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release on 2012-11-28_19-59-46
This commit is contained in:
82
README
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82
README
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@ -0,0 +1,82 @@
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/*---------------------------------------------------------------------------*\
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CFDEMcoupling - Open Source CFD-DEM coupling
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||||||
|
|
||||||
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CFDEMcoupling is part of the CFDEMproject
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||||||
|
www.cfdem.com
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||||||
|
Christoph Goniva, christoph.goniva@cfdem.com
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||||||
|
Copyright 2009-2012 JKU Linz
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||||||
|
Copyright 2012- DCS Computing GmbH, Linz
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||||||
|
-------------------------------------------------------------------------------
|
||||||
|
License
|
||||||
|
This file is part of CFDEMcoupling.
|
||||||
|
|
||||||
|
CFDEMcoupling is free software; you can redistribute it and/or modify it
|
||||||
|
under the terms of the GNU General Public License as published by the
|
||||||
|
Free Software Foundation; either version 3 of the License, or (at your
|
||||||
|
option) any later version.
|
||||||
|
|
||||||
|
CFDEMcoupling is distributed in the hope that it will be useful, but WITHOUT
|
||||||
|
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
|
||||||
|
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
|
||||||
|
for more details.
|
||||||
|
|
||||||
|
You should have received a copy of the GNU General Public License
|
||||||
|
along with CFDEMcoupling; if not, write to the Free Software Foundation,
|
||||||
|
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
|
||||||
|
|
||||||
|
Description
|
||||||
|
This code is designed to realize coupled CFD-DEM simulations using LIGGGHTS
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||||||
|
and OpenFOAM. Note: this code is not part of OpenFOAM (see DISCLAIMER).
|
||||||
|
\*---------------------------------------------------------------------------*/
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||||||
|
|
||||||
|
|
||||||
|
CFDEM coupling provides an open source parallel coupled CFD-DEM framework
|
||||||
|
combining the strengths of LIGGGHTS DEM code and the Open Source
|
||||||
|
CFD package OpenFOAM(R)(*). The CFDEMcoupling toolbox allows to expand
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||||||
|
standard CFD solvers of OpenFOAM(R)(*) to include a coupling to the DEM
|
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|
code LIGGGHTS. In this toolbox the particle representation within the
|
||||||
|
CFD solver is organized by "cloud" classes. Key functionalities are organised
|
||||||
|
in sub-models (e.g. force models, data exchange models, etc.) which can easily
|
||||||
|
be selected and combined by dictionary settings.
|
||||||
|
|
||||||
|
The coupled solvers run fully parallel on distributed-memory clusters.
|
||||||
|
|
||||||
|
Features are:
|
||||||
|
|
||||||
|
- its modular approach allows users to easily implement new models
|
||||||
|
- its MPI parallelization enables to use it for large scale problems
|
||||||
|
- the "forum"_lws on CFD-DEM gives the possibility to exchange with other
|
||||||
|
users / developers
|
||||||
|
- the use of GIT allows to easily update to the latest version
|
||||||
|
- basic documentation is provided
|
||||||
|
|
||||||
|
The file structure:
|
||||||
|
|
||||||
|
- "src" directory including the source files of the coupling toolbox and models
|
||||||
|
- "applications" directory including the solver files for coupled CFD-DEM simulations
|
||||||
|
- "doc" directory including the documentation of CFDEMcoupling
|
||||||
|
- "tutorials" directory including basic tutorial cases showing the functionality
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
Details on installation are given on the "www.cfdem.com"
|
||||||
|
|
||||||
|
The functionality of this CFD-DEM framwork is described via "tutorial cases" showing
|
||||||
|
how to use different solvers and models.
|
||||||
|
|
||||||
|
CFDEMcoupling stands for Computational Fluid Dynamics (CFD) -
|
||||||
|
Discrete Element Method (DEM) coupling.
|
||||||
|
|
||||||
|
CFDEMcoupling is an open-source code, distributed freely under the terms of the
|
||||||
|
GNU Public License (GPL).
|
||||||
|
|
||||||
|
Core development of CFDEMcoupling is done by
|
||||||
|
Christoph Goniva and Christoph Kloss, both at DCS Computing GmbH, 2012
|
||||||
|
|
||||||
|
|
||||||
|
\*---------------------------------------------------------------------------*/
|
||||||
|
(*) "OpenFOAM(R)"_of is a registered trade mark of Silicon Graphics
|
||||||
|
International Corp. This offering is not affiliated, approved or endorsed by
|
||||||
|
Silicon Graphics International Corp., the producer of the OpenFOAM(R) software
|
||||||
|
and owner of the OpenFOAM(R) trademark.
|
||||||
|
\*---------------------------------------------------------------------------*/
|
||||||
Binary file not shown.
Binary file not shown.
@ -28,7 +28,7 @@ engineProps
|
|||||||
<PRE>locateModel engine;
|
<PRE>locateModel engine;
|
||||||
engineProps
|
engineProps
|
||||||
{
|
{
|
||||||
treeSearch false;
|
treeSearch true;
|
||||||
}
|
}
|
||||||
</PRE>
|
</PRE>
|
||||||
<P><B>Description:</B>
|
<P><B>Description:</B>
|
||||||
@ -36,9 +36,9 @@ engineProps
|
|||||||
<P>The locateModel "engine" locates the CFD cell and cellID corresponding to a given position.
|
<P>The locateModel "engine" locates the CFD cell and cellID corresponding to a given position.
