Merge branch 'master' of /home/noisy3/OpenFOAM/OpenFOAM-dev

Conflicts:
	applications/utilities/mesh/manipulation/transformPoints/transformPoints.C

applications/solvers/basic/potentialFoam/potentialFoam.C

@@ -38,11 +38,9 @@ Description
 
 int main(int argc, char *argv[])
 {
-
+    argList::addBoolOption("writep", "write the final pressure field");
-    argList::validOptions.insert("writep", "");
 
 #   include "setRootCase.H"
-
 #   include "createTime.H"
 #   include "createMesh.H"
 #   include "createFields.H"

applications/solvers/combustion/PDRFoam/XiEqns

@@ -22,7 +22,7 @@
         volScalarField GEta = GEtaCoef/tauEta;
         volScalarField XiEqEta = 1.0 + XiCoef*sqrt(up/(Su + SuMin))*Reta;
 
-        volScalarField R = 
+        volScalarField R =
             GEta*XiEqEta/(XiEqEta - 0.999) + GIn*XiIn/(XiIn - 0.999);
 
         volScalarField XiEqStar = R/(R - GEta - GIn);
@@ -42,7 +42,7 @@
         volScalarField GEta = GEtaCoef/tauEta;
         volScalarField XiEqEta = 1.0 + XiCoef*sqrt(up/(Su + SuMin))*Reta;
 
-        volScalarField R = 
+        volScalarField R =
             GEta*XiEqEta/(XiEqEta - 0.999) + GIn*XiIn/(XiIn - 0.999);
 
         volScalarField XiEqStar = R/(R - GEta - GIn);

applications/solvers/combustion/PDRFoam/XiModels/algebraic/algebraic.C

@@ -91,7 +91,7 @@ bool Foam::XiModels::algebraic::read(const dictionary& XiProperties)
     XiModel::read(XiProperties);
 
     XiModelCoeffs_.lookup("XiShapeCoef") >> XiShapeCoef;
-    
+
     return true;
 }
 

applications/solvers/combustion/PDRFoam/laminarFlameSpeed/SCOPE/SCOPELaminarFlameSpeed.C

@@ -117,7 +117,7 @@ inline Foam::scalar Foam::laminarFlameSpeedModels::SCOPE::polyPhi
 {
     scalar x = phi - 1.0;
 
-    return 
+    return
         a[0]
        *(
            scalar(1)

applications/solvers/combustion/PDRFoam/setDeltaT.H

@@ -45,7 +45,7 @@ if (adjustTimeStep)
             maxDeltaT
         )
     );
-    
+
     Info<< "deltaT = " <<  runTime.deltaTValue() << endl;
 }
 

applications/solvers/combustion/dieselEngineFoam/createFields.H

@@ -88,7 +88,7 @@ volScalarField DpDt =
 
 multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;
 
-forAll (Y, i)
+forAll(Y, i)
 {
     fields.add(Y[i]);
 }

applications/solvers/combustion/reactingFoam/createFields.H

@@ -77,7 +77,7 @@ volScalarField DpDt =
 
 multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;
 
-forAll (Y, i)
+forAll(Y, i)
 {
     fields.add(Y[i]);
 }

applications/solvers/combustion/rhoReactingFoam/createFields.H

@@ -77,7 +77,7 @@ volScalarField DpDt =
 
 multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;
 
-forAll (Y, i)
+forAll(Y, i)
 {
     fields.add(Y[i]);
 }

applications/solvers/compressible/rhoCentralFoam/Allwmake

@@ -2,7 +2,7 @@
 cd ${0%/*} || exit 1    # run from this directory
 set -x
 
-wmake libso BCs 
+wmake libso BCs
 wmake
 
 # ----------------------------------------------------------------- end-of-file

applications/solvers/compressible/rhoCentralFoam/BCs/Make/options

@@ -6,5 +6,5 @@ EXE_INC = \
 EXE_LIBS = \
     -lfiniteVolume \
     -lbasicThermophysicalModels \
-	-lspecie
+    -lspecie
 

applications/solvers/compressible/rhoCentralFoam/BCs/U/maxwellSlipUFvPatchVectorField.C

@@ -22,8 +22,6 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
-Description
-
 \*---------------------------------------------------------------------------*/
 
 #include "maxwellSlipUFvPatchVectorField.H"

applications/solvers/compressible/rhoCentralFoam/BCs/mixedFixedValueSlip/mixedFixedValueSlipFvPatchFields.C

@@ -22,8 +22,6 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
 
-Description
-
 \*---------------------------------------------------------------------------*/
 
 #include "mixedFixedValueSlipFvPatchFields.H"

applications/solvers/compressible/rhoSonicFoam/rhoSonicFoam.C

@@ -84,7 +84,7 @@ int main(int argc, char *argv[])
         (
             fvm::ddt(rhoU)
           + fvm::div(phiv, rhoU)
-         == 
+         ==
           - fvc::grad(p)
         );
 

applications/solvers/compressible/rhopSonicFoam/Allwmake

@@ -2,7 +2,7 @@
 cd ${0%/*} || exit 1    # run from this directory
 set -x
 
-wmake libso BCs 
+wmake libso BCs
 wmake
 
 # ----------------------------------------------------------------- end-of-file

applications/solvers/compressible/rhopSonicFoam/BCs/p/inviscidWallPFvPatchScalarField.C

@@ -131,7 +131,7 @@ void inviscidWallPFvPatchScalarField::updateCoeffs()
     const fvPatchField<vector>& rhoUp =
         patch().lookupPatchField<volVectorField, vector>("rhoU");
 
-    const fvsPatchField<scalar>& phip = 
+    const fvsPatchField<scalar>& phip =
         patch().lookupPatchField<surfaceScalarField, scalar>("phi");
 
     const fvsPatchField<scalar>& rAp =
@@ -147,7 +147,7 @@ void inviscidWallPFvPatchScalarField::updateCoeffs()
 void inviscidWallPFvPatchScalarField::write(Ostream& os) const
 {
     fixedGradientFvPatchScalarField::write(os);
-    os.writeKeyword("fluxFraction") 
+    os.writeKeyword("fluxFraction")
         << fluxFraction_ << token::END_STATEMENT << nl;
     writeEntry("value", os);
 }

applications/solvers/compressible/rhopSonicFoam/BCs/rhoE/mixedRhoEFvPatchScalarField.C

@@ -145,7 +145,7 @@ void mixedRhoEFvPatchScalarField::updateCoeffs()
 
     const volScalarField& T = db().lookupObject<volScalarField>("T");
     const label patchi = patch().index();
-    fvPatchScalarField& Tp = 
+    fvPatchScalarField& Tp =
         const_cast<fvPatchScalarField&>(T.boundaryField()[patchi]);
 
     Tp.evaluate();
@@ -164,7 +164,7 @@ void mixedRhoEFvPatchScalarField::updateCoeffs()
     refGrad() =
         rhop*Cv.value()*Tp.snGrad()
       + (
-            refValue() 
+            refValue()
           - (0.5*rhop.patchInternalField()*
                 magSqr(rhoUp.patchInternalField()/rhop.patchInternalField()))
         )*patch().deltaCoeffs();

applications/solvers/compressible/rhopSonicFoam/BCs/rhoU/fixedRhoUFvPatchVectorField.H

@@ -66,7 +66,7 @@ public:
             const dictionary&
         );
 
-        //- Construct by mapping given fixedRhoUFvPatchVectorField 
+        //- Construct by mapping given fixedRhoUFvPatchVectorField
         //  onto a new patch
         fixedRhoUFvPatchVectorField
         (

applications/solvers/electromagnetics/electrostaticFoam/Make/files

@@ -1,3 +1,3 @@
-electrostaticFoam.C  
+electrostaticFoam.C
 
 EXE = $(FOAM_APPBIN)/electrostaticFoam

applications/solvers/incompressible/icoFoam/Make/files

@@ -1,3 +1,3 @@
-icoFoam.C  
+icoFoam.C
 
 EXE = $(FOAM_APPBIN)/icoFoam

applications/solvers/incompressible/nonNewtonianIcoFoam/Make/files

@@ -1,3 +1,3 @@
-nonNewtonianIcoFoam.C  
+nonNewtonianIcoFoam.C
 
 EXE = $(FOAM_APPBIN)/nonNewtonianIcoFoam

applications/solvers/incompressible/simpleFoam/Make/files

@@ -1,3 +1,3 @@
-simpleFoam.C 
+simpleFoam.C
 
 EXE = $(FOAM_APPBIN)/simpleFoam

applications/solvers/lagrangian/coalChemistryFoam/createFields.H

@@ -28,7 +28,7 @@
 
     multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;
 
-    forAll (Y, i)
+    forAll(Y, i)
     {
         fields.add(Y[i]);
     }

applications/solvers/lagrangian/porousExplicitSourceReactingParcelFoam/createFields.H

@@ -84,7 +84,7 @@
     Info<< "Creating multi-variate interpolation scheme\n" << endl;
     multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;
 
-    forAll (Y, i)
+    forAll(Y, i)
     {
         fields.add(Y[i]);
     }

applications/solvers/lagrangian/reactingParcelFoam/createFields.H

@@ -90,7 +90,7 @@
 
     multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;
 
-    forAll (Y, i)
+    forAll(Y, i)
     {
         fields.add(Y[i]);
     }

applications/solvers/lagrangian/uncoupledKinematicParcelFoam/createFields.H

@@ -47,8 +47,10 @@
         )
     );
 
-    word kinematicCloudName("kinematicCloud");
+    const word kinematicCloudName
-    args.optionReadIfPresent("cloudName", kinematicCloudName);
+    (
+        args.optionLookupOrDefault<word>("cloudName", "kinematicCloud")
+    );
 
     Info<< "Constructing kinematicCloud " << kinematicCloudName << endl;
     basicKinematicCloud kinematicCloud

applications/solvers/lagrangian/uncoupledKinematicParcelFoam/uncoupledKinematicParcelFoam.C

@@ -42,7 +42,7 @@ Description
 
 int main(int argc, char *argv[])
 {
-    argList::validOptions.insert("cloudName", "cloud name");
+    argList::addOption("cloudName", "cloud name");
 
     #include "setRootCase.H"
     #include "createTime.H"

applications/solvers/multiphase/bubbleFoam/UEqns.H

@@ -41,7 +41,7 @@ fvVectorMatrix UbEqn(Ub, Ub.dimensions()*dimVol/dimTime);
        - fvc::interpolate(nuEffb)
         *mesh.magSf()*fvc::snGrad(beta)/fvc::interpolate(beta + scalar(0.001));
 
-    UbEqn = 
+    UbEqn =
     (
         (scalar(1) + Cvm*rhob*alpha/rhob)*
         (

applications/solvers/multiphase/cavitatingFoam/CourantNo.H

@@ -36,7 +36,7 @@ scalar acousticCoNum = 0.0;
 
 if (mesh.nInternalFaces())
 {
-    surfaceScalarField SfUfbyDelta = 
+    surfaceScalarField SfUfbyDelta =
         mesh.surfaceInterpolation::deltaCoeffs()*mag(phiv);
 
     CoNum = max(SfUfbyDelta/mesh.magSf())

applications/solvers/multiphase/cavitatingFoam/continuityErrs.H

@@ -3,12 +3,12 @@
 
     dimensionedScalar totalMass = fvc::domainIntegrate(rho);
 
