When snappyHexMesh is run in parallel it re-balances the mesh during refinement
and layer addition by redistribution which requires a decomposition method
that operates in parallel, e.g. hierachical or ptscotch. decomposePar uses a
decomposition method which operates in serial e.g. hierachical but NOT
ptscotch. In order to run decomposePar followed by snappyHexMesh in parallel it
has been necessary to change the method specified in decomposeParDict but now
this is avoided by separately specifying the decomposition and distribution
methods, e.g. in the incompressible/simpleFoam/motorBike case:
numberOfSubdomains 6;
decomposer hierarchical;
distributor ptscotch;
hierarchicalCoeffs
{
n (3 2 1);
order xyz;
}
The distributor entry is also used for run-time mesh redistribution, e.g. in the
multiphase/interFoam/RAS/floatingObject case re-distribution for load-balancing
is enabled in constant/dynamicMeshDict:
distributor
{
type distributor;
libs ("libfvMeshDistributors.so");
redistributionInterval 10;
}
which uses the distributor specified in system/decomposeParDict:
distributor hierarchical;
This rationalisation provides the structure for development of mesh
redistribution and load-balancing.
Basic support is now provided for dynamic mesh redistribution, particularly for
load-balancing. The mesh distributor is selected in the optional 'distributor'
entry in dynamicMeshDict, for example in the
multiphase/interFoam/RAS/floatingObject tutorial case when run in parallel using
the new Allrun-parallel script
distributor
{
type decomposer;
libs ("libfvMeshDistributors.so");
redistributionInterval 10;
}
in which the 'decomposer' form of redistribution is selected to call the mesh
decomposition method specified in decomposeParDict to re-decompose the mesh for
redistribution. The redistributionInterval entry specifies how frequently mesh
redistribution takes place, in the above every 10th time-step. An optional
maxImbalance entry is also provided to control redistribution based on the cell
distribution imbalance:
Class
Foam::fvMeshDistributor::decomposer
Description
Dynamic mesh redistribution using the decomposer
Usage
Example of single field based refinement in all cells:
\verbatim
distributor
{
type decomposer;
libs ("libfvMeshDistributors.so");
// How often to redistribute
redistributionInterval 10;
// Maximum fractional cell distribution imbalance
// before rebalancing
maxImbalance 0.1;
}
\endverbatim
Currently mesh refinement/unrefinement and motion with redistribution is
supported but many aspects of OpenFOAM are not yet and will require further
development, in particular fvModels and Lagrangian.
Also only the geometry-based simple and hierarchical decomposition method are
well behaved for redistribution, scotch and ptScotch cause dramatic changes in
mesh distribution with a corresponding heavy communications overhead limiting
their usefulness or at least the frequency with which they should be called to
redistribute the mesh.
The surfaceVectorField Uf is used instead of the flux field phi for ddtPhiCorr
in moving mesh cases to handle linear and rotating motion and must mapped from
the volVectorField U to new faces created by cell splitting or merging in mesh
refinement/unrefinement.
The floatingObject tutorial has been update to demonstrate this functionality by
adding the following topoChanger entry to dynamicMeshDict:
topoChanger
{
type refiner;
libs ("libfvMeshTopoChangers.so");
// How often to refine
refineInterval 1;
// Field to be refinement on
field alpha.water;
// Refine field in between lower..upper
lowerRefineLevel 0.001;
upperRefineLevel 0.999;
// Have slower than 2:1 refinement
nBufferLayers 1;
// Refine cells only up to maxRefinement levels
maxRefinement 1;
// Stop refinement if maxCells reached
maxCells 200000;
// Flux field and corresponding velocity field. Fluxes on changed
// faces get recalculated by interpolating the velocity. Use 'none'
// on surfaceScalarFields that do not need to be reinterpolated.
correctFluxes
(
(phi none)
(nHatf none)
(rhoPhi none)
(alphaPhi.water none)
(meshPhi none)
(ghf none)
);
// Write the refinement level as a volScalarField
dumpLevel true;
}
Note that currently only single rigid body motion is supported (but multi-body
support will be added shortly) and the Crank-Nicolson scheme is not supported.
