diff --git a/BUILD.md b/BUILD.md index fbda622..0e956d8 100644 --- a/BUILD.md +++ b/BUILD.md @@ -516,7 +516,7 @@ easier to use `grep` and find the relevant pages and links. -[page adios]: https://csmd.ornl.gov/adios2 +[page adios]: https://csmd.ornl.gov/software/adios2 [repo adios]: https://github.com/ornladios/ADIOS2 [link adios]: https://github.com/ornladios/ADIOS2/archive/v2.4.0.tar.gz diff --git a/makeAdios1 b/makeAdios1 deleted file mode 100755 index 5fd1113..0000000 --- a/makeAdios1 +++ /dev/null @@ -1,365 +0,0 @@ -#!/bin/sh -#------------------------------------------------------------------------------ -# ========= | -# \\ / F ield | OpenFOAM: The Open Source CFD Toolbox -# \\ / O peration | -# \\ / A nd | www.openfoam.com -# \\/ M anipulation | -#------------------------------------------------------------------------------ -# Copyright (C) 2016-2019 OpenCFD Ltd. -#------------------------------------------------------------------------------ -# License -# This file is part of OpenFOAM, licensed under GNU General Public License -# . -# -# Script -# makeAdios1 -# -# Description -# Build script for ADIOS1 -# -# ---------------------------------------------- -# NO USER-CONFIGURABLE SETTINGS WITHIN THIS FILE -#------------------------------------------------------------------------------ -# Run from third-party directory only -cd "${0%/*}" || exit -wmakeCheckPwd "$WM_THIRD_PARTY_DIR" 2>/dev/null || { - echo "Error (${0##*/}) : not located in \$WM_THIRD_PARTY_DIR" - echo " Check your OpenFOAM environment and installation" - exit 1 -} -. etc/tools/ThirdPartyFunctions -#------------------------------------------------------------------------------ - -# ADIOS version from OpenFOAM etc/config.sh file: -_foamConfig adios1 - -adiosPACKAGE=${adios1_version:-adios-none} - -#------------------------------------------------------------------------------ -usage() { - exec 1>&2 - while [ "$#" -ge 1 ]; do echo "$1"; shift; done - cat< libadios_$FOAM_MPI - # - libadios_nompi -> libadios_dummy - # - echo "Adjust library names for ADIOS" - for i in \ - $ADIOS1_ARCH_PATH/etc/adios_config.flags \ - ; - do - [ -f "$i" ] || { - echo " no such file - '$i'" - continue - } - - if sed -i \ - -e '/_FLIB=/d' \ - -e '/_V1_INC=/d' \ - -e 's| *| |g' \ - -e 's|\(-ladios[a-z]*_\)nompi |\1dummy |g' \ - $i - then - echo " '$i'" - else - echo " problems with '$i'" - fi - - if [ "$FOAM_MPI" != dummy ] - then - sed -i -e 's|\(-ladios[a-z]*\) |\1_'"$FOAM_MPI |g" $i || \ - echo " problems with '$i'" - fi - done -} - -# -# List ADIOS methods/configuration -# -listMethods() -{ - [ -f $ADIOS1_ARCH_PATH/bin/adios_config ] || { - echo "Warning: no adios_config" - return 1 - } - - echo "===============" - - # May have problems listing parallel methods (eg, transport key missing) - if $ADIOS1_ARCH_PATH/bin/adios_config -m >/dev/null 2>&1 - then - $ADIOS1_ARCH_PATH/bin/adios_config -m 2>/dev/null - else - echo "Warning: could not list parallel methods" - # Fallback to serial methods - $ADIOS1_ARCH_PATH/bin/adios_config -s -m 2>/dev/null - fi || echo "Warning: could not list configured methods" - echo "===============" - -} - - -# Needs future adjustment -# - for shared library -# - for mpi-specific library locations -if [ -f $ADIOS1_ARCH_PATH/include/adios.h \ - -a -r $ADIOS1_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH/libadios_${FOAM_MPI}.a ] -then - echo " ADIOS header in $ADIOS1_ARCH_PATH/include" - ### echo " ADIOS libs in $FOAM_EXT_LIBBIN" # dynamic - echo " ADIOS libs in $ADIOS1_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH" # static - listMethods -elif [ -z "$CMAKE_PATH" ] -then - echo "Starting build: $adiosPACKAGE (using configure)" - echo - ( - # Configuration options: - unset configOpt - - # Add InfiniBand support - ibDir=/usr/local/ofed - if [ -d "$ibDir" -a "$FOAM_MPI" != dummy ] - then - configOpt="$configOpt --with-infiniband=$ibDir" - fi - - # Transport layers - if [ -f /usr/include/bzlib.h ] - then - configOpt="$configOpt --with-bzip2" - fi - - if [ -f /usr/include/zlib.h ] - then - configOpt="$configOpt --with-zlib" - fi - - # Other types of support - ## configOpt="$configOpt --with-hdf5=..." - ## configOpt="$configOpt --with-lustre=..." - ## configOpt="$configOpt --enable-research-transports" - - # Additional configure options - if [ "$1" = "--" ] - then - shift - configOpt="$configOpt $@" - fi - - # End of configuration options - # ---------------------------- - buildDIR=$buildBASE/$adiosPACKAGE - - cd "$ADIOS1_SOURCE_DIR" || exit - export GIT_DIR="$PWD/.git" # Mask seeing our own git-repo - - [ -e Makefile ] && make distclean 2>/dev/null - - applyPatch $adiosPACKAGE $ADIOS1_SOURCE_DIR - - # Remove any existing build folder and recreate - rm -rf $ADIOS1_ARCH_DIR - rm -rf $buildDIR 2>/dev/null - mkdir -p $buildDIR - - [ -f configure ] || { - echo "no configure for $adiosPACKAGE ... trying autogen" - ./autogen.sh - } - - # May not work properly with FOAM_MPI = dummy - if [ "$FOAM_MPI" = dummy ] - then - configOpt="$configOpt --without-mpi" - else - CC=mpicc - CXX=mpicxx - fi - - # Install into lib64/ - cd $buildDIR && $ADIOS1_SOURCE_DIR/configure \ - --prefix=$ADIOS1_ARCH_PATH \ - --libdir=$ADIOS1_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH \ - --disable-fortran \ - --with-pic \ - --without-fastbit \ - $configOpt \ - && make -j $WM_NCOMPPROCS all \ - && make install \ - && echo "Built: $adiosPACKAGE" \ - && adjustADIOS \ - && listMethods - ) || { - echo "Error building: $adiosPACKAGE" - } -else - # CMake options often lag the configure ones - echo "Starting build: $adiosPACKAGE (using cmake)" - echo - ( - buildDIR=$buildBASE/$adiosPACKAGE - cd "$ADIOS1_SOURCE_DIR" || exit - export GIT_DIR="$PWD/.git" # Mask seeing our own git-repo - - applyPatch $adiosPACKAGE $ADIOS1_SOURCE_DIR - - # Remove any existing build folder and recreate - rm -rf $ADIOS1_ARCH_DIR - rm -rf $buildDIR 2>/dev/null - mkdir -p $buildDIR - - # May not work properly with FOAM_MPI = dummy - if [ "$FOAM_MPI" = dummy ] - then - configOpt="$configOpt --without-mpi" - else - CC=mpicc - CXX=mpicxx - fi - - cmake=$(findCMake) - - # Install into lib64/ - cd $buildDIR && $cmake \ - -DCMAKE_INSTALL_PREFIX=$ADIOS1_ARCH_PATH \ - -DCMAKE_BUILD_TYPE=Release \ - -DBUILD_FORTRAN=FALSE \ - ${WM_QUIET:+-DCMAKE_RULE_MESSAGES=OFF} \ - $ADIOS1_SOURCE_DIR \ - && make -j $WM_NCOMPPROCS all \ - && make install \ - && echo "Built: $adiosPACKAGE" \ - && adjustADIOS \ - && listMethods - ) || { - echo "Error building: $adiosPACKAGE" - exit 1 - } -fi - -# ----------------------------------------------------------------------------- diff --git a/makeAdios2 b/makeAdios2 index 7bb6e1f..f393ced 100755 --- a/makeAdios2 +++ b/makeAdios2 @@ -5,11 +5,10 @@ # \\ / A nd | www.openfoam.com # \\/ M anipulation | #------------------------------------------------------------------------------ -# Copyright (C) 2018-2019 OpenCFD Ltd. +# Copyright (C) 2018-2020 OpenCFD Ltd. #------------------------------------------------------------------------------ # License -# This file is part of OpenFOAM, licensed under GNU General Public License -# . +# This file is part of OpenFOAM, distributed under GPL-3.0-or-later. # # Script # makeAdios2 @@ -165,6 +164,7 @@ else -DCMAKE_INSTALL_PREFIX=$ADIOS2_ARCH_PATH \ -DCMAKE_BUILD_TYPE=Release \ -DADIOS2_USE_Fortran=FALSE \ + -DADIOS2_BUILD_EXAMPLES=FALSE \ ${WM_QUIET:+-DCMAKE_RULE_MESSAGES=OFF} \ $ADIOS2_SOURCE_DIR \ && make -j $WM_NCOMPPROCS all \