|
||||||
The engineSearch locate Model can be used with different settings to use different algorithms:
|
The engineSearch locate Model can be used with different settings to use different algorithms:
|
||||||
</P>
|
</P>
|
||||||
<UL><LI>treeSearch false; will execute some geometric (linear) search using the last known cellID (recommended)
|
<UL><LI>treeSearch false; will execute some geometric (linear) search using the last known cellID
|
||||||
|
|
||||||
<LI>treeSearch true; will use a recursive tree structure to find the cell.
|
<LI>treeSearch true; will use a recursive tree structure to find the cell (recommended).
|
||||||
|
|
||||||
|
|
||||||
</UL>
|
</UL>
|
||||||
|
|||||||
@ -25,7 +25,7 @@ engineProps
|
|||||||
locateModel engine;
|
locateModel engine;
|
||||||
engineProps
|
engineProps
|
||||||
\{
|
\{
|
||||||
treeSearch false;
|
treeSearch true;
|
||||||
\} :pre
|
\} :pre
|
||||||
|
|
||||||
[Description:]
|
[Description:]
|
||||||
@ -33,8 +33,8 @@ engineProps
|
|||||||
The locateModel "engine" locates the CFD cell and cellID corresponding to a given position.
|
The locateModel "engine" locates the CFD cell and cellID corresponding to a given position.
|
||||||
The engineSearch locate Model can be used with different settings to use different algorithms:
|
The engineSearch locate Model can be used with different settings to use different algorithms:
|
||||||
|
|
||||||
treeSearch false; will execute some geometric (linear) search using the last known cellID (recommended) :ulb,l
|
treeSearch false; will execute some geometric (linear) search using the last known cellID :ulb,l
|
||||||
treeSearch true; will use a recursive tree structure to find the cell. :l
|
treeSearch true; will use a recursive tree structure to find the cell (recommended). :l
|
||||||
:ule
|
:ule
|
||||||
|
|
||||||
[Restrictions:] none.
|
[Restrictions:] none.
|
||||||
|
|||||||
@ -28,7 +28,7 @@ turboEngineProps
|
|||||||
<PRE>locateModel turboEngine;
|
<PRE>locateModel turboEngine;
|
||||||
turboEngineProps
|
turboEngineProps
|
||||||
{
|
{
|
||||||
treeSearch false;
|
treeSearch true;
|
||||||
}
|
}
|
||||||
</PRE>
|
</PRE>
|
||||||
<P><B>Description:</B>
|
<P><B>Description:</B>
|
||||||
@ -37,10 +37,9 @@ turboEngineProps
|
|||||||
</P>
|
</P>
|
||||||
<P>The turboEngineSearch locate Model can be used with different settings to use different algorithms:
|
<P>The turboEngineSearch locate Model can be used with different settings to use different algorithms:
|
||||||
</P>
|
</P>
|
||||||
<UL><LI>faceDecomp false; treeSearch false; will execute some geometric (linear) search using the last known cellID (recommended)
|
<UL><LI>faceDecomp false; treeSearch false; will execute some geometric (linear) search using the last known cellID
|
||||||
|
|
||||||
<LI>faceDecomp false; treeSearch true; will use a recursive tree structure to find the cell.
|
|
||||||
|
|
||||||
|
faceDecomp false; treeSearch true; will use a recursive tree structure to find the cell. (recommended):l
|
||||||
|
|
||||||
</UL>
|
</UL>
|
||||||
<P><B>Restrictions:</B> none.
|
<P><B>Restrictions:</B> none.
|
||||||
|
|||||||
@ -25,7 +25,7 @@ turboEngineProps
|
|||||||
locateModel turboEngine;
|
locateModel turboEngine;
|
||||||
turboEngineProps
|
turboEngineProps
|
||||||
\{
|
\{
|
||||||
treeSearch false;
|
treeSearch true;
|
||||||
\} :pre
|
\} :pre
|
||||||
|
|
||||||
[Description:]
|
[Description:]
|
||||||
@ -34,8 +34,8 @@ The locateModel "turboEngine" locates the CFD cell and cellID corresponding to a
|
|||||||
|
|
||||||
The turboEngineSearch locate Model can be used with different settings to use different algorithms:
|
The turboEngineSearch locate Model can be used with different settings to use different algorithms:
|
||||||
|
|
||||||
faceDecomp false; treeSearch false; will execute some geometric (linear) search using the last known cellID (recommended) :ulb,l
|
faceDecomp false; treeSearch false; will execute some geometric (linear) search using the last known cellID :ulb,l
|
||||||
faceDecomp false; treeSearch true; will use a recursive tree structure to find the cell. :l
|
faceDecomp false; treeSearch true; will use a recursive tree structure to find the cell. (recommended):l
|
||||||
:ule
|
:ule
|
||||||
|
|
||||||
[Restrictions:] none.
|
[Restrictions:] none.
