Commit Graph

106 Commits

Author SHA1 Message Date
d41166187a writeEntry: Rationalised for consistency, ease of use and maintainability
The writeEntry form is now defined and used consistently throughout OpenFOAM
making it easier to use and extend, particularly to support binary IO of complex
dictionary entries.
2019-03-14 20:54:10 +00:00
7b1840c7d3 functionObjects: Added phaseScalarTransport function
This is like the scalarTrasport function except that the transported
scalar is confined to a single phase of a multiphase simulation. In
addition to the usual specification for the scalarTransport function
(i.e., a field, schemes and solution parameters), the user needs to
specify the phase-flux or a pressure field which can be used to generate
it.

Example usage for interFoam:

    phaseScalarTransport1
    {
        type            phaseScalarTransport;
        libs            ("libsolverFunctionObjects.so");

        field           s.water;
        p               p_rgh;
    }

Example usage for reactingTwoPhaseEulerFoam:

    phaseScalarTransport1
    {
        type            phaseScalarTransport;
        libs            ("libsolverFunctionObjects.so");

        field           s.water;
        alphaPhi        alphaRhoPhi.water;
        rho             thermo:rho.water;
    }

The function will write out both the per-unit-phase field that is solved
for (s.water in the above examples) and also the mixture-total field
(alphaS.water), which is often more convenient for post-processing.
2019-02-15 10:56:33 +00:00
9847205bfc functionObjects: Qdot: Added configuration 2019-01-24 11:27:47 +00:00
8baec3bc5d sampledSurface: Created a sampledSurfaces namespace for the sampledSurface classes
to rationalise the structure and class names to avoid the need for the confusing
addNamedToRunTimeSelectionTable and use instead use the standard
addToRunTimeSelectionTable to populate the run-time selection table.
2019-01-21 19:58:18 +00:00
5925868fb7 waves: Moved mean velocity specification back into the wave models
With the inclusion of boundary layer modelling in the gas, the
separation of wave perturbation from and mean flow became less useful,
and potentially prevents further extension to support similar boundary
layer modelling in the liquid.

The mean velocity entry, UMean, is now needed in the
constant/waveProperties file rather than in the waveVelocity boundary
condition.
2018-12-18 10:34:40 +00:00
967edc9425 waves: Split mean flow from wave perturbation modelling
In order to increase the flexibility of the wave library, the mean flow
handling has been removed from the waveSuperposition class. This makes
waveSuperposition work purely in terms of perturbations to a mean
background flow.

The input has also been split, with waves now defined as region-wide
settings in constant/waveProperties. The mean flow parameters are sill
defined by the boundary conditions.

The new format of the velocity boundary is much simpler. Only a mean
flow velocity is required.

    In 0/U:

        boundaryField
        {
            inlet
            {
                type            waveVelocity;
                UMean           (2 0 0);
            }
            // etc ...
        }

Other wave boundary conditions have not changed.

The constant/waveProperties file contains the wave model selections and
the settings to define the associated coordinate system and scaling
functions:

    In constant/waveProperties:

        origin          (0 0 0);
        direction       (1 0 0);
        waves
        (
            Airy
            {
                length      300;
                amplitude   2.5;
                phase       0;
                angle       0;
            }
        );
        scale           table ((1200 1) (1800 0));
        crossScale      constant 1;

setWaves has been changed to use a system/setWavesDict file rather than
relying on command-line arguments. It also now requires a mean velocity
to be specified in order to prevent ambiguities associated with multiple
inlet patches. An example is shown below:

    In system/setWavesDict:

        alpha   alpha.water;
        U       U;
        liquid  true;
        UMean   (1 0 0);
2018-12-10 13:39:06 +00:00
bd2f275e09 streamlines: updated packaged function objects for new seeding methods 2018-12-10 13:05:54 +00:00
e353a07ecf functionObjects/field/age: Added schemesField option
This allows scheme and solver settings used for the calculation of age
to be copied from another variable
2018-11-25 12:55:09 +00:00
ecd30940d1 caseDicts: added example All* workflow scripts 2018-11-23 18:50:36 +00:00
b928e37677 functionObjects: Added age function object
This object calculates a field of the age of fluid in the domain; i.e.,
the time taken for a fluid particle to travel to a location from an
inlet. It outputs a field, named age, with dimensions of time, and
requires a solver and a div(phi,age) scheme to be specified. A number of
corrections for the solution procedure can be set, as well as the name
of the flux and density fields.