-    scalar sumLocalContErr = 
+    scalar sumLocalContErr =
     (
         fvc::domainIntegrate(mag(rho - thermoRho))/totalMass
     ).value();
 
-    scalar globalContErr = 
+    scalar globalContErr =
     (
         fvc::domainIntegrate(rho - thermoRho)/totalMass
     ).value();

applications/solvers/multiphase/cavitatingFoam/setDeltaT.H

@@ -47,7 +47,7 @@ if (adjustTimeStep)
             maxDeltaT
         )
     );
-    
+
     Info<< "deltaT = " <<  runTime.deltaTValue() << endl;
 }
 

applications/solvers/multiphase/multiphaseInterFoam/multiphaseMixture/alphaContactAngle/alphaContactAngleFvPatchScalarField.C

@@ -63,7 +63,7 @@ Ostream& operator<<
 )
 {
     os  << tp.theta0_ << token::SPACE
-        << tp.uTheta_ << token::SPACE 
+        << tp.uTheta_ << token::SPACE
         << tp.thetaA_ << token::SPACE
         << tp.thetaR_;
 

applications/solvers/multiphase/multiphaseInterFoam/multiphaseMixture/phase/phase.C

@@ -28,7 +28,7 @@ License
 
 // * * * * * * * * * * * * * * * * Constructors  * * * * * * * * * * * * * * //
 
-Foam::phase::phase 
+Foam::phase::phase
 (
     const word& name,
     const dictionary& phaseDict,

applications/solvers/multiphase/settlingFoam/correctViscosity.H

@@ -1,5 +1,5 @@
 {
-    mul = muc + 
+    mul = muc +
         plasticViscosity
         (
             plasticViscosityCoeff,

applications/solvers/multiphase/twoPhaseEulerFoam/UEqns.H

@@ -56,7 +56,7 @@ fvVectorMatrix UbEqn(Ub, Ub.dimensions()*dimVol/dimTime);
             -fvc::interpolate(nuEffb)*mesh.magSf()*fvc::snGrad(beta)
             /fvc::interpolate(beta + scalar(0.001));
 
-        UbEqn = 
+        UbEqn =
         (
             (scalar(1) + Cvm*rhob*alpha/rhob)*
             (

applications/solvers/multiphase/twoPhaseEulerFoam/interfacialModels/dragModels/GidaspowErgunWenYu/GidaspowErgunWenYu.C

@@ -89,7 +89,7 @@ Foam::tmp<Foam::volScalarField> Foam::GidaspowErgunWenYu::K
     volScalarField& KWenYu = tKWenYu();
 
     // Ergun
-    forAll (beta, cellj)
+    forAll(beta, cellj)
     {
         if (beta[cellj] <= 0.8)
         {

applications/solvers/multiphase/twoPhaseEulerFoam/interfacialModels/dragModels/SyamlalOBrien/SyamlalOBrien.C

@@ -73,7 +73,7 @@ Foam::tmp<Foam::volScalarField> Foam::SyamlalOBrien::K
     volScalarField A = pow(beta, 4.14);
     volScalarField B = 0.8*pow(beta, 1.28);
 
-    forAll (beta, celli)
+    forAll(beta, celli)
     {
         if (beta[celli] > 0.85)
         {

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/conductivityModel/conductivityModel/newConductivityModel.C

@@ -35,9 +35,9 @@ Foam::autoPtr<Foam::conductivityModel> Foam::conductivityModel::New
 {
     word conductivityModelType(dict.lookup("conductivityModel"));
 
-    Info<< "Selecting conductivityModel " 
+    Info<< "Selecting conductivityModel "
         << conductivityModelType << endl;
-        
+
     dictionaryConstructorTable::iterator cstrIter =
         dictionaryConstructorTablePtr_->find(conductivityModelType);
 

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/frictionalStressModel/JohnsonJackson/JohnsonJacksonFrictionalStress.C

@@ -73,7 +73,7 @@ frictionalPressure
 ) const
 {
 
-    return 
+    return
         Fr*pow(max(alpha - alphaMinFriction, scalar(0)), eta)
        /pow(max(alphaMax - alpha, scalar(5.0e-2)), p);
 }
@@ -104,9 +104,9 @@ Foam::tmp<Foam::volScalarField> Foam::JohnsonJacksonFrictionalStress::muf
     const dimensionedScalar& alphaMax,
     const volScalarField& pf,
     const volTensorField& D,
-    const dimensionedScalar& phi            
+    const dimensionedScalar& phi
 ) const
-{    
+{
     return dimensionedScalar("0.5", dimTime, 0.5)*pf*sin(phi);
 }
 

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/frictionalStressModel/Schaeffer/SchaefferFrictionalStress.C

@@ -125,7 +125,7 @@ Foam::tmp<Foam::volScalarField> Foam::SchaefferFrictionalStress::muf
 
     volScalarField& muff = tmuf();
 
-    forAll (D, celli)
+    forAll(D, celli)
     {
         if (alpha[celli] > alphaMax.value()-5e-2)
         {

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/frictionalStressModel/frictionalStressModel/newFrictionalStressModel.C

@@ -35,9 +35,9 @@ Foam::autoPtr<Foam::frictionalStressModel> Foam::frictionalStressModel::New
 {
     word frictionalStressModelType(dict.lookup("frictionalStressModel"));
 
-    Info<< "Selecting frictionalStressModel " 
+    Info<< "Selecting frictionalStressModel "
         << frictionalStressModelType << endl;
-        
+
     dictionaryConstructorTable::iterator cstrIter =
         dictionaryConstructorTablePtr_->find(frictionalStressModelType);
 

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/granularPressureModel/granularPressureModel/newGranularPressureModel.C

@@ -35,9 +35,9 @@ Foam::autoPtr<Foam::granularPressureModel> Foam::granularPressureModel::New
 {
     word granularPressureModelType(dict.lookup("granularPressureModel"));
 
-    Info<< "Selecting granularPressureModel " 
+    Info<< "Selecting granularPressureModel "
         << granularPressureModelType << endl;
-        
+
     dictionaryConstructorTable::iterator cstrIter =
         dictionaryConstructorTablePtr_->find(granularPressureModelType);
 

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/radialModel/CarnahanStarling/CarnahanStarlingRadial.C

@@ -65,7 +65,7 @@ Foam::tmp<Foam::volScalarField> Foam::CarnahanStarlingRadial::g0
 ) const
 {
 
-    return 
+    return
         1.0/(1.0 - alpha)
       + 3.0*alpha/(2.0*sqr(1.0 - alpha))
       + sqr(alpha)/(2.0*pow(1.0 - alpha, 3));
@@ -78,8 +78,8 @@ Foam::tmp<Foam::volScalarField> Foam::CarnahanStarlingRadial::g0prime
     const dimensionedScalar& alphaMax
 ) const
 {
-    return 
+    return
-        - alpha/sqr(1.0 - alpha) 
+        - alpha/sqr(1.0 - alpha)
         + (3.0*(1.0 - alpha) + 6.0*sqr(alpha))/(2.0*(1.0 - alpha))
         + (2.0*alpha*(1.0 - alpha) + 3.0*pow(alpha, 3))
          /(2.0*pow(1.0 - alpha, 4));

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/radialModel/Gidaspow/GidaspowRadial.C

@@ -74,7 +74,7 @@ Foam::tmp<Foam::volScalarField> Foam::GidaspowRadial::g0prime
     const dimensionedScalar& alphaMax
 ) const
 {
-    return 
+    return
         (-1.0/5.0)*pow(alpha/alphaMax, -2.0/3.0)
        /(alphaMax*sqr(1.0 - pow(alpha/alphaMax, 1.0/3.0)));
 }

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/radialModel/SinclairJackson/SinclairJacksonRadial.C

@@ -74,7 +74,7 @@ Foam::tmp<Foam::volScalarField> Foam::SinclairJacksonRadial::g0prime
     const dimensionedScalar& alphaMax
 ) const
 {
-    return 
+    return
         (-1.0/3.0)*pow(alpha/alphaMax, -2.0/3.0)
        /(alphaMax*sqr(1.0 - pow(alpha/alphaMax, 1.0/3.0)));
 }

applications/solvers/multiphase/twoPhaseEulerFoam/kineticTheoryModels/radialModel/radialModel/newRadialModel.C

@@ -35,9 +35,9 @@ Foam::autoPtr<Foam::radialModel> Foam::radialModel::New
 {
     word radialModelType(dict.lookup("radialModel"));
 
-    Info<< "Selecting radialModel " 
+    Info<< "Selecting radialModel "
         << radialModelType << endl;
-        
+
     dictionaryConstructorTable::iterator cstrIter =
         dictionaryConstructorTablePtr_->find(radialModelType);
 

applications/solvers/multiphase/twoPhaseEulerFoam/pEqn.H

@@ -42,7 +42,7 @@
 
     phib = (fvc::interpolate(Ub) & mesh.Sf()) + fvc::ddtPhiCorr(rUbA, Ub, phib)
          + phiDragb;
-    
+
     phi = alphaf*phia + betaf*phib;
 
     surfaceScalarField Dp("(rho*(1|A(U)))", alphaf*rUaAf/rhoa + betaf*rUbAf/rhob);

applications/solvers/multiphase/twoPhaseEulerFoam/packingLimiter.H

@@ -7,20 +7,20 @@
         labelListList neighbour = mesh.cellCells();
         scalarField cellVolumes = mesh.cellVolumes();
 
-        forAll (alphaEx, celli)
+        forAll(alphaEx, celli)
         {
             // Finding the labels of the neighbouring cells
             labelList neighbourCell = neighbour[celli];
 
             // Initializing neighbouring cells contribution
             scalar neighboursEx = 0.0;
-           
+
-            forAll (neighbourCell, cellj)
+            forAll(neighbourCell, cellj)
             {
                 labelList neighboursNeighbour = neighbour[neighbourCell[cellj]];
                 scalar neighboursNeighbourCellVolumes = 0.0;
-        
+
-                forAll (neighboursNeighbour, cellk)
+                forAll(neighboursNeighbour, cellk)
                 {
                     neighboursNeighbourCellVolumes +=
                         cellVolumes[neighboursNeighbour[cellk]];

applications/solvers/stressAnalysis/solidDisplacementFoam/tractionDisplacement/tractionDisplacementFvPatchVectorField.C

@@ -177,7 +177,7 @@ void tractionDisplacementFvPatchVectorField::updateCoeffs()
     gradient() =
     (
         (traction_ + pressure_*n)/rho.value()
-      + twoMuLambda*fvPatchField<vector>::snGrad() - (n & sigmaD) 
+      + twoMuLambda*fvPatchField<vector>::snGrad() - (n & sigmaD)
     )/twoMuLambda;
 
     Switch thermalStress(thermalProperties.lookup("thermalStress"));
@@ -187,7 +187,7 @@ void tractionDisplacementFvPatchVectorField::updateCoeffs()
         dimensionedScalar alpha(thermalProperties.lookup("alpha"));
         dimensionedScalar threeKalpha = threeK*alpha;
 
