Files
OpenFOAM-6/applications/utilities/mesh/manipulation/topoSet/topoSet.C
Will Bainbridge 025e48373b fileHandler: Added flush method
This method waits until all the threads have completed IO operations and
then clears any cached information about the files on disk. This
replaces the deactivation of threading by means of zeroing the buffer
size when writing and reading of a file happen in sequence. It also
allows paraFoam to update the list of available times.

Patch contributed by Mattijs Janssens
Resolves bug report https://bugs.openfoam.org/view.php?id=2962
2018-06-27 15:25:20 +01:00

383 lines
11 KiB
C

/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2018 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
Application
topoSet
Description
Operates on cellSets/faceSets/pointSets through a dictionary.
\*---------------------------------------------------------------------------*/
#include "argList.H"
#include "Time.H"
#include "polyMesh.H"
#include "topoSetSource.H"
#include "globalMeshData.H"
#include "timeSelector.H"
#include "IOobjectList.H"
#include "cellZoneSet.H"
#include "faceZoneSet.H"
#include "pointZoneSet.H"
#include "IOdictionary.H"
using namespace Foam;
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
void printMesh(const Time& runTime, const polyMesh& mesh)
{
Info<< "Time:" << runTime.timeName()
<< " cells:" << mesh.globalData().nTotalCells()
<< " faces:" << mesh.globalData().nTotalFaces()
<< " points:" << mesh.globalData().nTotalPoints()
<< " patches:" << mesh.boundaryMesh().size()
<< " bb:" << mesh.bounds() << nl;
}
template<class ZoneType>
void removeZone
(
ZoneMesh<ZoneType, polyMesh>& zones,
const word& setName
)
{
label zoneID = zones.findZoneID(setName);
if (zoneID != -1)
{
Info<< "Removing zone " << setName << " at index " << zoneID << endl;
// Shuffle to last position
labelList oldToNew(zones.size());
label newI = 0;
forAll(oldToNew, i)
{
if (i != zoneID)
{
oldToNew[i] = newI++;
}
}
oldToNew[zoneID] = newI;
zones.reorder(oldToNew);
// Remove last element
zones.setSize(zones.size()-1);
zones.clearAddressing();
zones.write();
fileHandler().flush();
}
}
// Physically remove a set
void removeSet
(
const polyMesh& mesh,
const word& setType,
const word& setName
)
{
// Remove the file
IOobjectList objects
(
mesh,
mesh.time().findInstance
(
polyMesh::meshSubDir/"sets",
word::null,
IOobject::READ_IF_PRESENT,
mesh.facesInstance()
),
polyMesh::meshSubDir/"sets"
);
if (objects.found(setName))
{
// Remove file
fileName object = objects[setName]->objectPath();
Info<< "Removing file " << object << endl;
rm(object);
}
// See if zone
if (setType == cellZoneSet::typeName)
{
removeZone
(
const_cast<cellZoneMesh&>(mesh.cellZones()),
setName
);
}
else if (setType == faceZoneSet::typeName)
{
removeZone
(
const_cast<faceZoneMesh&>(mesh.faceZones()),
setName
);
}
else if (setType == pointZoneSet::typeName)
{
removeZone
(
const_cast<pointZoneMesh&>(mesh.pointZones()),
setName
);
}
}
polyMesh::readUpdateState meshReadUpdate(polyMesh& mesh)
{
polyMesh::readUpdateState stat = mesh.readUpdate();
switch(stat)
{
case polyMesh::UNCHANGED:
{
Info<< " mesh not changed." << endl;
break;
}
case polyMesh::POINTS_MOVED:
{
Info<< " points moved; topology unchanged." << endl;
break;
}
case polyMesh::TOPO_CHANGE:
{
Info<< " topology changed; patches unchanged." << nl
<< " ";
printMesh(mesh.time(), mesh);
break;
}
case polyMesh::TOPO_PATCH_CHANGE:
{
Info<< " topology changed and patches changed." << nl
<< " ";
printMesh(mesh.time(), mesh);
break;
}
default:
{
FatalErrorInFunction
<< "Illegal mesh update state "
<< stat << abort(FatalError);
