Standardized cell, patch and face loop index names

This commit is contained in:
Henry Weller
2016-04-25 10:28:32 +01:00
parent 2d5ff31649
commit 43beb06018
849 changed files with 13266 additions and 13266 deletions

View File

@ -47,22 +47,22 @@ License
void Foam::meshRefinement::markBoundaryFace
(
const label faceI,
const label facei,
boolList& isBoundaryFace,
boolList& isBoundaryEdge,
boolList& isBoundaryPoint
) const
{
isBoundaryFace[faceI] = true;
isBoundaryFace[facei] = true;
const labelList& fEdges = mesh_.faceEdges(faceI);
const labelList& fEdges = mesh_.faceEdges(facei);
forAll(fEdges, fp)
{
isBoundaryEdge[fEdges[fp]] = true;
}
const face& f = mesh_.faces()[faceI];
const face& f = mesh_.faces()[facei];
forAll(f, fp)
{
@ -241,9 +241,9 @@ Foam::Map<Foam::label> Foam::meshRefinement::findEdgeConnectedProblemCells
forAll(candidateFaces, i)
{
label faceI = candidateFaces[i];
label facei = candidateFaces[i];
vector n = mesh_.faceAreas()[faceI];
vector n = mesh_.faceAreas()[facei];
n /= mag(n);
label region = surfaces_.globalRegion
@ -258,10 +258,10 @@ Foam::Map<Foam::label> Foam::meshRefinement::findEdgeConnectedProblemCells
{
if (mag(n & nearestNormal[i]) < Foam::sin(angle))
{
perpFaces.insert(faceI);
perpFaces.insert(facei);
candidateCells.insert
(
mesh_.faceOwner()[faceI],
mesh_.faceOwner()[facei],
globalToPatch[region]
);
}
@ -289,14 +289,14 @@ bool Foam::meshRefinement::isCollapsedFace
const pointField& neiCc,
const scalar minFaceArea,
const scalar maxNonOrtho,
const label faceI
const label facei
) const
{
// Severe nonorthogonality threshold
const scalar severeNonorthogonalityThreshold =
::cos(degToRad(maxNonOrtho));
vector s = mesh_.faces()[faceI].normal(points);
vector s = mesh_.faces()[facei].normal(points);
scalar magS = mag(s);
// Check face area
@ -306,11 +306,11 @@ bool Foam::meshRefinement::isCollapsedFace
}
// Check orthogonality
const point& ownCc = mesh_.cellCentres()[mesh_.faceOwner()[faceI]];
const point& ownCc = mesh_.cellCentres()[mesh_.faceOwner()[facei]];
if (mesh_.isInternalFace(faceI))
if (mesh_.isInternalFace(facei))
{
label nei = mesh_.faceNeighbour()[faceI];
label nei = mesh_.faceNeighbour()[facei];
vector d = mesh_.cellCentres()[nei] - ownCc;
scalar dDotS = (d & s)/(mag(d)*magS + VSMALL);
@ -326,11 +326,11 @@ bool Foam::meshRefinement::isCollapsedFace
}
else
{
label patchI = mesh_.boundaryMesh().whichPatch(faceI);
label patchi = mesh_.boundaryMesh().whichPatch(facei);
if (mesh_.boundaryMesh()[patchI].coupled())
if (mesh_.boundaryMesh()[patchi].coupled())
{
vector d = neiCc[faceI-mesh_.nInternalFaces()] - ownCc;
vector d = neiCc[facei-mesh_.nInternalFaces()] - ownCc;
scalar dDotS = (d & s)/(mag(d)*magS + VSMALL);
@ -358,12 +358,12 @@ bool Foam::meshRefinement::isCollapsedCell
(
const pointField& points,
const scalar volFraction,
const label cellI
const label celli
) const
{
scalar vol = mesh_.cells()[cellI].mag(points, mesh_.faces());
scalar vol = mesh_.cells()[celli].mag(points, mesh_.faces());
if (vol/mesh_.cellVolumes()[cellI] < volFraction)
if (vol/mesh_.cellVolumes()[celli] < volFraction)
{
return true;
}
@ -406,13 +406,13 @@ Foam::labelList Foam::meshRefinement::nearestPatch
nFaces = 0;
forAll(adaptPatchIDs, i)
{
label patchI = adaptPatchIDs[i];
const polyPatch& pp = patches[patchI];
label patchi = adaptPatchIDs[i];
const polyPatch& pp = patches[patchi];
forAll(pp, i)
{
patchFaces[nFaces] = pp.start()+i;
patchData[nFaces] = topoDistanceData(patchI, 0);
patchData[nFaces] = topoDistanceData(patchi, 0);
nFaces++;
}
}
@ -431,15 +431,15 @@ Foam::labelList Foam::meshRefinement::nearestPatch
// And extract
bool haveWarned = false;
forAll(faceData, faceI)
forAll(faceData, facei)
{
if (!faceData[faceI].valid(deltaCalc.data()))
