mirrorMesh: Added support for cellLevel and pointLevel to support dynamic mesh refinement

Patch contributed by Mattijs Janssens
Resolves bug-report https://bugs.openfoam.org/view.php?id=2712

applications/utilities/mesh/manipulation/mirrorMesh/Make/options

@@ -1,5 +1,7 @@
 EXE_INC = \
+    -I$(LIB_SRC)/dynamicMesh/lnInclude \
     -I$(LIB_SRC)/finiteVolume/lnInclude
 
 EXE_LIBS = \
+    -ldynamicMesh \
     -lfiniteVolume

applications/utilities/mesh/manipulation/mirrorMesh/mirrorFvMesh.C

@@ -2,7 +2,7 @@
   =========                 |
   \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
    \\    /   O peration     |
-    \\  /    A nd           | Copyright (C) 2011-2016 OpenFOAM Foundation
+    \\  /    A nd           | Copyright (C) 2011-2017 OpenFOAM Foundation
      \\/     M anipulation  |
 -------------------------------------------------------------------------------
 License
@@ -42,8 +42,7 @@ Foam::mirrorFvMesh::mirrorFvMesh(const IOobject& io)
             IOobject::MUST_READ_IF_MODIFIED,
             IOobject::NO_WRITE
         )
-    ),
+    )
-    mirrorMeshPtr_(nullptr)
 {
     plane mirrorPlane(mirrorMeshDict_);
 
@@ -108,6 +107,21 @@ Foam::mirrorFvMesh::mirrorFvMesh(const IOobject& io)
     Info<< " New points: " << nNewPoints << endl;
     newPoints.setSize(nNewPoints);
 
+    // Construct new to old map
+    pointMapPtr_.reset(new labelList(newPoints.size()));
+    labelList& pointMap = pointMapPtr_();
+    // Insert old points
+    forAll(oldPoints, oldPointi)
+    {
+        pointMap[oldPointi] = oldPointi;
+    }
+    forAll(mirrorPointLookup, oldPointi)
+    {
+        pointMap[mirrorPointLookup[oldPointi]] = oldPointi;
+    }
+
+
+
     Info<< "Mirroring faces. Old faces: " << oldFaces.size();
 
     // Algorithm:
@@ -329,6 +343,10 @@ Foam::mirrorFvMesh::mirrorFvMesh(const IOobject& io)
     cellList newCells(2*oldCells.size());
     label nNewCells = 0;
 
+    // Construct new to old cell map
+    cellMapPtr_.reset(new labelList(newCells.size()));
+    labelList& cellMap = cellMapPtr_();
+
     // Grab the original cells.  Take care of face renumbering.
     forAll(oldCells, celli)
     {
@@ -342,6 +360,8 @@ Foam::mirrorFvMesh::mirrorFvMesh(const IOobject& io)
             nc[i] = masterFaceLookup[oc[i]];
         }
 
+        cellMap[nNewCells] = celli;
+
         nNewCells++;
     }
 
@@ -358,6 +378,8 @@ Foam::mirrorFvMesh::mirrorFvMesh(const IOobject& io)
             nc[i] = mirrorFaceLookup[oc[i]];
         }
 
+        cellMap[nNewCells] = celli;
+
         nNewCells++;
     }
 
@@ -365,15 +387,18 @@ Foam::mirrorFvMesh::mirrorFvMesh(const IOobject& io)
     Info<< "Mirroring cell shapes." << endl;
 
     Info<< nl << "Creating new mesh" << endl;
-    mirrorMeshPtr_ = new fvMesh
+    mirrorMeshPtr_.reset
     (
-        io,
+        new fvMesh
-        xferMove(newPoints),
+        (
-        xferMove(newFaces),
+            io,
-        xferMove(newCells)
+            xferMove(newPoints),
+            xferMove(newFaces),
+            xferMove(newCells)
+        )
     );
 
-    fvMesh& pMesh = *mirrorMeshPtr_;
+    fvMesh& pMesh = mirrorMeshPtr_();
 
     // Add the boundary patches
     List<polyPatch*> p(newPatchSizes.size());

applications/utilities/mesh/manipulation/mirrorMesh/mirrorFvMesh.H

@@ -2,7 +2,7 @@
   =========                 |
   \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
    \\    /   O peration     |
-    \\  /    A nd           | Copyright (C) 2011 OpenFOAM Foundation
+    \\  /    A nd           | Copyright (C) 2011-2017 OpenFOAM Foundation
      \\/     M anipulation  |
 -------------------------------------------------------------------------------
 License
@@ -55,7 +55,13 @@ class mirrorFvMesh
         IOdictionary mirrorMeshDict_;
 