Mesh motion and topology change are now combinable run-time selectable options
within fvMesh, replacing the restrictive dynamicFvMesh which supported only
motion OR topology change.
All solvers which instantiated a dynamicFvMesh now instantiate an fvMesh which
reads the optional constant/dynamicFvMeshDict to construct an fvMeshMover and/or
an fvMeshTopoChanger. These two are specified within the optional mover and
topoChanger sub-dictionaries of dynamicFvMeshDict.
When the fvMesh is updated the fvMeshTopoChanger is first executed which can
change the mesh topology in anyway, adding or removing points as required, for
example for automatic mesh refinement/unrefinement, and all registered fields
are mapped onto the updated mesh. The fvMeshMover is then executed which moved
the points only and calculates the cell volume change and corresponding
mesh-fluxes for conservative moving mesh transport. If multiple topological
changes or movements are required these would be combined into special
fvMeshMovers and fvMeshTopoChangers which handle the processing of a list of
changes, e.g. solidBodyMotionFunctions:multiMotion.
The tutorials/multiphase/interFoam/laminar/sloshingTank3D3DoF case has been
updated to demonstrate this new functionality by combining solid-body motion
with mesh refinement/unrefinement:
/*--------------------------------*- C++ -*----------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | Website: https://openfoam.org
\\ / A nd | Version: dev
\\/ M anipulation |
\*---------------------------------------------------------------------------*/
FoamFile
{
format ascii;
class dictionary;
location "constant";
object dynamicMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
mover
{
type motionSolver;
libs ("libfvMeshMovers.so" "libfvMotionSolvers.so");
motionSolver solidBody;
solidBodyMotionFunction SDA;
CofG (0 0 0);
lamda 50;
rollAmax 0.2;
rollAmin 0.1;
heaveA 4;
swayA 2.4;
Q 2;
Tp 14;
Tpn 12;
dTi 0.06;
dTp -0.001;
}
topoChanger
{
type refiner;
libs ("libfvMeshTopoChangers.so");
// How often to refine
refineInterval 1;
// Field to be refinement on
field alpha.water;
// Refine field in between lower..upper
lowerRefineLevel 0.001;
upperRefineLevel 0.999;
// Have slower than 2:1 refinement
nBufferLayers 1;
// Refine cells only up to maxRefinement levels
maxRefinement 1;
// Stop refinement if maxCells reached
maxCells 200000;
// Flux field and corresponding velocity field. Fluxes on changed
// faces get recalculated by interpolating the velocity. Use 'none'
// on surfaceScalarFields that do not need to be reinterpolated.
correctFluxes
(
(phi none)
(nHatf none)
(rhoPhi none)
(alphaPhi.water none)
(meshPhi none)
(meshPhi_0 none)
(ghf none)
);
// Write the refinement level as a volScalarField
dumpLevel true;
}
// ************************************************************************* //
Note that currently this is the only working combination of mesh-motion with
topology change within the new framework and further development is required to
update the set of topology changers so that topology changes with mapping are
separated from the mesh-motion so that they can be combined with any of the
other movements or topology changes in any manner.
All of the solvers and tutorials have been updated to use the new form of
dynamicMeshDict but backward-compatibility was not practical due to the complete
reorganisation of the mesh change structure.
for consistency with the regionToCell topo set source and splitMeshRegions and
provides more logical extension to the multiple and outside point variants insidePoints,
outsidePoint and outsidePoints.
The mesh in the upstream region of this case has been refined back to
its original density. This restores the wave propagation behaviour
through this region.
It is now possible to use waveVelocity and waveAlpha boundary conditions
in cases in which the waves generate localised flow reversals along the
boundary. This means waves can be speficied at arbitrary directions and
with zero mean flow. Previously and integral approach, similar to
flowRateOutlet, was used, which was only correct when the direction of
wave propagation was aligned with the boundary normal.
