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185 lines
4.5 KiB
Plaintext
185 lines
4.5 KiB
Plaintext
ChemCell (1 Nov 2004)
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# Lotka-Volterra reactions
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seed 3998694
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volume 1.0e-11
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species prey
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species predator
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species food
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count prey 1000
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count predator 1000
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count food 1000
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reaction 1 food prey 1.0e10 prey prey food
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reaction 2 prey predator 1.0e10 predator predator
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reaction 3 predator 1.0
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stats 1.0
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run_style gillespie
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run 100.0
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Domain:
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global size in xyz = 0 0 0
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Particles:
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number of 3d species = 3
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min/max 3d diffusivities = 0 0
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number of 2d species = 0
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initial particles = 0
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Move:
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Reactions:
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number of 1-reactant reactions = 1
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min/max 1-reactant rates = 1 1
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number of 2-reactant reactions = 2
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min/max 2-reactant rates = 1e+10 1e+10
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min/max reaction distance = 0 0
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max/min reaction probabilities = nan 0
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Memory usage in Mbyte/proc (ave/max/min)
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parts = 0 0 0
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bins = 0 0 0
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surfs = 0 0 0
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total = 0 0 0
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Step Time prey predator food
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0 0 1000 1000 1000
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4692 1.00009 597 1578 1000
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7799 2.00172 310 1163 1000
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9645 3.00015 338 776 1000
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11461 4.00011 602 589 1000
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14379 5.0001 965 857 1000
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18851 6.00007 748 1454 1000
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22512 7.00046 370 1255 1000
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24955 8.00074 403 930 1000
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27100 9 482 757 1000
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29691 10.0001 761 794 1000
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33309 11.0005 786 1155 1000
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36960 12 504 1224 1000
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39734 13.0004 496 965 1000
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42491 14.0002 617 900 1000
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45457 15.0004 702 953 1000
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48965 16 634 1175 1000
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52213 17 430 1065 1000
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54659 18.0003 445 902 1000
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57045 19.0009 631 778 1000
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60145 20.0003 716 991 1000
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63486 21.0001 588 1071 1000
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66522 22.0003 591 1002 1000
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69455 23.0001 605 981 1000
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72394 24.0006 604 951 1000
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75265 25.0013 659 934 1000
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78598 26.0004 697 1050 1000
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81666 27.0003 485 1061 1000
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84221 28.0001 597 904 1000
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87384 29.0006 727 1030 1000
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90855 30 625 1066 1000
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94074 31.0002 641 1118 1000
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97342 32.0001 600 1082 1000
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100200 33.0001 548 956 1000
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102869 34.0002 543 904 1000
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105514 35.0002 619 834 1000
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108533 36.0005 651 1036 1000
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111683 37.0004 610 1052 1000
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114757 38.0012 470 1060 1000
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117160 39.0017 412 879 1000
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119493 40.0001 663 720 1000
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122836 41.0001 843 1040 1000
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126736 42 558 1256 1000
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129669 43.0009 429 1038 1000
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131998 44.0006 518 781 1000
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134494 45.0006 715 762 1000
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138030 46 713 1166 1000
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141338 47.0002 496 1160 1000
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143924 48.0004 366 931 1000
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145935 49.0019 482 656 1000
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148272 50.0001 868 685 1000
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152460 51.0006 996 1287 1000
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157045 52.0003 471 1487 1000
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159549 53.0007 271 994 1000
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161246 54.0001 405 613 1000
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163326 55.0002 900 594 1000
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168218 56.0002 1112 1485 1000
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172925 57.0006 360 1642 1000
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175150 58.0022 213 953 1000
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176678 59 409 584 1000
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178951 60.0002 893 631 1000
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183064 61.0004 935 1288 1000
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187196 62.0001 403 1454 1000
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189482 63.0007 289 911 1000
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191356 64.0014 494 634 1000
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193721 65 897 670 1000
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198165 66.0002 987 1395 1000
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202535 67.0001 426 1495 1000
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205000 68.0012 241 978 1000
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206544 69.0007 348 591 1000
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208490 70.0002 785 549 1000
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212330 71.0001 1162 1160 1000
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217128 72.0001 460 1597 1000
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219694 73.0001 259 1005 1000
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221459 74.0001 435 592 1000
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223616 75.0001 814 602 1000
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227560 76.0001 1127 1174 1000
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232496 77.0006 451 1655 1000
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235034 78.0002 252 1021 1000
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236607 79.0003 352 568 1000
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238504 80.0003 807 575 1000
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242326 81.0001 1029 1097 1000
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246831 82.0001 493 1513 1000
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249606 83 295 1042 1000
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251351 84.0003 414 631 1000
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253495 85.0001 834 587 1000
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257467 86 1158 1163 1000
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262343 87.0003 444 1588 1000
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264752 88.0001 250 1007 1000
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266292 89.0003 343 583 1000
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268051 90.0015 761 490 1000
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271888 91 1238 1099 1000
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277508 92.0002 487 1880 1000
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280262 93 201 1063 1000
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281699 94.0006 266 573 1000
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283173 95.0004 612 432 1000
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286341 96.0006 1320 867 1000
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292092 97.0003 575 1928 1000
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295174 98.0015 180 1211 1000
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296648 99.0003 211 635 1000
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297937 100.003 523 387 1000
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Loop time of 2.9678 on 1 procs for 297937 steps
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Move time (%) = 0 (0)
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Migrt time (%) = 0 (0)
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React time (%) = 0.996689 (33.5835)
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RComm time (%) = 0 (0)
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Outpt time (%) = 1.04967 (35.3688)
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Balnc time (%) = 0 (0)
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Other time (%) = 0.921435 (31.0478)
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Nlocal: 0 ave 0 max 0 min
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Histogram: 1 0 0 0 0 0 0 0 0 0
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Nghost: 0 ave 0 max 0 min
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Histogram: 1 0 0 0 0 0 0 0 0 0
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Move statistics (total & per-step):
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moves = 0 0
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BC collide = 0 0
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tri checks = 0 0
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relect hits = 0 0
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near hits = 0 0
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stick hits = 0 0
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far hits = 0 0
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thru hits = 0 0
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Reaction statistics (total & per-step):
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overlaps = 0 0
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reactions = 297937 1
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count of each reaction: (1 98790) (2 99267) (3 99880)
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Memory usage in Mbyte/proc (ave/max/min)
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parts = 0 0 0
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bins = 0 0 0
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surfs = 0 0 0
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total = 0 0 0
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Equivalance map of species & type
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map prey 1
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map predator 2
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map food 3
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