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CONT: Addition of compressibleIsoInterFOam and PLIC

Browse Source 
1) Implementation of the compressibleIsoInterFOam solver
   2) Implementation of a new PLIC interpolation scheme.
   3) New tutorials associated with the solvers

This implementation was carried out by Henning Scheufler (DLR) and Johan
Roenby (DHI), following :

\verbatim

Henning Scheufler, Johan Roenby,
Accurate and efficient surface reconstruction from volume fraction data
on general meshes, Journal of Computational Physics, 2019, doi
10.1016/j.jcp.2019.01.009

\endverbatim

The integration of the code was carried out by Andy Heather and Sergio
Ferraris from OpenCFD Ltd.
This commit is contained in:
Henning Scheufler
2020-06-05 14:31:15 +02:00
committed by Andrew Heather
parent 237f2e1076
commit 44a84d4778
166 changed files with 16335 additions and 3372 deletions
Download Patch File Download Diff File Expand all files Collapse all files

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applications/test/zoneDistribute/Make/files Normal file
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Test-zoneDistribute.C
EXE = $(FOAM_USER_APPBIN)/Test-zoneDistribute

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EXE_INC = \
-I$(LIB_SRC)/finiteVolume/lnInclude \
-I$(LIB_SRC)/fileFormats/lnInclude \
-I$(LIB_SRC)/surfMesh/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/sampling/lnInclude
EXE_LIBS = \
-lfiniteVolume \
-lfileFormats \
-lsurfMesh \
-lmeshTools \
-lsampling

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applications/test/zoneDistribute/Test-zoneDistribute.C Normal file
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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | www.openfoam.com
\\/ M anipulation |
-------------------------------------------------------------------------------
Copyright (C) 2019 OpenCFD Ltd.
Copyright (C) 2019-2020 DLR
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
Application
Test-zoneDistribute
Description
Test of zoneDistribute validated with mapDistribute
Original code supplied by Henning Scheufler, DLR (2019)
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "centredCPCCellToCellStencilObject.H"
#include "zoneDistribute.H"
#include "SortableList.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
const extendedCentredCellToCellStencil& stencil =
centredCPCCellToCellStencilObject::New(mesh);
const List<List<label>>& stencilAddr = stencil.stencil();
List<List<vector>> stencilCentre(mesh.nCells());
stencil.collectData
(
mesh.C(),
stencilCentre
);
zoneDistribute exchangeFields(mesh);
boolList interfaceCell(mesh.nCells(),true);
exchangeFields.setUpCommforZone(interfaceCell);
const labelListList& stencil_zoneDist = exchangeFields.getStencil();
const globalIndex& gblNumbering = exchangeFields.globalNumbering();
Map<vectorField> mapCC(exchangeFields.getFields(interfaceCell,mesh.C()));
// compare stencils
Pout<< "size of the stencil match "
<< (stencilAddr.size() == stencil_zoneDist.size()) << endl;
label stencilMatch = 0;
forAll(stencilAddr,celli)
{
const vectorField& neiCC = mapCC[celli];
if (neiCC.size() != stencilCentre[celli].size())
{
continue;
}
bool foundAllLabel = true;
for (const vector& cc : neiCC)
{
if (!stencilCentre[celli].found(cc))
{
foundAllLabel = false;
break;
}
}
if (foundAllLabel)
{
++stencilMatch;
}
}
if (stencilMatch == mesh.nCells())
{
Pout << "all Values are identical " << endl;
}
else
{
Pout << "values did not match in : " << stencilMatch << " of "
<< mesh.nCells() << " cases" << endl;
}
return 0;
}
// ************************************************************************* //

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#!/bin/sh
cd "${0%/*}" || exit # Run from this directory
. ${WM_PROJECT_DIR:?}/bin/tools/CleanFunctions # Tutorial clean functions
#------------------------------------------------------------------------------
cleanCase0
rm -f ./flange ./*.obj
# Remove surface and features
rm -f constant/triSurface/flange.stl.gz
rm -f constant/triSurface/flange.eMesh
rm -rf constant/extendedFeatureEdgeMesh
#------------------------------------------------------------------------------

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#!/bin/sh
cd "${0%/*}" || exit # Run from this directory
. ${WM_PROJECT_DIR:?}/bin/tools/RunFunctions # Tutorial run functions
#------------------------------------------------------------------------------
touch test-zoneDistribute.foam
runApplication blockMesh
#runApplication surfaceFeatureExtract
runApplication snappyHexMesh -overwrite
runApplication decomposePar
runParallel test-zoneDistribute
#------------------------------------------------------------------------------

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applications/test/zoneDistribute/case1/constant/triSurface/README Normal file
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Directory to house tri-surfaces
The Allrun script copies the surface from the $FOAM_TUTORIALS/resources/geometry
directory