|
||||||
|
|||||||
@ -20,18 +20,33 @@ $(forceModels)/forceModel/forceModel.C
|
|||||||
$(forceModels)/forceModel/newForceModel.C
|
$(forceModels)/forceModel/newForceModel.C
|
||||||
$(forceModels)/noDrag/noDrag.C
|
$(forceModels)/noDrag/noDrag.C
|
||||||
$(forceModels)/DiFeliceDrag/DiFeliceDrag.C
|
$(forceModels)/DiFeliceDrag/DiFeliceDrag.C
|
||||||
|
$(forceModels)/DiFeliceDragNLift/DiFeliceDragNLift.C
|
||||||
$(forceModels)/GidaspowDrag/GidaspowDrag.C
|
$(forceModels)/GidaspowDrag/GidaspowDrag.C
|
||||||
$(forceModels)/SchillerNaumannDrag/SchillerNaumannDrag.C
|
$(forceModels)/SchillerNaumannDrag/SchillerNaumannDrag.C
|
||||||
$(forceModels)/Archimedes/Archimedes.C
|
$(forceModels)/Archimedes/Archimedes.C
|
||||||
$(forceModels)/ArchimedesIB/ArchimedesIB.C
|
$(forceModels)/ArchimedesIB/ArchimedesIB.C
|
||||||
$(forceModels)/interface/interface.C
|
$(forceModels)/interface/interface.C
|
||||||
$(forceModels)/ShirgaonkarIB/ShirgaonkarIB.C
|
$(forceModels)/ShirgaonkarIB/ShirgaonkarIB.C
|
||||||
|
$(forceModels)/fieldTimeAverage/fieldTimeAverage.C
|
||||||
|
$(forceModels)/fieldBound/fieldBound.C
|
||||||
|
$(forceModels)/volWeightedAverage/volWeightedAverage.C
|
||||||
|
$(forceModels)/totalMomentumExchange/totalMomentumExchange.C
|
||||||
$(forceModels)/KochHillDrag/KochHillDrag.C
|
$(forceModels)/KochHillDrag/KochHillDrag.C
|
||||||
|
$(forceModels)/BeetstraDrag/multiphaseFlowBasic/multiphaseFlowBasic.C
|
||||||
|
$(forceModels)/BeetstraDrag/BeetstraDrag.C
|
||||||
|
$(forceModels)/LaEuScalarLiquid/LaEuScalarLiquid.C
|
||||||
$(forceModels)/LaEuScalarTemp/LaEuScalarTemp.C
|
$(forceModels)/LaEuScalarTemp/LaEuScalarTemp.C
|
||||||
|
$(forceModels)/LaEuScalarDust/LaEuScalarDust.C
|
||||||
$(forceModels)/virtualMassForce/virtualMassForce.C
|
$(forceModels)/virtualMassForce/virtualMassForce.C
|
||||||
$(forceModels)/gradPForce/gradPForce.C
|
$(forceModels)/gradPForce/gradPForce.C
|
||||||
|
$(forceModels)/gradULiftForce/gradULiftForce.C
|
||||||
$(forceModels)/viscForce/viscForce.C
|
$(forceModels)/viscForce/viscForce.C
|
||||||
$(forceModels)/MeiLift/MeiLift.C
|
$(forceModels)/MeiLift/MeiLift.C
|
||||||
|
$(forceModels)/KochHillDragNLift/KochHillDragNLift.C
|
||||||
|
$(forceModels)/solidsPressureForce/solidsPressureForce.C
|
||||||
|
$(forceModels)/periodicPressure/periodicPressure.C
|
||||||
|
$(forceModels)/periodicPressureControl/periodicPressureControl.C
|
||||||
|
$(forceModels)/averageSlipVel/averageSlipVel.C
|
||||||
|
|
||||||
$(forceModelsMS)/forceModelMS/forceModelMS.C
|
$(forceModelsMS)/forceModelMS/forceModelMS.C
|
||||||
$(forceModelsMS)/forceModelMS/newForceModelMS.C
|
$(forceModelsMS)/forceModelMS/newForceModelMS.C
|
||||||
@ -42,6 +57,7 @@ $(IOModels)/IOModel/newIOModel.C
|
|||||||
$(IOModels)/noIO/noIO.C
|
$(IOModels)/noIO/noIO.C
|
||||||
$(IOModels)/basicIO/basicIO.C
|
$(IOModels)/basicIO/basicIO.C
|
||||||
$(IOModels)/trackIO/trackIO.C
|
$(IOModels)/trackIO/trackIO.C
|
||||||
|
$(IOModels)/sophIO/sophIO.C
|
||||||
|
|
||||||
$(voidFractionModels)/voidFractionModel/voidFractionModel.C
|
$(voidFractionModels)/voidFractionModel/voidFractionModel.C
|
||||||
$(voidFractionModels)/voidFractionModel/newVoidFractionModel.C
|
$(voidFractionModels)/voidFractionModel/newVoidFractionModel.C
|
||||||
@ -60,20 +76,22 @@ $(locateModels)/turboEngineSearch/turboEngineSearch.C
|
|||||||
$(locateModels)/turboEngineSearchM2M/turboEngineSearchM2M.C
|
$(locateModels)/turboEngineSearchM2M/turboEngineSearchM2M.C
|
||||||
$(locateModels)/engineSearchIB/engineSearchIB.C
|
$(locateModels)/engineSearchIB/engineSearchIB.C
|
||||||
|
|
||||||
|
|
||||||
$(meshMotionModels)/meshMotionModel/meshMotionModel.C
|
$(meshMotionModels)/meshMotionModel/meshMotionModel.C
|
||||||
$(meshMotionModels)/meshMotionModel/newMeshMotionModel.C
|
$(meshMotionModels)/meshMotionModel/newMeshMotionModel.C
|
||||||
$(meshMotionModels)/noMeshMotion/noMeshMotion.C
|
$(meshMotionModels)/noMeshMotion/noMeshMotion.C
|
||||||
|
$(meshMotionModels)/DEMdrivenMeshMotion/DEMdrivenMeshMotion.C
|
||||||
|
|
||||||
$(momCoupleModels)/momCoupleModel/momCoupleModel.C
|
$(momCoupleModels)/momCoupleModel/momCoupleModel.C
|
||||||
$(momCoupleModels)/momCoupleModel/newMomCoupleModel.C
|
$(momCoupleModels)/momCoupleModel/newMomCoupleModel.C
|
||||||
$(momCoupleModels)/explicitCouple/explicitCouple.C
|
$(momCoupleModels)/explicitCouple/explicitCouple.C
|
||||||
|
$(momCoupleModels)/explicitCoupleSource/explicitCoupleSource.C
|
||||||
$(momCoupleModels)/implicitCouple/implicitCouple.C
|
$(momCoupleModels)/implicitCouple/implicitCouple.C
|
||||||
$(momCoupleModels)/noCouple/noCouple.C
|
$(momCoupleModels)/noCouple/noCouple.C
|
||||||
|
|
||||||
$(regionModels)/regionModel/regionModel.C
|
$(regionModels)/regionModel/regionModel.C
|
||||||
$(regionModels)/regionModel/newRegionModel.C
|
$(regionModels)/regionModel/newRegionModel.C
|
||||||
$(regionModels)/allRegion/allRegion.C
|
$(regionModels)/allRegion/allRegion.C
|
||||||
|
$(regionModels)/differentialRegion/differentialRegion.C
|
||||||
|
|
||||||
$(dataExchangeModels)/dataExchangeModel/dataExchangeModel.C
|
$(dataExchangeModels)/dataExchangeModel/dataExchangeModel.C
|
||||||
$(dataExchangeModels)/dataExchangeModel/newDataExchangeModel.C
|
$(dataExchangeModels)/dataExchangeModel/newDataExchangeModel.C
|
||||||
|
|||||||
Binary file not shown.
