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ThirdParty-6/README.html
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<title>OpenFOAM-dev Third-Party packages</title>
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<body>
<div id="content">
<h1 class="title">OpenFOAM-dev Third-Party packages</h1>
<div id="table-of-contents">
<h2>Table of Contents</h2>
<div id="text-table-of-contents">
<ul>
<li><a href="#sec-1">1. Description</a></li>
<li><a href="#sec-2">2. Order of execution:</a>
<ul>
<li><a href="#sec-2-1">2.1. Optional</a></li>
</ul>
</li>
<li><a href="#sec-3">3. Versions and locations to download the third party packages</a>
<ul>
<li><a href="#sec-3-1">3.1. Gcc C++ Compiler</a></li>
<li><a href="#sec-3-2">3.2. Parallel Processing</a>
<ul>
<li><a href="#sec-3-2-1">3.2.1. Scotch</a></li>
<li><a href="#sec-3-2-2">3.2.2. OpenMPI</a></li>
</ul>
</li>
<li><a href="#sec-3-3">3.3. ParaView</a></li>
<li><a href="#sec-3-4">3.4. CGAL</a></li>
<li><a href="#sec-3-5">3.5. Miscellaneous</a></li>
</ul>
</li>
<li><a href="#sec-4">4. Notes</a>
<ul>
<li><a href="#sec-4-1">4.1. Building ParaView-4.3.1/4.4.0/5.0.0/5.0.1</a></li>
<li><a href="#sec-4-2">4.2. Building ParaView-5.0.1 with gcc-6.1.0</a>
<ul>
<li><a href="#sec-4-2-1">4.2.1. Add support for gcc-6.?.?</a></li>
<li><a href="#sec-4-2-2">4.2.2. SciberQuestToolKit</a></li>
</ul>
</li>
<li><a href="#sec-4-3">4.3. Building ParaView-4.1.0</a></li>
</ul>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-1" class="outline-2">
<h2 id="sec-1"><span class="section-number-2">1</span> Description</h2>
<div class="outline-text-2" id="text-1">
<p>
Scripts for building third-party packages.
</p>
</div>
</div>
<div id="outline-container-sec-2" class="outline-2">
<h2 id="sec-2"><span class="section-number-2">2</span> Order of execution:</h2>
<div class="outline-text-2" id="text-2">
<ul class="org-ul">
<li>makeGcc (recommended if the system gcc is &lt; 4.7)
</li>
<li>Allwmake (Builds OpenMPI, Scotch etc.)
</li>
<li>makeCmake (if the system cmake version is &lt; 2.8.8)
</li>
<li>makeParaView
</li>
</ul>
</div>
<div id="outline-container-sec-2-1" class="outline-3">
<h3 id="sec-2-1"><span class="section-number-3">2.1</span> Optional</h3>
<div class="outline-text-3" id="text-2-1">
<ul class="org-ul">
<li>AllwmakeLibccmio (Only required for conversion of STAR-CCM+ meshes)
</li>
<li>Allclean (Only required to save disk space)
</li>
</ul>
</div>
</div>
</div>
<div id="outline-container-sec-3" class="outline-2">
<h2 id="sec-3"><span class="section-number-2">3</span> Versions and locations to download the third party packages</h2>
<div class="outline-text-2" id="text-3">
</div><div id="outline-container-sec-3-1" class="outline-3">
<h3 id="sec-3-1"><span class="section-number-3">3.1</span> Gcc C++ Compiler</h3>
<div class="outline-text-3" id="text-3-1">
<p>
The minimum version of gcc required is 4.5.0
</p>
<ul class="org-ul">
<li>gcc <a href="http://gcc.gnu.org/releases.html">http://gcc.gnu.org/releases.html</a>
</li>
<li>gmp <a href="http://gmplib.org/">http://gmplib.org/</a>
<a href="ftp://ftp.gnu.org/gnu/gmp/gmp-5.1.2.tar.bz2">ftp://ftp.gnu.org/gnu/gmp/gmp-5.1.2.tar.bz2</a>
</li>
<li>mpfr <a href="http://www.mpfr.org/">http://www.mpfr.org/</a>
<a href="ftp://ftp.gnu.org/gnu/mpfr/mpfr-3.1.2.tar.bz2">ftp://ftp.gnu.org/gnu/mpfr/mpfr-3.1.2.tar.bz2</a>
</li>
<li>mpc <a href="http://www.multiprecision.org/">http://www.multiprecision.org/</a>
<a href="http://www.multiprecision.org/mpc/download/mpc-1.0.1.tar.gz">http://www.multiprecision.org/mpc/download/mpc-1.0.1.tar.gz</a>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-3-2" class="outline-3">
<h3 id="sec-3-2"><span class="section-number-3">3.2</span> Parallel Processing</h3>
<div class="outline-text-3" id="text-3-2">
</div><div id="outline-container-sec-3-2-1" class="outline-4">
<h4 id="sec-3-2-1"><span class="section-number-4">3.2.1</span> Scotch</h4>