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applications/test/zoneDistribute/case1/system/blockMeshDict Normal file
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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v1912 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object blockMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
scale 1;
vertices
(
( -1 -1 -1)
( 1 -1 -1)
( 1 1 -1)
( -1 1 -1)
( -1 -1 1)
( 1 -1 1)
( 1 1 1)
( -1 1 1)
);
blocks
(
hex (0 1 2 3 4 5 6 7) (10 10 10) simpleGrading (1 1 1)
);
edges
(
);
boundary
(
allBoundary
{
type patch;
faces
(
(3 7 6 2)
(0 4 7 3)
(2 6 5 1)
(1 5 4 0)
(0 3 2 1)
(4 5 6 7)
);
}
);
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v1912 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
location "system";
object controlDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
application snappyHexMesh;
startFrom startTime;
startTime 0;
stopAt endTime;
endTime 50;
deltaT 1;
writeControl timeStep;
writeInterval 20;
purgeWrite 0;
writeFormat ascii;
writePrecision 6;
writeCompression off;
timeFormat general;
timePrecision 6;
runTimeModifiable yes;
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v1912 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object decomposeParDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
numberOfSubdomains 8;
method simple;
coeffs
{
n (4 2 1);
}
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v1912 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
location "system";
object fvSchemes;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
gradSchemes
{
}
divSchemes
{
}
laplacianSchemes
{
}
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v1912 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
location "system";
object fvSolution;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v1912 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object meshQualityDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Include defaults parameters from master dictionary
#includeEtc "caseDicts/meshQualityDict"
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v1912 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object snappyHexMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Which of the steps to run
castellatedMesh true;
snap true;
addLayers false;
// Geometry. Definition of all surfaces. All surfaces are of class
// searchableSurface.
// Surfaces are used
// - to specify refinement for any mesh cell intersecting it
// - to specify refinement for any mesh cell inside/outside/near
// - to 'snap' the mesh boundary to the surface
geometry
{
//- Refine a bit extra around the small centre hole
sphere
{
type sphere;
origin (0 0 -0.00);
radius 0.99;
}
}
// Settings for the castellatedMesh generation.
castellatedMeshControls
{
// Refinement parameters
// ~~~~~~~~~~~~~~~~~~~~~
// If local number of cells is >= maxLocalCells on any processor
// switches from from refinement followed by balancing
// (current method) to (weighted) balancing before refinement.
maxLocalCells 100000;
// Overall cell limit (approximately). Refinement will stop immediately
// upon reaching this number so a refinement level might not complete.
// Note that this is the number of cells before removing the part which
// is not 'visible' from the keepPoint. The final number of cells might
// actually be a lot less.
maxGlobalCells 2000000;
// The surface refinement loop might spend lots of iterations refining just a
// few cells. This setting will cause refinement to stop if <= minimumRefine
// are selected for refinement. Note: it will at least do one iteration
// (unless the number of cells to refine is 0)
minRefinementCells 0;
// Number of buffer layers between different levels.
// 1 means normal 2:1 refinement restriction, larger means slower
// refinement.
nCellsBetweenLevels 1;
// Explicit feature edge refinement
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
// Specifies a level for any cell intersected by its edges.
// This is a featureEdgeMesh, read from constant/triSurface for now.
features
(
);
// Surface based refinement
// ~~~~~~~~~~~~~~~~~~~~~~~~
// Specifies two levels for every surface. The first is the minimum level,
// every cell intersecting a surface gets refined up to the minimum level.
// The second level is the maximum level. Cells that 'see' multiple
// intersections where the intersections make an
// angle > resolveFeatureAngle get refined up to the maximum level.
refinementSurfaces
{
sphere
{
// Surface-wise min and max refinement level
level (2 2);
}
}
resolveFeatureAngle 30;
// Region-wise refinement
// ~~~~~~~~~~~~~~~~~~~~~~
// Specifies refinement level for cells in relation to a surface. One of
// three modes
// - distance. 'levels' specifies per distance to the surface the
// wanted refinement level. The distances need to be specified in
// descending order.
// - inside. 'levels' is only one entry and only the level is used. All
// cells inside the surface get refined up to the level. The surface
// needs to be closed for this to be possible.
// - outside. Same but cells outside.
refinementRegions
{
// refineHole
// {
// mode inside;
// levels ((1E15 3));
// }
}
// Mesh selection
// ~~~~~~~~~~~~~~