         //- Mirrored mesh
-        fvMesh* mirrorMeshPtr_;
+        autoPtr<fvMesh> mirrorMeshPtr_;
+
+        //- Cell map
+        autoPtr<labelList> cellMapPtr_;
+
+        //- Point map
+        autoPtr<labelList> pointMapPtr_;
 
 
     // Private Member Functions
@@ -85,7 +91,19 @@ public:
         //- Return reference to mirror mesh
         const fvMesh& mirrorMesh() const
         {
-            return *mirrorMeshPtr_;
+            return mirrorMeshPtr_();
+        }
+
+        //- Mirrorred to original cell
+        const labelList& cellMap() const
+        {
+            return cellMapPtr_();
+        }
+
+        //- Mirrorred to original point
+        const labelList& pointMap() const
+        {
+            return pointMapPtr_();
         }
 };
 

applications/utilities/mesh/manipulation/mirrorMesh/mirrorMesh.C

@@ -2,7 +2,7 @@
   =========                 |
   \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
    \\    /   O peration     |
-    \\  /    A nd           | Copyright (C) 2011-2015 OpenFOAM Foundation
+    \\  /    A nd           | Copyright (C) 2011-2017 OpenFOAM Foundation
      \\/     M anipulation  |
 -------------------------------------------------------------------------------
 License
@@ -32,6 +32,8 @@ Description
 #include "argList.H"
 #include "Time.H"
 #include "mirrorFvMesh.H"
+#include "mapPolyMesh.H"
+#include "hexRef8Data.H"
 
 using namespace Foam;
 
@@ -39,18 +41,12 @@ using namespace Foam;
 
 int main(int argc, char *argv[])
 {
-
     #include "addOverwriteOption.H"
     #include "setRootCase.H"
     #include "createTime.H"
 
     const bool overwrite = args.optionFound("overwrite");
 
-    if (!overwrite)
-    {
-        runTime++;
-    }
-
     mirrorFvMesh mesh
     (
         IOobject
@@ -61,11 +57,71 @@ int main(int argc, char *argv[])
         )
     );
 
+    hexRef8Data refData
+    (
+        IOobject
+        (
+            "dummy",
+            mesh.facesInstance(),
+            polyMesh::meshSubDir,
+            mesh,
+            IOobject::READ_IF_PRESENT,
+            IOobject::NO_WRITE,
+            false
+        )
+    );
+
+    if (!overwrite)
+    {
+        runTime++;
+        mesh.setInstance(runTime.timeName());
+    }
+
+
     // Set the precision of the points data to 10
     IOstream::defaultPrecision(max(10u, IOstream::defaultPrecision()));
 
+    // Generate the mirrorred mesh
+    const fvMesh& mMesh = mesh.mirrorMesh();
+
+    const_cast<fvMesh&>(mMesh).setInstance(mesh.facesInstance());
     Info<< "Writing mirrored mesh" << endl;
-    mesh.mirrorMesh().write();
+    mMesh.write();
+
+    // Map the hexRef8 data
+    mapPolyMesh map
+    (
+        mesh,
+        mesh.nPoints(),         //nOldPoints,
+        mesh.nFaces(),          //nOldFaces,
+        mesh.nCells(),          //nOldCells,
+        mesh.pointMap(),        //pointMap,
+        List<objectMap>(0),     // pointsFromPoints,
+        labelList(0),           //faceMap,
+        List<objectMap>(0),     //facesFromPoints,
+        List<objectMap>(0),     //facesFromEdges,
+        List<objectMap>(0),     //facesFromFaces,
+        mesh.cellMap(),         //cellMap,
+        List<objectMap>(0),     //cellsFromPoints,
+        List<objectMap>(0),     //cellsFromEdges,
+        List<objectMap>(0),     //cellsFromFaces,
+        List<objectMap>(0),     //cellsFromCells,
+        labelList(0),           //reversePointMap,
+        labelList(0),           //reverseFaceMap,
+        labelList(0),           //reverseCellMap,
+        labelHashSet(0),        //flipFaceFlux,
+        labelListList(0),       //patchPointMap,
+        labelListList(0),       //pointZoneMap,
+        labelListList(0),       //faceZonePointMap,
+        labelListList(0),       //faceZoneFaceMap,
+        labelListList(0),       //cellZoneMap,
+        pointField(0),          //preMotionPoints,
+        labelList(0),           //oldPatchStarts,
+        labelList(0),           //oldPatchNMeshPoints,
+        autoPtr<scalarField>()  //oldCellVolumesPtr
+    );
+    refData.updateMesh(map);
+    refData.write();
 
