Commit Graph

50 Commits

Author SHA1 Message Date
261ce05fac sampledSurfaces: Write multiple fields to the same file
This prevents excessive duplication of surface geometry and makes
post-processing tasks in paraview more convenient.

The Nastran and Star-CD surface formats were found not to work, so
support for these output types has been removed. Raw, VTK, Foam and
Ensight formats are all still available.
2021-11-23 14:44:34 +00:00
c01118589f functionObjects: Added fields() function to provide list of required fields to postProcess
With this change each functionObject provides the list of fields required so
that the postProcess utility can pre-load them before executing the list of
functionObjects.  This provides a more convenient interface than using the
-field or -fields command-line options to postProcess which are now redundant.
2021-10-21 09:23:34 +01:00
056cc20f34 functionObjects: surfaceFieldValue, volFieldValue: Various improvements
A number of changes have been made to the surfaceFieldValue and
volFieldValue function objects to improve their usability and
performance, and to extend them so that similar duplicate functionality
elsewhere in OpenFOAM can be removed.

Weighted operations have been removed. Weighting for averages and sums
is now triggered simply by the existence of the "weightField" or
"weightFields" entry. Multiple weight fields are now supported in both
functions.

The distinction between oriented and non-oriented fields has been
removed from surfaceFieldValue. There is now just a single list of
fields which are operated on. Instead of oriented fields, an
"orientedSum" operation has been added, which should be used for
flowRate calculations and other similar operations on fluxes.

Operations minMag and maxMag have been added to both functions, to
calculate the minimum and maximum field magnitudes respectively. The min
and max operations are performed component-wise, as was the case
previously.

In volFieldValue, minMag and maxMag (and min and mag operations when
applied to scalar fields) will report the location, cell and processor
of the maximum or minimum value. There is also a "writeLocation" option
which if set will write this location information into the output file.
The fieldMinMax function has been made obsolete by this change, and has
therefore been removed.

surfaceFieldValue now operates in parallel without accumulating the
entire surface on the master processor for calculation of the operation.
Collecting the entire surface on the master processor is now only done
if the surface itself is to be written out.
2021-07-13 16:51:33 +01:00
c8307122c6 surfaceFieldValue: Corrected input of the orientWeightField
Resolves bug-report https://bugs.openfoam.org/view.php?id=3689
2021-06-19 12:12:06 +01:00
ee777e4083 Standardise on British spelling: -ize -> -ise
OpenFOAM is predominantly written in Britain with British spelling conventions
so -ise is preferred to -ize.
2021-06-01 19:11:58 +01:00
3ca14ebe58 functionObjects: Fixes to restart and run-time modification behaviour
All function objects now re-read as a result of run-time modifications
to the system/controlDict.

Function objects that write log files (via the logFiles class) will now
generate a new postProcessing/<funcName>/<time> directory as a result of
either restart or run-time modification. Log files will therefore never
be overwritten by restart or run-time modification, except for when a
case is restarted at the same time as a previous execution (e.g.,
repeated runs at the start time).
2021-01-26 08:12:21 +00:00
34cbcd444d surfaceFieldValue: Ouput as correct primitive type
If the surfaceFieldValue function object is used to compute an
area-normal average or integral of a vector quantity, the result will
now be correctly written out as a scalar.

Previously surfaceFieldValue was limited to writing the same type as the
input field. A vector area-normal average or integral therefore had to
be written out as a vector. This was done by setting the x component to
the result, and the y and z components to zero. This was considered to
be counter-intuitive.
2021-01-08 14:39:55 +00:00
bda07488f0 volumetricFlowRateTriSurface: Corrected pre-configuration, and added an example
A volumetric flow rate through a tri-surface can now be obtained using
the volumetricFlowRateTriSurface preconfigured function object, using
the following entry in system/controlDict:

    fuctions
    {
        #includeFunc "volumetricFlowRateTriSurface(name=surface.stl)"
    }

Where "surface.stl" is a tri-surface file in the constant/triSurface
directory. An example of this has been added to the
incompressible/pimpleFoam/RAS/impeller tutorial case.

Note that when possible, it is preferable to use the flowRatePatch or
flowRateFaceZone functions, as these make direct use of the flux and
therefore report a value that is exactly that computed by the solver.
volumetricFlowRateTriSurface, by contrast, does interpolation of the
velocity field which introduces error.

