Commit Graph

1674 Commits

Author SHA1 Message Date
c13421b10a Matrix: Added (i, j) addressing to allow support for addressing blocks of the matrix
This change brings OpenFOAM into line with the standard matrix
addressing in other C++ libraries for better interoperability.
2016-03-20 19:44:29 +00:00
767ffc3c7b Matrix: Replace the row-start pointer array with computed offsets
The row-start pointer array provided performance benefits on old
computers but now that computation is often cache-miss limited the
benefit of avoiding a integer multiply is more than offset by the
addition memory access into a separately allocated array.

With the new addressing scheme LUsolve is 15% faster.
2016-03-20 15:00:36 +00:00
59c9f3594e Updated header 2016-03-20 10:35:35 +00:00
9209192b65 objectRegistry: Set the path of the Time objectRegistry
Patch contributed by Bruno Santos
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2030
2016-03-20 10:31:48 +00:00
3c3a02e61c sampledSet/midPoint, midPointAndFace: Improved robustness of the mid-point cell seaching and selecting 2016-03-19 21:22:09 +00:00
9f80c727e5 sampledSet/face: Improved robustness of face selection 2016-03-19 21:21:23 +00:00
712b07d478 Field: Added zero() constructor 2016-03-19 21:20:33 +00:00
248d6065eb Updated header 2016-03-19 21:20:18 +00:00
9dc14af017 SubList, SubField: Added assignment to UList 2016-03-19 21:19:14 +00:00
e809171540 SpatialVector: Added cross-product and dual cross-product operators
SpatialTensor: Added SpatialVector cross-product and dual cross-product -> SpatialTensor operators
2016-03-18 21:52:27 +00:00
e3bbe40748 SphericalTensor/Identity: Added dual form 2016-03-18 21:52:00 +00:00
0a0e282090 Update header 2016-03-18 11:47:59 +00:00
4ab535bdda Identity: special type derived from SphericalTensor to provide the concept of identity (I)
Allows efficient operators to be defined for the interaction between
types and the equivalent identity.
2016-03-18 11:45:45 +00:00
f528f844db SpatialVector: Added component access member functions
wx(), wy(), wz(), lx(), ly() and lz()
2016-03-17 22:12:48 +00:00
4cc909f1ed spatialTransform: Compact representation of the Plücker spatial transformation tensor
in terms of the rotation tensor \c E and translation vector \c r .

  See Chapter 2 and Appendix A in reference:
     Featherstone, R. (2008).
     Rigid body dynamics algorithms.
     Springer.

    This work is sponsored by Carnegie Wave Energy Ltd

Henry G. Weller
CFD Direct
2016-03-17 20:31:36 +00:00
e2d1156ddd primitives/transform: Added functios to generate rotation tensor about the given axis 2016-03-17 18:09:04 +00:00
69dd56b9dd primitives/transform: Added functions to generate rotation tensors about the individual axes 2016-03-17 18:05:11 +00:00
8eb32a21d7 SpatialTensor: Added constructor from 4 Tensor blocks 2016-03-17 09:14:25 +00:00
926c29e95a reactingEulerFoam: Moved fluid.correctThermo() into energy corrector loop
to update the interfacial temperature.
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2029
2016-03-17 08:05:08 +00:00
156b2d9791 thermoSingleLayer: Output the mean film temperature in addition to max and min 2016-03-16 15:34:57 +00:00
6ee4cad870 paraFoam: Updated instructions to build the reader modules
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2027
2016-03-16 09:24:25 +00:00
2e88689c3b lagrangian::StandardWallInteraction: accumulate escaping mass
Do not set accumulated properties to 0 on output

Updates provided by Karl Meredith
2016-03-15 22:37:48 +00:00
fa1dfa813b MatrixSpace::Block: Added "dereference" operator for conversion to sub-tensor 2016-03-15 22:36:56 +00:00
c26d5ee31a driftFluxFoam/relativeVelocityModels/general/general:: Corrected construction of residualAlpha 2016-03-15 20:33:06 +00:00
05455d50ea src/OpenFOAM/primitives/spatialVectorAlgebra: New classes to support spatial vector algebra
Based on definitions in chapter 2 of the book:
    Featherstone, R. (2008).
    Rigid body dynamics algorithms.
    Springer.

