Commit Graph

346 Commits

Author SHA1 Message Date
b3f4d5855d functionObjects: Simplified the handling of the post-processing mode
Replaced the 'postProcess' argument to the 'write' and 'execute'
functions with the single static member 'postProcess' in the
functionObject base-class.
2016-06-13 08:36:03 +01:00
41c2e4bc11 Utilities patchAverage and patchIntegrate replaced by postProcess
e.g.
    postProcess -func 'patchAverage(name=inlet,p)'
    postProcess -func 'patchIntegrate(name=inlet,p)'
2016-06-12 22:32:15 +01:00
621432fea5 checkMesh: Added writing of faceSets and cellSets containing errors
In parallel the sets are reconstructed. e.g.

mpirun -np 6 checkMesh -parallel -allGeometry -allTopology -writeSets vtk

will create a postProcessing/ folder with the vtk files of the
(reconstructed) faceSets and cellSets.

Also improved analysis of disconnected regions now also checks for point
connectivity with is useful for detecting if AMI regions have duplicate
points.

Patch contributed by Mattijs Janssens
2016-06-12 20:51:07 +01:00
e1079504cd functionObjects: 'valueOutput' -> 'writeFields' 2016-06-11 15:25:00 +01:00
017242afe4 foamList: Updated handling of switches and removed the '-redundant' option which does not work 2016-06-11 15:24:01 +01:00
a495f4d738 foamDebugSwitches -> foamList -debug 2016-06-10 13:34:58 +01:00
1bd2bfc754 UOPstream: corrected write(const char* str)
Resolved bug-report http://bugs.openfoam.org/view.php?id=2115
2016-06-10 13:33:40 +01:00
6221186311 functionObjects::writeRegisteredObject -> functionObjects::writeObjects
Added configuration file etc/caseDicts/postProcessing/fields/writeObjects
2016-06-10 08:28:13 +01:00
ca45cf1614 DynamicList: minor cleanup 2016-06-04 17:45:11 +01:00
dc4c881f25 postProcess: Added '-list' option to list the available configured functionObjects 2016-06-01 16:28:07 +01:00
a0c343ab9f functionObjectList::readFunctionObject: Add support for functionObject arguments containing '()'s 2016-05-31 17:47:21 +01:00
f823a0ceee HashTable: Correct error messages
Resolves bug-report http://bugs.openfoam.org/view.php?id=2106
2016-05-31 17:18:23 +01:00
b9fc25359a Updated headers 2016-05-31 17:18:14 +01:00
8a915d0617 includeEntry, includeEtcEntry, includeIfPresentEntry: report -> log
for consistency with the 'Log' macro.
2016-05-31 17:17:24 +01:00
dd20d90868 includeFuncEntry: Added support for function arguments compatible with the '-func' post-processing option
e.g.

functions
{
    #includeFunc mag(U)
}

executes 'mag' on the field 'U' writing the field 'mag(U)'.

The equivalent post-processing command is

postProcess -func 'mag(U)'
2016-05-31 14:43:44 +01:00
706ec804fd Added forward declaration of friend functions 2016-05-30 13:21:29 +01:00
691e7186b4 ACMI: Corrected conservation issue
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2057
2016-05-30 08:29:11 +01:00
3980082fe2 Added forward declaration of friend functions 2016-05-29 22:28:37 +01:00
8b672f0f1a postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
7a3f939aae etcFiles: Added functions to find directories in the 'etc' directories
'findEtcFiles' moved from OSspecific to 'etcFiles' as it is not OS-specific
2016-05-28 18:55:37 +01:00
f1a5196adf ReadFields: Added functions to read selected fields and store in the objectRegistry 2016-05-26 22:59:08 +01:00
c2328cba3c fileName: Added recursive directory search function
//- Recursively search the given directory for the file
    //  returning the path relative to the directory or
    //  fileName::null if not found
    fileName search(const word& file, const fileName& directory);
2016-05-26 21:43:16 +01:00
0c34135438 SafeFatalIOError: Updated to print correct file and line number
Resolves bug-report http://bugs.openfoam.org/view.php?id=2102
Patch contributed by Mattijs Janssens
2016-05-26 17:40:37 +01:00
bf71b29434 messageStream: Updated 'DebugVar' to handle multi-line object output
Resolves feature-request http://bugs.openfoam.org/view.php?id=2101
Patch contributed by Mattijs Janssens
2016-05-26 14:57:15 +01:00
b50e21467f regionFunctionObject: Indent 'write' messages 2016-05-26 10:14:51 +01:00
48e5817039 messageStream: Added 'Log' macro which outputs to 'Info' if 'log' is true
regionFunctionObject: moved 'log_' to public 'log' to support the 'Log' macro
2016-05-25 18:19:46 +01:00
0477b8f50c regionFunctionObject: Moved the field/object maintenance functions from fvMeshFunctionObject into regionFunctionObject 2016-05-25 16:26:57 +01:00
e9a37fee34 postProcess: catch missing field errors to process further time-directories 2016-05-25 15:39:37 +01:00
b454b7ce43 functionObjects::regionFunctionObject: Added optional 'log' entry (defaults to true) 2016-05-24 09:03:41 +01:00
39cf529866 DimensionedScalarField, GeometricScalarField: Added more rigorous dimension-checking for 'pow' functions 2016-05-23 12:04:02 +01:00
8f75fa5d46 tmp: Added 'move' constructor to simplify return of unchanged 'tmp' arguments. 2016-05-23 12:01:36 +01:00
2d1573d2ed transformGeometricField: Use '.ref()' to obtain non-const access to a temporary 2016-05-22 14:29:59 +01:00
f8f39d54ae tmp: Allow '.ref()' for const 'tmp'
const-ness of the stored object is checked at run-time.
2016-05-21 23:10:58 +01:00
7c6b0e684f functionObjectList: Filter unnecessary warning from new 'libs' entry 2016-05-21 23:10:06 +01:00
2215db630a functionObjectList: Added support for 'libs' to load libraries for all functionObjects
e.g.