// After refinement patches get added for all refinementSurfaces and
// all cells intersecting the surfaces get put into these patches. The
// section reachable from the locationInMesh is kept.
// NOTE: This point should never be on a face, always inside a cell, even
// after refinement.
// This is an outside point locationInMesh (-0.033 -0.033 0.0033);
locationInMesh (0 0 0); // Inside point
// Whether any faceZones (as specified in the refinementSurfaces)
// are only on the boundary of corresponding cellZones or also allow
// free-standing zone faces. Not used if there are no faceZones.
allowFreeStandingZoneFaces true;
}
// Settings for the snapping.
snapControls
{
//- Number of patch smoothing iterations before finding correspondence
// to surface
nSmoothPatch 3;
//- Relative distance for points to be attracted by surface feature point
// or edge. True distance is this factor times local
// maximum edge length.
tolerance 1.0;
//- Number of mesh displacement relaxation iterations.
nSolveIter 300;
//- Maximum number of snapping relaxation iterations. Should stop
// before upon reaching a correct mesh.
nRelaxIter 5;
// Feature snapping
//- Number of feature edge snapping iterations.
// Leave out altogether to disable.
nFeatureSnapIter 10;
//- Detect (geometric) features by sampling the surface
implicitFeatureSnap false;
//- Use castellatedMeshControls::features
explicitFeatureSnap true;
//- Detect features between multiple surfaces
// (only for explicitFeatureSnap, default = false)
multiRegionFeatureSnap true;
}
// Settings for the layer addition.
addLayersControls
{
// Are the thickness parameters below relative to the undistorted
// size of the refined cell outside layer (true) or absolute sizes (false).
relativeSizes true;
// Per final patch (so not geometry!) the layer information
layers
{
"flange_.*"
{
nSurfaceLayers 1;
}
}
// Expansion factor for layer mesh
expansionRatio 1.0;
// Wanted thickness of final added cell layer. If multiple layers
// is the thickness of the layer furthest away from the wall.
// Relative to undistorted size of cell outside layer.
// See relativeSizes parameter.
finalLayerThickness 0.3;
// Minimum thickness of cell layer. If for any reason layer
// cannot be above minThickness do not add layer.
// See relativeSizes parameter.
minThickness 0.25;
// If points get not extruded do nGrow layers of connected faces that are
// also not grown. This helps convergence of the layer addition process
// close to features.
nGrow 0;
// Advanced settings
// When not to extrude surface. 0 is flat surface, 90 is when two faces
// are perpendicular
featureAngle 30;
// Maximum number of snapping relaxation iterations. Should stop
// before upon reaching a correct mesh.
nRelaxIter 5;
// Number of smoothing iterations of surface normals
nSmoothSurfaceNormals 1;
// Number of smoothing iterations of interior mesh movement direction
nSmoothNormals 3;
// Smooth layer thickness over surface patches
nSmoothThickness 10;
// Stop layer growth on highly warped cells
maxFaceThicknessRatio 0.5;
// Reduce layer growth where ratio thickness to medial
// distance is large
maxThicknessToMedialRatio 0.3;
// Angle used to pick up medial axis points
minMedialAxisAngle 90;
// Create buffer region for new layer terminations
nBufferCellsNoExtrude 0;
// Overall max number of layer addition iterations. The mesher will exit
// if it reaches this number of iterations; possibly with an illegal
// mesh.
nLayerIter 50;
// Max number of iterations after which relaxed meshQuality controls
// get used. Up to nRelaxIter it uses the settings in meshQualityControls,
// after nRelaxIter it uses the values in meshQualityControls::relaxed.
nRelaxedIter 20;
}
// Generic mesh quality settings. At any undoable phase these determine
// where to undo.
meshQualityControls
{
#include "meshQualityDict"
// Optional : some meshing phases allow usage of relaxed rules.
// See e.g. addLayersControls::nRelaxedIter.
relaxed
{
//- Maximum non-orthogonality allowed. Set to 180 to disable.
maxNonOrtho 75;
}
// Advanced
//- Number of error distribution iterations
nSmoothScale 4;
//- Amount to scale back displacement at error points
errorReduction 0.75;
}
// Advanced
// Write flags
writeFlags
(
scalarLevels // write volScalarField with cellLevel for postprocessing
layerSets // write cellSets, faceSets of faces in layer
layerFields // write volScalarField for layer coverage
);
// Merge tolerance. Is fraction of overall bounding box of initial mesh.
// Note: the write tolerance needs to be higher than this.
mergeTolerance 1E-6;
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: v1912 |
| \\ / A nd | Website: www.openfoam.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object surfaceFeatureExtractDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
flange.stl
{
// How to obtain raw features (extractFromFile || extractFromSurface)
extractionMethod extractFromSurface;
// Mark edges whose adjacent surface normals are at an angle less
// than includedAngle as features
// - 0 : selects no edges
// - 180: selects all edges
includedAngle 150;
// Write options
// Write features to obj format for postprocessing
writeObj yes;
}
// ************************************************************************* //