-        const fvPatchField<scalar>& T = 
+        const fvPatchField<scalar>& T =
             patch().lookupPatchField<volScalarField, scalar>("T");
 
         gradient() += n*threeKalpha.value()*T/twoMuLambda;

applications/solvers/stressAnalysis/solidEquilibriumDisplacementFoam/solidEquilibriumDisplacementFoam.C

@@ -72,7 +72,7 @@ int main(int argc, char *argv[])
         {
             volTensorField gradDcorr = fvc::grad(Dcorr);
 
-            sigmaExp = 
+            sigmaExp =
                 (lambda - mu)*gradDcorr + mu*gradDcorr.T()
               + (lambda*I)*tr(gradDcorr);
 

applications/solvers/stressAnalysis/solidEquilibriumDisplacementFoam/tractionDisplacementCorrection/tractionDisplacementCorrectionFvPatchVectorField.C

@@ -171,7 +171,7 @@ void tractionDisplacementCorrectionFvPatchVectorField::updateCoeffs()
     const fvPatchField<symmTensor>& sigmaD =
         patch().lookupPatchField<volSymmTensorField, symmTensor>("sigmaD");
 
-    const fvPatchField<tensor>& sigmaExp = 
+    const fvPatchField<tensor>& sigmaExp =
         patch().lookupPatchField<volTensorField, tensor>("sigmaExp");
 
     gradient() =

applications/test/BSpline/Make/files

@@ -1,3 +0,0 @@
-BSplineTest.C
-
-EXE = $(FOAM_USER_APPBIN)/BSplineTest

applications/test/BSpline/test-splines

@@ -1,69 +0,0 @@
-/*--------------------------------*- C++ -*----------------------------------*\
-| =========                 |                                                 |
-| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
-|  \\    /   O peration     | Version:  1.6                                   |
-|   \\  /    A nd           | Web:      http://www.OpenFOAM.org               |
-|    \\/     M anipulation  |                                                 |
-\*---------------------------------------------------------------------------*/
-(
-    // Upper body longitudinal splines.
-    (
-        (-0.22685 -0.01125166 0)       // 7
-        (-0.21685 -0.01340204 0)
-        (-0.20685 -0.01529684 0)
-        (-0.19685 -0.01694748 0)
-        (-0.18685 -0.01836538 0)
-        (-0.17685 -0.01956197 0)
-        (-0.16685 -0.02054868 0)
-        (-0.15685 -0.02133693 0)
-        (-0.14685 -0.02193816 0)
-        (-0.13685 -0.02236377 0)
-        (-0.12685 -0.02262521 0)
-        (-0.11685 -0.02273389 0)       // 2
-    )
-
-    (
-        (-0.22685 0 0.01125166)        // 8
-        (-0.21685 0 0.01340204)
-        (-0.20685 0 0.01529684)
-        (-0.19685 0 0.01694748)
-        (-0.18685 0 0.01836538)
-        (-0.17685 0 0.01956197)
-        (-0.16685 0 0.02054868)
-        (-0.15685 0 0.02133693)
-        (-0.14685 0 0.02193816)
-        (-0.13685 0 0.02236377)
-        (-0.12685 0 0.02262521)
-        (-0.11685 0 0.02273389)        // 3
-    )
-
-    (
-        (-0.22685 0.01125166 0)        // 9
-        (-0.21685 0.01340204 0)
-        (-0.20685 0.01529684 0)
-        (-0.19685 0.01694748 0)
-        (-0.18685 0.01836538 0)
-        (-0.17685 0.01956197 0)
-        (-0.16685 0.02054868 0)
-        (-0.15685 0.02133693 0)
-        (-0.14685 0.02193816 0)
-        (-0.13685 0.02236377 0)
-        (-0.12685 0.02262521 0)
-        (-0.11685 0.02273389 0)        // 4
-    )
-
-    (
-        (-0.22685 0 -0.01125166)       // 6
-        (-0.21685 0 -0.01340204)
-        (-0.20685 0 -0.01529684)
-        (-0.19685 0 -0.01694748)
-        (-0.18685 0 -0.01836538)
-        (-0.17685 0 -0.01956197)
-        (-0.16685 0 -0.02054868)
-        (-0.15685 0 -0.02133693)
-        (-0.14685 0 -0.02193816)
-        (-0.13685 0 -0.02236377)
-        (-0.12685 0 -0.02262521)
-        (-0.11685 0 -0.02273389)       // 1
-    )
-);

applications/test/List/ListTest.C

@@ -47,11 +47,11 @@ using namespace Foam;
 int main(int argc, char *argv[])
 {
     argList::noParallel();
-    argList::validOptions.insert("reList", "reList");
+    argList::addOption("reList", "reList");
-    argList::validOptions.insert("wordList", "wordList");
+    argList::addOption("wordList", "wordList");
-    argList::validOptions.insert("stringList", "stringList");
+    argList::addOption("stringList", "stringList");
-    argList::validOptions.insert("float", "xx");
+    argList::addOption("float", "xx");
-    argList::validOptions.insert("flag", "");
+    argList::addBoolOption("flag");
 
 #   include "setRootCase.H"
 

applications/test/PackedList/PackedListTest.C

@@ -82,9 +82,13 @@ int main(int argc, char *argv[])
     argList::noParallel();
     argList::validArgs.insert("file .. fileN");
 
-    argList::validOptions.insert("mask", "");
+    argList::addBoolOption("mask", "report information about the bit masks");
-    argList::validOptions.insert("count", "");
+    argList::addBoolOption("count", "test the count() method");
-    argList::validOptions.insert("info", "");
+    argList::addBoolOption
+    (
+        "info",
+        "print an ascii representation of the storage"
+    );
 
     argList args(argc, argv, false, true);
 

applications/test/PackedList1/PackedListTest1.C

@@ -58,9 +58,15 @@ int main(int argc, char *argv[])
     list1.print(Info);
 
     Info<< "\ntest set() with default argument (max_value)\n";
+    list1.set(1);
     list1.set(3);
     list1.print(Info);
 
+    Info<< "\ntest unset() with in-range and out-of-range\n";
+    list1.unset(3);
+    list1.unset(100000);
+    list1.print(Info);
+
     Info<< "\ntest assign between references\n";
     list1[2] = 3;
     list1[4] = list1[2];

applications/test/PackedList3/Make/files

@@ -0,0 +1,3 @@
+PackedListTest3.C
+
+EXE = $(FOAM_USER_APPBIN)/PackedListTest3

applications/test/PackedList3/PackedListTest3.C

@@ -22,43 +22,51 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
-\*---------------------------------------------------------------------------*/
+Application
-#include "argList.H"
 
-#include "vector.H"
+Description
-#include "IFstream.H"
+
-#include "BSpline.H"
+\*---------------------------------------------------------------------------*/
+
+#include "argList.H"
+#include "boolList.H"
+#include "HashSet.H"
+#include "StaticHashTable.H"
+#include "cpuTime.H"
+#include <vector>
+#include "PackedList.H"
+#include "PackedBoolList.H"
 
 using namespace Foam;
 
 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+
 // Main program:
 
 int main(int argc, char *argv[])
 {
-    argList::noParallel();
+    const label n = 100000000;
-    argList::validArgs.insert("file .. fileN");
+    const label nReport = 1000000;
 
-    argList args(argc, argv, false, true);
+    cpuTime timer;
 
-    forAll(args.additionalArgs(), argI)
+    // test inserts
+    // PackedBoolList
+    PackedBoolList packed;
+    for (label i = 0; i < n; i++)
     {
-        const string& srcFile = args.additionalArgs()[argI];
+        if ((i % nReport) == 0 && i)
-        Info<< nl << "reading " << srcFile << nl;
-        IFstream ifs(srcFile);
-
-        List<pointField> splinePointFields(ifs);
-
-        forAll(splinePointFields, splineI)
         {
-            Info<<"convert " << splinePointFields[splineI] << " to bspline" << endl;
+            Info<< "i:" << i << " in " << timer.cpuTimeIncrement() << " s" 
-
+                <<endl;
-            BSpline spl(splinePointFields[splineI], vector::zero, vector::zero);
-
-            Info<< "1/2 = " << spl.position(0.5) << endl;
         }
+        packed[i] = 1;
     }
+    Info<< "insert test: " << n << " elements in "
+        << timer.cpuTimeIncrement() << " s\n\n";
 
+    Info << "\nEnd\n" << endl;
 
     return 0;
 }

applications/test/fileNameClean/fileNameCleanTest.C

@@ -66,17 +66,18 @@ int main(int argc, char *argv[])
     argList::noBanner();
     argList::noParallel();
     argList::validArgs.insert("fileName .. fileNameN");
+    argList::addOption("istream", "fileName", "test Istream values");
 
     argList args(argc, argv, false, true);
 
-    if (args.additionalArgs().empty())
+    if (args.additionalArgs().empty() && args.options().empty())
     {
         args.printUsage();
     }
 
-    if (args.optionFound("case"))
+    fileName pathName;
+    if (args.optionReadIfPresent("case", pathName))
     {
-        fileName pathName = args.option("case");
         Info<< nl
             << "-case" << nl
             << "path = " << args.path() << nl
@@ -91,7 +92,23 @@ int main(int argc, char *argv[])
 
     forAll(args.additionalArgs(), argI)
     {
-        fileName pathName = args.additionalArgs()[argI];
+        pathName = args.additionalArgs()[argI];
+        printCleaning(pathName);
+    }
+
+    if (args.optionFound("istream"))
+    {
+        args.optionLookup("istream")() >> pathName;
+
+        Info<< nl
+            << "-case" << nl
+            << "path = " << args.path() << nl
+            << "root = " << args.rootPath() << nl
+            << "case = " << args.caseName() << nl
+            << "FOAM_CASE=" << getEnv("FOAM_CASE") << nl
+            << "FOAM_CASENAME=" << getEnv("FOAM_CASENAME") << nl
+            << endl;
+
         printCleaning(pathName);
     }
 

applications/test/fvSolutionCombine/fvSolutionCombine.C

@@ -98,8 +98,9 @@ bool checkDictionaryContent(const dictionary& dict1, const dictionary& dict2)
 int main(int argc, char *argv[])
 {
     argList::noParallel();
-    argList::validOptions.insert("rewrite", "");
+    argList::addBoolOption("rewrite");
-    argList::validOptions.insert("show", "");
+    argList::addBoolOption("show");
+
     argList args(argc, argv);
 
     Time runTime(args.rootPath(), args.caseName());

applications/test/mvBak/mvBakTest.C

@@ -39,8 +39,9 @@ int main(int argc, char *argv[])
     argList::noBanner();
     argList::noParallel();
     argList::validArgs.insert("file .. fileN");
-    argList::validOptions.erase("case");
+
-    argList::validOptions.insert("ext", "bak");
+    argList::removeOption("case");
+    argList::addOption("ext", "bak");
 
     argList args(argc, argv, false, true);
 

applications/test/nearWallDist-wave/testWallDist2.C

@@ -73,7 +73,7 @@ int main(int argc, char *argv[])
 
     // Count walls
     label nWalls = 0;
-    forAll (mesh.boundary(), patchI)
+    forAll(mesh.boundary(), patchI)
     {
         const fvPatch& patch = mesh.boundary()[patchI];
 