In addition, a minor fix has been made to the underlying
surfaceFieldValue function object so that it does not need a zone/set
name when values on a searchable surface are requested.
2021-01-08 12:03:25 +00:00
f7848e62a1 functionObjects: Emit warning messages only for field names which do not exist for any type
Resolves bug-report https://bugs.openfoam.org/view.php?id=3583
2020-10-27 20:03:19 +00:00
77ee78b47e functionObjects::volFieldValue: corrected parallel operation of writeFields = true
Resolves bug-report https://bugs.openfoam.org/view.php?id=3552
2020-09-21 10:55:49 +01:00
def4772281 Documentation: Centred the Class Declaration comment
Patch contributed by Institute of Fluid Dynamics,
Helmholtz-Zentrum Dresden - Rossendorf (HZDR)
2020-08-28 13:28:58 +01:00
e01de98df0 functionObjects::volFieldValue: Added support for a list of weighting fields
This is particularly useful for multiphase simulations for which integrating the
density weighted phase properties also requires the phase fraction to be
including in the weighting.

A single weight field can be specified as before:

    weightField rho;

or a list specified by:

    weightFields (alpha.water rho.water);
2020-02-24 15:28:36 +00:00
b55bc28698 sampledSurface::writers: Added writeFormat option to select ascii or binary
e.g. in tutorials/incompressible/pisoFoam/LES/motorBike/motorBike/system/cuttingPlane

    surfaceFormat   vtk;
    writeFormat     binary;
    fields          (p U);

selects writing the VTK surface files in binary format which significantly
speeds-up reading of the files in paraview.

Currently binary writing is supported in VTK and EnSight formats.
2020-01-29 14:59:31 +00:00
3631f13a98 sampledSurface/writers: Removed unnecessary "verbose" argument 2020-01-28 22:46:00 +00:00
93047de818 functionObject::surfaceFieldValue: Removed temporary diagnostics statement 2019-11-11 13:19:02 +00:00
a5c33c5e18 functionObject::surfaceFieldValue: Added support for weighting with negative fields
For example this allows the an inlet flux to be used to create a weighted
average.

Resolves bug-report https://bugs.openfoam.org/view.php?id=3384
2019-11-11 12:20:35 +00:00
8ea55e8f06 functionObjects/.../*FieldValue: Protect against division by zero
Patch contributed by Timo Niemi, VTT.
Resolves bug report https://bugs.openfoam.org/view.php?id=3370
2019-10-14 09:21:27 +01:00
8e9f692aa4 Standardised the class declaration section comments to correspond to the foamNewSource template 2019-06-13 21:26:33 +01:00
30bea84fac C++11 conformance and consistency: Added "move" constructors and assignment operators to OpenFOAM containers
Replaced all uses of complex Xfer class with C++11 "move" constructors and
assignment operators.  Removed the now redundant Xfer class.

This substantial changes improves consistency between OpenFOAM and the C++11 STL
containers and algorithms, reduces memory allocation and copy overhead when
returning containers from functions and simplifies maintenance of the core
libraries significantly.
2019-05-25 17:40:39 +01:00
2f3d47ad7e Residuals: New MeshObject class to store solver performance residuals
This is more efficient and modular than the previous approach of storing the
residuals in the mesh data dictionary.
2019-04-04 19:08:08 +01:00
61c9bc2ee3 functionObjects: Rationalised use of enumerations by using the C++11 scoped form 2018-08-23 17:25:47 +01:00
bf54ab67e1 Updated OpenFOAM Foundation web-link in headers 2018-07-06 21:42:54 +01:00
f29114bfb6 Removed incomplete, inconsistent, confusing and un-maintained header clutter 2018-06-20 15:55:18 +01:00
c3be52bcd6 Corrected 'Class' entries in headers
Using script provided by Bruno Santos
See https://bugs.openfoam.org/view.php?id=2919
2018-05-07 14:18:44 +01:00
fc2b2d0c05 OpenFOAM: Rationalized the naming of scalar limits
In early versions of OpenFOAM the scalar limits were simple macro replacements and the
names were capitalized to indicate this.  The scalar limits are now static
constants which is a huge improvement on the use of macros and for consistency
the names have been changed to camel-case to indicate this and improve
readability of the code:

    GREAT -> great
    ROOTGREAT -> rootGreat
    VGREAT -> vGreat
    ROOTVGREAT -> rootVGreat
    SMALL -> small
    ROOTSMALL -> rootSmall
    VSMALL -> vSmall
    ROOTVSMALL -> rootVSmall

The original capitalized are still currently supported but their use is
deprecated.
2018-01-25 09:46:37 +00:00
7bdbab7f4e Rationalize the "pos" function
"pos" now returns 1 if the argument is greater than 0, otherwise it returns 0.
This is consistent with the common mathematical definition of the "pos" function:

https://en.wikipedia.org/wiki/Sign_(mathematics)