     Info<< "End" << endl;
 

src/OpenFOAM/meshes/polyMesh/mapPolyMesh/mapPolyMesh.C

@@ -2,7 +2,7 @@
   =========                 |
   \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
    \\    /   O peration     |
-    \\  /    A nd           | Copyright (C) 2011-2016 OpenFOAM Foundation
+    \\  /    A nd           | Copyright (C) 2011-2017 OpenFOAM Foundation
      \\/     M anipulation  |
 -------------------------------------------------------------------------------
 License
@@ -90,24 +90,27 @@ Foam::mapPolyMesh::mapPolyMesh
     oldPatchNMeshPoints_(oldPatchNMeshPoints),
     oldCellVolumesPtr_(oldCellVolumesPtr)
 {
-    // Calculate old patch sizes
+    if (oldPatchStarts_.size())
-    for (label patchi = 0; patchi < oldPatchStarts_.size() - 1; patchi++)
     {
-        oldPatchSizes_[patchi] =
+        // Calculate old patch sizes
-            oldPatchStarts_[patchi + 1] - oldPatchStarts_[patchi];
+        for (label patchi = 0; patchi < oldPatchStarts_.size() - 1; patchi++)
-    }
-
-    // Set the last one by hand
-    const label lastPatchID = oldPatchStarts_.size() - 1;
-
-    oldPatchSizes_[lastPatchID] = nOldFaces_ - oldPatchStarts_[lastPatchID];
-
-    if (polyMesh::debug)
-    {
-        if (min(oldPatchSizes_) < 0)
         {
-            FatalErrorInFunction
+            oldPatchSizes_[patchi] =
-                << abort(FatalError);
+                oldPatchStarts_[patchi + 1] - oldPatchStarts_[patchi];
+        }
+
+        // Set the last one by hand
+        const label lastPatchID = oldPatchStarts_.size() - 1;
+
+        oldPatchSizes_[lastPatchID] = nOldFaces_ - oldPatchStarts_[lastPatchID];
+
+        if (polyMesh::debug)
+        {
+            if (min(oldPatchSizes_) < 0)
+            {
+                FatalErrorInFunction
+                    << abort(FatalError);
+            }
         }
     }
 }

src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8/hexRef8Data.C

@@ -309,6 +309,29 @@ void Foam::hexRef8Data::sync(const IOobject& io)
 }
 
 
+void Foam::hexRef8Data::updateMesh(const mapPolyMesh& map)
+{
+    if (cellLevelPtr_.valid())
+    {
+        cellLevelPtr_() = labelList(cellLevelPtr_(), map.cellMap());
+        cellLevelPtr_().instance() = map.mesh().facesInstance();
+    }
+    if (pointLevelPtr_.valid())
+    {
+        pointLevelPtr_() = labelList(pointLevelPtr_(), map.pointMap());
+        pointLevelPtr_().instance() = map.mesh().facesInstance();
+    }
+
+    // No need to distribute the level0Edge
+
+    if (refHistoryPtr_.valid() && refHistoryPtr_().active())
+    {
+        refHistoryPtr_().updateMesh(map);
+        refHistoryPtr_().instance() = map.mesh().facesInstance();
+    }
+}
+
+
 void Foam::hexRef8Data::distribute(const mapDistributePolyMesh& map)
 {
     if (cellLevelPtr_.valid())

src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8/hexRef8Data.H

@@ -2,7 +2,7 @@
   =========                 |
   \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
    \\    /   O peration     |
-    \\  /    A nd           | Copyright (C) 2015-2016 OpenFOAM Foundation
+    \\  /    A nd           | Copyright (C) 2015-2017 OpenFOAM Foundation
      \\/     M anipulation  |
 -------------------------------------------------------------------------------
 License
@@ -117,6 +117,9 @@ public:
         //  (even if they don't have a mesh). Used by redistributePar.
         void sync(const IOobject& io);
 
+        //- In-place update for topology changes
+        void updateMesh(const mapPolyMesh&);
+
         //- In-place distribute
         void distribute(const mapDistributePolyMesh&);