functions
{
    libs ("libfieldFunctionObjects.so");

    div
    {
        type            div;
        field           U;
        executeControl  writeTime;
        writeControl    writeTime;
    }

    Q
    {
        type            Q;
        executeControl  writeTime;
        writeControl    writeTime;
    }
}
2016-05-21 20:01:42 +01:00
abd4b881a0 codedBase.H: Minor reformat 2016-05-21 13:56:27 +01:00
ffbc4c8c88 tmp, autoPtr: Provide a typedef 'Type' to the stored type 2016-05-21 13:55:47 +01:00
1387f95858 Updated header 2016-05-19 09:40:29 +01:00
08e22d3af0 Updated code comments 2016-05-19 09:40:17 +01:00
ae9889697e Scalar: Documented 'posPart' and 'negPart' 2016-05-19 09:39:45 +01:00
f2331a8587 dynamicCode: Renamed 'redirectType' to 'name' to clarify the purpose
of the entry which is to provide the name of the generated class.

'redirectType' is supported for backward-compatibility.
2016-05-18 23:10:42 +01:00
02f0d095ed IOOutputFilter: Updated the signature of the 'write' function to correspond to the new functionObject 2016-05-18 23:09:26 +01:00
4500971827 Further standardization of loop index naming: pointI -> pointi, patchI -> patchi 2016-05-18 21:20:42 +01:00
982ebe6f59 functionObjects::partialWrite: Redundant and removed
the equivalent functionality is provided by the writeRegisteredObject
   functionObject in a MUCH simpler, easier and extensible manner.

functionObject: Removed the now redundant 'timeSet' function.
2016-05-18 12:23:29 +01:00
38b99504c0 dynamicCode: the "code" entry is now optional
codedFunctionObject: Added the "codeWrite" entry
    for the "write" function for consistency.
    The previous method of using the "code" entry for the "write"
    function was inconsistent and very confusing.
2016-05-18 12:20:03 +01:00
83517fac63 timeControlFunctionObject: Updated the control logic in the 'end' function
to correspond to the new default behavior of the 'end' function in
functionObject which now calls 'execute' then 'write'.
2016-05-18 09:05:24 +01:00
ca60658aee functionObject: Call 'execute' then 'write' from the default 'end' function. 2016-05-17 22:56:47 +01:00
8f45162c6c writeRegisteredObject: Now writes the <time>/uniform/time dictionary 2016-05-17 12:36:49 +01:00
18725ed3ac functionObjects: Renamed dictionary entry 'functionObjectLibs' -> 'libs'
This changes simplifies the specification of functionObjects in
controlDict and is consistent with the 'libs' option in controlDict to
load special solver libraries.

Support for the old 'functionObjectLibs' name is supported for backward compatibility.
2016-05-16 22:09:01 +01:00
9353abcabe functionObjects: Added regionFunctionObject and fvMeshFunctionObject intermediate base-classes
to simplify writing common functionObjects and avoid unnecessary code duplication
2016-05-16 12:20:44 +01:00