TUT: mesh: clean up tutorials

This commit is contained in:
Kutalmis Bercin
2021-06-04 10:19:30 +01:00
committed by Andrew Heather
parent 6120e13d29
commit 3a858ac682
413 changed files with 623 additions and 1608672 deletions

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@ -5,18 +5,6 @@ cd "${0%/*}" || exit # Run from this directory
cleanCase0
rm -rf constant/triSurface/blob.stl.gz
rm -rf constant/cellAlignments
rm -rf constant/targetCellSize
rm -rf constant/internalDelaunayVertices
(
cd constant/backgroundMeshDecomposition/polyMesh 2>/dev/null || exit
rm -f boundary faces neighbour owner points
)
rm -rf snapToSurface?.obj
rm -rf tetsToSnapTo.obj
rm -rf constant/
#------------------------------------------------------------------------------

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@ -3,8 +3,11 @@ cd "${0%/*}" || exit # Run from this directory
. ${WM_PROJECT_DIR:?}/bin/tools/RunFunctions # Tutorial run functions
#------------------------------------------------------------------------------
# copy flange surface from resources directory
cp $FOAM_TUTORIALS/resources/geometry/blob.stl.gz constant/triSurface/
mkdir -p constant/triSurface/
cp -f \
"$FOAM_TUTORIALS"/resources/geometry/blob.stl.gz \
constant/triSurface
runApplication foamyHexMesh
@ -16,5 +19,4 @@ runApplication -s collapseFaceSet \
runApplication checkMesh -latestTime -allGeometry -allTopology
#------------------------------------------------------------------------------

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@ -3,8 +3,11 @@ cd "${0%/*}" || exit # Run from this directory
. ${WM_PROJECT_DIR:?}/bin/tools/RunFunctions # Tutorial run functions
#------------------------------------------------------------------------------
# copy flange surface from resources directory
cp $FOAM_TUTORIALS/resources/geometry/blob.stl.gz constant/triSurface/
mkdir -p constant/triSurface/
cp -f \
"$FOAM_TUTORIALS"/resources/geometry/blob.stl.gz \
constant/triSurface
runApplication blockMesh -region backgroundMeshDecomposition
runApplication decomposePar -region backgroundMeshDecomposition
@ -21,5 +24,4 @@ runParallel checkMesh -latestTime -allTopology -allGeometry
runApplication reconstructParMesh -latestTime
#------------------------------------------------------------------------------

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@ -1,4 +0,0 @@
Directory to house tri-surfaces
The Allrun script copies the surface from the $FOAM_TUTORIALS/resources/geometry
directory

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@ -66,4 +66,5 @@ mergePatchPairs
(
);
// ************************************************************************* //

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@ -17,16 +17,6 @@ FoamFile
numberOfSubdomains 2;
method scotch;
//method ptscotch;
// method hierarchical;
coeffs
{
n (2 1 1);
}
distributed no;
roots ( );
// ************************************************************************* //

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@ -10,7 +10,6 @@ FoamFile
version 2.0;
format ascii;
class dictionary;
location "system";
object fvSolution;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -19,4 +18,5 @@ solvers
{
}
// ************************************************************************* //

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@ -5,7 +5,6 @@
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
@ -13,7 +12,6 @@ FoamFile
class dictionary;
object controlDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
startFrom startTime;
@ -44,4 +42,5 @@ timePrecision 6;
runTimeModifiable yes;
// ************************************************************************* //

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@ -17,12 +17,6 @@ FoamFile
numberOfSubdomains 2;
method scotch;
//method ptscotch;
// method hierarchical;
coeffs
{
n (2 1 1);
}
// ************************************************************************* //

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@ -10,7 +10,6 @@ FoamFile
version 2.0;
format ascii;
class dictionary;
location "system";
object fvSchemes;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -45,4 +44,5 @@ snGradSchemes
default none;
}
// ************************************************************************* //

