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GIT: Initial state after latest Foundation merge

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This commit is contained in:
Andrew Heather
2016-09-20 14:49:08 +01:00
parent 4ea1613653 360ab50ed6
commit 9fbd612672
4571 changed files with 115696 additions and 74609 deletions
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29
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/Allwmake
View File

@ -2,7 +2,6 @@
cd ${0%/*} || exit 1 # Run from this directory
# Parse arguments for library compilation
targetType=libso
. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
# Source the wmake functions
@ -16,19 +15,23 @@ set -x
if [ -d "$ParaView_DIR" -a -r "$ParaView_DIR" ]
then
wmake $targetType vtkPVFoam
sourceDir=$PWD/PVFoamReader
# Where are any generated files stored?
findObjectDir $sourceDir
(
mkdir -p $objectsDir \
&& cd $objectsDir \
&& cmake $sourceDir \
&& make
) || {
echo
echo "WARNING: incomplete build of ParaView OpenFOAM plugin"
}
if [ "$targetType" != "objects" ]
then
sourceDir=$PWD/PVFoamReader
# Where are any generated files stored?
findObjectDir $sourceDir
(
mkdir -p $objectsDir \
&& cd $objectsDir \
&& cmake $sourceDir \
&& make
) || {
echo
echo "WARNING: incomplete build of ParaView OpenFOAM plugin"
}
fi
fi
#------------------------------------------------------------------------------

6
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/PVFoamReader/CMakeLists.txt
View File

@ -1,4 +1,4 @@
# create a plugin that adds a reader to the ParaView GUI
# Create a plugin that adds a reader to the ParaView GUI
# it is added in the file dialog when doing opens/saves.
# The qrc file is processed by Qt's resource compiler (rcc)
@ -61,7 +61,7 @@ IF(("${PARAVIEW_VERSION_MAJOR}" LESS 5) AND ("${PARAVIEW_VERSION_MINOR}" LESS 4)
SERVER_MANAGER_SOURCES vtkPVFoamReader.cxx
GUI_INTERFACES ${IFACES}
GUI_SOURCES pqPVFoamReaderPanel.cxx
${MOC_SRCS} ${UI_SRCS} ${IFACE_SRCS}
${MOC_SRCS} ${UI_SRCS} ${IFACE_SRCS}
GUI_RESOURCE_FILES PVFoamReader.xml
)
ELSE()
@ -71,7 +71,7 @@ ELSE()
SERVER_MANAGER_SOURCES vtkPVFoamReader.cxx
GUI_INTERFACES ${IFACES}
GUI_SOURCES pqPVFoamReaderPanel.cxx
${MOC_SRCS} ${UI_SRCS} ${IFACE_SRCS}
${MOC_SRCS} ${UI_SRCS} ${IFACE_SRCS}
)
ENDIF()

8
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/PVFoamReader/vtkPVFoamReader.cxx
View File

@ -58,10 +58,10 @@ vtkPVFoamReader::vtkPVFoamReader()
SetNumberOfInputPorts(0);
FileName = NULL;
foamData_ = NULL;
FileName = nullptr;
foamData_ = nullptr;
output0_ = NULL;
output0_ = nullptr;
#ifdef VTKPVFOAM_DUALPORT
// Add second output for the Lagrangian
@ -217,7 +217,7 @@ int vtkPVFoamReader::RequestInformation
// delete foamData and flag it as fatal error
delete foamData_;
foamData_ = NULL;
foamData_ = nullptr;
return 0;
}

3
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/Make/options
View File

@ -9,8 +9,7 @@ EXE_INC = \
-I../PVFoamReader
LIB_LIBS = \
-lmeshTools \
-lfiniteVolume \
-ldynamicMesh \
-ldynamicMesh \
-lgenericPatchFields \
-llagrangian \

12
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkOpenFOAMTupleRemap.H
View File

@ -30,7 +30,6 @@ InClass
#define vtkOpenFOAMTupleRemap_H
// OpenFOAM includes
#include "StaticAssert.H"
#include "Swap.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -39,17 +38,6 @@ template<class Type>
inline void vtkOpenFOAMTupleRemap(float vec[]);
// a symmTensor specialization to remap OpenFOAM -> ParaView naming order
// Qt/Core/pqScalarBarRepresentation.cxx defines this order
// { "XX", "YY", "ZZ", "XY", "YZ", "XZ" }
// in pqScalarBarRepresentation::getDefaultComponentLabel()
// whereas OpenFOAM uses this order
// { XX, XY, XZ, YY, YZ, ZZ }
//
// for extra safety, assert that symmTensor indeed has 6 components
StaticAssert(Foam::symmTensor::nComponents == 6);
// Template specialization for symmTensor
template<>
inline void vtkOpenFOAMTupleRemap<Foam::symmTensor>(float vec[])