Binary file not shown.
@ -148,7 +148,9 @@ twoWayM2M::~twoWayM2M()
|
|||||||
delete[] lost_pos_;
|
delete[] lost_pos_;
|
||||||
delete[] cellID_foam_;
|
delete[] cellID_foam_;
|
||||||
delete[] pos_foam_;
|
delete[] pos_foam_;
|
||||||
//delete[] lmp2foam_;
|
delete lmp2foam_;
|
||||||
|
delete lmp2foam_vec_;
|
||||||
|
delete foam2lmp_vec_;
|
||||||
//delete lmp;
|
//delete lmp;
|
||||||
}
|
}
|
||||||
|
|
||||||
@ -247,7 +249,7 @@ void Foam::twoWayM2M::allocateArray
|
|||||||
) const
|
) const
|
||||||
{
|
{
|
||||||
//if(length==-1) then LIGGGHTS uses own length data
|
//if(length==-1) then LIGGGHTS uses own length data
|
||||||
allocate_external_double(array, width,length,initVal,lmp);
|
allocate_external_double(array, width,max(length,1),initVal,lmp);
|
||||||
}
|
}
|
||||||
|
|
||||||
void Foam::twoWayM2M::allocateArray
|
void Foam::twoWayM2M::allocateArray
|
||||||
@ -272,7 +274,7 @@ void Foam::twoWayM2M::allocateArray
|
|||||||
) const
|
) const
|
||||||
{
|
{
|
||||||
//if(length==-1) then LIGGGHTS uses own length data
|
//if(length==-1) then LIGGGHTS uses own length data
|
||||||
allocate_external_int(array, width,length,initVal,lmp);
|
allocate_external_int(array, width,max(length,1),initVal,lmp);
|
||||||
}
|
}
|
||||||
|
|
||||||
void Foam::twoWayM2M::allocateArray
|
void Foam::twoWayM2M::allocateArray
|
||||||
@ -352,19 +354,22 @@ int Foam::twoWayM2M::getNumberOfClumps() const
|
|||||||
|
|
||||||
void Foam::twoWayM2M::syncIDs() const
|
void Foam::twoWayM2M::syncIDs() const
|
||||||
{
|
{
|
||||||
|
// if I do not creat new communicators it fails at liggghts porcessor transfer!
|
||||||
|
// this should probably not be done that often!!!
|
||||||
|
delete lmp2foam_;
|
||||||
|
delete lmp2foam_vec_;
|
||||||
|
delete foam2lmp_vec_;
|
||||||
|
lmp2foam_ = new Many2Many(MPI_COMM_WORLD);
|
||||||
|
lmp2foam_vec_ = new Many2Many(MPI_COMM_WORLD);
|
||||||
|
foam2lmp_vec_ = new Many2Many(MPI_COMM_WORLD);
|
||||||
|
//?=======
|
||||||
|
|
||||||
//MPI_Barrier(MPI_COMM_WORLD);
|
//MPI_Barrier(MPI_COMM_WORLD);
|
||||||
//Pout << "== syncIDs " << endl;
|
//Pout << couplingStep_ << "st == syncIDs " << endl;
|
||||||
|
|
||||||
particleCloud_.clockM().start(5,"recv_DEM_ids");
|
particleCloud_.clockM().start(5,"recv_DEM_ids");
|
||||||
// get data from lammps
|
// get data from lammps
|
||||||
int nlocal_lammps_old=nlocal_lammps_;
|
|
||||||
nlocal_lammps_ = *((int *) lammps_extract_global(lmp,"nlocal"));
|
nlocal_lammps_ = *((int *) lammps_extract_global(lmp,"nlocal"));
|
||||||
|
|
||||||
// weak form to detect lmp proc change - this will cause problems!!!
|
|
||||||
//bool comRun=false;
|
|
||||||
//if(nlocal_lammps_old != nlocal_lammps_) comRun=true;
|
|
||||||
//MPI_Allreduce(&comRun, &firstRun_, 1, MPI_INT, MPI_MAX, MPI_COMM_WORLD);
|
|
||||||
|
|
||||||
int* id_lammps_sync;
|
int* id_lammps_sync;
|
||||||
double** pos_lammps_sync;
|
double** pos_lammps_sync;
|
||||||
if(firstRun_) // do not forget iterator !