This improvement has been achieved by reformulating the waveVelocity and
waveAlpha boundary conditions in terms of a new fixedValueInletOutlet
boundary condition type. This condition enforces a fixed value in all
cases except that of advection terms in the presence of outflow. In this
configuration a gradient condition is applied that will relax towards
the desired fixed value.
The wavePressure boundary condition has been removed, as it is no longer
necessary or advisable to locally switch between velocity and pressure
formulations along a wave boundary. Wave boundaries should now have the
general fixedFluxPressure or fixedFluxExtrapolatedPressure conditions
applied to the pressure field.
Two new tutorial cases have been created to demonstrate the new
functionality. The multiphase/interFoam/laminar/wave3D case demonstrates
wave generation with zero mean flow and at arbitrary angles to the
boundaries, and incompressible/pimpleFoam/RAS/waveSubSurface
demonstrates usage for sub-surface problems.
to the <case>/<time>/uniform or <case>/<processor>/<time>/uniform directory.
Adding a new form of IOdictionary for this purpose allows significant
simplification and rationalisation of regIOobject::writeObject, removing the
need for explicit treatment of different file types.
to provide a single consistent code and user interface to the specification of
physical properties in both single-phase and multi-phase solvers. This redesign
simplifies usage and reduces code duplication in run-time selectable solver
options such as 'functionObjects' and 'fvModels'.
* physicalProperties
Single abstract base-class for all fluid and solid physical property classes.
Physical properties for a single fluid or solid within a region are now read
from the 'constant/<region>/physicalProperties' dictionary.
Physical properties for a phase fluid or solid within a region are now read
from the 'constant/<region>/physicalProperties.<phase>' dictionary.
This replaces the previous inconsistent naming convention of
'transportProperties' for incompressible solvers and
'thermophysicalProperties' for compressible solvers.
Backward-compatibility is provided by the solvers reading
'thermophysicalProperties' or 'transportProperties' if the
'physicalProperties' dictionary does not exist.
* phaseProperties
All multi-phase solvers (VoF and Euler-Euler) now read the list of phases and
interfacial models and coefficients from the
'constant/<region>/phaseProperties' dictionary.
Backward-compatibility is provided by the solvers reading
'thermophysicalProperties' or 'transportProperties' if the 'phaseProperties'
dictionary does not exist. For incompressible VoF solvers the
'transportProperties' is automatically upgraded to 'phaseProperties' and the
two 'physicalProperties.<phase>' dictionary for the phase properties.
* viscosity
Abstract base-class (interface) for all fluids.
Having a single interface for the viscosity of all types of fluids facilitated
a substantial simplification of the 'momentumTransport' library, avoiding the
need for a layer of templating and providing total consistency between
incompressible/compressible and single-phase/multi-phase laminar, RAS and LES
momentum transport models. This allows the generalised Newtonian viscosity
models to be used in the same form within laminar as well as RAS and LES
momentum transport closures in any solver. Strain-rate dependent viscosity
modelling is particularly useful with low-Reynolds number turbulence closures
for non-Newtonian fluids where the effect of bulk shear near the walls on the
viscosity is a dominant effect. Within this framework it would also be
possible to implement generalised Newtonian models dependent on turbulent as
well as mean strain-rate if suitable model formulations are available.
* visosityModel
Run-time selectable Newtonian viscosity model for incompressible fluids
providing the 'viscosity' interface for 'momentumTransport' models.
Currently a 'constant' Newtonian viscosity model is provided but the structure
supports more complex functions of time, space and fields registered to the
region database.
Strain-rate dependent non-Newtonian viscosity models have been removed from
this level and handled in a more general way within the 'momentumTransport'
library, see section 'viscosity' above.
The 'constant' viscosity model is selected in the 'physicalProperties'
dictionary by
viscosityModel constant;
which is equivalent to the previous entry in the 'transportProperties'
dictionary
transportModel Newtonian;
but backward-compatibility is provided for both the keyword and model
type.