<div class="outline-text-4" id="text-3-2-1">
<p>
Scotch-6.0.3 is provided with ThirdParty-dev or the original source pack
may be obtained from:
</p>
<ul class="org-ul">
<li>Scotch/PtScotch: <a href="https://gforge.inria.fr/frs/download.php/file/34099/scotch_6.0.3.tar.gz">https://gforge.inria.fr/frs/download.php/file/34099/scotch_6.0.3.tar.gz</a>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-3-2-2" class="outline-4">
<h4 id="sec-3-2-2"><span class="section-number-4">3.2.2</span> OpenMPI</h4>
<div class="outline-text-4" id="text-3-2-2">
<ul class="org-ul">
<li>OpenMPI: <a href="http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.2.tar.bz2">http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.2.tar.bz2</a>
</li>
</ul>
</div>
</div>
</div>
<div id="outline-container-sec-3-3" class="outline-3">
<h3 id="sec-3-3"><span class="section-number-3">3.3</span> ParaView</h3>
<div class="outline-text-3" id="text-3-3">
<p>
ParaView-5.0.1 patched to compile and install correctly is provided with
ThirdParty-dev but older versions can be downloaded from <i>www.paraview.org</i>:
</p>
<ul class="org-ul">
<li>cmake <a href="http://www.cmake.org/files/v3.2/cmake-3.2.1.tar.gz">http://www.cmake.org/files/v3.2/cmake-3.2.1.tar.gz</a>
</li>
<li>ParaView-4.4.0 <a href="http://www.paraview.org/files/v4.4/ParaView-v4.4.0-source.tar.gz">http://www.paraview.org/files/v4.4/ParaView-v4.4.0-source.tar.gz</a>
</li>
<li>ParaView-5.0.1 <a href="http://www.paraview.org/files/v5.0/ParaView-v5.0.1-source.tar.gz">http://www.paraview.org/files/v5.0/ParaView-v5.0.1-source.tar.gz</a>
</li>
</ul>
<p>
but may need patching to compile (See <a href="#sec-4">4</a>).
</p>
</div>
</div>
<div id="outline-container-sec-3-4" class="outline-3">
<h3 id="sec-3-4"><span class="section-number-3">3.4</span> CGAL</h3>
<div class="outline-text-3" id="text-3-4">
<ul class="org-ul">
<li>CGAL <a href="https://github.com/CGAL/cgal/releases/download/releases/CGAL-4.8.1/CGAL-4.8.1.tar.xz">https://github.com/CGAL/cgal/releases/download/releases/CGAL-4.8.1/CGAL-4.8.1.tar.xz</a>
</li>
<li>boost <a href="http://sourceforge.net/projects/boost/files/boost/1.55.0/boost_1_55_0.tar.bz2/download">http://sourceforge.net/projects/boost/files/boost/1.55.0/boost_1_55_0.tar.bz2/download</a>
</li>
</ul>
</div>
</div>
<div id="outline-container-sec-3-5" class="outline-3">
<h3 id="sec-3-5"><span class="section-number-3">3.5</span> Miscellaneous</h3>
<div class="outline-text-3" id="text-3-5">
<ul class="org-ul">
<li>libccmio <a href="http://portal.nersc.gov/svn/visit/trunk/third_party/libccmio-2.6.1.tar.gz">http://portal.nersc.gov/svn/visit/trunk/third_party/libccmio-2.6.1.tar.gz</a>
</li>
</ul>
</div>
</div>
</div>
<div id="outline-container-sec-4" class="outline-2">
<h2 id="sec-4"><span class="section-number-2">4</span> Notes</h2>
<div class="outline-text-2" id="text-4">
</div><div id="outline-container-sec-4-1" class="outline-3">
<h3 id="sec-4-1"><span class="section-number-3">4.1</span> Building ParaView-4.3.1/4.4.0/5.0.0/5.0.1</h3>
<div class="outline-text-3" id="text-4-1">
<p>
The ParaView-4.3.1/4.4.0/5.0.0 source-pack provided by KitWare will not
build and install correctly without a minor correction: lines 653-656
(650-653 in ParaView-5.0.0, 659-662 in ParaView-5.0.1) must be removed or
commented from file
<i>ThirdParty-dev/ParaView-[45].?.?/Qt/Components/CMakeLists.txt</i> after
unpacking and renaming the ParaView-[45].?.? directory. This is because the
file ui_pqExportStateWizard.h referred to in
</p>
<div class="org-src-container">
<pre class="src src-C"><span style="color: #0000cd; font-weight: bold;">if</span>(PARAVIEW_INSTALL_DEVELOPMENT_FILES)
install(FILES <span style="color: #008b00;">"${CMAKE_CURRENT_BINARY_DIR}/ui_pqExportStateWizard.h"</span>
DESTINATION <span style="color: #008b00;">"${VTK_INSTALL_INCLUDE_DIR}"</span>)
endif()
</pre>
</div>
<p>
does not exist and cannot be installed causing the build and installation to
fail.