|
if(firstRun_) // do not forget iterator !
|
||||||
@ -380,17 +385,11 @@ void Foam::twoWayM2M::syncIDs() const
|
|||||||
|
|
||||||
Foam::dataExchangeModel::allocateArray(pos_lammps_,-1.,3,nlocal_lammps_); // do I need this???
|
Foam::dataExchangeModel::allocateArray(pos_lammps_,-1.,3,nlocal_lammps_); // do I need this???
|
||||||
pos_lammps_ = (double **) lammps_extract_atom(lmp,"x");
|
pos_lammps_ = (double **) lammps_extract_atom(lmp,"x");
|
||||||
|
}
|
||||||
//for (int i = 0; i < nlocal_lammps_; i++){
|
else
|
||||||
// vector pp;
|
|
||||||
// for (int j = 0; j < 3; j++) pp[j]=pos_lammps_[i][j];
|
|
||||||
// Pout << "pp=" << pp << endl;
|
|
||||||
//}
|
|
||||||
|
|
||||||
}else
|
|
||||||
{
|
{
|
||||||
// re-arrange data using map
|
// re-arrange data using map
|
||||||
Foam::dataExchangeModel::allocateArray(id_lammps_sync,-1.,nlocal_lammps_);
|
Foam::dataExchangeModel::allocateArray(id_lammps_sync,-1.,nlocal_lammps_); // probably not necessary
|
||||||
id_lammps_sync = (int *) lammps_extract_atom(lmp,"id");
|
id_lammps_sync = (int *) lammps_extract_atom(lmp,"id");
|
||||||
|
|
||||||
delete [] id_lammps_vec_;
|
delete [] id_lammps_vec_;
|
||||||
@ -404,10 +403,10 @@ void Foam::twoWayM2M::syncIDs() const
|
|||||||
lmp2foam_vec_->setup(nlocal_lammps_*3,id_lammps_vec_,nlocal_foam_*3,id_foam_vec_);
|
lmp2foam_vec_->setup(nlocal_lammps_*3,id_lammps_vec_,nlocal_foam_*3,id_foam_vec_);
|
||||||
foam2lmp_vec_->setup(nlocal_foam_*3,id_foam_vec_,nlocal_lammps_*3,id_lammps_vec_);
|
foam2lmp_vec_->setup(nlocal_foam_*3,id_foam_vec_,nlocal_lammps_*3,id_lammps_vec_);
|
||||||
|
|
||||||
|
// map data according to last TS
|
||||||
Foam::dataExchangeModel::allocateArray(id_lammps_,-1,nlocal_foam_); // probably not necessary
|
Foam::dataExchangeModel::allocateArray(id_lammps_,-1,nlocal_foam_); // probably not necessary
|
||||||
lmp2foam_->exchange(id_lammps_sync, id_lammps_);
|
lmp2foam_->exchange(id_lammps_sync, id_lammps_);
|
||||||
|
|
||||||
|
|
||||||
Foam::dataExchangeModel::allocateArray(pos_lammps_sync,-1.,3,nlocal_lammps_); // probably not necessary
|
Foam::dataExchangeModel::allocateArray(pos_lammps_sync,-1.,3,nlocal_lammps_); // probably not necessary
|
||||||
pos_lammps_sync = (double **) lammps_extract_atom(lmp,"x");
|
pos_lammps_sync = (double **) lammps_extract_atom(lmp,"x");
|
||||||
|
|
||||||
@ -417,66 +416,14 @@ void Foam::twoWayM2M::syncIDs() const
|
|||||||
Foam::dataExchangeModel::allocateArray(pos_lammps_,-1.,3,nlocal_foam_);
|
Foam::dataExchangeModel::allocateArray(pos_lammps_,-1.,3,nlocal_foam_);
|
||||||
lmp2foam_vec_->exchange(&(pos_lammps_sync[0][0]), &(gugu[0][0]));
|
lmp2foam_vec_->exchange(&(pos_lammps_sync[0][0]), &(gugu[0][0]));
|
||||||
|
|
||||||
// try the same with getData
|
|
||||||
//double** gugu;
|
|
||||||
//Foam::dataExchangeModel::allocateArray(gugu,-1.,3,nlocal_foam_);
|
|
||||||
//Foam::dataExchangeModel::allocateArray(pos_lammps_,-1.,3,nlocal_foam_);
|
|
||||||
//getData("x","vector-atom",gugu,1);
|
|
||||||
|
|
||||||
// conversion of array (should not be necessary if above problem is solved)
|
// conversion of array (should not be necessary if above problem is solved)
|
||||||
for (int i = 0; i < nlocal_foam_; i++)
|
for (int i = 0; i < nlocal_foam_; i++)
|
||||||
for (int j = 0; j < 3; j++)
|
for (int j = 0; j < 3; j++)
|
||||||
pos_lammps_[i][j]=gugu[0][i*3+j];
|
pos_lammps_[i][j]=gugu[0][i*3+j];
|
||||||
|
|
||||||
/*// test communication - works!!!
