99 lines
3.9 KiB
Groff
99 lines
3.9 KiB
Groff
LAMMPS (9 Oct 2020)
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using 1 OpenMP thread(s) per MPI task
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# eFF benchmark of H plasma
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units electron
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atom_style electron
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read_data data.eff
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Reading data file ...
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orthogonal box = (0.0000000 0.0000000 0.0000000) to (41.911791 41.911791 41.911791)
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1 by 2 by 2 MPI processor grid
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reading atoms ...
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32000 atoms
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reading velocities ...
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32000 velocities
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read_data CPU = 0.064 seconds
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pair_style eff/cut 12
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pair_coeff * *
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neigh_modify one 6000 page 60000
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comm_modify vel yes
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compute effTemp all temp/eff
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thermo 5
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thermo_style custom step etotal pe ke temp press
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thermo_modify temp effTemp
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fix 1 all nve/eff
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run 100
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Neighbor list info ...
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update every 1 steps, delay 10 steps, check yes
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max neighbors/atom: 6000, page size: 60000
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master list distance cutoff = 14
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ghost atom cutoff = 14
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binsize = 7, bins = 6 6 6
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1 neighbor lists, perpetual/occasional/extra = 1 0 0
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(1) pair eff/cut, perpetual
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attributes: half, newton on
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pair build: half/bin/atomonly/newton
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stencil: half/bin/3d/newton
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bin: standard
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Per MPI rank memory allocation (min/avg/max) = 102.1 | 105.5 | 109.0 Mbytes
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Step TotEng PotEng KinEng Temp Press
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0 4046.5854 796.63785 3249.9475 42763.133 4.4764483e+12
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5 4046.5854 796.95799 3249.6274 42758.92 4.4728546e+12
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10 4046.5854 797.71165 3248.8737 42749.004 4.4690821e+12
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15 4046.5854 798.8949 3247.6905 42733.435 4.4651331e+12
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20 4046.5854 800.50332 3246.0821 42712.271 4.4610102e+12
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25 4046.5854 802.53206 3244.0534 42685.577 4.456716e+12
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30 4046.5855 804.97579 3241.6097 42653.422 4.4522535e+12
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35 4046.5855 807.82873 3238.7567 42615.883 4.4476257e+12
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40 4046.5855 811.08467 3235.5008 42573.041 4.4428357e+12
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45 4046.5855 814.73696 3231.8485 42524.984 4.437887e+12
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50 4046.5855 818.77851 3227.807 42471.806 4.432783e+12
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55 4046.5855 823.20183 3223.3837 42413.603 4.4275273e+12
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60 4046.5856 827.99901 3218.5866 42350.482 4.4221238e+12
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65 4046.5856 833.16176 3213.4238 42282.55 4.4165764e+12
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70 4046.5856 838.68137 3207.9042 42209.923 4.4108891e+12
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75 4046.5856 844.54877 3202.0369 42132.719 4.4050662e+12
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80 4046.5857 850.75454 3195.8311 42051.064 4.399112e+12
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85 4046.5857 857.28886 3189.2968 41965.085 4.393031e+12
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90 4046.5857 864.14162 3182.4441 41874.916 4.3868277e+12
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95 4046.5857 871.30234 3175.2834 41780.695 4.3805068e+12
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100 4046.5858 878.76023 3167.8255 41682.563 4.3740731e+12
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Loop time of 100.431 on 4 procs for 100 steps with 32000 atoms
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Performance: 86.029 fs/day, 0.279 hours/fs, 0.996 timesteps/s
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95.8% CPU use with 4 MPI tasks x 1 OpenMP threads
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MPI task timing breakdown:
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Section | min time | avg time | max time |%varavg| %total
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---------------------------------------------------------------
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Pair | 89.149 | 93.787 | 97.971 | 41.9 | 93.38
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Neigh | 0 | 0 | 0 | 0.0 | 0.00
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Comm | 2.4073 | 6.5821 | 11.21 | 157.8 | 6.55
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Output | 0.0014203 | 0.0094504 | 0.019111 | 8.3 | 0.01
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Modify | 0.016678 | 0.016999 | 0.017425 | 0.2 | 0.02
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Other | | 0.03524 | | | 0.04
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Nlocal: 8000.00 ave 8112 max 7875 min
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Histogram: 1 1 0 0 0 0 0 0 0 2
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Nghost: 65589.0 ave 66004 max 65177 min
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Histogram: 2 0 0 0 0 0 0 0 0 2
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Neighs: 2.02643e+07 ave 2.11126e+07 max 1.94058e+07 min
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Histogram: 2 0 0 0 0 0 0 0 0 2
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Total # of neighbors = 81057159
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Ave neighs/atom = 2533.0362
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Neighbor list builds = 0
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Dangerous builds = 0
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Please see the log.cite file for references relevant to this simulation
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Total wall time: 0:01:42
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