* thermophysicalModels
To avoid propagating the unnecessary constructors from 'dictionary' into the
new 'physicalProperties' abstract base-class this entire structure has been
removed from the 'thermophysicalModels' library. The only use for this
constructor was in 'thermalBaffle' which now reads the 'physicalProperties'
dictionary from the baffle region directory which is far simpler and more
consistent and significantly reduces the amount of constructor code in the
'thermophysicalModels' library.
* compressibleInterFoam
The creation of the 'viscosity' interface for the 'momentumTransport' models
allows the complex 'twoPhaseMixtureThermo' derived from 'rhoThermo' to be
replaced with the much simpler 'compressibleTwoPhaseMixture' derived from the
'viscosity' interface, avoiding the myriad of unused thermodynamic functions
required by 'rhoThermo' to be defined for the mixture.
Same for 'compressibleMultiphaseMixture' in 'compressibleMultiphaseInterFoam'.
This is a significant improvement in code and input consistency, simplifying
maintenance and further development as well as enhancing usability.
Henry G. Weller
CFD Direct Ltd.
and only needed if there is a name clash between entries in the source
specification and the set specification, e.g. "name":
{
name rotorCells;
type cellSet;
action new;
source zoneToCell;
sourceInfo
{
name cylinder;
}
}
topoSet is a more flexible and extensible replacement for setSet using standard
OpenFOAM dictionary input format rather than the limited command-line input
format developed specifically for setSet. This replacement allows for the
removal of a significant amount of code simplifying maintenance and the addition
of more topoSet sources.
With this change both
blockMesh -dict fineBlockMeshDict
blockMesh -dict system/fineBlockMeshDict
are supported, if the system/ path is not specified it is assumed
splitBaffles identifies baffle faces; i.e., faces on the mesh boundary
which share the exact same set of points as another boundary face. It
then splits the points to convert these faces into completely separate
boundary patches. This functionality was previously provided by calling
mergeOrSplitBaffles with the "-split" option.
mergeBaffles also identifes the duplicate baffle faces, but then merges
them, converting them into a single set of internal faces. This
functionality was previously provided by calling mergeOrSplitBaffles
without the "-split" option.
When using 'simple' or 'hierarchical' decomposition it is useful to slightly rotate a
coordinate-aligned block-mesh to improve the processor boundaries by avoiding
irregular cell distribution at those boundaries. The degree of slight rotation
is controlled by the 'delta' coefficient and a value of 0.001 is generally
suitable so to avoid unnecessary clutter in 'decomposeParDict' 'delta' now
defaults to this value.
The FOAM file format has not changed from version 2.0 in many years and so there
is no longer a need for the 'version' entry in the FoamFile header to be
required and to reduce unnecessary clutter it is now optional, defaulting to the
current file format 2.0.
the previous naming tan1, tan2, normal was non-intuitive and very confusing.
It was not practical to maintain backward compatibility but all tutorials and
example refineMeshDict files have been updated to provide examples of the
change.
The inside or outside region refinement level is now specified using the simple
"level <level>" entry in refinementRegions e.g.
refinementRegions
{
refinementBox
{
mode inside;
level 5;
}
}
rather than
refinementRegions
{
refinementBox
{
mode inside;
levels ((1E15 5));
}
}
where the spurious "1E15" number is not used and the '((...))' is unnecessary clutter.
so that they operate in the conventional manner in a right-handed coordinate
system:
//- Rotational transformation tensor about the x-axis by omega radians
// The rotation is defined in a right-handed coordinate system
// i.e. clockwise with respect to the axis from -ve to +ve
// (looking along the axis).
inline tensor Rx(const scalar& omega)
//- Rotational transformation tensor about the y-axis by omega radians
// The rotation is defined in a right-handed coordinate system
// i.e. clockwise with respect to the axis from -ve to +ve
// (looking along the axis).
inline tensor Ry(const scalar& omega)
//- Rotational transformation tensor about the z-axis by omega radians
// The rotation is defined in a right-handed coordinate system
// i.e. clockwise with respect to the axis from -ve to +ve
// (looking along the axis).
inline tensor Rz(const scalar& omega)
//- Rotational transformation tensor about axis a by omega radians
// The rotation is defined in a right-handed coordinate system
// i.e. clockwise with respect to the axis from -ve to +ve
// (looking along the axis).
inline tensor Ra(const vector& a, const scalar omega)
Description
Transform (translate, rotate, scale) a surface.