Example specification:

    age1
    {
        type    age;
        libs    ("libfieldFunctionObjects.so");
        nCorr   10;
        phi     phi;
        rho     rho;
    }

Example usage:

    postProcess -func age -fields "(phi)" -latestTime

This work was supported by Robert Secor and Lori Holmes, at 3M
2018-11-23 08:37:48 +00:00
5c86bafb82 etc/caseDicts/solvers/chemistry/TDAC: New configuration files for TDAC
to simplify reacting case setup.

Tutorials
    tutorials/combustion/chemFoam/ic8h18_TDAC
    tutorials/combustion/reactingFoam/RAS/SandiaD_LTS
    tutorials/combustion/reactingFoam/laminar/counterFlowFlame2DLTS_GRI_TDAC
    tutorials/combustion/reactingFoam/laminar/counterFlowFlame2D_GRI_TDAC
updated to benefit from the new configuration files.

Patch contributed by Francesco Contino
2018-11-08 23:06:52 +00:00
9ff8bf3ae4 etc/caseDicts: Remove inappropriate FoamFile entries from configuration files 2018-11-08 23:06:08 +00:00
e757d5210e functionObjects::log: New functionObject to calculate the natural logarithm of a scalar field
Description
    Calculates the natural logarithm of the specified scalar field.

    Performs \f$ln(max(x, a))\f$ where \f$x\f$ is the field and \f$a\f$ an
    optional clip to handle 0 or negative \f$x\f$.

The etc/caseDicts/postProcessing/fields/log configuration file is provided so
that the simple #includeFunc can be used to execute this functionObject during
the run, e.g. for some dimensionless field x

functions
{
    #includeFunc log(x)
}

or if x might be 0 or negative in some regions the optional clip may be applied:

functions
{
    #includeFunc log(p,clip=1e-6)
}
2018-09-05 23:43:54 +01:00
2a3f5e7b79 etc/caseDicts/postProcessing/visualization/surfaces: Corrected typo in comment
Resolves bug-report https://bugs.openfoam.org/view.php?id=3013
2018-07-31 14:16:18 +01:00
fdbf3c134f Rationalized dictionary and configuration file headers 2018-07-09 15:40:05 +01:00
e8bb954fb0 Corrected functionObject configuration file headers 2018-07-09 12:28:56 +01:00
bf54ab67e1 Updated OpenFOAM Foundation web-link in headers 2018-07-06 21:42:54 +01:00
33ec42e516 singleGraph function: extended example settings 2018-06-22 16:57:08 +01:00
fa12e660db etc/caseDicts/postProcessing/probes: Renaming
Renamed boundaryPoints and internalPoints to boundaryProbes and
internalProbes to be more specific about the intended function.
2018-06-21 11:02:50 +01:00
3ef4c803cd sampledSet: Consistent renaming, documentation, and code maintenance
The sampled sets have been renamed in a more explicit and consistent
manner, and two new ones have also been added. The available sets are as
follows:

    arcUniform: Uniform samples along an arc. Replaces "circle", and
    adds the ability to sample along only a part of the circle's
    circumference. Example:

        {
            type        arcUniform;
            centre      (0.95 0 0.25);
            normal      (1 0 0);
            radial      (0 0 0.25);
            startAngle  -1.57079633;
            endAngle    0.52359878;
            nPoints     200;
            axis        x;
        }

    boundaryPoints: Specified point samples associated with a subset of
    the boundary. Replaces "patchCloud". Example:

        {
            type        boundaryPoints;
            patches     (inlet1 inlet2);
            points      ((0 -0.05 0.05) (0 -0.05 0.1) (0 -0.05 0.15));
            maxDistance 0.01;
            axis        x;
        }

    boundaryRandom: Random samples within a subset of the boundary.
    Replaces "patchSeed", but changes the behaviour to be entirely
    random. It does not seed the boundary face centres first. Example:

        {
            type        boundaryRandom;
            patches     (inlet1 inlet2);
            nPoints     1000;
            axis        x;
        }

    boxUniform: Uniform grid of samples within a axis-aligned box.
    Replaces "array". Example:

        {
            type    boxUniform;
            box     (0.95 0 0.25) (1.2 0.25 0.5);
            nPoints (2 4 6);
            axis    x;
        }

    circleRandom: Random samples within a circle. New. Example:

        {
            type        circleRandom;
            centre      (0.95 0 0.25);
            normal      (1 0 0);
            radius      0.25;
            nPoints     200;
            axis        x;
        }

    lineFace: Face-intersections along a line. Replaces "face". Example:

        {
            type        lineFace;
            start       (0.6 0.6 0.5);
            end         (0.6 -0.3 -0.1);
            axis        x;
        }

    lineCell: Cell-samples along a line at the mid-points in-between
    face-intersections. Replaces "midPoint". Example:

        {
            type        lineCell;
            start       (0.5 0.6 0.5);
            end         (0.5 -0.3 -0.1);
            axis        x;
        }

    lineCellFace: Combination of "lineFace" and "lineCell". Replaces
    "midPointAndFace". Example:

        {
            type        lineCellFace;
            start       (0.55 0.6 0.5);
            end         (0.55 -0.3 -0.1);
            axis        x;
        }

    lineUniform: Uniform samples along a line. Replaces "uniform".
    Example:

        {
            type        lineUniform;
            start       (0.65 0.3 0.3);
            end         (0.65 -0.3 -0.1);
            nPoints     200;
            axis        x;
        }

    points: Specified points. Replaces "cloud" when the ordered flag is
    false, and "polyLine" when the ordered flag is true. Example:

        {
            type        points;
            points      ((0 -0.05 0.05) (0 -0.05 0.1) (0 -0.05 0.15));
            ordered     yes;
            axis        x;
        }

    sphereRandom: Random samples within a sphere. New. Example:

        {
            type        sphereRandom;
            centre      (0.95 0 0.25);
            radius      0.25;
            nPoints     200;
            axis        x;
        }

    triSurfaceMesh: Samples from all the points of a triSurfaceMesh.
    Replaces "triSurfaceMeshPointSet". Example:

        {
            type        triSurfaceMesh;
            surface     "surface.stl";
            axis        x;
        }

The headers have also had documentation added. Example usage and a
description of the control parameters now exists for all sets.

In addition, a number of the algorithms which generate the sets have
been refactored or rewritten. This was done either to take advantage of
the recent changes to random number generation, or to remove ad-hoc
fixes that were made unnecessary by the barycentric tracking algorithm.
2018-06-21 08:41:44 +01:00
786318cabd utilities: Centralized annotated utility dictionaries to etc/caseDicts/annotated 2018-06-11 17:20:08 +01:00
3510204297 etc/caseDicts: added useful examples of common dictionary files
including decomposeParDict, mapFieldsDict, setFieldsDict, surfaceFeaturesDict,
createBafflesDict, createPatchDict, snappyHexMeshDict, extrudeMeshDict and
collapseDict
2018-06-11 12:27:40 +01:00
247378332d Relocated etc/caseDicts/foamyHexMeshDict -> etc/caseDicts/mesh/generation/foamyHexMeshDict 2018-06-10 22:44:58 +01:00
b012e13a49 foamToVTK::writeVTK: Added a standard functionObject configuration file 2018-06-10 17:37:43 +01:00
63d066f6dc meshQualityDict.cfg: disabled minTetQuality since tracking works without it 2018-06-09 14:41:08 +01:00
76cb711875 Revert "meshQualityDict.cfg: disabled minTetQuality since tracking works without it"
This reverts commit 04954fbd19.
2018-06-09 14:32:36 +01:00
04954fbd19 meshQualityDict.cfg: disabled minTetQuality since tracking works without it 2018-06-09 14:28:12 +01:00
7c3732aa5a meshQualityDict: 'master' dictionary relocated to 'etc/caseDicts/mesh/generation' 2018-06-09 14:18:16 +01:00
7f49d6e2cc scale: function object to multiply a field by a scale factor 2018-06-06 09:41:04 +01:00
aea8dc0516 tutorials: Updated to use surfaceFeatures rather than the deprecated surfaceFeatureExtract 2018-05-29 19:18:53 +01:00
c7d711bebf patchAverage: use areaAverage for physically meaningful results
Resolves issue https://bugs.openfoam.org/view.php?id=2936
2018-05-15 16:39:45 +01:00
785a7d9e3f cyclicRepeatAMI: New constraint patch type
A new constraint patch has been added which permits AMI coupling in
cyclic geometries. The coupling is repeated with different multiples of
the cyclic transformation in order to achieve a full correspondence.
This allows, for example, a cylindrical AMI interface to be used in a
sector of a rotational geometry.