</p>
<p>
Additionally for ParaView-4.4.0 there is a bug in the STL reader which can
be patched by running the following command from within the ThirdParty-???
directory:
</p>
<ul class="org-ul">
<li>wget <a href="https://raw.githubusercontent.com/Kitware/VTK/40937e934308e5009e80769dc0c451ee4f157749/IO/Geometry/vtkSTLReader.cxx">https://raw.githubusercontent.com/Kitware/VTK/40937e934308e5009e80769dc0c451ee4f157749/IO/Geometry/vtkSTLReader.cxx</a> -O ParaView-4.4.0/VTK/IO/Geometry/vtkSTLReader.cxx
</li>
</ul>
<p>
See also <a href="http://www.openfoam.org/mantisbt/view.php?id=1887">http://www.openfoam.org/mantisbt/view.php?id=1887</a>
</p>
</div>
</div>
<div id="outline-container-sec-4-2" class="outline-3">
<h3 id="sec-4-2"><span class="section-number-3">4.2</span> Building ParaView-5.0.1 with gcc-6.1.0</h3>
<div class="outline-text-3" id="text-4-2">
</div><div id="outline-container-sec-4-2-1" class="outline-4">
<h4 id="sec-4-2-1"><span class="section-number-4">4.2.1</span> Add support for gcc-6.?.?</h4>
<div class="outline-text-4" id="text-4-2-1">
<p>
The following cmake files
</p>
<ul class="org-ul">
<li>ParaView-5.0.1/VTK/CMake/vtkCompilerExtras.cmake
</li>
<li>ParaView-5.0.1/VTK/CMake/GenerateExportHeader.cmake
</li>
</ul>
<p>
specifically limit the gcc versions supported. To add support gcc-6.?.?
replace '[345]' with '[3456]'
</p>
</div>
</div>
<div id="outline-container-sec-4-2-2" class="outline-4">
<h4 id="sec-4-2-2"><span class="section-number-4">4.2.2</span> SciberQuestToolKit</h4>
<div class="outline-text-4" id="text-4-2-2">
<p>
The SciberQuestToolKit plugin fails to compile with gcc-6.1.0 and causes
the compilation of ParaView to halt. The easiest solution is to delete
the ParaView-5.0.1/Plugins/SciberQuestToolKit directory.
</p>
</div>
</div>
</div>
<div id="outline-container-sec-4-3" class="outline-3">
<h3 id="sec-4-3"><span class="section-number-3">4.3</span> Building ParaView-4.1.0</h3>
<div class="outline-text-3" id="text-4-3">
<p>
On Ubuntu 14.10 and higher, OpenSuSE 13.2 and probably other recent
GNU/Linux distributions there is an issue in the GL libraries requiring a
change to the vtkXOpenGLRenderWindow.cxx file in ParaView: Uncomment line 30
</p>
<p>
#define GLX_GLXEXT_LEGACY
</p>
</div>
</div>
</div>
</div>
<div id="postamble" class="status">
<p class="date">Date: 31th May 2016</p>
<p class="date">Created: 2016-07-01 Fri 16:00</p>
<p class="creator"><a href="http://www.gnu.org/software/emacs/">Emacs</a> 24.5 (<a href="http://orgmode.org">Org</a> mode 8.2.10)</p>
<p class="validation"><a href="http://validator.w3.org/check?uri=referer">Validate</a></p>
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