break;
}
}
return stat;
}
int main(int argc, char *argv[])
{
timeSelector::addOptions(true, false);
#include "addDictOption.H"
#include "addRegionOption.H"
argList::addBoolOption
(
"noSync",
"do not synchronise selection across coupled patches"
);
#include "setRootCase.H"
#include "createTime.H"
instantList timeDirs = timeSelector::selectIfPresent(runTime, args);
#include "createNamedPolyMesh.H"
const bool noSync = args.optionFound("noSync");
const word dictName("topoSetDict");
#include "setSystemMeshDictionaryIO.H"
Info<< "Reading " << dictName << "\n" << endl;
IOdictionary topoSetDict(dictIO);
// Read set construct info from dictionary
PtrList<dictionary> actions(topoSetDict.lookup("actions"));
forAll(timeDirs, timeI)
{
runTime.setTime(timeDirs[timeI], timeI);
Info<< "Time = " << runTime.timeName() << endl;
// Optionally re-read mesh
meshReadUpdate(mesh);
// Execute all actions
forAll(actions, i)
{
const dictionary& dict = actions[i];
const word setName(dict.lookup("name"));
const word actionName(dict.lookup("action"));
const word setType(dict.lookup("type"));
topoSetSource::setAction action = topoSetSource::toAction
(
actionName
);
autoPtr<topoSet> currentSet;
if
(
(action == topoSetSource::NEW)
|| (action == topoSetSource::CLEAR)
)
{
currentSet = topoSet::New(setType, mesh, setName, 10000);
Info<< "Created " << currentSet().type() << " "
<< setName << endl;
}
else if (action == topoSetSource::REMOVE)
{
//?
}
else
{
currentSet = topoSet::New
(
setType,
mesh,
setName,
IOobject::MUST_READ
);
Info<< "Read set " << currentSet().type() << " "
<< setName << " with size "
<< returnReduce(currentSet().size(), sumOp<label>())
<< endl;
}
// Handle special actions (clear, invert) locally, rest through
// sources.
switch (action)
{
case topoSetSource::NEW:
case topoSetSource::ADD:
case topoSetSource::DELETE:
{
Info<< " Applying source " << word(dict.lookup("source"))
<< endl;
autoPtr<topoSetSource> source = topoSetSource::New
(
dict.lookup("source"),
mesh,
dict.subDict("sourceInfo")
);
source().applyToSet(action, currentSet());
// Synchronize for coupled patches.
if (!noSync) currentSet().sync(mesh);
currentSet().write();
fileHandler().flush();
}
break;
case topoSetSource::SUBSET:
{
Info<< " Applying source " << word(dict.lookup("source"))
<< endl;
autoPtr<topoSetSource> source = topoSetSource::New
(
dict.lookup("source"),
mesh,
dict.subDict("sourceInfo")
);
// Backup current set.
autoPtr<topoSet> oldSet
(
topoSet::New
(
setType,
mesh,
currentSet().name() + "_old2",
currentSet()
)
);
currentSet().clear();
source().applyToSet(topoSetSource::NEW, currentSet());
// Combine new value of currentSet with old one.
currentSet().subset(oldSet());
// Synchronize for coupled patches.
if (!noSync) currentSet().sync(mesh);
currentSet().write();
fileHandler().flush();
}
break;
case topoSetSource::CLEAR:
Info<< " Clearing " << currentSet().type() << endl;
currentSet().clear();
currentSet().write();
fileHandler().flush();
break;
case topoSetSource::INVERT:
Info<< " Inverting " << currentSet().type() << endl;
currentSet().invert(currentSet().maxSize(mesh));
currentSet().write();
fileHandler().flush();
break;
case topoSetSource::REMOVE:
Info<< " Removing set" << endl;
removeSet(mesh, setType, setName);
break;
default:
WarningInFunction
<< "Unhandled action " << action << endl;
break;
}
if (currentSet.valid())
{
Info<< " " << currentSet().type() << " "
<< currentSet().name()
<< " now size "
<< returnReduce(currentSet().size(), sumOp<label>())
<< endl;
}
}
}
Info<< "End\n" << endl;
return 0;
}
// ************************************************************************* //