@@ -87,13 +87,13 @@ int main(int argc, char *argv[])
     labelList changedFaces(nWalls);
 
     label nChangedFaces = 0;
-    forAll (mesh.boundary(), patchI)
+    forAll(mesh.boundary(), patchI)
     {
         const fvPatch& patch = mesh.boundary()[patchI];
 
         if (isA<wallFvPatch>(patch))
         {
-            forAll (patch.Cf(), patchFaceI)
+            forAll(patch.Cf(), patchFaceI)
             {
                 const polyPatch& polyPatch = mesh.boundaryMesh()[patchI];
 
@@ -170,7 +170,7 @@ int main(int argc, char *argv[])
         }
 
         // Copy boundary values
-        forAll (wallDistUncorrected.boundaryField(), patchI)
+        forAll(wallDistUncorrected.boundaryField(), patchI)
         {
             fvPatchScalarField& patchField =
                 wallDistUncorrected.boundaryField()[patchI];

applications/test/readCHEMKINIII/readCHEMKINIII.C

@@ -38,7 +38,7 @@ int main(int argc, char *argv[])
 {
     argList::validArgs.clear();
     argList::validArgs.append("CHEMKINIIIFile");
-    argList::validOptions.insert("thermo", "fileName");
+    argList::addOption("thermo", "fileName");
     argList args(argc, argv);
 
     fileName thermoFileName = fileName::null;
@@ -72,7 +72,7 @@ int main(int argc, char *argv[])
 
         PtrList<gasReaction> testReactions(nReactions);
 
-        forAll (testReactions, i)
+        forAll(testReactions, i)
         {
             testReactions.set
             (

applications/test/router/processorRouter.C

@@ -53,7 +53,7 @@ labelList procNeighbours(const polyMesh& mesh)
 
     label nNeighbours = 0;
 
-    forAll (mesh.boundaryMesh(), patchI)
+    forAll(mesh.boundaryMesh(), patchI)
     {
         if (isA<processorPolyPatch>(mesh.boundaryMesh()[patchI]))
         {
@@ -65,7 +65,7 @@ labelList procNeighbours(const polyMesh& mesh)
 
     nNeighbours = 0;
 
-    forAll (mesh.boundaryMesh(), patchI)
+    forAll(mesh.boundaryMesh(), patchI)
     {
         if (isA<processorPolyPatch>(mesh.boundaryMesh()[patchI]))
         {

applications/test/sizeof/Make/files

@@ -0,0 +1,3 @@
+sizeofTest.C
+
+EXE = $(FOAM_USER_APPBIN)/sizeofTest

applications/test/sizeof/Make/options

@@ -0,0 +1,2 @@
+/* EXE_INC = -I$(LIB_SRC)/cfdTools/include */
+/* EXE_LIBS = -lfiniteVolume */

applications/test/sizeof/sizeofTest.C

@@ -22,41 +22,83 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
+Description
+    Test the sizeof various classes.
+
 \*---------------------------------------------------------------------------*/
 
-#include "argList.H"
+#include "bool.H"
+#include "Switch.H"
+#include "string.H"
+#include "dictionary.H"
+#include "nil.H"
+#include "IOstreams.H"
+#include "IStringStream.H"
 
-// * * * * * * * * * * * * * * * Member Functions  * * * * * * * * * * * * * //
+namespace Foam
-
-template<class T>
-T Foam::argList::optionRead(const word& opt) const
 {
-    T val;
+   class hasBoolClass
+   {
+   public:
+      bool b_;
+
+      hasBoolClass(const bool val=false)
+      :
+          b_(false)
+      {}
+   };
 
-    optionLookup(opt)() >> val;
-    return val;
 }
 
 
-template<class T>
+using namespace Foam;
-bool Foam::argList::optionReadIfPresent(const word& opt, T& val) const
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+// Main program:
+
+int main(int argc, char *argv[])
 {
-    if (optionFound(opt))
+    cout<<"sizeof\n------\n";
     {
-        val = optionRead<T>(opt);
+        nil x;
-        return true;
+        cout<<"nil:" << sizeof(x) << nl;
     }
-    else
     {
-        return false;
+        bool x(0);
+        cout<<"bool:" << sizeof(x) << nl;
+    }
+    {
+        hasBoolClass x(true);
+        cout<<"hasBoolClass:" << sizeof(x) << nl;
+    }
+
+    {
+        Switch x("n");
+        cout<<"Switch:" << sizeof(x) << nl;
+        cout<<"Switch::switchType=" << sizeof(Switch::switchType) << nl;
+    }
+
+    {
+        scalar x(0);
+        cout<<"scalar:" << sizeof(x) << nl;
+    }
+
+    {
+        label x(0);
+        cout<<"label:" << sizeof(x) << nl;
+    }
+
+    {
+        cout<<"int:" << sizeof(int) << nl;
+        cout<<"long:" << sizeof(long) << nl;
+        cout<<"float:" << sizeof(float) << nl;
+        cout<<"double:" << sizeof(double) << nl;
     }
-}
 
 
-template<class T>
+    Info << "---\nEnd\n" << endl;
-Foam::List<T> Foam::argList::optionReadList(const word& opt) const
+
-{
+    return 0;
-    return readList<T>(optionLookup(opt)());
 }
 
 

applications/test/spline/Make/files

@@ -0,0 +1,3 @@
+splineTest.C
+
+EXE = $(FOAM_USER_APPBIN)/splineTest

applications/test/spline/splineTest.C

@@ -0,0 +1,137 @@
+/*---------------------------------------------------------------------------*\
+  =========                 |
+  \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
+   \\    /   O peration     |
+    \\  /    A nd           | Copyright (C) 2009-2009 OpenCFD Ltd.
+     \\/     M anipulation  |
+-------------------------------------------------------------------------------
+License
+    This file is part of OpenFOAM.
+
+    OpenFOAM is free software; you can redistribute it and/or modify it
+    under the terms of the GNU General Public License as published by the
+    Free Software Foundation; either version 2 of the License, or (at your
+    option) any later version.
+
+    OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
+    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+    FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
+    for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with OpenFOAM; if not, write to the Free Software Foundation,
+    Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+
+\*---------------------------------------------------------------------------*/
+#include "argList.H"
+
+#include "vector.H"
+#include "IFstream.H"
+
+#include "BSpline.H"
+#include "CatmullRomSpline.H"
+
+using namespace Foam;
+
+inline Ostream& printPoint(Ostream& os, const point& p)
+{
+    os  << p.x() << ' ' << p.y() << ' ' << p.z() << nl;
+    return os;
+}
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+// Main program:
+
+int main(int argc, char *argv[])
+{
+    argList::noParallel();
+    argList::validArgs.insert("file .. fileN");
+    argList::addBoolOption("B", "B-Spline implementation");
+    argList::addBoolOption("CMR", "catmull-rom spline (default)");
+    argList::addOption
+    (
+        "n",
+        "INT",
+        "number of segments for evaluation - default 20"
+    );
+
+    argList args(argc, argv, false, true);
+
+    if (args.additionalArgs().empty())
+    {
+        args.printUsage();
+    }
+
+    bool useBSpline = args.optionFound("B");
+    bool useCatmullRom = args.optionFound("CMR");
+    label nSeg = args.optionLookupOrDefault<label>("n", 20);
+
+    if (!useCatmullRom && !useBSpline)
+    {
+        Info<<"defaulting to Catmull-Rom spline" << endl;
+        useCatmullRom = true;
+    }
+
+    forAll(args.additionalArgs(), argI)
+    {
+        const string& srcFile = args.additionalArgs()[argI];
+        Info<< nl << "reading " << srcFile << nl;
+        IFstream ifs(srcFile);
+
+        List<pointField> pointFields(ifs);
+
+
+        forAll(pointFields, splineI)
+        {
+            Info<<"\n# points:" << endl;
+            forAll(pointFields[splineI], ptI)
+            {
+                printPoint(Info, pointFields[splineI][ptI]);
+            }
+
+            if (useBSpline)
+            {
+                BSpline spl(pointFields[splineI]);
+
+                Info<< nl << "# B-Spline" << endl;
+
+                for (label segI = 0; segI <= nSeg; ++segI)
+                {
+                    scalar lambda = scalar(segI)/scalar(nSeg);
+                    printPoint(Info, spl.position(lambda));
+                }
+            }
+
+            if (useCatmullRom)
+            {
+                CatmullRomSpline spl(pointFields[splineI]);
+
+                Info<< nl <<"# Catmull-Rom" << endl;
+
+                for (label segI = 0; segI <= nSeg; ++segI)
+                {
+                    scalar lambda = scalar(segI)/scalar(nSeg);
+                    printPoint(Info, spl.position(lambda));
+                }
+            }
+
+            {
+                polyLine pl(pointFields[splineI]);
+
+                Info<< nl <<"# polyList" << endl;
+
+                for (label segI = 0; segI <= nSeg; ++segI)
+                {
+                    scalar lambda = scalar(segI)/scalar(nSeg);
+                    printPoint(Info, pl.position(lambda));
+                }
+            }
+        }
+    }
+
+    return 0;
+}
+
+
+// ************************************************************************* //

applications/test/spline/test-splines

@@ -0,0 +1,46 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
+|  \\    /   O peration     | Version:  1.6                                   |
+|   \\  /    A nd           | Web:      http://www.OpenFOAM.org               |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+(
+    // Upper body longitudinal splines
+    (
+        (0.22685 0.01125166 0)       // 7
+        (0.21685 0.01340204 0)
+        (0.20685 0.01529684 0)
+        (0.19685 0.01694748 0)
+        (0.18685 0.01836538 0)
+        (0.17685 0.01956197 0)
+        (0.16685 0.02054868 0)
+        (0.15685 0.02133693 0)
+        (0.14685 0.02193816 0)
+        (0.13685 0.02236377 0)
+        (0.12685 0.02262521 0)
+        (0.11685 0.02273389 0)       // 2
+    )
+
+    // sine function
+    (
+        (0    0 0)
+        (45   0.70707  0)
+        (90   1 0)
+        (135  0.70707  0)
+        (180  0 0)
+        (225 -0.70707  0)
+        (270 -1 0)
+        (315 -0.70707  0)
+        (360  0 0)
+    )
+
+    // cosine function, but with extremely few points
+    (
+        (0    1 0)
+        (180 -1 0)
+        (360  1 0)
+    )
+
+
+);

applications/test/tokenizeTest/tokenizeTest.C

@@ -44,16 +44,14 @@ int main(int argc, char *argv[])
 {
     argList::noParallel();
     argList::validArgs.insert("string .. stringN");
-    argList::validOptions.insert("file", "name");
+    argList::addOption("file", "name");
-    argList::validOptions.insert("repeat", "count");
+    argList::addOption("repeat", "count");
 
     argList args(argc, argv, false, true);
 
-    label repeat = 1;
+    const label repeat = args.optionLookupOrDefault<label>("repeat", 1);
-    args.optionReadIfPresent<label>("repeat", repeat);
 
     cpuTime timer;
-
     for (label count = 0; count < repeat; ++count)
     {
         forAll(args.additionalArgs(), argI)

applications/utilities/errorEstimation/estimateScalarError/Make/options

@@ -1,5 +1,5 @@
 EXE_INC = \
-	-I$(LIB_SRC)/finiteVolume/lnInclude \
+    -I$(LIB_SRC)/finiteVolume/lnInclude \
     -I$(LIB_SRC)/errorEstimation/lnInclude
 