Usage
\b surfaceTransformPoints "\<transformations\>" \<input\> \<output\>
Supported transformations:
- \par translate=<translation vector>
Translational transformation by given vector
- \par rotate=(\<n1 vector\> \<n2 vector\>)
Rotational transformation from unit vector n1 to n2
- \par Rx=\<angle [deg] about x-axis\>
Rotational transformation by given angle about x-axis
- \par Ry=\<angle [deg] about y-axis\>
Rotational transformation by given angle about y-axis
- \par Rz=\<angle [deg] about z-axis\>
Rotational transformation by given angle about z-axis
- \par Ra=\<axis vector\> \<angle [deg] about axis\>
Rotational transformation by given angle about given axis
- \par scale=\<x-y-z scaling vector\>
Anisotropic scaling by the given vector in the x, y, z
coordinate directions
Example usage:
surfaceTransformPoints \
"translate=(-0.586 0 -0.156), \
Ry=3.485, \
translate=(0.586 0 0.156)" \
constant/geometry/w3_orig.stl constant/geometry/w3.stl
The transformation sequence is specified like a substitution string used by
Description
Transform (translate, rotate, scale) a surface.
The rollPitchYaw option takes three angles (degrees):
- roll (rotation about x) followed by
- pitch (rotation about y) followed by
- yaw (rotation about z)
The yawPitchRoll does yaw followed by pitch followed by roll.
Usage
\b surfaceTransformPoints "\<transformations\>" \<input\> \<output\>
Example usage:
surfaceTransformPoints \
"translate=(-0.586 0 -0.156), \
rollPitchYaw=(0 -3.485 0), \
translate=(0.586 0 0.156)" \
constant/geometry/w3_orig.stl constant/geometry/w3.stl
The new fvModels is a general interface to optional physical models in the
finite volume framework, providing sources to the governing conservation
equations, thus ensuring consistency and conservation. This structure is used
not only for simple sources and forces but also provides a general run-time
selection interface for more complex models such as radiation and film, in the
future this will be extended to Lagrangian, reaction, combustion etc. For such
complex models the 'correct()' function is provided to update the state of these
models at the beginning of the PIMPLE loop.
fvModels are specified in the optional constant/fvModels dictionary and
backward-compatibility with fvOption is provided by reading the
constant/fvOptions or system/fvOptions dictionary if present.
The new fvConstraints is a general interface to optional numerical constraints
applied to the matrices of the governing equations after construction and/or to
the resulting field after solution. This system allows arbitrary changes to
either the matrix or solution to ensure numerical or other constraints and hence
violates consistency with the governing equations and conservation but it often
useful to ensure numerical stability, particularly during the initial start-up
period of a run. Complex manipulations can be achieved with fvConstraints, for
example 'meanVelocityForce' used to maintain a specified mean velocity in a
cyclic channel by manipulating the momentum matrix and the velocity solution.
fvConstraints are specified in the optional system/fvConstraints dictionary and
backward-compatibility with fvOption is provided by reading the
constant/fvOptions or system/fvOptions dictionary if present.
The separation of fvOptions into fvModels and fvConstraints provides a rational
and consistent separation between physical and numerical models which is easier
to understand and reason about, avoids the confusing issue of location of the
controlling dictionary file, improves maintainability and easier to extend to
handle current and future requirements for optional complex physical models and
numerical constraints.
This function gives a value of one during a user-specified duration, and
zero at all other times. It is useful for defining the time range in
which an injection or ignition heat source or similar operates.