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@ -10,7 +10,6 @@ FoamFile
version 2.0;
format ascii;
class dictionary;
location "system";
object fvSolution;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -19,4 +18,5 @@ solvers
{
}
// ************************************************************************* //

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@ -1,302 +0,0 @@
/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v2012 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object snappyHexMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Which of the steps to run
castellatedMesh false;
snap false;
addLayers true;
// Geometry. Definition of all surfaces. All surfaces are of class
// searchableSurface.
// Surfaces are used
// - to specify refinement for any mesh cell intersecting it
// - to specify refinement for any mesh cell inside/outside/near
// - to 'snap' the mesh boundary to the surface
geometry
{
// motorBike.obj
// {
// type triSurfaceMesh;
// name motorBike;
// }
//
// refinementBox
// {
// type box;
// min (-1.0 -0.7 0.0);
// max ( 8.0 0.7 2.5);
// }
}
// Settings for the castellatedMesh generation.
castellatedMeshControls
{
// Refinement parameters
// ~~~~~~~~~~~~~~~~~~~~~
// If local number of cells is >= maxLocalCells on any processor
// switches from from refinement followed by balancing
// (current method) to (weighted) balancing before refinement.
maxLocalCells 100000;
// Overall cell limit (approximately). Refinement will stop immediately
// upon reaching this number so a refinement level might not complete.
// Note that this is the number of cells before removing the part which
// is not 'visible' from the keepPoint. The final number of cells might
// actually be a lot less.
maxGlobalCells 2000000;
// The surface refinement loop might spend lots of iterations refining just a
// few cells. This setting will cause refinement to stop if <= minimumRefine
// are selected for refinement. Note: it will at least do one iteration
// (unless the number of cells to refine is 0)
minRefinementCells 10;
// Allow a certain level of imbalance during refining
// (since balancing is quite expensive)
// Expressed as fraction of perfect balance (= overall number of cells /
// nProcs). 0=balance always.
maxLoadUnbalance 0.10;
// Number of buffer layers between different levels.
// 1 means normal 2:1 refinement restriction, larger means slower
// refinement.
nCellsBetweenLevels 3;
// Explicit feature edge refinement
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
// Specifies a level for any cell intersected by its edges.
// This is a featureEdgeMesh, read from constant/triSurface for now.
features
(
//{
// file "someLine.eMesh";
// level 2;
//}
);
// Surface based refinement
// ~~~~~~~~~~~~~~~~~~~~~~~~
// Specifies two levels for every surface. The first is the minimum level,
// every cell intersecting a surface gets refined up to the minimum level.
// The second level is the maximum level. Cells that 'see' multiple
// intersections where the intersections make an
// angle > resolveFeatureAngle get refined up to the maximum level.
refinementSurfaces
{
// motorBike
// {
// // Surface-wise min and max refinement level
// level (5 6);
//
// // Optional specification of patch type (default is wall). No
// // constraint types (cyclic, symmetry) etc. are allowed.
// patchInfo
// {
// type wall;
// inGroups (motorBike);
// }
// }
}
// Resolve sharp angles
resolveFeatureAngle 30;
// Region-wise refinement
// ~~~~~~~~~~~~~~~~~~~~~~
// Specifies refinement level for cells in relation to a surface. One of
// three modes
// - distance. 'levels' specifies per distance to the surface the
// wanted refinement level. The distances need to be specified in
// descending order.
// - inside. 'levels' is only one entry and only the level is used. All
// cells inside the surface get refined up to the level. The surface
// needs to be closed for this to be possible.
// - outside. Same but cells outside.
refinementRegions
{
// refinementBox
// {
// mode inside;
// levels ((1E15 4));
// }
}
// Mesh selection
// ~~~~~~~~~~~~~~
// After refinement patches get added for all refinementSurfaces and