This work is sponsored by Carnegie Wave Energy Ltd
2016-03-15 18:14:03 +00:00
6057695f4f RowVector: New 3D row-vector class derived from MatrixSpace
The transpose '.T()' of a RowVector returns a Vector and vice versa.
2016-03-15 15:13:41 +00:00
04e8de2cf0 transformPoints, surfaceTransformPoints: Updated quaternion construction from Euler-angles
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2024
2016-03-14 16:40:35 +00:00
06fcefebd2 VectorSpace: Changes loop logic to avoid warning from gcc-4.5 2016-03-14 15:36:42 +00:00
7037737d03 Updated Doxygen documentation and files
Contributed by Bruno Santos
Resolves patch report http://www.openfoam.org/mantisbt/view.php?id=2023

Update online documentation http://openfoam.github.io/Documentation-dev/html/
2016-03-14 11:00:24 +00:00
dbe5d5288b quaternion: Added generalized construction from and conversion to Euler-angles
The particular rotation sequence is specified via the enumeration:

    //- Euler-angle rotation sequence
    enum rotationSequence
    {
        ZYX, ZYZ, ZXY, ZXZ, YXZ, YXY, YZX, YZY, XYZ, XYX, XZY, XZX
    };

and provided as an argument to the constructor from Euler-angles

    //- Construct a quaternion given the three Euler angles:
    inline quaternion
    (
        const rotationSequence rs,
        const vector& angles
    );

and conversion to Euler-angles:

    //- Return a vector of euler angles corresponding to the
    //  specified rotation sequence
    inline vector eulerAngles(const rotationSequence rs) const;
2016-03-14 08:07:42 +00:00
36f19c88c4 src/sampling/sampledSurface/isoSurface: Correct referencing to temporary fields
Patch provided by Mattijs Janssens
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1487
2016-03-12 11:50:04 +00:00
3ba1d17660 MatrixSpace: 2D (i-j) specialization of VectorSpace
Provides '(i, j)' element access and general forms of inner and outer
products, transpose etc. for square and rectangular VectorSpaces.

VectorSpaces default to be column-vectors as before whereas row-vectors
may be represented as 1xn MatrixSpaces.  In the future it may be
preferable to create a specializations of VectorSpace for column- and
maybe row-vectors but it would add complexity to MatrixSpace to handle
all the type combinations.

Tensor is now a 3x3 specialization of MatrixSpace.

Sub-block const and non-const access is provided via the
'.block<SubTensor, RowStart, ColStart>()' member functions.  Consistent
sub-block access is also provide for VectorSpace so that columns of
MatrixSpaces may be accessed and substituted.

These new classes will be used to create a more extensive set of
primitive vector and tensor types over the next few weeks.

Henry G. Weller
CFD Direct
2016-03-12 10:41:18 +00:00
bb49210567 Corrected typo 2016-03-11 09:46:48 +00:00
930d750bfd Matrix: Switch n() and m() so that now m() = number of rows and n() = number of columns
For consistency with current references and other numerics libraries
2016-03-10 22:53:09 +00:00
9711774b28 floatTensor: Tensor<float> 2016-03-10 12:45:42 +00:00
53c641e737 VectorSpace: Change template parameter from nCmpt to Ncmpts for consistency with other template classes 2016-03-10 12:44:53 +00:00
f3ca360300 Vector: Add constructor from Foam::zero 2016-03-10 12:44:25 +00:00
f2b111e203 src/OpenFOAM: changed template rank type from int to Foam::direction
Foam::direction is an unsigned type which makes it easier for the
compiler to pickup and report errors in the instantiation of
VectorSpaces and associated types.
2016-03-09 10:10:28 +00:00
8c1f5eae39 etc/cshrc, etc/config.csh: foamCompiler -> WM_COMPILER_TYPE
for consistency with etc/bashrc and etc/config.sh

See commit 711ec0e39d
2016-03-09 09:05:35 +00:00
41035d1643 bin/tools/foamConfigurePaths: foamCompiler -> WM_COMPILER_TYPE 2016-03-09 09:05:07 +00:00
711ec0e39d etc/bashrc, etc/config.sh: Updates provided by Bruno Santos:
1. "foamCompiler" was changed to a more permanent "WM_COMPILER_TYPE"
    environment variable, so that it can be used by 3rd party
    installation scripts, such as "makeGcc", "makeLLVM" and so on. More
    on this will be provided in issue #1215.

 2. The script functions such as "_foamSource()" and "_foamAddPath()"
    were moved to a new file "etc/config.sh/functions". It has the
    ability to set or unset, depending on whether "WM_BASH_FUNCTIONS" is
    defined or not. This allows for these functions to be reused by
    other scripts, such as "makeGcc".

 3. The script "etc/config.sh/CGAL" relies on whether a local
    environment variable "SOURCE_CGAL_VERSIONS_ONLY" is defined or not,
    so that it will load only the version settings if it's defined. This
    is to make it easier to call this script from "makeCGAL". Although
    it still feels a bit of a clunky hack, but I didn't manage to deduce
    any other way we could do this :( I didn't add indentation within
    the if-block, to make it easier to read the changes. In addition,
    the local variable "common_path" is used to shorten the length of
    the lines and use slightly less repeated code.

