Commit Graph

51 Commits

Author SHA1 Message Date
b3f4d5855d functionObjects: Simplified the handling of the post-processing mode
Replaced the 'postProcess' argument to the 'write' and 'execute'
functions with the single static member 'postProcess' in the
functionObject base-class.
2016-06-13 08:36:03 +01:00
41c2e4bc11 Utilities patchAverage and patchIntegrate replaced by postProcess
e.g.
    postProcess -func 'patchAverage(name=inlet,p)'
    postProcess -func 'patchIntegrate(name=inlet,p)'
2016-06-12 22:32:15 +01:00
e1079504cd functionObjects: 'valueOutput' -> 'writeFields' 2016-06-11 15:25:00 +01:00
6221186311 functionObjects::writeRegisteredObject -> functionObjects::writeObjects
Added configuration file etc/caseDicts/postProcessing/fields/writeObjects
2016-06-10 08:28:13 +01:00
dc4c881f25 postProcess: Added '-list' option to list the available configured functionObjects 2016-06-01 16:28:07 +01:00
a0c343ab9f functionObjectList::readFunctionObject: Add support for functionObject arguments containing '()'s 2016-05-31 17:47:21 +01:00
dd20d90868 includeFuncEntry: Added support for function arguments compatible with the '-func' post-processing option
e.g.

functions
{
    #includeFunc mag(U)
}

executes 'mag' on the field 'U' writing the field 'mag(U)'.

The equivalent post-processing command is

postProcess -func 'mag(U)'
2016-05-31 14:43:44 +01:00
8b672f0f1a postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
b50e21467f regionFunctionObject: Indent 'write' messages 2016-05-26 10:14:51 +01:00
48e5817039 messageStream: Added 'Log' macro which outputs to 'Info' if 'log' is true
regionFunctionObject: moved 'log_' to public 'log' to support the 'Log' macro
2016-05-25 18:19:46 +01:00
0477b8f50c regionFunctionObject: Moved the field/object maintenance functions from fvMeshFunctionObject into regionFunctionObject 2016-05-25 16:26:57 +01:00
e9a37fee34 postProcess: catch missing field errors to process further time-directories 2016-05-25 15:39:37 +01:00
b454b7ce43 functionObjects::regionFunctionObject: Added optional 'log' entry (defaults to true) 2016-05-24 09:03:41 +01:00
7c6b0e684f functionObjectList: Filter unnecessary warning from new 'libs' entry 2016-05-21 23:10:06 +01:00
2215db630a functionObjectList: Added support for 'libs' to load libraries for all functionObjects
e.g.

functions
{
    libs ("libfieldFunctionObjects.so");

    div
    {
        type            div;
        field           U;
        executeControl  writeTime;
        writeControl    writeTime;
    }

    Q
    {
        type            Q;
        executeControl  writeTime;
        writeControl    writeTime;
    }
}
2016-05-21 20:01:42 +01:00
02f0d095ed IOOutputFilter: Updated the signature of the 'write' function to correspond to the new functionObject 2016-05-18 23:09:26 +01:00
982ebe6f59 functionObjects::partialWrite: Redundant and removed
the equivalent functionality is provided by the writeRegisteredObject
   functionObject in a MUCH simpler, easier and extensible manner.

functionObject: Removed the now redundant 'timeSet' function.
2016-05-18 12:23:29 +01:00
83517fac63 timeControlFunctionObject: Updated the control logic in the 'end' function
to correspond to the new default behavior of the 'end' function in
functionObject which now calls 'execute' then 'write'.
2016-05-18 09:05:24 +01:00
ca60658aee functionObject: Call 'execute' then 'write' from the default 'end' function. 2016-05-17 22:56:47 +01:00
18725ed3ac functionObjects: Renamed dictionary entry 'functionObjectLibs' -> 'libs'
This changes simplifies the specification of functionObjects in
controlDict and is consistent with the 'libs' option in controlDict to
load special solver libraries.

Support for the old 'functionObjectLibs' name is supported for backward compatibility.
2016-05-16 22:09:01 +01:00
9353abcabe functionObjects: Added regionFunctionObject and fvMeshFunctionObject intermediate base-classes
to simplify writing common functionObjects and avoid unnecessary code duplication
2016-05-16 12:20:44 +01:00
91aba2db2e functionObjects: rewritten to all be derived from 'functionObject'
- Avoids the need for the 'OutputFilterFunctionObject' wrapper
  - Time-control for execution and writing is now provided by the
    'timeControlFunctionObject' which instantiates the processing
    'functionObject' and controls its operation.
  - Alternative time-control functionObjects can now be written and
    selected at run-time without the need to compile wrapped version of
    EVERY existing functionObject which would have been required in the
    old structure.
  - The separation of 'execute' and 'write' functions is now formalized in the
    'functionObject' base-class and all derived classes implement the
    two functions.
  - Unnecessary implementations of functions with appropriate defaults
    in the 'functionObject' base-class have been removed reducing
    clutter and simplifying implementation of new functionObjects.
  - The 'coded' 'functionObject' has also been updated, simplified and tested.
  - Further simplification is now possible by creating some general
    intermediate classes derived from 'functionObject'.
2016-05-15 16:40:01 +01:00
3c272484c5 functionObjects: Separated 'execute' and 'write' functions to simplify support for post-processing 2016-05-13 09:05:29 +01:00
758dfc2c1f Standardized the naming of functions which control the writing of fields etc.
to have the prefix 'write' rather than 'output'

So outputTime() -> writeTime()

but 'outputTime()' is still supported for backward-compatibility.

