#include "createRDeltaT.H"

Info<< "Reading thermophysical properties\n" << endl;
autoPtr<fluidReactionThermo> pThermo(fluidReactionThermo::New(mesh));
fluidReactionThermo& thermo = pThermo();
thermo.validate(args.executable(), "h", "e");

basicSpecieMixture& composition = thermo.composition();
PtrList<volScalarField>& Y = composition.Y();

Info<< "Creating field rho\n" << endl;
volScalarField rho
(
    IOobject
    (
        "rho",
        runTime.timeName(),
        mesh
    ),
    thermo.rho()
);

volScalarField& p = thermo.p();

Info<< "\nReading field U\n" << endl;
volVectorField U
(
    IOobject
    (
        "U",
        runTime.timeName(),
        mesh,
        IOobject::MUST_READ,
        IOobject::AUTO_WRITE
    ),
    mesh
);

#include "compressibleCreatePhi.H"

Info<< "Creating turbulence model\n" << endl;
autoPtr<compressible::momentumTransportModel> turbulence
(
    compressible::momentumTransportModel::New
    (
        rho,
        U,
        phi,
        thermo
    )
);

Info<< "Creating thermophysical transport model\n" << endl;
autoPtr<fluidReactionThermophysicalTransportModel>
thermophysicalTransport
(
    fluidReactionThermophysicalTransportModel::New
    (
        turbulence(),
        thermo
    )
);

Info<< "Creating combustion model\n" << endl;
autoPtr<combustionModel> combustion
(
    combustionModel::New(thermo, turbulence())
);

Info<< "Creating field dpdt\n" << endl;
volScalarField dpdt
(
    IOobject
    (
        "dpdt",
        runTime.timeName(),
        mesh
    ),
    mesh,
    dimensionedScalar(p.dimensions()/dimTime, 0)
);

Info<< "Creating field kinetic energy K\n" << endl;
volScalarField K("K", 0.5*magSqr(U));

#include "readGravitationalAcceleration.H"

pressureReference pressureReference
(
    p,
    pimple.dict(),
    thermo.incompressible()
);

mesh.setFluxRequired(p.name());

multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;

forAll(Y, i)
{
    fields.add(Y[i]);
}
fields.add(thermo.he());

#include "createMRF.H"
#include "createClouds.H"
#include "createSurfaceFilmModel.H"
#include "createFvModels.H"
#include "createFvConstraints.H"
#include "checkRadiationModel.H"
