Sprucing up the tutorials folder and adding -dict to "collapseEdges"

Patch provided by Bruno Santos
Resolves patch application request http://www.openfoam.org/mantisbt/view.php?id=2015

tutorials/multiphase/interDyMFoam/ras/DTCHull/Allrun

@@ -4,12 +4,6 @@ cd ${0%/*} || exit 1    # Run from this directory
 # Source tutorial run functions
 . $WM_PROJECT_DIR/bin/tools/RunFunctions
 
-runRefineMesh ()
-{
-    echo "Running refineMesh on $PWD"
-    refineMesh -dict system/refineMeshDict -overwrite > log.refineMesh 2>&1
-}
-
 # copy DTC hull surface from resources folder
 cp $FOAM_TUTORIALS/resources/geometry/DTC-scaled.stl.gz constant/triSurface/
 
@@ -17,17 +11,13 @@ runApplication surfaceFeatureExtract
 
 runApplication blockMesh
 
-i=1
-if [ -f log.topoSet.6 ] ; then
-   i=7
-fi
-while [ "$i" -lt 7 ] ; do
-    cp system/topoSetDict.${i} system/topoSetDict
-    runApplication topoSet
-    runRefineMesh
-    mv log.topoSet log.topoSet.$i
-    mv log.refineMesh log.refineMesh.$i
-    i=$(expr $i + 1)
+for i in 1 2 3 4 5 6
+do
+    runApplication -s $i \
+        topoSet -dict system/topoSetDict.${i}
+
+    runApplication -s $i \
+        refineMesh -dict system/refineMeshDict -overwrite
 done
 
 runApplication snappyHexMesh -overwrite

tutorials/multiphase/interFoam/les/nozzleFlow2D/Allrun

@@ -7,28 +7,15 @@ cd ${0%/*} || exit 1    # Run from this directory
 # Get application name
 application=`getApplication`
 
-runRefineMesh ()
-{
-    echo "Running refineMesh on $PWD"
-    refineMesh -dict system/refineMeshDict > log.refineMesh 2>&1
-}
-
 runApplication blockMesh
 
-i=1
-if [ -f log.topoSet ] ; then
-   i=3
-fi
-while [ "$i" -lt 3 ] ; do
-    if [ -f log.topoSet ] ; then
-        mv log.topoSet log.topoSet.1
-    fi
-    cp system/topoSetDict.${i} system/topoSetDict
-    runApplication topoSet
-    runRefineMesh
-    cp -r 1e-08/polyMesh/* constant/polyMesh
-    rm -rf 1e-08
-    i=`expr $i + 1`
+for i in 1 2
+do
+    runApplication -s $i \
+        topoSet -dict system/topoSetDict.${i}
+
+    runApplication -s $i \
+        refineMesh -dict system/refineMeshDict -overwrite
 done
 
 runApplication $application

tutorials/multiphase/interFoam/ras/DTCHull/Allrun

@@ -4,12 +4,6 @@ cd ${0%/*} || exit 1    # Run from this directory
 # Source tutorial run functions
 . $WM_PROJECT_DIR/bin/tools/RunFunctions
 
-runRefineMesh ()
-{
-    echo "Running refineMesh on $PWD"
-    refineMesh -dict system/refineMeshDict -overwrite > log.refineMesh 2>&1
-}
-
 # copy DTC hull surface from resources folder
 cp $FOAM_TUTORIALS/resources/geometry/DTC-scaled.stl.gz constant/triSurface/
 
@@ -17,17 +11,13 @@ runApplication surfaceFeatureExtract
 
 runApplication blockMesh
 
-i=1
-if [ -f log.topoSet.6 ] ; then
-   i=7
-fi
-while [ "$i" -lt 7 ] ; do
-    cp system/topoSetDict.${i} system/topoSetDict
-    runApplication topoSet
-    runRefineMesh
-    mv log.topoSet log.topoSet.$i
-    mv log.refineMesh log.refineMesh.$i
-    i=$(expr $i + 1)
+for i in 1 2 3 4 5 6
+do
+    runApplication -s $i \
+        topoSet -dict system/topoSetDict.${i}
+
+    runApplication -s $i \
+        refineMesh -dict system/refineMeshDict -overwrite
 done
 
 runApplication snappyHexMesh -overwrite

tutorials/multiphase/interPhaseChangeDyMFoam/propeller/Allrun.pre

@@ -25,9 +25,7 @@ runApplication renumberMesh -overwrite
 # - generate face/cell sets and zones
 
 #runApplication setSet -batch createInletOutletSets.setSet
-#mv log.setSet log.createInletOutletSets.setSet
 runApplication topoSet -dict system/createInletOutletSets.topoSetDict
-#mv log.topoSet log.createInletOutletSets.topoSet
 
 
 # - create the inlet/outlet and AMI patches
@@ -35,7 +33,7 @@ runApplication topoSet -dict system/createInletOutletSets.topoSetDict
 runApplication createPatch -overwrite
 
 
-# - test by running moveDynamicMes
+# - test by running moveDynamicMesh
 #runApplication moveDynamicMesh -checkAMI
 
 

tutorials/multiphase/potentialFreeSurfaceDyMFoam/oscillatingBox/Allrun

@@ -8,10 +8,14 @@ cd ${0%/*} || exit 1    # Run from this directory
 application=`getApplication`
 
 runApplication blockMesh
-runApplication topoSet
-mv log.topoSet log.topoSet.1
+
+runApplication -s 1  topoSet
+
 runApplication subsetMesh -overwrite c0 -patch floatingObject
-runApplication topoSet -dict system/topoSetDict-selectBottom
+
+runApplication -s selectBottom \
+    topoSet -dict system/topoSetDict-selectBottom
+
 runApplication createPatch -overwrite
 
 cp -r 0.org 0 > /dev/null 2>&1