Also removed the redundant secondary-writing functionality from Time
which has been superseded by the 'writeRegisteredObject' functionObject.
2016-05-12 17:38:01 +01:00
71290b4d9e functionObjects: Changed options 'outputControl' -> 'writeControl' and 'outputInterval' -> 'writeInterval'
for consistency with the time controls in controlDict and to avoid
unnecessary confusion.  All code and tutorials have been updated.

The old names 'outputControl' and 'outputInterval' are but supported for
backward compatibility but deprecated.
2016-05-12 11:38:11 +01:00
e1205379eb Doxygen documentation: Use C++-style comments for enumeration elements 2016-05-11 23:10:42 +01:00
5bd03e0632 OutputFilterFunctionObject: Removed support for "dictionary" option
Superseded by the more general #include dictionary directive.
2016-05-11 23:08:48 +01:00
6cde38d65b OutputFilterFunctionObject: Simplify construction 2016-05-11 14:40:55 +01:00
901f6cde1d functionObjects: Removed the redundant "viable" member function
Construction failure and recovery is not handled with exceptions in functionObjectList
2016-05-11 12:57:17 +01:00
6960d664aa functionObjects: Removed redundant "start()" member function 2016-05-11 10:20:39 +01:00
4b54fb9f9d functionObjectList: Print the messages from errors caught during functionObject construction
Exit on FatalIOError
2016-05-11 10:19:07 +01:00
de7ac625e4 functionObjectList: Rationalized and simplified the handling of disabled functionObjects
Simplified and generalized the handling of functionObjects which fail to
construct by removing them from the list rather than maintaining an
"enabled" switch in each functionObject.
2016-05-11 09:03:52 +01:00
3be1d14af8 execFlowFunctionObjects: Replaced with script providing instructions to use the '-postProcess' option 2016-05-09 17:02:00 +01:00
19aefe5a26 applications/solvers/combustion: Added -postProcess option
See also commit 30e2f912e5
2016-05-09 14:51:21 +01:00
15545786b4 applications/solvers: Added -postProcess option
See also commit 30e2f912e5
2016-05-09 14:08:15 +01:00
4cadaeb3cc applications/solvers/multiphase: Added -postProcess option
See also commit 30e2f912e5
2016-05-08 20:57:08 +01:00
30e2f912e5 simpleFoam: Added experimental "-postProcess" option
Executes application functionObjects to post-process existing results.

    If the "dict" argument is specified the functionObjectList is constructed
    from that dictionary otherwise the functionObjectList is constructed from
    the "functions" sub-dictionary of "system/controlDict"

    Multiple time-steps may be processed and the standard utility time
    controls are provided.

This functionality is equivalent to execFlowFunctionObjects but in a
more efficient and general manner and will be included in all the
OpenFOAM solvers if it proves effective and maintainable.

The command-line options available with the "-postProcess" option may be
obtained by

simpleFoam -help -postProcess

Usage: simpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

Henry G. Weller
CFD Direct Ltd.
2016-05-08 09:33:46 +01:00
71a448d66f functionObjects: Renamed option "adjustableTime" -> "adjustableRunTime" for consistency with Time 2016-05-07 09:32:00 +01:00
fff57bf797 functionObjects: Updated documentation 2016-05-04 21:01:22 +01:00
97668c21a3 functionObjects: Moved functionObjects namespace documentation into functionObject.H 2016-05-04 13:56:36 +01:00
f83975a701 functionObjects: Moved into the functionObjects namespace and rationalized and simplified failable construction
Rather than requiring each functionObject to handle failed construction
internally (using the active_ flag) the static member function "viable"
is provided which returns true if construction of the functionObject is
likely to be successful.  Failed construction is then handled by the
wrapper-class which constructs the functionObject,
e.g. "OutputFilterFunctionObject".
2016-05-02 16:28:24 +01:00
7155ef61ae functionObjectFile: Separated into functionObjectFile and functionObjectFiles
functionObjectFile provides basic directory, file and formatting functions
functionObjectFiles provides multi-file cache
2016-04-30 09:18:42 +01:00
7037737d03 Updated Doxygen documentation and files
Contributed by Bruno Santos
Resolves patch report http://www.openfoam.org/mantisbt/view.php?id=2023

Update online documentation http://openfoam.github.io/Documentation-dev/html/
2016-03-14 11:00:24 +00:00
99c000fc94 Rationalized the indentation of C-preprocessor directives 2016-02-29 15:42:03 +00:00
016aad0d72 functionObjects: Format time according to the specification in controlDict
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1921
2015-11-20 13:22:51 +00:00
d5b4448e1a src/OpenFOAM: Update ...ErrorIn -> ...ErrorInFunction
Avoids the clutter and maintenance effort associated with providing the
function signature string.
2015-11-08 12:23:52 +00:00
03494fef5d Updated notImplemented -> NotImplemented
The new NotImplemented macro uses __PRETTY_FUNCTION__ for GNU compatible
compilers otherwise __func__ to provide the function name string.
2015-11-01 10:26:37 +00:00
fdd1beccf4 functionObjectFile: Use wordList rather than wordHashSet to maintain order
Change based on patch provided by Hassan Kassem
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1796
2015-08-05 17:38:31 +01:00
77bf182edc Resolved issues with virtual function inheritance and warning from clang
Also removed __GNUC__ conditional compilation statements which are no
longer needed.
2015-07-17 12:11:37 +01:00
db4ac98fd8 faceSource: Writing the total area of the faceSource (sum(magSf)) for each time is now optional
Previous behavior which may be useful for moving-mesh cases can be
selected using the optional entry:
    writeTotalArea  yes;

The initial total area is written in the log and data file header e.g.:

 #   Source : faceZone f0
 #   Faces  : 8
 #   Area   : 1.063860e-02
2015-04-26 16:32:19 +01:00