|
|
||||||
int* llv;
|
|
||||||
int* ovv;
|
|
||||||
Many2Many* l2f = new Many2Many(MPI_COMM_WORLD);
|
|
||||||
double** gaga;
|
|
||||||
if(Pstream::myProcNo()==0)
|
|
||||||
{
|
|
||||||
Foam::dataExchangeModel::allocateArray(llv,0,6);
|
|
||||||
Foam::dataExchangeModel::allocateArray(ovv,0,1);
|
|
||||||
for(int i=0;i<6;i++)
|
|
||||||
llv[i]=i+1;
|
|
||||||
ovv[0]=-1;
|
|
||||||
l2f->setup(6,llv,0,ovv);
|
|
||||||
l2f->exchange(&(pos_lammps_sync[0][0]), &(gaga[0][0]));
|
|
||||||
}else{
|
|
||||||
Foam::dataExchangeModel::allocateArray(llv,0,1);
|
|
||||||
Foam::dataExchangeModel::allocateArray(ovv,0,6);
|
|
||||||
for(int i=0;i<6;i++)
|
|
||||||
ovv[i]=i+1;
|
|
||||||
llv[0]=-1;
|
|
||||||
l2f->setup(0,llv,6,ovv);
|
|
||||||
|
|
||||||
double** gugu;
|
|
||||||
Foam::dataExchangeModel::allocateArray(gaga,-1.,3,2);
|
|
||||||
Foam::dataExchangeModel::allocateArray(gugu,-1.,3,2);
|
|
||||||
l2f->exchange(&(pos_lammps_sync[0][0]), &(gugu[0][0]));
|
|
||||||
|
|
||||||
// this does not work! -conversion needed!
|
|
||||||
//for (int i = 0; i < 2; i++)
|
|
||||||
// Pout << "getDataXX: " << "v" <<"=" << gugu[i][0]<<","<< gugu[i][1]<<","<< gugu[i][2]<<endl;
|
|
||||||
|
|
||||||
// conversion of array
|
|
||||||
for (int i = 0; i < 2; i++)
|
|
||||||
for (int j = 0; j < 3; j++)
|
|
||||||
gaga[i][j]=gugu[0][i*3+j];
|
|
||||||
|
|
||||||
// output
|
|
||||||
for (int i = 0; i < 2; i++)
|
|
||||||
Pout << "getData3: " << "v" <<"=" << gaga[i][0]<<","<< gaga[i][1]<<","<< gaga[i][2]<<endl;
|
|
||||||
}*/
|
|
||||||
|
|
||||||
}
|
}
|
||||||
particleCloud_.clockM().stop("recv_DEM_ids");
|
particleCloud_.clockM().stop("recv_DEM_ids");
|
||||||
|
|
||||||
// make a copy of liggghts ID array
|
|
||||||
/*delete [] id_lammpsComm_;
|
|
||||||
Foam::dataExchangeModel::allocateArray(id_lammpsComm_,0,nlocal_lammps_);
|
|
||||||
for(int i=0;i<nlocal_lammps_;i++) id_lammpsComm_[i]=id_lammps_[i];*/
|
|
||||||
|
|
||||||
particleCloud_.clockM().start(6,"locateParticle()");
|
particleCloud_.clockM().start(6,"locateParticle()");
|
||||||
locateParticle();
|
locateParticle();
|
||||||
particleCloud_.clockM().stop("locateParticle()");
|
particleCloud_.clockM().stop("locateParticle()");
|
||||||
@ -490,28 +437,28 @@ void Foam::twoWayM2M::syncIDs() const
|
|||||||
{
|
{
|
||||||
if(firstRun_)
|
if(firstRun_)
|
||||||
{
|
{
|
||||||
Pout << "id_lammps_[" << i << "]=" << id_lammps_[i] << " - "<<endl;
|
Pout << couplingStep_ << "st id_lammps_[" << i << "]=" << id_lammps_[i] << " - "<<endl;
|
||||||
}else{
|
}else{
|
||||||
Pout << "id_lammps_sync[" << i << "]=" << id_lammps_sync[i] << " - "<<endl;
|
Pout << couplingStep_ << "st id_lammps_sync[" << i << "]=" << id_lammps_sync[i] << " - "<<endl;
|
||||||
}
|
}
|
||||||
}*/
|
}*/
|
||||||
/*for (int i = 0; i < nlocal_lammps_*3; i++)
|
/*for (int i = 0; i < nlocal_lammps_*3; i++)
|
||||||
{
|
{
|
||||||
Pout << "id_lammps_vec_[" << i << "]=" << id_lammps_vec_[i] << " - "<<endl;
|
Pout << couplingStep_ << "st id_lammps_vec_[" << i << "]=" << id_lammps_vec_[i] << " - "<<endl;
|
||||||
}*/
|
}*/
|
||||||
/*Info << "FOAM "<< endl;
|
/*Info << "FOAM "<< endl;
|
||||||
for (int i = 0; i < nlocal_foam_; i++)
|
for (int i = 0; i < nlocal_foam_; i++)
|
||||||
{
|
{
|
||||||
Pout << "id_foam_[" << i << "]=" << id_foam_[i] << " - "<<endl;
|
Pout << couplingStep_ << "st id_foam_[" << i << "]=" << id_foam_[i] << " - "<<endl;
|
||||||
}*/
|
}*/
|
||||||
/*for (int i = 0; i < nlocal_foam_*3; i++)
|
/*for (int i = 0; i < nlocal_foam_*3; i++)
|
||||||
{
|
{
|
||||||
Pout << "id_foam_vec_[" << i << "]=" << id_foam_vec_[i] << " - "<<endl;
|
Pout << couplingStep_ << "st id_foam_vec_[" << i << "]=" << id_foam_vec_[i] << " - "<<endl;
|
||||||
}*/
|
}*/
|
||||||
Pout << couplingStep_ << "st nlocal_lammps_=" << nlocal_lammps_ << endl;
|
Pout << couplingStep_ << "st nlocal_lammps_=" << nlocal_lammps_ << endl;
|
||||||
Pout << couplingStep_ << "st nlocal_foam_=" << nlocal_foam_ << endl;
|
Pout << couplingStep_ << "st nlocal_foam_=" << nlocal_foam_ << endl;
|
||||||
|
|
||||||
// communicate lmp->foam
|
// correct mapping
|
||||||
particleCloud_.clockM().start(11,"setup_Comm");
|
particleCloud_.clockM().start(11,"setup_Comm");
|
||||||
if(firstRun_)
|
if(firstRun_)
|
||||||
{
|
{
|
||||||
@ -531,14 +478,6 @@ void Foam::twoWayM2M::syncIDs() const
|
|||||||
|
|
||||||
void Foam::twoWayM2M::locateParticle() const
|
void Foam::twoWayM2M::locateParticle() const
|
||||||
{
|
{
|
||||||
//?=======
|
|
||||||
// if I do not creat new communicators it fails at liggghts porcessor transfer!