Example usage, scaling a value:
<name>
{
type scale;
scale squarePulse;
start 0;
duration 1;
value 100;
}
This function has been utilised in a number of tutorial fvOption
configurations to provide a specific window in which the fvOption is
applied. This was previously achieved by "timeStart" and "duration"
controls hard coded into the fvOptions themselves.
A number of fvOptions that apply to a user-derined field can now
automatically work what primitive type they apply to. These options can
apply to any field type, and in some cases even multiple fields of
differing type. Example usage of the options to which this change
applies are shown below:
codedSource1
{
type codedSource;
name codedSource1;
field h;
...
}
fixedValueConstraint1
{
type fixedValueConstraint;
fieldValues
{
R (1 0 0 1 0 1);
epsilon 150;
}
...
}
phaseLimitStabilization11
{
type phaseLimitStabilization;
field sigma.liquid;
...
}
Previously to apply to a given type, these options had to be selected
with the name of the type prepended to the option name (e.g., "type
symmTensorPhaseLimitStabilization;") and those that operated on multiple
fields were restricted to those fields being of the same type.
A number of other options have had improvements made to their handling
of user specification of fields. Where possible, the option will now
attempt to work out what field the option applies to automatically. The
following options, therefore, no longer require "field" or "fields"
entries:
actuationDiskSource
buoyancyEnergy
buoyancyForce
meanVelocityForce
rotorDiskSource
volumeFractionSource
constantHeatTransfer
function2HeatTransfer
variableHeatTransfer
Non-standard field names can be overridden in the same way as in
boundary conditions; e.g., the velocity name can be overridden with a "U
<UName>;" entry if it does not have the default name, "U". The name of
the energy field is now always determined from the thermodynamics
model and should always be correct. Some options that can be applied to
an individual phase also support a "phase <phaseName>;" entry;
fvOptions field-name handling has been rewritten to increase its
flexibility and to improve warning messages. The flexibility now allows
for options that apply to all fields, or all fields of a given phase,
rather than being limited to a specific list of field names. Messages
warning about options that have not been applied now always print just
once per time-step.
Vertices are generated using run time compilation functionality.
File duplication avoided by placement in:
tutorials/resources/blockMesh/sloshingTank2D
tutorials/resources/blockMesh/sloshingTank3D
Originally the only supported geometry specification were triangulated surfaces,
hence the name of the directory: constant/triSurface, however now that other
surface specifications are supported and provided it is much more logical that
the directory is named accordingly: constant/geometry. All tutorial and
template cases have been updated.
Note that backward compatibility is provided such that if the constant/geometry
directory does not exist but constant/triSurface does then the geometry files
are read from there.
The phase-change functionality in interPhaseChangeFoam has been generalised and
moved into the run-time selectable twoPhaseChange library included into
interFoam providing optional phase-change. The three cavitation models provided
in interPhaseChangeFoam are now included in the twoPhaseChange library and the
two interPhaseChangeFoam cavitation tutorials updated for interFoam.
interPhaseChangeFoam has been replaced by a user redirection script which prints
the following message:
The interPhaseChangeFoam solver has solver has been replaced by the more general
interFoam solver, which now supports phase-change using the new twoPhaseChange
models library.
To run with with phase-change create a constant/phaseChangeProperties dictionary
containing the phase-change model specification, e.g.
phaseChangeModel SchnerrSauer;
pSat 2300; // Saturation pressure
See the following cases for an example converted from interPhaseChangeFoam:
$FOAM_TUTORIALS/multiphase/interFoam/laminar/cavitatingBullet
$FOAM_TUTORIALS/multiphase/interFoam/RAS/propeller
It is better to not select and instantiate a model, fvOption etc. than to create
it and set it inactive as the creation process requires reading of settings,
parameters, fields etc. with all the associated specification and storage
without being used. Also the incomplete implementation added a lot of
complexity in the low-level operation of models introducing a significant
maintenance overhead and development overhead for new models.