 4. Added another new script "etc/config.sh/compiler", which has only
    the version numbers for the compilers taken out from the "settings"
    file. It currently depends on "WM_COMPILER_TYPE" for setting the
    variables, the same way it did with "foamCompiler". This script is
    now always sourced from the "settings" file, for the following
    reasons:

   - "makeGCC" and "makeLLVM" can now take advantage of this script file.

   - The example "compiler" script (detailed next) can rely on this
     script file and then override parameters on-demand, as well as
     allowing for system compilers to have dedicated settings, such as
     setting "WM_CC". This is similar to how the example environment
     script for "paraview" works.

 5. To the script "etc/config.sh/example/compiler" were added a few more examples:

   - It now starts with a block where it first loads the default "compiler" script.

   - Has a "WM_COMPILER=Gcc48u" case example for when we try to use GCC
     4.8 in Ubuntu 15.10. This is just to give the idea that in a
     particular system, we might have several system-wide compiler
     versions. For example, in Ubuntu 15.10, there is GCC 4.7, 4.8 and
     5.2, which could be used for testing performances or compatibility
     with some other 3rd party library.

   - Has the "WM_COMPILER=Icc" case example, related to the original bug
     report, where "WM_CC=icc" and "WM_CXX=icpc", so that the user then
     simply copies this file to their own local preferences folder.

 6. Small bug fix in "etc/config.sh/mpi", where unsetting "minBufferSize" was missing at the end of the script.

 7. Small change in "etc/config.sh/paraview", where "CMAKE_ROOT" is set
    along with "CMAKE_HOME". This is due to a rare issue that occurs on
    people's systems where they have a custom system-wide CMake version
    installed and which is used by having "CMAKE_ROOT" set on that
    environment. This can mess up OpenFOAM's custom ParaView builds,
    given that conflicting CMake versions can lead to not building
    ParaView at all.

   - For more details about "CMAKE_ROOT":
     https://cmake.org/Wiki/CMake_Useful_Variables [^]

 8. The scripts "_foamAddPath _foamAddLib _foamAddMan" were not being
    unset at the end of "settings". They are now unset at the end of
    "bashrc", through a call to the new double-use "functions" script.

Additionally all references to "foamCompiler" have been changed to
"WM_COMPILER_TYPE".

See also http://www.openfoam.org/mantisbt/view.php?id=1232
2016-03-09 09:01:09 +00:00
6cc3b057ec wmake/src/Makefile: Override WM_COMPILE_OPTION with Opt for optimized compilation of the wmake utilities
Resolves bug-report http://openfoam.org/mantisbt/view.php?id=2021
2016-03-08 14:24:11 +00:00
9ef051dd18 fixedShearStressFvPatchVectorField: Corrected patch nuEff access
Resolves bug-report http://openfoam.org/mantisbt/view.php?id=2020
2016-03-08 14:14:39 +00:00
0ef2082dad JohnsonJacksonParticle*FvPatchScalarField.C: Corrected null-construction initialization
Resolves bug-report http://openfoam.org/mantisbt/view.php?id=2022
2016-03-08 14:13:05 +00:00
45d092f2e0 src/OpenFOAM/primitives: Moved the standard static data members for vector and tensor types into VectorSpace
This simplifies the code easing maintenance and the addition of other
VectorSpace types.
2016-03-08 10:57:41 +00:00
9bc50312eb simpleFoam, SRFSimpleFoam: Added momentumPredictor option 2016-03-07 15:27:01 +00:00
db675599ea SRFWallVelocityFvPatchVectorField: New BC for walls rotating in the SRF
Wall-velocity condition to be used in conjunction with the single rotating
    frame (SRF) model (see: FOAM::SRFModel)

    The condition applies the appropriate rotation transformation in time and
    space to determine the local SRF velocity of the wall.

        \f[
            U_p = - U_{p,srf}
        \f]

    where
    \vartable
        U_p     = patch velocity [m/s]
        U_{p,srf} = SRF velocity
    \endvartable

    The normal component of \f$ U_p \f$ is removed to ensure 0 wall-flux even
    if the wall patch faces are irregular.

    \heading Patch usage

    Example of the boundary condition specification:
    \verbatim
    myPatch
    {
        type            SRFWallVelocity;
        value           uniform (0 0 0);    // Initial value
    }
    \endverbatim
2016-03-07 15:25:52 +00:00
4db6b030e2 Tensor: Added inv() member function 2016-03-07 15:25:27 +00:00
eae4c1289d polyMeshFilter.H: Updated indentation 2016-03-06 21:35:02 +00:00
4ef64b2f11 tutorials/incompressible/porousSimpleFoam/straightDuctImplicit/Allrun.pre: Updated for latest version of collapseEdges 2016-03-06 21:34:31 +00:00