834.707
Loop time of 0.0952788 on 4 procs for 100 steps with 32000 atoms
Performance: 9068.124 tau/day, 1049.551 timesteps/s
95.4% CPU use with 4 MPI tasks x 1 OpenMP threads
MPI task timing breakdown:
Section | min time | avg time | max time |%varavg| %total
---------------------------------------------------------------
Pair | 0.044316 | 0.047274 | 0.049681 | 1.0 | 49.62
Neigh | 0.0079038 | 0.0079354 | 0.0079608 | 0.0 | 8.33
Comm | 0.0082569 | 0.0089372 | 0.0094819 | 0.5 | 9.38
Output | 6.9857e-05 | 9.3222e-05 | 0.00010514 | 0.0 | 0.10
Modify | 0.015689 | 0.016034 | 0.016789 | 0.4 | 16.83
Other | | 0.015 | | | 15.75
Nlocal: 8000.00 ave 8008 max 7992 min
Histogram: 2 0 0 0 0 0 0 0 0 2
Nghost: 2439.00 ave 2450 max 2428 min
Histogram: 2 0 0 0 0 0 0 0 0 2
Neighs: 29500.5 ave 30488 max 28513 min
Histogram: 2 0 0 0 0 0 0 0 0 2
Total # of neighbors = 118002
Ave neighs/atom = 3.6875625
Neighbor list builds = 2
Dangerous builds = 0
Total wall time: 0:00:00