|
|
||||||
// this should probably not be done that often!!!
|
|
||||||
lmp2foam_ = new Many2Many(MPI_COMM_WORLD);
|
|
||||||
lmp2foam_vec_ = new Many2Many(MPI_COMM_WORLD);
|
|
||||||
foam2lmp_vec_ = new Many2Many(MPI_COMM_WORLD);
|
|
||||||
//?=======
|
|
||||||
|
|
||||||
int nop = particleCloud_.numberOfParticles();
|
int nop = particleCloud_.numberOfParticles();
|
||||||
|
|
||||||
// realloc array of lost particles
|
// realloc array of lost particles
|
||||||
@ -590,9 +529,10 @@ void Foam::twoWayM2M::locateParticle() const
|
|||||||
pos = vector(pos_lammps_[i][0],pos_lammps_[i][1],pos_lammps_[i][2]);
|
pos = vector(pos_lammps_[i][0],pos_lammps_[i][1],pos_lammps_[i][2]);
|
||||||
searchCellID = -1;
|
searchCellID = -1;
|
||||||
//Pout << "stage1 looking for particle pos="<< pos << endl;
|
//Pout << "stage1 looking for particle pos="<< pos << endl;
|
||||||
|
|
||||||
cellID = particleCloud_.locateM().findSingleCell(pos,searchCellID);
|
cellID = particleCloud_.locateM().findSingleCell(pos,searchCellID);
|
||||||
|
|
||||||
|
point oldPos(pos_foam_[nlocal_foam_*3+0],pos_foam_[nlocal_foam_*3+1],pos_foam_[nlocal_foam_*3+2]);
|
||||||
|
|
||||||
// found particle on cfd proc
|
// found particle on cfd proc
|
||||||
if (cellID >= 0)
|
if (cellID >= 0)
|
||||||
{
|
{
|
||||||
@ -608,7 +548,7 @@ void Foam::twoWayM2M::locateParticle() const
|
|||||||
cellID_foam_[nlocal_foam_] = cellID;
|
cellID_foam_[nlocal_foam_] = cellID;
|
||||||
|
|
||||||
nlocal_foam_ += 1;
|
nlocal_foam_ += 1;
|
||||||
//Pout << "stage1 found particle at pos=" << pos << endl;
|
//Pout << couplingStep_ << "st stage1 found particle at pos=" << pos << " ,id_lammps_[i]=" << id_lammps_[i] << endl;
|
||||||
}
|
}
|
||||||
else
|
else
|
||||||
{
|
{
|
||||||
@ -618,7 +558,77 @@ void Foam::twoWayM2M::locateParticle() const
|
|||||||
lost_pos_[nlocal_foam_lost_*3+j] = pos[j];
|
lost_pos_[nlocal_foam_lost_*3+j] = pos[j];
|
||||||
|
|
||||||
nlocal_foam_lost_ += 1;
|
nlocal_foam_lost_ += 1;
|
||||||
//Pout << "cellID="<< cellID << " lost particle id="<< id_lammps_[i] <<" at pos=" << pos << endl;
|
//Pout << couplingStep_ << "st cellID="<< cellID << " lost particle id="<< id_lammps_[i] <<" at pos=" << pos << endl;
|
||||||
|
|
||||||
|
// find out where particle has migrated (must have passed a CFD proc border)
|
||||||
|
/*point newPos=pos;
|
||||||
|
label nearestFace = particleCloud_.locateM().intersection(oldPos,newPos);
|
||||||
|
Pout << "nearest face=" << nearestFace << endl;
|
||||||
|
|
||||||
|
// If we hit a boundary face
|
||||||
|
if (nearestFace >= particleCloud_.mesh().nInternalFaces())
|
||||||
|
{
|
||||||
|
Pout << " face=" << nearestFace << " , is a boundary face!" << endl;
|
||||||
|
}*/
|
||||||
|
|
||||||
|
/* // probably useful proc stuff from Cloud.C
|
||||||
|
|
||||||
|
const polyBoundaryMesh& pbm = pMesh().boundaryMesh();
|
||||||
|
const globalMeshData& pData = polyMesh_.globalData();
|
||||||
|
|
||||||
|
// Which patches are processor patches
|
||||||
|
const labelList& procPatches = pData.processorPatches();
|
||||||
|
|
||||||
|
// Indexing of patches into the procPatches list
|
||||||
|
const labelList& procPatchIndices = pData.processorPatchIndices();
|
||||||
|
|
||||||
|
// Indexing of equivalent patch on neighbour processor into the
|
||||||
|
// procPatches list on the neighbour
|
||||||
|
const labelList& procPatchNeighbours = pData.processorPatchNeighbours();
|
||||||
|
|
||||||
|
// Which processors this processor is connected to
|
||||||
|
const labelList& neighbourProcs = pData[Pstream::myProcNo()];
|
||||||
|
|
||||||
|
// Indexing from the processor number into the neighbourProcs list
|
||||||
|
labelList neighbourProcIndices(Pstream::nProcs(), -1);
|
||||||
|
|
||||||
|
forAll(neighbourProcs, i)
|
||||||
|
{
|
||||||
|
neighbourProcIndices[neighbourProcs[i]] = i;
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
