TUT: mesh: clean up tutorials

tutorials/mesh/foamyHexMesh/mixerVessel/Allrun.pre

@@ -0,0 +1,86 @@
+#!/bin/sh
+cd "${0%/*}" || exit                                # Run from this directory
+. ${WM_PROJECT_DIR:?}/bin/tools/RunFunctions        # Tutorial run functions
+#------------------------------------------------------------------------------
+
+intersectSurfaces()
+{
+    outputName1=$(basename $1)
+    outputName1=${outputName1%.*}
+
+    outputName2=$(basename $2)
+    outputName2=${outputName2%.*}
+
+    runApplication -s $outputName1:$outputName2 \
+        surfaceBooleanFeatures intersection "$@"
+}
+
+
+#------------------------------------------------------------------------------
+
+cp -rf \
+    "$FOAM_TUTORIALS"/resources/geometry/mixerVessel \
+    constant/triSurface/rawSurfaces
+
+rm -rf 0
+
+# Run the surface preparation script
+./constant/triSurface/surfaceProcess.sh > log.surfaceProcess 2>&1
+
+# Surface intersections
+intersectSurfaces vessel.stl spargerShaft.stl -perturb
+
+intersectSurfaces vessel.stl shaft.stl -perturb
+
+intersectSurfaces spargerShaft.stl spargerInlet.stl -perturb
+
+intersectSurfaces stirrer.stl shaftRotating.stl -perturb
+
+intersectSurfaces stirrer_baffles.stl stirrer.stl -surf1Baffle -perturb
+
+intersectSurfaces rotating.stl shaft.stl -surf1Baffle -perturb
+
+# Intersect blades with the plate
+for bladeI in $(seq 1 6)
+do
+    intersectSurfaces \
+        stirrer_baffles_"$bladeI".obj \
+        stirrer_baffles_plate.obj   \
+       -surf1Baffle -surf2Baffle
+done
+
+# Meshing
+cp -f system/controlDict.mesh system/controlDict
+
+runApplication blockMesh -region backgroundMeshDecomposition
+
+runApplication -s backgroundMeshDecomposition \
+    decomposePar -region backgroundMeshDecomposition
+
+runApplication surfaceFeatureExtract
+
+runParallel foamyHexMesh
+
+runParallel -s faces \
+    collapseEdges -collapseFaces -latestTime \
+                  -dict system/collapseDict.collapseFaces
+
+#runParallel -s faceSet  \
+#    collapseEdges -collapseFaceSet indirectPatchFaces -latestTime \
+#                  -dict system/collapseDict.indirectPatchFaces
+
+runParallel checkMesh -allTopology -allGeometry -latestTime
+
+# Copy the mesh from the latest time folder into polyMesh and delete that
+# latest time folder
+latestTime=$(foamListTimes -latestTime -processor)
+if [ "$latestTime" != "constant" ] && [ -d processor0/"$latestTime"/polyMesh ]
+then
+    runApplication reconstructParMesh -latestTime
+
+    cp -rf "$latestTime"/polyMesh constant
+    rm -rf "$latestTime"
+fi
+
+
+#------------------------------------------------------------------------------