The patch is used in a similar manner to cyclicAMI, except that it has
an additional entry, "transformPatch". This entry must name a coupled
patch. The transformation used to repeat the AMI coupling is taken from
this patch. For example, in system/blockMeshDict:

boundary
(
    cyclic1
    {
        type cyclic;
        neighbourPatch cyclic2;
        faces ( ... );
    }

    cyclic2
    {
        type cyclic;
        neighbourPatch cyclic1;
        faces ( ... );
    }

    cyclicRepeatAMI1
    {
        type cyclicRepeatAMI;
        neighbourPatch cyclicRepeatAM2;
        transformPatch cyclic1;
        faces ( ... );
    }

    cyclicRepeatAMI2
    {
        type cyclicRepeatAMI;
        neighbourPatch cyclicRepeatAMI1;
        transformPatch cyclic1;
        faces ( ... );
    }

    // other patches ...
);

In this example, the transformation between cyclic1 and cyclic2 is used
to define the repetition used by the two cyclicRepeatAMI patches.
Whether cyclic1 or cyclic2 is listed as the transform patch is not
important.

A tutorial, incompressible/pimpleFoam/RAS/impeller, has been added to
demonstrate the functionality. This contains two repeating AMI pairs;
one cylindrical and one planar.

A significant amount of maintenance has been carried out on the AMI and
ACMI patches as part of this work. The AMI methods now return
dimensionless weights by default, which prevents ambiguity over the
units of the weight field during construction. Large amounts of
duplicate code have also been removed by deriving ACMI classes from
their AMI equivalents. The reporting and writing of AMI weights has also
been unified.

This work was supported by Dr Victoria Suponitsky, at General Fusion
2018-04-30 09:23:52 +01:00
8dcfc9e9f8 streamLine: Added option to track in both directions
Streamlines can now be tracked in both directions from the set of
initial locations. The keyword controlling this behaviour is
"direction", which can be set to "forward", "backward" or "both".

This new keyword superseeds the "trackForward" entry, which has been
retained for backwards compatibility.
2018-04-09 08:36:16 +01:00
1073607cb0 Corrected spelling and typo's in comments
Resolves bug report https://bugs.openfoam.org/view.php?id=2845
2018-03-05 20:14:28 +00:00
e08128781e functionObjects::turbulenceIntensity: New functionObject which writes the turbulenceIntensity field
Description
    Evaluates and writes the turbulence intensity field 'I'.

    The turbulence intensity field 'I' is the root-mean-square of the turbulent
    velocity fluctuations normalised by the local velocity magnitude:
    \f[
        I \equiv \frac{\sqrt{\frac{2}{3}\, k}}{U}
    \f]
    To avoid spurious extrema and division by 0 I is limited to 1 where the
    velocity magnitude is less than the turbulent velocity fluctuations.

    Example of function object specification:
    \verbatim
    functions
    {
        .
        .
        .
        turbulenceIntensity
        {
            type        turbulenceIntensity;
            libs        ("libfieldFunctionObjects.so");
        }
        .
        .
        .
    }
    \endverbatim

    or using the standard configuration file:
    \verbatim
    functions
    {
        .
        .
        .
        #includeFunc turbulenceIntensity
        .
        .
        .
    }
    \endverbatim
2018-03-02 14:32:29 +00:00
d008fe4468 timeFunctionObject: New functionObject which writes run, CPU and clock time
and optionally the CPU and clock times per time step.

Example of function object specification:
time
{
    type            time;

    libs            ("libutilityFunctionObjects.so");

    writeControl    timeStep;
    writeInterval   1;

    perTimeStep     no;
}

Adding

    #includeFunc time

to the functions list in the controlDict of the motorBike tutorial generates

0               1.190000e+00    1
1               1.640000e+00    1
2               1.940000e+00    2

Enabling the optional writing of the CPU and clock time per time step is
straight forward:

    #includeFunc time(perTimeStep=yes)
2018-01-23 10:10:10 +00:00
a2ac77bdb1 wallHeatTransferCoeff functionObject: Added configuration file 2017-12-13 10:23:13 +00:00
e1645856f8 foamyHexMesh: Switched off output of all the secondary meshes 2017-11-13 08:31:59 +00:00
c2835a450b functionObjects::ddt: New functionObject which calculates and writes the Eulerian time derivative of a field
Based on patch contributed by Tobias Holzmann
Resolves feature-request https://bugs.openfoam.org/view.php?id=2525
2017-11-05 10:58:07 +00:00
cf074d3689 foamyHexMesh: Set no refinement iterations in global dictionary 2017-10-06 11:46:33 +01:00
db6495986b Added icoUncoupledKinematicCloud packaged function object 2017-09-07 17:42:29 +01:00
c3fd351234 flowRateFaceZone packaged function object: corrected Description 2017-07-13 10:49:41 -05:00
9baf360c4d Revert "interfaceHeight function object: added preconfigured file in etc"
This reverts commit 5436668030.
2017-07-13 10:44:20 -05:00
5436668030 interfaceHeight function object: added preconfigured file in etc 2017-07-13 10:40:23 -05:00
1b377dd439 interfaceHeight: Improved the description 2017-06-30 12:08:00 +01:00
d13285cf90 postProcessing: packaged interfaceHeight function object 2017-06-29 23:14:46 +01:00
11c0e19b0b postProcessing: reverted isosurface function to use isoSurface algorithm 2017-05-19 15:20:08 +01:00
742446dffd flowRateFaceZone: faceZone configuration for the surfaceFieldValue functionObject 2017-05-05 18:29:14 +01:00
371762757d Lagrangian: Rewrite of the particle tracking algorithm to function in
terms of the local barycentric coordinates of the current tetrahedron,
rather than the global coordinate system.