// If we are running in parallel and the particle is on a
|
||||||
|
// boundary face
|
||||||
|
if (Pstream::parRun() && p.face() >= pMesh().nInternalFaces())
|
||||||
|
{
|
||||||
|
label patchI = pbm.whichPatch(p.face());
|
||||||
|
|
||||||
|
// ... and the face is on a processor patch
|
||||||
|
// prepare it for transfer
|
||||||
|
if (procPatchIndices[patchI] != -1)
|
||||||
|
{
|
||||||
|
label n = neighbourProcIndices
|
||||||
|
[
|
||||||
|
refCast<const processorPolyPatch>
|
||||||
|
(
|
||||||
|
pbm[patchI]
|
||||||
|
).neighbProcNo()
|
||||||
|
];
|
||||||
|
|
||||||
|
p.prepareForParallelTransfer(patchI, td);
|
||||||
|
|
||||||
|
particleTransferLists[n].append(this->remove(&p));
|
||||||
|
|
||||||
|
patchIndexTransferLists[n].append
|
||||||
|
(
|
||||||
|
procPatchNeighbours[patchI]
|
||||||
|
);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
*/
|
||||||
|
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
particleCloud_.clockM().stop("locate_Stage1");
|
particleCloud_.clockM().stop("locate_Stage1");
|
||||||
|
|||||||
@ -118,6 +118,12 @@ public:
|
|||||||
vector& position,
|
vector& position,
|
||||||
label& oldCellID
|
label& oldCellID
|
||||||
) const = 0;
|
) const = 0;
|
||||||
|
|
||||||
|
virtual label intersection
|
||||||
|
(
|
||||||
|
const point& pStart,
|
||||||
|
const point& pEnd
|
||||||
|
) const {return -1;};
|
||||||
};
|
};
|
||||||
|
|
||||||
|
|
||||||
|
|||||||
@ -63,12 +63,12 @@ turboEngineSearch::turboEngineSearch
|
|||||||
locateModel(dict,sm),
|
locateModel(dict,sm),
|
||||||
propsDict_(dict.subDict(typeName + "Props")),
|
propsDict_(dict.subDict(typeName + "Props")),
|
||||||
treeSearch_(propsDict_.lookup("treeSearch")),
|
treeSearch_(propsDict_.lookup("treeSearch")),
|
||||||
|
bb_(particleCloud_.mesh().points(),false),
|
||||||
#ifdef version16ext
|
#ifdef version16ext
|
||||||
searchEngine_(particleCloud_.mesh(),false), //(particleCloud_.mesh(),faceDecomp_)
|
searchEngine_(particleCloud_.mesh(),false) //(particleCloud_.mesh(),faceDecomp_)
|
||||||
#elif defined(version21)
|
#elif defined(version21)
|
||||||
searchEngine_(particleCloud_.mesh(),polyMesh::FACEPLANES), // FACEPLANES or FACECENTRETETS; FACEDIAGTETS not stable
|
searchEngine_(particleCloud_.mesh(),polyMesh::FACEPLANES) // FACEPLANES or FACECENTRETETS; FACEDIAGTETS not stable
|
||||||
#endif
|
#endif
|
||||||
bb_(particleCloud_.mesh().points(),false)
|
|
||||||
{}
|
{}
|
||||||
|
|
||||||
|
|
||||||
|
|||||||
@ -65,10 +65,12 @@ private:
|
|||||||
|
|
||||||
Switch treeSearch_;
|
Switch treeSearch_;
|
||||||
|
|
||||||
meshSearch searchEngine_;
|
|
||||||
|
|
||||||
boundBox bb_;
|
boundBox bb_;
|
||||||
|
|
||||||
|
protected:
|
||||||
|
|
||||||
|
meshSearch searchEngine_;
|
||||||
|
|
||||||
public:
|
public:
|
||||||
|
|
||||||
//- Runtime type information
|
//- Runtime type information
|
||||||
|
|||||||
@ -85,6 +85,20 @@ label turboEngineSearchM2M::findCell
|
|||||||
return 1;
|
return 1;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
label turboEngineSearchM2M::intersection
|
||||||
|
(
|
||||||
|
const point& pStart,
|
||||||
|
const point& pEnd
|
||||||
|
) const
|
||||||
|
{
|
||||||
|
// find intersection with boundary
|
||||||
|
//pointIndexHit hit=searchEngine_.intersection(pStart,pEnd);
|
||||||
|
//Info << "hit.index()=" << hit.index()<< endl;
|
||||||
|
|
||||||
|
//return searchEngine_.findNearestBoundaryFace(pStart);
|
||||||
|
return searchEngine_.intersection(pStart,pEnd).index();
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
|
||||||
|
|
||||||
|
|||||||
@ -89,6 +89,12 @@ public:
|
|||||||
int size
|
int size
|
||||||
) const;
|
) const;
|
||||||
|
|
||||||
|
label intersection
|
||||||
|
(
|
||||||
|
const point& pStart,
|
||||||
|
const point& pEnd
|
||||||
|
) const;
|
||||||
|
|
||||||
};
|
};
|
||||||
|
|
||||||
|
|
||||||
|
|||||||
Reference in New Issue
Block a user