 EXE_LIBS = \

applications/utilities/errorEstimation/icoErrorEstimate/Make/options

@@ -1,5 +1,5 @@
 EXE_INC = \
-	-I$(LIB_SRC)/finiteVolume/lnInclude \
+    -I$(LIB_SRC)/finiteVolume/lnInclude \
     -I$(LIB_SRC)/errorEstimation/lnInclude
 
 EXE_LIBS = \

applications/utilities/errorEstimation/icoMomentError/Make/options

@@ -1,5 +1,5 @@
 EXE_INC = \
-	-I$(LIB_SRC)/finiteVolume/lnInclude \
+    -I$(LIB_SRC)/finiteVolume/lnInclude \
     -I$(LIB_SRC)/errorEstimation/lnInclude
 
 EXE_LIBS = \

applications/utilities/errorEstimation/momentScalarError/Make/options

@@ -1,5 +1,5 @@
 EXE_INC = \
-	-I$(LIB_SRC)/finiteVolume/lnInclude \
+    -I$(LIB_SRC)/finiteVolume/lnInclude \
     -I$(LIB_SRC)/errorEstimation/lnInclude
 
 EXE_LIBS = \

applications/utilities/mesh/advanced/collapseEdges/collapseEdges.C

@@ -454,7 +454,7 @@ label simplifyFaces
 int main(int argc, char *argv[])
 {
     argList::noParallel();
-    argList::validOptions.insert("overwrite", "");
+    argList::addBoolOption("overwrite");
     argList::validArgs.append("edge length [m]");
     argList::validArgs.append("merge angle (degrees)");
 

applications/utilities/mesh/advanced/combinePatchFaces/combinePatchFaces.C

@@ -59,10 +59,6 @@ using namespace Foam;
 
 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
 
-// Sin of angle between two consecutive edges on a face. If sin(angle) larger
-// than this the face will be considered concave.
-const scalar defaultConcaveAngle = 30;
-
 
 // Same check as snapMesh
 void checkSnapMesh
@@ -433,9 +429,9 @@ label mergeEdges(const scalar minCos, polyMesh& mesh)
 int main(int argc, char *argv[])
 {
     argList::validArgs.append("feature angle [0..180]");
-    argList::validOptions.insert("concaveAngle", "[0..180]");
+    argList::addOption("concaveAngle", "[0..180]");
-    argList::validOptions.insert("snapMesh", "");
+    argList::addBoolOption("snapMesh");
-    argList::validOptions.insert("overwrite", "");
+    argList::addBoolOption("overwrite");
 
 #   include "setRootCase.H"
 #   include "createTime.H"
@@ -447,8 +443,9 @@ int main(int argc, char *argv[])
 
     scalar minCos = Foam::cos(degToRad(featureAngle));
 
-    scalar concaveAngle = defaultConcaveAngle;
+    // Sin of angle between two consecutive edges on a face.
-    args.optionReadIfPresent("concaveAngle", concaveAngle);
+    // If sin(angle) larger than this the face will be considered concave.
+    scalar concaveAngle = args.optionLookupOrDefault("concaveAngle", 30.0);
 
     scalar concaveSin = Foam::sin(degToRad(concaveAngle));
 
@@ -483,8 +480,8 @@ int main(int argc, char *argv[])
     // Merge points on straight edges and remove unused points
     if (snapMeshDict)
     {
-        Info<< "Merging all 'loose' points on surface edges"
+        Info<< "Merging all 'loose' points on surface edges, "
-            << ", regardless of the angle they make." << endl;
+            << "regardless of the angle they make." << endl;
 
         // Surface bnound to be used to extrude. Merge all loose points.
         nChanged += mergeEdges(-1, mesh);
@@ -510,7 +507,7 @@ int main(int argc, char *argv[])
         Info<< "Mesh unchanged." << endl;
     }
 
-    Info<< "End\n" << endl;
+    Info<< "\nEnd\n" << endl;
 
     return 0;
 }

applications/utilities/mesh/advanced/modifyMesh/cellSplitter.C

@@ -22,8 +22,6 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
-Description
-
 \*---------------------------------------------------------------------------*/
 
 #include "cellSplitter.H"
@@ -39,12 +37,8 @@ Description
 
 // * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
 
-namespace Foam
+defineTypeNameAndDebug(Foam::cellSplitter, 0);
-{
 
-defineTypeNameAndDebug(cellSplitter, 0);
-
-}
 
 // * * * * * * * * * * * * * Private Member Functions  * * * * * * * * * * * //
 

applications/utilities/mesh/advanced/modifyMesh/modifyMesh.C

@@ -328,7 +328,7 @@ label findCell(const primitiveMesh& mesh, const point& nearPoint)
 
 int main(int argc, char *argv[])
 {
-    argList::validOptions.insert("overwrite", "");
+    argList::addBoolOption("overwrite");
 
 #   include "setRootCase.H"
 #   include "createTime.H"

applications/utilities/mesh/advanced/refineHexMesh/refineHexMesh.C

@@ -52,7 +52,7 @@ using namespace Foam;
 // Main program:
 int main(int argc, char *argv[])
 {
-    argList::validOptions.insert("overwrite", "");
+    argList::addBoolOption("overwrite");
     argList::validArgs.append("cellSet");
 #   include "setRootCase.H"
 #   include "createTime.H"

applications/utilities/mesh/advanced/refineWallLayer/refineWallLayer.C

@@ -47,11 +47,12 @@ using namespace Foam;
 
 int main(int argc, char *argv[])
 {
-    Foam::argList::noParallel();
+    argList::noParallel();
-    Foam::argList::validArgs.append("patchName");
+    argList::validArgs.append("patchName");
-    Foam::argList::validArgs.append("edgeWeight");
+    argList::validArgs.append("edgeWeight");
-    Foam::argList::validOptions.insert("useSet", "cellSet");
+
-    Foam::argList::validOptions.insert("overwrite", "");
+    argList::addOption("useSet", "cellSet");
+    argList::addBoolOption("overwrite");
 
 #   include "setRootCase.H"
 #   include "createTime.H"

applications/utilities/mesh/advanced/refinementLevel/refinementLevel.C

@@ -97,7 +97,7 @@ bool limitRefinementLevel
 
 int main(int argc, char *argv[])
 {
-    argList::validOptions.insert("readLevel", "");
+    argList::addBoolOption("readLevel");
 
 #   include "setRootCase.H"
 #   include "createTime.H"
@@ -216,7 +216,7 @@ int main(int argc, char *argv[])
 
     List<polyPatch*> p(patches.size());
 
-    forAll (p, patchI)
+    forAll(p, patchI)
     {
         p[patchI] = patches[patchI].clone(fMesh.boundaryMesh()).ptr();
     }

applications/utilities/mesh/advanced/removeFaces/removeFaces.C

@@ -48,8 +48,8 @@ using namespace Foam;
 
 int main(int argc, char *argv[])
 {
-    Foam::argList::validOptions.insert("overwrite", "");
+    argList::addBoolOption("overwrite");
-    Foam::argList::validArgs.append("faceSet");
+    argList::validArgs.append("faceSet");
 
 #   include "setRootCase.H"
 #   include "createTime.H"

applications/utilities/mesh/advanced/selectCells/edgeStats.H

@@ -67,7 +67,7 @@ class edgeStats
 
         //- If 2d get component of normal dir.
         direction getNormalDir(const twoDPointCorrector*) const;
-        
+
 
         //- Disallow default bitwise copy construct
         edgeStats(const edgeStats&);

applications/utilities/mesh/advanced/splitCells/splitCells.C

@@ -525,10 +525,10 @@ void collectCuts
 int main(int argc, char *argv[])
 {
     argList::noParallel();
-    argList::validOptions.insert("set", "cellSet name");
+    argList::addOption("set", "cellSet name");
-    argList::validOptions.insert("geometry", "");
+    argList::addBoolOption("geometry");
-    argList::validOptions.insert("tol", "edge snap tolerance");
+    argList::addOption("tol", "edge snap tolerance");
-    argList::validOptions.insert("overwrite", "");
+    argList::addBoolOption("overwrite");
     argList::validArgs.append("edge angle [0..360]");
 
 #   include "setRootCase.H"
@@ -546,8 +546,7 @@ int main(int argc, char *argv[])
     bool geometry  = args.optionFound("geometry");
     bool overwrite = args.optionFound("overwrite");
 
-    scalar edgeTol = 0.2;
+    scalar edgeTol = args.optionLookupOrDefault("tol", 0.2);
-    args.optionReadIfPresent("tol", edgeTol);
 
     Info<< "Trying to split cells with internal angles > feature angle\n" << nl
         << "featureAngle      : " << featureAngle << nl

applications/utilities/mesh/conversion/Optional/ccm26ToFoam/ccm26ToFoam.C

@@ -198,8 +198,11 @@ void ReadVertices
     int dims = 1;
     float scale;
     CCMIOID mapID;
-    CCMIOReadVerticesf(&err, vertices, &dims, &scale, &mapID, verts.begin(),
+    CCMIOReadVerticesf
-		       offset, offsetPlusSize);
+    (
+        &err, vertices, &dims, &scale, &mapID, verts.begin(),
+        offset, offsetPlusSize
+    );
     CCMIOReadMap(&err, mapID, mapData.begin(), offset, offsetPlusSize);
 
     //CCMIOSize size;
@@ -245,35 +248,34 @@ void ReadProblem
      == kCCMIONoErr
     )
     {
-	char *name;
+        char *name;
-	int size;
+        int size;
         int cellType;
 
-	// ... if it has a material type.  (Note that we do not pass in
+        // ... if it has a material type.  (Note that we do not pass in
-	// an array to get the name because we do not know how long the
+        // an array to get the name because we do not know how long the
-	// string is yet.  Many parameters to CCMIO functions that
+        // string is yet.  Many parameters to CCMIO functions that
         // return
-	// data can be NULL if that data is not needed.)
+        // data can be NULL if that data is not needed.)
-	if
+        if
         (
             CCMIOReadOptstr(NULL, next, "MaterialType", &size, NULL)
          == kCCMIONoErr
         )
-	{
+        {
-	    name = new char[size + 1];
+            name = new char[size + 1];
-	    CCMIOReadOptstr(&err, next, "MaterialType", &size, name);
+            CCMIOReadOptstr(&err, next, "MaterialType", &size, name);
-	    CCMIOGetEntityIndex(&err, next, &cellType);
+            CCMIOGetEntityIndex(&err, next, &cellType);
 
             foamCellTypeNames.insert(cellType, name);
             Pout<< "Celltype:" << cellType << " name:" << name << endl;
 
-	    delete [] name;
+            delete [] name;
-	}
+        }
     }
 
     // ... walk through each region description and print it...
 