if (!faceData[facei].valid(deltaCalc.data()))
{
if (!haveWarned)
{
WarningInFunction
<< "Did not visit some faces, e.g. face " << faceI
<< " at " << mesh_.faceCentres()[faceI] << endl
<< "Did not visit some faces, e.g. face " << facei
<< " at " << mesh_.faceCentres()[facei] << endl
<< "Assigning these cells to patch "
<< adaptPatchIDs[0]
<< endl;
@ -448,7 +448,7 @@ Foam::labelList Foam::meshRefinement::nearestPatch
}
else
{
nearestAdaptPatch[faceI] = faceData[faceI].data();
nearestAdaptPatch[facei] = faceData[facei].data();
}
}
}
@ -495,19 +495,19 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
{
const polyPatch& pp = patches[adaptPatchIDs[i]];
label faceI = pp.start();
label facei = pp.start();
forAll(pp, j)
{
markBoundaryFace
(
faceI,
facei,
isBoundaryFace,
isBoundaryEdge,
isBoundaryPoint
);
faceI++;
facei++;
}
}
@ -557,17 +557,17 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
forAll(cFaces, i)
{
label faceI = cFaces[i];
label facei = cFaces[i];
if (facePatch[faceI] == -1 && mesh_.isInternalFace(faceI))
if (facePatch[facei] == -1 && mesh_.isInternalFace(facei))
{
facePatch[faceI] = nearestAdaptPatch[faceI];
facePatch[facei] = nearestAdaptPatch[facei];
nBaffleFaces++;
// Mark face as a 'boundary'
markBoundaryFace
(
faceI,
facei,
isBoundaryFace,
isBoundaryEdge,
isBoundaryPoint
@ -719,9 +719,9 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
DynamicList<label> dynFEdges;
DynamicList<label> dynCPoints;
forAll(cellLevel, cellI)
forAll(cellLevel, celli)
{
const labelList& cPoints = mesh_.cellPoints(cellI, dynCPoints);
const labelList& cPoints = mesh_.cellPoints(celli, dynCPoints);
// Get number of anchor points (pointLevel <= cellLevel)
@ -733,7 +733,7 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
{
label pointI = cPoints[i];
if (pointLevel[pointI] <= cellLevel[cellI])
if (pointLevel[pointI] <= cellLevel[celli])
{
// Anchor point
if (isBoundaryPoint[pointI])
@ -754,7 +754,7 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
if (nBoundaryAnchors == 8)
{
const cell& cFaces = mesh_.cells()[cellI];
const cell& cFaces = mesh_.cells()[celli];
// Count boundary faces.
label nBfaces = 0;
@ -777,16 +777,16 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
if
(
checkCollapse
&& !isCollapsedCell(newPoints, volFraction, cellI)
&& !isCollapsedCell(newPoints, volFraction, celli)
)
{
nPrevented++;
//Pout<< "Preventing baffling/removal of 8 anchor point"
// << " cell "
// << cellI << " at " << mesh_.cellCentres()[cellI]
// << celli << " at " << mesh_.cellCentres()[celli]
// << " since new volume "
// << mesh_.cells()[cellI].mag(newPoints, mesh_.faces())
// << " old volume " << mesh_.cellVolumes()[cellI]
// << mesh_.cells()[celli].mag(newPoints, mesh_.faces())
// << " old volume " << mesh_.cellVolumes()[celli]
// << endl;
}
else
@ -794,21 +794,21 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
// Block all faces of cell
forAll(cFaces, cf)
{
label faceI = cFaces[cf];
label facei = cFaces[cf];
if
(
facePatch[faceI] == -1
&& mesh_.isInternalFace(faceI)
facePatch[facei] == -1
&& mesh_.isInternalFace(facei)
)
{
facePatch[faceI] = nearestAdaptPatch[faceI];
facePatch[facei] = nearestAdaptPatch[facei];
nBaffleFaces++;
// Mark face as a 'boundary'
markBoundaryFace
(
faceI,
facei,
isBoundaryFace,
isBoundaryEdge,
isBoundaryPoint
@ -821,7 +821,7 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
else if (nBoundaryAnchors == 7)
{
// Mark the cell. Store the (single!) non-boundary anchor point.
hasSevenBoundaryAnchorPoints.set(cellI, 1u);
hasSevenBoundaryAnchorPoints.set(celli, 1u);
nonBoundaryAnchors.insert(nonBoundaryAnchor);
}
}
@ -855,47 +855,47 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
// Point in danger of being what? Remove all 7-cells.