// all cells intersecting the surfaces get put into these patches. The
// section reachable from the locationInMesh is kept.
// NOTE: This point should never be on a face, always inside a cell, even
// after refinement.
locationInMesh (-1 0 0);
// Whether any faceZones (as specified in the refinementSurfaces)
// are only on the boundary of corresponding cellZones or also allow
// free-standing zone faces. Not used if there are no faceZones.
allowFreeStandingZoneFaces true;
}
// Settings for the snapping.
snapControls
{
//- Number of patch smoothing iterations before finding correspondence
// to surface
nSmoothPatch 3;
//- Relative distance for points to be attracted by surface feature point
// or edge. True distance is this factor times local
// maximum edge length.
tolerance 4.0;
//- Number of mesh displacement relaxation iterations.
nSolveIter 0;
//- Maximum number of snapping relaxation iterations. Should stop
// before upon reaching a correct mesh.
nRelaxIter 5;
//- Highly experimental and wip: number of feature edge snapping
// iterations. Leave out altogether to disable.
// Do not use here since mesh resolution too low and baffles present
//nFeatureSnapIter 10;
}
// Settings for the layer addition.
addLayersControls
{
// Are the thickness parameters below relative to the undistorted
// size of the refined cell outside layer (true) or absolute sizes (false).
relativeSizes false;
// Per final patch (so not geometry!) the layer information
layers
{
blob.stl_patch1
{
nSurfaceLayers 4;
}
}
// Expansion factor for layer mesh
expansionRatio 1.5;
// Wanted thickness of final added cell layer. If multiple layers
// is the thickness of the layer furthest away from the wall.
// Relative to undistorted size of cell outside layer.
// See relativeSizes parameter.
finalLayerThickness 0.02;
// Minimum thickness of cell layer. If for any reason layer
// cannot be above minThickness do not add layer.
// Relative to undistorted size of cell outside layer.
minThickness 0.005;
// If points get not extruded do nGrow layers of connected faces that are
// also not grown. This helps convergence of the layer addition process
// close to features.
// Note: changed(corrected) w.r.t 1.7.x! (didn't do anything in 1.7.x)
nGrow 0;
// Advanced settings
// When not to extrude surface. 0 is flat surface, 90 is when two faces
// are perpendicular
featureAngle 90;
// Maximum number of snapping relaxation iterations. Should stop
// before upon reaching a correct mesh.
nRelaxIter 3;
// Number of smoothing iterations of surface normals
nSmoothSurfaceNormals 1;
// Number of smoothing iterations of interior mesh movement direction
nSmoothNormals 3;
// Smooth layer thickness over surface patches
nSmoothThickness 10;
// Stop layer growth on highly warped cells
maxFaceThicknessRatio 1000;
// Reduce layer growth where ratio thickness to medial
// distance is large
maxThicknessToMedialRatio 0.3;
// Angle used to pick up medial axis points
// Note: changed(corrected) w.r.t 1.7.x! 90 degrees corresponds to 130
// in 1.7.x.
minMedialAxisAngle 90;
// Create buffer region for new layer terminations
nBufferCellsNoExtrude 0;
// Overall max number of layer addition iterations. The mesher will exit
// if it reaches this number of iterations; possibly with an illegal
// mesh.
nLayerIter 50;
}
// Generic mesh quality settings. At any undoable phase these determine
// where to undo.
meshQualityControls
{
#include "meshQualityDict"
// Advanced
//- Number of error distribution iterations
nSmoothScale 4;
//- Amount to scale back displacement at error points
errorReduction 0.75;
}
// Advanced
// Merge tolerance. Is fraction of overall bounding box of initial mesh.
// Note: the write tolerance needs to be higher than this.
mergeTolerance 1e-6;
// ************************************************************************* //

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@ -12,7 +12,6 @@ FoamFile
class dictionary;
object topoSetDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
actions
@ -119,4 +118,5 @@ actions
}
);
// ************************************************************************* //