-    
     CCMIOID boundary;
     label regionI = 0;
     int k = 0;
@@ -320,13 +322,13 @@ void ReadProblem
                 CCMIOReadOptstr(NULL, boundary, "BoundaryType", &size, NULL)
              == kCCMIONoErr
             )
-	    {
+            {
-	        char* s = new char[size + 1];
+                char* s = new char[size + 1];
-	        CCMIOReadOptstr(NULL, boundary, "BoundaryType", &size, s);
+                CCMIOReadOptstr(NULL, boundary, "BoundaryType", &size, s);
                 s[size] = '\0';
                 foamPatchTypes[foamPatchI] = string::validate<word>(string(s));
-	        delete [] s;
+                delete [] s;
-	    }
+            }
 
 
             //foamPatchMap.append(prostarI);
@@ -342,28 +344,28 @@ void ReadProblem
                 CCMIOReadOptstr(NULL, boundary, "BoundaryName", &size, NULL)
              == kCCMIONoErr
             )
-	    {
+            {
-	        char* name = new char[size + 1];
+                char* name = new char[size + 1];
-	        CCMIOReadOptstr(NULL, boundary, "BoundaryName", &size, name);
+                CCMIOReadOptstr(NULL, boundary, "BoundaryName", &size, name);
                 name[size] = '\0';
                 foamPatchNames[foamPatchI] = string::validate<word>(string(name));
-	        delete [] name;
+                delete [] name;
-	    }
+            }
             else if
             (
                 CCMIOReadOptstr(NULL, boundary, "Label", &size, NULL)
              == kCCMIONoErr
             )
-	    {
+            {
-	        char* name = new char[size + 1];
+                char* name = new char[size + 1];
-	        CCMIOReadOptstr(NULL, boundary, "Label", &size, name);
+                CCMIOReadOptstr(NULL, boundary, "Label", &size, name);
                 name[size] = '\0';
                 foamPatchNames[foamPatchI] = string::validate<word>(string(name));
-	        delete [] name;
+                delete [] name;
-	    }
+            }
             else
             {
-                foamPatchNames[foamPatchI] = 
+                foamPatchNames[foamPatchI] =
                     foamPatchTypes[foamPatchI]
                   + Foam::name(foamPatchI);
                 Pout<< "Made up name:" << foamPatchNames[foamPatchI]
@@ -440,8 +442,8 @@ void ReadCells
      == kCCMIONoErr
     )
     {
-	CCMIOSize size;
+        CCMIOSize size;
-	CCMIOEntitySize(&err, id, &size, NULL);
+        CCMIOEntitySize(&err, id, &size, NULL);
 
         Pout<< "Read kCCMIOBoundaryFaces entry with " << size
             << " faces." << endl;
@@ -461,13 +463,13 @@ void ReadCells
     CCMIOGetEntity(&err, topology, kCCMIOInternalFaces, 0, &id);
     CCMIOSize size;
     CCMIOReadFaces(&err, id, kCCMIOInternalFaces, NULL, &size, NULL,
-		   kCCMIOStart, kCCMIOEnd);
+                   kCCMIOStart, kCCMIOEnd);
     std::vector<int> faces(size);
     CCMIOReadFaces(&err, id, kCCMIOInternalFaces, &mapID, NULL, &faces[0],
-		   kCCMIOStart, kCCMIOEnd);
+                   kCCMIOStart, kCCMIOEnd);
     std::vector<int> faceCells(2*nInternalFaces);
     CCMIOReadFaceCells(&err, id, kCCMIOInternalFaces, &faceCells[0],
-		       kCCMIOStart, kCCMIOEnd);
+                       kCCMIOStart, kCCMIOEnd);
     CCMIOReadMap(&err, mapID, &mapData[0], kCCMIOStart, kCCMIOEnd);
     CheckError(err, "Error reading internal faces");
 
@@ -505,19 +507,19 @@ void ReadCells
     )
     {
         CCMIOSize nFaces;
-	CCMIOEntitySize(&err, id, &nFaces, NULL);
+        CCMIOEntitySize(&err, id, &nFaces, NULL);
 
-	mapData.resize(nFaces);
+        mapData.resize(nFaces);
-	faceCells.resize(nFaces);
+        faceCells.resize(nFaces);
-	CCMIOReadFaces(&err, id, kCCMIOBoundaryFaces, NULL, &size, NULL,
+        CCMIOReadFaces(&err, id, kCCMIOBoundaryFaces, NULL, &size, NULL,
-		       kCCMIOStart, kCCMIOEnd);
+                       kCCMIOStart, kCCMIOEnd);
-	faces.resize(size);
+        faces.resize(size);
-	CCMIOReadFaces(&err, id, kCCMIOBoundaryFaces, &mapID, NULL, &faces[0],
+        CCMIOReadFaces(&err, id, kCCMIOBoundaryFaces, &mapID, NULL, &faces[0],
-		       kCCMIOStart, kCCMIOEnd);
+                       kCCMIOStart, kCCMIOEnd);
-	CCMIOReadFaceCells(&err, id, kCCMIOBoundaryFaces, &faceCells[0],
+        CCMIOReadFaceCells(&err, id, kCCMIOBoundaryFaces, &faceCells[0],
-			   kCCMIOStart, kCCMIOEnd);
+                           kCCMIOStart, kCCMIOEnd);
-	CCMIOReadMap(&err, mapID, &mapData[0], kCCMIOStart, kCCMIOEnd);
+        CCMIOReadMap(&err, mapID, &mapData[0], kCCMIOStart, kCCMIOEnd);
-	CheckError(err, "Error reading boundary faces");
+        CheckError(err, "Error reading boundary faces");
 
         // Read prostar id
         int prostarI;
@@ -672,9 +674,9 @@ int main(int argc, char *argv[])
 
         if (err != kCCMIONoErr)
         {
-	    // Maybe no solution;  try again
+            // Maybe no solution;  try again
-	    err = kCCMIONoErr;
+            err = kCCMIONoErr;
-	    CCMIOReadProcessor
+            CCMIOReadProcessor
             (
                 &err,
                 processor,
@@ -683,12 +685,12 @@ int main(int argc, char *argv[])
                 NULL,
                 NULL
             );
-	    if (err != kCCMIONoErr)
+            if (err != kCCMIONoErr)
-	    {
+            {
-	        FatalErrorIn(args.executable())
+                FatalErrorIn(args.executable())
                     << "Could not read the file."
                     << exit(FatalError);
-	    }
+            }
         }
 
         ReadVertices(err, vertices, foamPointMap, foamPoints);

applications/utilities/mesh/conversion/ansysToFoam/ansysToFoam.L

@@ -238,7 +238,7 @@ int main(int argc, char *argv[])
 {
     argList::noParallel();
     argList::validArgs.append("ANSYS input file");
-    argList::validOptions.insert("scale", "scale factor");
+    argList::addOption("scale", "scale factor");
 
     argList args(argc, argv);
 

applications/utilities/mesh/conversion/cfx4ToFoam/block.C

@@ -22,13 +22,9 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
-Description
-
-
 \*---------------------------------------------------------------------------*/
 
 #include "error.H"
-
 #include "block.H"
 
 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

applications/utilities/mesh/conversion/cfx4ToFoam/cfx4ToFoam.C

@@ -50,7 +50,7 @@ int main(int argc, char *argv[])
 {
     argList::noParallel();
     argList::validArgs.append("CFX geom file");
-    argList::validOptions.insert("scale", "scale factor");
+    argList::addOption("scale", "scale factor");
 
     argList args(argc, argv);
 
@@ -81,7 +81,7 @@ int main(int argc, char *argv[])
         word blockName;
         label nx, ny, nz;
 
-        forAll (blocks, blockI)
+        forAll(blocks, blockI)
         {
             cfxFile >> blockName;
             cfxFile >> nx >> ny >> nz;
@@ -101,7 +101,7 @@ int main(int argc, char *argv[])
     {
         label no, blkNo, patchLabel;
 
-        forAll (cfxPatchTypes, patchI)
+        forAll(cfxPatchTypes, patchI)
         {
             // Grab patch type and name
             cfxFile >> cfxPatchTypes[patchI] >> cfxPatchNames[patchI] >> no;
@@ -110,7 +110,7 @@ int main(int argc, char *argv[])
             patchRanges[patchI].setSize(6);
             labelList& curRange = patchRanges[patchI];
 
-            forAll (curRange, rI)
+            forAll(curRange, rI)
             {
                 cfxFile >> curRange[rI];
             }
@@ -147,7 +147,7 @@ int main(int argc, char *argv[])
 
     Info<< "Reading block points" << endl;
 
-    forAll (blocks, blockI)
+    forAll(blocks, blockI)
     {
         Info<< "block " << blockI << " is a ";
         blocks[blockI].readPoints(cfxFile);
@@ -176,7 +176,7 @@ int main(int argc, char *argv[])
 
     faceListList rawPatches(npatch);
 
-    forAll (rawPatches, patchI)
+    forAll(rawPatches, patchI)
     {
         const word& patchType = cfxPatchTypes[patchI];
 
@@ -214,7 +214,7 @@ int main(int argc, char *argv[])
     // For efficiency, create merge pairs in the first pass
     labelListListList glueMergePairs(glueMasterPatches.size());
 
-    forAll (glueMasterPatches, glueI)
+    forAll(glueMasterPatches, glueI)
     {
         const label masterPatch = glueMasterPatches[glueI];
         const label slavePatch = glueSlavePatches[glueI];
@@ -247,14 +247,14 @@ int main(int argc, char *argv[])
 
         scalar sqrMergeTol = GREAT;
 
-        forAll (blockPFaces, blockPFaceLabel)
+        forAll(blockPFaces, blockPFaceLabel)
         {
             const labelList& blockPFacePoints =
                 blockPFaces[blockPFaceLabel];
 
-            forAll (blockPFacePoints, blockPFacePointI)
+            forAll(blockPFacePoints, blockPFacePointI)
             {
-                forAll (blockPFacePoints, blockPFacePointI2)
+                forAll(blockPFacePoints, blockPFacePointI2)
                 {
                     if (blockPFacePointI != blockPFacePointI2)
                     {
@@ -281,7 +281,7 @@ int main(int argc, char *argv[])
 
         // N-squared point search over all points of all faces of
         // master block over all point of all faces of slave block
-        forAll (blockPFaces, blockPFaceLabel)
+        forAll(blockPFaces, blockPFaceLabel)
         {
             const labelList& blockPFacePoints =
                 blockPFaces[blockPFaceLabel];
@@ -289,16 +289,16 @@ int main(int argc, char *argv[])
             labelList& cp = curPairs[blockPFaceLabel];
             cp.setSize(blockPFacePoints.size());
 
-        forAll (blockPFacePoints, blockPFacePointI)
+        forAll(blockPFacePoints, blockPFacePointI)
         {
             found = false;
 
-            forAll (blockNFaces, blockNFaceLabel)
+            forAll(blockNFaces, blockNFaceLabel)
             {
                 const labelList& blockNFacePoints =
                     blockNFaces[blockNFaceLabel];
 
-            forAll (blockNFacePoints, blockNFacePointI)
+            forAll(blockNFacePoints, blockNFacePointI)
             {
                 if
                 (
@@ -360,7 +360,7 @@ int main(int argc, char *argv[])
         changedPointMerge = false;
         nPasses++;
 
-        forAll (glueMasterPatches, glueI)
+        forAll(glueMasterPatches, glueI)
         {
             const label masterPatch = glueMasterPatches[glueI];
             const label slavePatch = glueSlavePatches[glueI];
@@ -372,14 +372,14 @@ int main(int argc, char *argv[])
 
             const labelListList& curPairs = glueMergePairs[glueI];
 