forAll(pCells, i)
{
label cellI = pCells[i];
label celli = pCells[i];
if (hasSevenBoundaryAnchorPoints.get(cellI) == 1u)
if (hasSevenBoundaryAnchorPoints.get(celli) == 1u)
{
if
(
checkCollapse
&& !isCollapsedCell(newPoints, volFraction, cellI)
&& !isCollapsedCell(newPoints, volFraction, celli)
)
{
nPrevented++;
//Pout<< "Preventing baffling of 7 anchor cell "
// << cellI
// << " at " << mesh_.cellCentres()[cellI]
// << celli
// << " at " << mesh_.cellCentres()[celli]
// << " since new volume "
// << mesh_.cells()[cellI].mag
// << mesh_.cells()[celli].mag
// (newPoints, mesh_.faces())
// << " old volume " << mesh_.cellVolumes()[cellI]
// << " old volume " << mesh_.cellVolumes()[celli]
// << endl;
}
else
{
const cell& cFaces = mesh_.cells()[cellI];
const cell& cFaces = mesh_.cells()[celli];
forAll(cFaces, cf)
{
label faceI = cFaces[cf];
label facei = cFaces[cf];
if
(
facePatch[faceI] == -1
&& mesh_.isInternalFace(faceI)
facePatch[facei] == -1
&& mesh_.isInternalFace(facei)
)
{
facePatch[faceI] = nearestAdaptPatch[faceI];
facePatch[facei] = nearestAdaptPatch[facei];
nBaffleFaces++;
// Mark face as a 'boundary'
markBoundaryFace
(
faceI,
facei,
isBoundaryFace,
isBoundaryEdge,
isBoundaryPoint
@ -937,11 +937,11 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
// Find faces with all edges on the boundary and make them baffles
for (label faceI = 0; faceI < mesh_.nInternalFaces(); faceI++)
for (label facei = 0; facei < mesh_.nInternalFaces(); facei++)
{
if (facePatch[faceI] == -1)
if (facePatch[facei] == -1)
{
const labelList& fEdges = mesh_.faceEdges(faceI, dynFEdges);
const labelList& fEdges = mesh_.faceEdges(facei, dynFEdges);
label nFaceBoundaryEdges = 0;
forAll(fEdges, fe)
@ -963,20 +963,20 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
neiCc,
minArea,
maxNonOrtho,
faceI
facei
)
)
{
nPrevented++;
//Pout<< "Preventing baffling (to avoid collapse) of face "
// << faceI
// << facei
// << " with all boundary edges "
// << " at " << mesh_.faceCentres()[faceI]
// << " at " << mesh_.faceCentres()[facei]
// << endl;
}
else
{
facePatch[faceI] = nearestAdaptPatch[faceI];
facePatch[facei] = nearestAdaptPatch[facei];
nBaffleFaces++;
// Do NOT update boundary data since this would grow blocked
@ -986,19 +986,19 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
}
}
forAll(patches, patchI)
forAll(patches, patchi)
{
const polyPatch& pp = patches[patchI];
const polyPatch& pp = patches[patchi];
if (pp.coupled())
{
label faceI = pp.start();
label facei = pp.start();
forAll(pp, i)
{
if (facePatch[faceI] == -1)
if (facePatch[facei] == -1)
{
const labelList& fEdges = mesh_.faceEdges(faceI, dynFEdges);
const labelList& fEdges = mesh_.faceEdges(facei, dynFEdges);
label nFaceBoundaryEdges = 0;
forAll(fEdges, fe)
@ -1020,21 +1020,21 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
neiCc,
minArea,
maxNonOrtho,
faceI
facei
)
)
{
nPrevented++;
//Pout<< "Preventing baffling of coupled face "
// << faceI
// << facei
// << " with all boundary edges "
// << " at " << mesh_.faceCentres()[faceI]
// << " at " << mesh_.faceCentres()[facei]
// << endl;
}
else
{
facePatch[faceI] = nearestAdaptPatch[faceI];
if (isMasterFace[faceI])
facePatch[facei] = nearestAdaptPatch[facei];
if (isMasterFace[facei])
{
nBaffleFaces++;
}
@ -1045,7 +1045,7 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCells
}
}
faceI++;
facei++;
}
}
}
@ -1297,15 +1297,15 @@ Foam::labelList Foam::meshRefinement::markFacesOnProblemCellsGeometric
forAllConstIter(faceSet, wrongFaces, iter)
{
label patchI = mesh_.boundaryMesh().whichPatch(iter.key());
label patchi = mesh_.boundaryMesh().whichPatch(iter.key());
if (patchI == -1 || mesh_.boundaryMesh()[patchI].coupled())
if (patchi == -1 || mesh_.boundaryMesh()[patchi].coupled())
{
facePatch[iter.key()] = nearestAdaptPatch[iter.key()];
nBaffleFaces++;
//Pout<< " " << iter.key()
// //<< " on patch " << mesh_.boundaryMesh()[patchI].name()
// //<< " on patch " << mesh_.boundaryMesh()[patchi].name()
// << " is destined for patch " << facePatch[iter.key()]
// << endl;
}