However the previous implementation in which 1 was also returned for a 0
argument is useful in many situations so the "pos0" has been added which returns
1 if the argument is greater or equal to 0.  Additionally the "neg0" has been
added which returns 1 if if the argument is less than or equal to 0.
2017-06-22 14:32:18 +01:00
f5b91be3d9 functionObjects:surfaceFieldValue, volFieldValue: Added weightedSum and weighted[Area|Vol]Integrate
Patch contributed by Timo Niemi, VTT.
Resolves patch request https://bugs.openfoam.org/view.php?id=2452
2017-02-06 15:48:11 +00:00
842aa71ed7 functionObjects::volRegion: Improved parallel efficiency
Based on patch contributed by Kevin Nordin-Bates
Resolves bug-report https://bugs.openfoam.org/view.php?id=2401
2016-12-19 19:20:09 +00:00
8bfff27468 Updated member type comments
See http://bugs.openfoam.org/view.php?id=2356
2016-11-28 09:22:56 +00:00
fba6ebbac4 functionObjects::fieldValueDelta: Corrected documentation 2016-11-18 14:30:42 +00:00
b37269d481 functionObjects: Improved handling of multi-file indexing and code style
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2216
2016-08-24 19:34:00 +01:00
d27e752ad6 functionObjects::volFieldValue: Updated to use the new volRegion functionObject 2016-08-11 16:25:27 +01:00
6a529f2f76 functionObjects::volRegion: General base-class to handle vol (cell) region processing
Renamed the original volRegion -> volFieldValue to clarify the purpose
of this class to process vol fields on a volRegion.
2016-08-11 15:11:19 +01:00
4765702445 functionObjects: Further simplification and rationalization using the fvMeshFunctionObject base-class 2016-08-10 12:29:19 +01:00
4a301e94c6 functionObjects: Separated writeFile and logFiles (previously writeFiles) from regionFunctionObject
Now the functionality to write single graph files or log files (vs time)
may be used in the creation of any form of functionObject, not just
those relating to a mesh region.
2016-08-07 15:23:55 +01:00
7656c076c8 C++11: Replaced the C NULL with the safer C++11 nullptr
Requires gcc version 4.7 or higher
2016-08-05 17:19:38 +01:00
c1db326f71 functionObjects: Update documentation 2016-07-09 22:08:11 +01:00
2e419c58f8 functionObjects::surfaceRegion: Write the surface geometry for formats in which the data is in separate files 2016-06-30 10:33:55 +01:00
c263bbca65 Completed transformation of post-processing utilities into functionObjects 2016-06-28 19:26:23 +01:00
8a5304edf6 Doxygen documentation: Standardized the 'See also' heading 2016-06-17 17:31:34 +01:00
2ca0a6f362 Doxygen documentation: Use the standard 'Usage' rather than the '\heading....' 2016-06-17 17:22:24 +01:00
4ebaed67f9 Doxygen documentation: Remove superfluous linebreak 2016-06-17 17:13:39 +01:00
1e2bba0572 functionObjects::surfaceRegion,volRegion: Improved documentation 2016-06-15 09:05:35 +01:00
8e99a312e8 functionObjects: Completed transformation of 'source' to vol/surfaceRegion 2016-06-13 09:42:14 +01:00
b3f4d5855d functionObjects: Simplified the handling of the post-processing mode
Replaced the 'postProcess' argument to the 'write' and 'execute'
functions with the single static member 'postProcess' in the
functionObject base-class.
2016-06-13 08:36:03 +01:00
1d7e1a7ad5 functionObjects: renamed faceSource -> surfaceRegion, cellSource -> volRegion
The use of the term 'source' in the context of post-processing is
confusing and does not properly describe the process of region
selection.  The new names 'surfaceRegion' and 'volRegion' better
describe the purpose of the functionObjects which is to provide field
processing functionality limited to a specified region of space, either
a surface or volume.

The keyword 'source' is renamed 'regionType' which better describes the
purpose which is to specify the method by which the surface or volume
region is selected.

The keyword to select the name of the surface or volume region is
renamed from 'sourceName' to 'name' consistent with the other
name-changes above.
2016-06-12 20:56:51 +01:00
e1079504cd functionObjects: 'valueOutput' -> 'writeFields' 2016-06-11 15:25:00 +01:00
f30e7a6721 functionObjects::fieldValue: Added support for 'field' entry
Added patchIntegrate configuration
2016-06-10 10:37:37 +01:00
4c07e6226d functionObjects: 'output:' -> 'write:' for consistency with the naming of the 'write' function 2016-06-09 16:06:44 +01:00
8b672f0f1a postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00