-            forAll (blockPFaces, blockPFaceLabel)
+            forAll(blockPFaces, blockPFaceLabel)
             {
                 const labelList& blockPFacePoints =
                     blockPFaces[blockPFaceLabel];
 
                 const labelList& cp = curPairs[blockPFaceLabel];
 
-                forAll (cp, blockPFacePointI)
+                forAll(cp, blockPFacePointI)
                 {
                     label PpointLabel =
                         blockPFacePoints[blockPFacePointI]
@@ -421,7 +421,7 @@ int main(int argc, char *argv[])
     }
 
 
-    forAll (glueMasterPatches, glueI)
+    forAll(glueMasterPatches, glueI)
     {
         const label masterPatch = glueMasterPatches[glueI];
         const label slavePatch = glueSlavePatches[glueI];
@@ -433,12 +433,12 @@ int main(int argc, char *argv[])
         const faceList& blockNFaces = rawPatches[slavePatch];
 
 
-        forAll (blockPFaces, blockPFaceLabel)
+        forAll(blockPFaces, blockPFaceLabel)
         {
             const labelList& blockPFacePoints
                 = blockPFaces[blockPFaceLabel];
 
-            forAll (blockPFacePoints, blockPFacePointI)
+            forAll(blockPFacePoints, blockPFacePointI)
             {
                 label PpointLabel =
                     blockPFacePoints[blockPFacePointI]
@@ -455,12 +455,12 @@ int main(int argc, char *argv[])
             }
         }
 
-        forAll (blockNFaces, blockNFaceLabel)
+        forAll(blockNFaces, blockNFaceLabel)
         {
             const labelList& blockNFacePoints
                 = blockNFaces[blockNFaceLabel];
 
-            forAll (blockNFacePoints, blockNFacePointI)
+            forAll(blockNFacePoints, blockNFacePointI)
             {
                 label NpointLabel =
                     blockNFacePoints[blockNFacePointI]
@@ -483,7 +483,7 @@ int main(int argc, char *argv[])
     // given old point label
     label nNewPoints = 0;
 
-    forAll (pointMergeList, pointLabel)
+    forAll(pointMergeList, pointLabel)
     {
         if (pointMergeList[pointLabel] > pointLabel)
         {
@@ -513,11 +513,11 @@ int main(int argc, char *argv[])
 
     pointField points(nMeshPoints);
 
-    forAll (blocks, blockI)
+    forAll(blocks, blockI)
     {
         const pointField& blockPoints = blocks[blockI].points();
 
-        forAll (blockPoints, blockPointLabel)
+        forAll(blockPoints, blockPointLabel)
         {
             points
             [
@@ -544,15 +544,15 @@ int main(int argc, char *argv[])
 
     label nCreatedCells = 0;
 
-    forAll (blocks, blockI)
+    forAll(blocks, blockI)
     {
         labelListList curBlockCells = blocks[blockI].blockCells();
 
-        forAll (curBlockCells, blockCellI)
+        forAll(curBlockCells, blockCellI)
         {
             labelList cellPoints(curBlockCells[blockCellI].size());
 
-            forAll (cellPoints, pointI)
+            forAll(cellPoints, pointI)
             {
                 cellPoints[pointI] =
                     pointMergeList
@@ -579,7 +579,7 @@ int main(int argc, char *argv[])
 
     label nCreatedPatches = 0;
 
-    forAll (rawPatches, patchI)
+    forAll(rawPatches, patchI)
     {
         if (rawPatches[patchI].size() && cfxPatchTypes[patchI] != "BLKBDY")
         {
@@ -610,14 +610,14 @@ int main(int argc, char *argv[])
                 label oldSize = renumberedPatch.size();
                 renumberedPatch.setSize(oldSize + curRawPatch.size());
 
-                forAll (curRawPatch, faceI)
+                forAll(curRawPatch, faceI)
                 {
                     const face& oldFace = curRawPatch[faceI];
 
                     face& newFace = renumberedPatch[oldSize + faceI];
                     newFace.setSize(oldFace.size());
 
-                    forAll (oldFace, pointI)
+                    forAll(oldFace, pointI)
                     {
                         newFace[pointI] =
                             pointMergeList
@@ -634,14 +634,14 @@ int main(int argc, char *argv[])
                 faceList& renumberedPatch = boundary[nCreatedPatches];
                 renumberedPatch.setSize(curRawPatch.size());
 
-                forAll (curRawPatch, faceI)
+                forAll(curRawPatch, faceI)
                 {
                     const face& oldFace = curRawPatch[faceI];
 
                     face& newFace = renumberedPatch[faceI];
                     newFace.setSize(oldFace.size());
 
-                    forAll (oldFace, pointI)
+                    forAll(oldFace, pointI)
                     {
                         newFace[pointI] =
                             pointMergeList

applications/utilities/mesh/conversion/cfx4ToFoam/hexBlock.C

@@ -22,8 +22,6 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
-Description
-
 \*---------------------------------------------------------------------------*/
 
 #include "hexBlock.H"
@@ -58,7 +56,7 @@ hexBlock::hexBlock(const label nx, const label ny, const label nz)
 
 void hexBlock::readPoints(Istream& is)
 {
-    forAll (points_, i)
+    forAll(points_, i)
     {
         is >> points_[i].x() >> points_[i].y() >> points_[i].z();
     }
@@ -376,7 +374,7 @@ faceList hexBlock::patchFaces(const label direc, const labelList& range) const
     else if (blockHandedness_ == left)
     {
         // turn all faces inside out
-        forAll (result, faceI)
+        forAll(result, faceI)
         {
             result[faceI] = result[faceI].reverseFace();
         }

applications/utilities/mesh/conversion/fluent3DMeshToFoam/fluent3DMeshToFoam.L

@@ -473,7 +473,7 @@ endOfSection               {space}")"{space}
         // set size of label list
         curFaceLabels.setSize(strtol(YYText(), &endPtr, 16));
 
-        forAll (curFaceLabels, i)
+        forAll(curFaceLabels, i)
         {
             curFaceLabels[i] = strtol(endPtr, &endPtr, 16) - 1;
         }
@@ -762,10 +762,10 @@ int main(int argc, char *argv[])
 {
     argList::noParallel();
     argList::validArgs.append("Fluent mesh file");
-    argList::validOptions.insert("scale", "scale factor");
+    argList::addOption("scale", "scale factor");
-    argList::validOptions.insert("ignoreCellGroups", "cell group names");
+    argList::addOption("ignoreCellGroups", "cell group names");
-    argList::validOptions.insert("ignoreFaceGroups", "face group names");
+    argList::addOption("ignoreFaceGroups", "face group names");
-    argList::validOptions.insert("cubit", "");
+    argList::addBoolOption("cubit");
 
     argList args(argc, argv);
 
@@ -776,17 +776,11 @@ int main(int argc, char *argv[])
 
     args.optionReadIfPresent("scale", scaleFactor);
 
-    HashSet<word> ignoreCellGroups;
+    wordHashSet ignoreCellGroups;
-    if (args.optionFound("ignoreCellGroups"))
+    wordHashSet ignoreFaceGroups;
-    {
-        args.optionLookup("ignoreCellGroups")() >> ignoreCellGroups;
-    }
 
-    HashSet<word> ignoreFaceGroups;
+    args.optionReadIfPresent("ignoreCellGroups", ignoreCellGroups);
-    if (args.optionFound("ignoreFaceGroups"))
+    args.optionReadIfPresent("ignoreFaceGroups", ignoreFaceGroups);
-    {
-        args.optionLookup("ignoreFaceGroups")() >> ignoreFaceGroups;
-    }
 
     cubitFile = args.options().found("cubit");
 
@@ -843,7 +837,7 @@ int main(int argc, char *argv[])
     // faces and move to neighbour
 
     boolList fm(faces.size(), false);
-    forAll (faces, facei)
+    forAll(faces, facei)
     {
         if
         (

applications/utilities/mesh/conversion/fluentMeshToFoam/README.txt

@@ -2,35 +2,35 @@ Notes for fluentMeshToFoam with zone preservation
 #################################################
 
 1. New option added:
-    - writeSets: 
+    - writeSets:
     Writes all Fluent boundaries faceSets preserving Fluent names
     Writes all Fluent regions to cellSets preserving Fluent names
     lines: 1375 - 1393 & 1673 - 1741
     sets are useful for post-processing using foamToVTK with the "-faceSet
     <name>" and "-cellSet <name>" options.
-    
+
-    - writeZones: 
+    - writeZones:
     Writes all regions to cellZones preserving Fluent names
-    Writes all region internal face to faceZones preserving Fluent names 
+    Writes all region internal face to faceZones preserving Fluent names
     lines: 1545 - 1667
     Zones are usefull for porous media and MRF calculations
 
 2. Zone Access
-    - Zones are simple lists of label lists that can be accessed from polyMesh 
+    - Zones are simple lists of label lists that can be accessed from polyMesh
     with the cellZones(), faceZones() and pointZones() member functions
 
     - Example (Members from polyMesh.H and ZoneMesh.H):
     label thisCellZoneID = mesh.cellZones().findZoneID("thisZoneName");
     const labelList& thisCellZone = mesh.cellZones()[thisCellZoneID];
-    
+
     - Zone integrity is preserved during mesh modification and decompomposition.
-    
+
-    - Once created via addZones, zones allow modification through non-const 
+    - Once created via addZones, zones allow modification through non-const
     access
 
 3. Fluent boundary types.
     - All internal and baffle elements are ignored during conversion
-    
+
     - Boundary faces labelled as internal (i.e. interior, interface, internal,
     solid, fan, radiator, porous-jump) but that are in fact external boundaries
     will be added to a default wall boundary.

applications/utilities/mesh/conversion/fluentMeshToFoam/create3DCellShape.C

@@ -155,7 +155,7 @@ cellShape create3DCellShape
 
     bool found = false;
 
-    forAll (localFaces, meshFaceI)
+    forAll(localFaces, meshFaceI)
     {
         if (localFaces[meshFaceI].size() == firstModelFace.size())
         {
@@ -166,7 +166,7 @@ cellShape create3DCellShape
 
             meshFaceUsed[meshFaceI] = true;
 
-            forAll (curMeshFace, pointI)
+            forAll(curMeshFace, pointI)
             {
                 pointLabels[firstModelFace[pointI]] = curMeshFace[pointI];
             }
@@ -199,7 +199,7 @@ cellShape create3DCellShape
         found = false;
 
         // Loop through mesh faces until a match is found
-        forAll (localFaces, meshFaceI)
+        forAll(localFaces, meshFaceI)
         {
             if
             (
@@ -220,7 +220,7 @@ cellShape create3DCellShape
                     // try matching the face
                     label nMatchedLabels = 0;
 
-                    forAll (meshFaceLabels, pointI)
+                    forAll(meshFaceLabels, pointI)
                     {
                         if
                         (
@@ -241,7 +241,7 @@ cellShape create3DCellShape
                     if (found)
                     {
                         // match found. Insert mesh face
-                        forAll (meshFaceLabels, pointI)
+                        forAll(meshFaceLabels, pointI)
                         {
                             pointLabels[curModelFace[pointI]] =
                                 meshFaceLabels[pointI];

applications/utilities/mesh/conversion/fluentMeshToFoam/extrudedQuadCellShape.C

@@ -73,7 +73,7 @@ cellShape extrudedQuadCellShape
     // make a list of outward-pointing faces
     labelListList localFaces(4);
 