Barycentric tracking works on any mesh, irrespective of mesh quality.
Particles do not get "lost", and tracking does not require ad-hoc
"corrections" or "rescues" to function robustly, because the calculation
of particle-face intersections is unambiguous and reproducible, even at
small angles of incidence.

Each particle position is defined by topology (i.e. the decomposed tet
cell it is in) and geometry (i.e. where it is in the cell). No search
operations are needed on restart or reconstruct, unlike when particle
positions are stored in the global coordinate system.

The particle positions file now contains particles' local coordinates
and topology, rather than the global coordinates and cell. This change
to the output format is not backwards compatible. Existing cases with
Lagrangian data will not restart, but they will still run from time
zero without any modification. This change was necessary in order to
guarantee that the loaded particle is valid, and therefore
fundamentally prevent "loss" and "search-failure" type bugs (e.g.,
2517, 2442, 2286, 1836, 1461, 1341, 1097).

The tracking functions have also been converted to function in terms
of displacement, rather than end position. This helps remove floating
point error issues, particularly towards the end of a tracking step.

Wall bounded streamlines have been removed. The implementation proved
incompatible with the new tracking algorithm. ParaView has a surface
LIC plugin which provides equivalent, or better, functionality.

Additionally, bug report <https://bugs.openfoam.org/view.php?id=2517>
is resolved by this change.
2017-04-28 09:25:10 +01:00
9801c25788 The "<type>Coeffs" sub-dictionary is now optional for most model parameters
except turbulence and lagrangian which will also be updated shortly.

For example in the nonNewtonianIcoFoam offsetCylinder tutorial the viscosity
model coefficients may be specified in the corresponding "<type>Coeffs"
sub-dictionary:

transportModel  CrossPowerLaw;

CrossPowerLawCoeffs
{
    nu0         [0 2 -1 0 0 0 0]  0.01;
    nuInf       [0 2 -1 0 0 0 0]  10;
    m           [0 0 1 0 0 0 0]   0.4;
    n           [0 0 0 0 0 0 0]   3;
}

BirdCarreauCoeffs
{
    nu0         [0 2 -1 0 0 0 0]  1e-06;
    nuInf       [0 2 -1 0 0 0 0]  1e-06;
    k           [0 0 1 0 0 0 0]   0;
    n           [0 0 0 0 0 0 0]   1;
}

which allows a quick change between models, or using the simpler

transportModel  CrossPowerLaw;

nu0         [0 2 -1 0 0 0 0]  0.01;
nuInf       [0 2 -1 0 0 0 0]  10;
m           [0 0 1 0 0 0 0]   0.4;
n           [0 0 0 0 0 0 0]   3;

if quick switching between models is not required.

To support this more convenient parameter specification the inconsistent
specification of seedSampleSet in the streamLine and wallBoundedStreamLine
functionObjects had to be corrected from

    // Seeding method.
    seedSampleSet   uniform;  //cloud; //triSurfaceMeshPointSet;

    uniformCoeffs
    {
        type        uniform;
        axis        x;  //distance;

        // Note: tracks slightly offset so as not to be on a face
        start       (-1.001 -0.05 0.0011);
        end         (-1.001 -0.05 1.0011);
        nPoints     20;
    }

to the simpler

    // Seeding method.
    seedSampleSet
    {
        type        uniform;
        axis        x;  //distance;

        // Note: tracks slightly offset so as not to be on a face
        start       (-1.001 -0.05 0.0011);
        end         (-1.001 -0.05 1.0011);
        nPoints     20;
    }

which also support the "<type>Coeffs" form

    // Seeding method.
    seedSampleSet
    {
        type        uniform;

        uniformCoeffs
        {
            axis        x;  //distance;

            // Note: tracks slightly offset so as not to be on a face
            start       (-1.001 -0.05 0.0011);
            end         (-1.001 -0.05 1.0011);
            nPoints     20;
        }
    }
2017-04-20 09:14:48 +01:00