-    forAll (faceLabels, faceI)
+    forAll(faceLabels, faceI)
     {
         const label curFaceLabel = faceLabels[faceI];
 
@@ -100,7 +100,7 @@ cellShape extrudedQuadCellShape
         {
             // Reverse the face.  Note: it is necessary to reverse by
             // hand to preserve connectivity of a 2-D mesh.
-            // 
+            //
             localFaces[faceI].setSize(curFace.size());
 
             forAllReverse(curFace, i)

applications/utilities/mesh/conversion/fluentMeshToFoam/extrudedTriangleCellShape.C

@@ -75,7 +75,7 @@ cellShape extrudedTriangleCellShape
     // make a list of outward-pointing faces
     labelListList localFaces(3);
 
-    forAll (faceLabels, faceI)
+    forAll(faceLabels, faceI)
     {
         const label curFaceLabel = faceLabels[faceI];
 
@@ -102,7 +102,7 @@ cellShape extrudedTriangleCellShape
         {
             // Reverse the face.  Note: it is necessary to reverse by
             // hand to preserve connectivity of a 2-D mesh.
-            // 
+            //
             localFaces[faceI].setSize(curFace.size());
 
             forAllReverse(curFace, i)

applications/utilities/mesh/conversion/fluentMeshToFoam/fluentMeshToFoam.L

@@ -490,7 +490,7 @@ endOfSection               {space}")"{space}
         // set size of label list
         curFaceLabels.setSize(readLabel(mixedFaceStream));
 
-        forAll (curFaceLabels, i)
+        forAll(curFaceLabels, i)
         {
             curFaceLabels[i] = readHexLabel(mixedFaceStream) - 1;
         }
@@ -511,7 +511,7 @@ endOfSection               {space}")"{space}
         // for edge is 2, for triangle is 3 and for quad is 4
         curFaceLabels.setSize(faceGroupElementType);
 
-        forAll (curFaceLabels, i)
+        forAll(curFaceLabels, i)
         {
             curFaceLabels[i] = readHexLabel(mixedFaceStream) - 1;
         }
@@ -867,9 +867,9 @@ int main(int argc, char *argv[])
 {
     argList::noParallel();
     argList::validArgs.append("Fluent mesh file");
-    argList::validOptions.insert("scale", "scale factor");
+    argList::addOption("scale", "scale factor");
-    argList::validOptions.insert("writeSets", "");
+    argList::addBoolOption("writeSets");
-    argList::validOptions.insert("writeZones", "");
+    argList::addBoolOption("writeZones");
 
     argList args(argc, argv);
 
@@ -915,14 +915,14 @@ int main(int argc, char *argv[])
 
     labelList nFacesInCell(nCells, 0);
 
-    forAll (cellFaces, celli)
+    forAll(cellFaces, celli)
     {
         cellFaces[celli].setSize(fluentModelNFaces[fluentCellModelID[celli] ]);
     }
 
     // fill in owner and neighbour
 
-    forAll (owner, faceI)
+    forAll(owner, faceI)
     {
         if (owner[faceI] > -1)
         {
@@ -933,7 +933,7 @@ int main(int argc, char *argv[])
         }
     }
 
-    forAll (neighbour, faceI)
+    forAll(neighbour, faceI)
     {
         if (neighbour[faceI] > -1)
         {
@@ -976,7 +976,7 @@ int main(int argc, char *argv[])
         // points given by Fluent need to represent the FRONT plane of the
         // geometry. Therefore, the extrusion will be in -z direction
         //
-        forAll (oldPoints, pointI)
+        forAll(oldPoints, pointI)
         {
             points[nNewPoints] = oldPoints[pointI];
 
@@ -985,7 +985,7 @@ int main(int argc, char *argv[])
             nNewPoints++;
         }
 
-        forAll (oldPoints, pointI)
+        forAll(oldPoints, pointI)
         {
             points[nNewPoints] = oldPoints[pointI];
 
@@ -1000,7 +1000,7 @@ int main(int argc, char *argv[])
         // Set the number of empty faces
         frontAndBackFaces.setSize(2*nCells);
 
-        forAll (fluentCellModelID, celli)
+        forAll(fluentCellModelID, celli)
         {
             switch (fluentCellModelID[celli])
             {
@@ -1053,7 +1053,7 @@ int main(int argc, char *argv[])
         }
 
         // Create new faces
-        forAll (faces, faceI)
+        forAll(faces, faceI)
         {
 
             if (faces[faceI].size() != 2)
@@ -1078,7 +1078,7 @@ int main(int argc, char *argv[])
     {
         // 3-D shape recognition
         Info<< "Creating shapes for 3-D cells"<< endl;
-        forAll (fluentCellModelID, celli)
+        forAll(fluentCellModelID, celli)
         {
             if
             (
@@ -1116,7 +1116,7 @@ int main(int argc, char *argv[])
     // area vector points into the domain. Turn them round before making patches
     // for Foam compatibility
 
-    forAll (faces, faceI)
+    forAll(faces, faceI)
     {
         if (owner[faceI] == -1)
         {
@@ -1232,7 +1232,7 @@ int main(int argc, char *argv[])
 
         faceList patchFaces(faceGroupEndIndexIter() - faceLabel);
 
-        forAll (patchFaces, faceI)
+        forAll(patchFaces, faceI)
         {
             if
             (

applications/utilities/mesh/conversion/foamMeshToFluent/fluentFvMesh.C

@@ -113,7 +113,7 @@ void Foam::fluentFvMesh::writeFluentMesh() const
 
     const pointField& p = points();
 
-    forAll (p, pointI)
+    forAll(p, pointI)
     {
         fluentMeshFile
             << "    "
@@ -135,7 +135,7 @@ void Foam::fluentFvMesh::writeFluentMesh() const
         << "(13 (2 1 "
         << own.size() << " 2 0)" << std::endl << "(" << std::endl;
 
-    forAll (own, faceI)
+    forAll(own, faceI)
     {
         const labelList& l = fcs[faceI];
 
@@ -143,7 +143,7 @@ void Foam::fluentFvMesh::writeFluentMesh() const
 
         fluentMeshFile << l.size() << " ";
 
-        forAll (l, lI)
+        forAll(l, lI)
         {
             fluentMeshFile << l[lI] + 1 << " ";
         }
@@ -157,7 +157,7 @@ void Foam::fluentFvMesh::writeFluentMesh() const
     label nWrittenFaces = own.size();
 
     // Writing boundary faces
-    forAll (boundary(), patchI)
+    forAll(boundary(), patchI)
     {
         const unallocFaceList& patchFaces = boundaryMesh()[patchI];
 
@@ -190,7 +190,7 @@ void Foam::fluentFvMesh::writeFluentMesh() const
         fluentMeshFile
             <<" 0)" << std::endl << "(" << std::endl;
 
-        forAll (patchFaces, faceI)
+        forAll(patchFaces, faceI)
         {
             const labelList& l = patchFaces[faceI];
 
@@ -225,7 +225,7 @@ void Foam::fluentFvMesh::writeFluentMesh() const
 
     bool hasWarned = false;
 
-    forAll (cells, cellI)
+    forAll(cells, cellI)
     {
         if (cells[cellI].model() == tet)
         {
@@ -270,7 +270,7 @@ void Foam::fluentFvMesh::writeFluentMesh() const
     fluentMeshFile << "(39 (2 interior interior-1)())" << std::endl;
 
     // Writing boundary patch types
-    forAll (boundary(), patchI)
+    forAll(boundary(), patchI)
     {
         fluentMeshFile
             << "(39 (" << patchI + 10 << " ";

applications/utilities/mesh/conversion/foamToStarMesh/foamToStarMesh.C

@@ -76,10 +76,27 @@ int main(int argc, char *argv[])
     argList::noParallel();
     timeSelector::addOptions();
 
-    argList::validOptions.insert("scale", "scale");
+    argList::addOption
-    argList::validOptions.insert("noBnd", "");
+    (
-    argList::validOptions.insert("tri", "");
+        "scale",
-    argList::validOptions.insert("surface", "");
+        "factor",
+        "specify geometry scaling factor - default is 1000 ([m] to [mm])"
+    );
+    argList::addBoolOption
+    (
+        "noBnd",
+        "suppress writing the .bnd file"
+    );
+    argList::addBoolOption
+    (
+        "tri",
+        "Extract a triangulated surface. Implies -surface"
+    );
+    argList::addBoolOption
+    (
+        "surface",
+        "extract the surface of the volume mesh only"
+    );
 
 #   include "setRootCase.H"
 #   include "createTime.H"

applications/utilities/mesh/conversion/gambitToFoam/gambitToFoam.L

@@ -583,7 +583,7 @@ mtype                 {space}"MTYPE:"{space}
         {
             scalarList patchFaceValues(nValuesForPatchFaces);
 
-            forAll (patchFaceValues, fI)
+            forAll(patchFaceValues, fI)
             {
                 patchFaceValues[fI] = readScalar(patchFacesStream);
             }
@@ -639,7 +639,7 @@ int main(int argc, char *argv[])
 {
     argList::noParallel();
     argList::validArgs.append("GAMBIT file");
-    argList::validOptions.insert("scale", "scale factor");
+    argList::addOption("scale", "scale factor");
 
     argList args(argc, argv);
 
@@ -673,7 +673,7 @@ int main(int argc, char *argv[])
     // make a point mapping array
     label maxPointIndex = 0;
 
-    forAll (pointMap, pointI)
+    forAll(pointMap, pointI)
     {
         if (pointMap[pointI] > maxPointIndex)
         {
@@ -684,7 +684,7 @@ int main(int argc, char *argv[])
 
     labelList pointLookup(maxPointIndex + 1, -1);
 
-    forAll (pointMap, pointI)
+    forAll(pointMap, pointI)
     {
         pointLookup[pointMap[pointI] ] = pointI;
     }
@@ -692,7 +692,7 @@ int main(int argc, char *argv[])
     // make a cell mapping array
     label maxCellIndex = 0;
 
-    forAll (cellMap, cellI)
+    forAll(cellMap, cellI)
     {
         if (cellMap[cellI] > maxCellIndex)
         {
@@ -702,7 +702,7 @@ int main(int argc, char *argv[])
 
     labelList cellLookup(maxCellIndex + 1);
 
-    forAll (cellMap, cellI)
+    forAll(cellMap, cellI)
     {
         cellLookup[cellMap[cellI] ] = cellI;
     }
@@ -719,7 +719,7 @@ int main(int argc, char *argv[])
 
     cellShapeList cells(cellLabels.size());
 
-    forAll (cellTypes, cellI)
+    forAll(cellTypes, cellI)
     {
         const labelList& curCellLabels = cellLabels[cellI];
 
@@ -798,7 +798,7 @@ int main(int argc, char *argv[])
         faceList& patchFaces = boundary[patchI];
         patchFaces.setSize(curCells.size());
 
-        forAll (curCells, faceI)
+        forAll(curCells, faceI)
         {
             patchFaces[faceI] =
                 cells[cellLookup[curCells[faceI] ] ].faces()