58
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoam.C
View File

@ -86,7 +86,7 @@ void Foam::vtkPVFoam::reduceMemory()
if (!reader_->GetCacheMesh())
{
delete meshPtr_;
meshPtr_ = NULL;
meshPtr_ = nullptr;
}
}
@ -226,8 +226,8 @@ Foam::vtkPVFoam::vtkPVFoam
)
:
reader_(reader),
dbPtr_(NULL),
meshPtr_(NULL),
dbPtr_(nullptr),
meshPtr_(nullptr),
meshRegion_(polyMesh::defaultRegion),
meshDir_(polyMesh::meshSubDir),
timeIndex_(-1),
@ -347,7 +347,7 @@ void Foam::vtkPVFoam::updateInfo()
if (debug)
{
Info<< "<beg> Foam::vtkPVFoam::updateInfo"
<< " [meshPtr=" << (meshPtr_ ? "set" : "NULL") << "] timeIndex="
<< " [meshPtr=" << (meshPtr_ ? "set" : "nullptr") << "] timeIndex="
<< timeIndex_ << endl;
}
@ -426,7 +426,7 @@ void Foam::vtkPVFoam::updateFoamMesh()
if (!reader_->GetCacheMesh())
{
delete meshPtr_;
meshPtr_ = NULL;
meshPtr_ = nullptr;
}
// Check to see if the OpenFOAM mesh has been created
@ -551,7 +551,7 @@ void Foam::vtkPVFoam::CleanUp()
double* Foam::vtkPVFoam::findTimes(int& nTimeSteps)
{
int nTimes = 0;
double* tsteps = NULL;
double* tsteps = nullptr;
if (dbPtr_.valid())
{
@ -640,10 +640,10 @@ void Foam::vtkPVFoam::renderPatchNames
// always remove old actors first
forAll(patchTextActorsPtrs_, patchI)
forAll(patchTextActorsPtrs_, patchi)
{
renderer->RemoveViewProp(patchTextActorsPtrs_[patchI]);
patchTextActorsPtrs_[patchI]->Delete();
renderer->RemoveViewProp(patchTextActorsPtrs_[patchi]);
patchTextActorsPtrs_[patchi]->Delete();
}
patchTextActorsPtrs_.clear();
@ -673,9 +673,9 @@ void Foam::vtkPVFoam::renderPatchNames
// Loop through all patches to determine zones, and centre of each zone
forAll(pbMesh, patchI)
forAll(pbMesh, patchi)
{
const polyPatch& pp = pbMesh[patchI];
const polyPatch& pp = pbMesh[patchi];
// Only include the patch if it is selected
if (!selectedPatches.found(pp.name()))
@ -707,27 +707,27 @@ void Foam::vtkPVFoam::renderPatchNames
// Do topological analysis of patch, find disconnected regions
patchZones pZones(pp, featEdge);
nZones[patchI] = pZones.nZones();
nZones[patchi] = pZones.nZones();
labelList zoneNFaces(pZones.nZones(), 0);
// Create storage for additional zone centres
forAll(zoneNFaces, zoneI)
{
zoneCentre[patchI].append(Zero);
zoneCentre[patchi].append(Zero);
}
// Do averaging per individual zone
forAll(pp, faceI)
forAll(pp, facei)
{
label zoneI = pZones[faceI];
zoneCentre[patchI][zoneI] += pp[faceI].centre(pp.points());
label zoneI = pZones[facei];
zoneCentre[patchi][zoneI] += pp[facei].centre(pp.points());
zoneNFaces[zoneI]++;
}
forAll(zoneCentre[patchI], zoneI)
forAll(zoneCentre[patchi], zoneI)
{
zoneCentre[patchI][zoneI] /= zoneNFaces[zoneI];
zoneCentre[patchi][zoneI] /= zoneNFaces[zoneI];
}
}
@ -738,9 +738,9 @@ void Foam::vtkPVFoam::renderPatchNames
label displayZoneI = 0;
forAll(pbMesh, patchI)
forAll(pbMesh, patchi)
{
displayZoneI += min(MAXPATCHZONES, nZones[patchI]);
displayZoneI += min(MAXPATCHZONES, nZones[patchi]);
}
if (debug)
@ -760,18 +760,18 @@ void Foam::vtkPVFoam::renderPatchNames
// Actor index
displayZoneI = 0;
forAll(pbMesh, patchI)
forAll(pbMesh, patchi)
{
const polyPatch& pp = pbMesh[patchI];
const polyPatch& pp = pbMesh[patchi];
label globalZoneI = 0;
// Only selected patches will have a non-zero number of zones
label nDisplayZones = min(MAXPATCHZONES, nZones[patchI]);
label nDisplayZones = min(MAXPATCHZONES, nZones[patchi]);
label increment = 1;
if (nZones[patchI] >= MAXPATCHZONES)
if (nZones[patchi] >= MAXPATCHZONES)
{
increment = nZones[patchI]/MAXPATCHZONES;
increment = nZones[patchi]/MAXPATCHZONES;
}
for (label i = 0; i < nDisplayZones; i++)
@ -779,7 +779,7 @@ void Foam::vtkPVFoam::renderPatchNames
if (debug)
{
Info<< "patch name = " << pp.name() << nl
<< "anchor = " << zoneCentre[patchI][globalZoneI] << nl
<< "anchor = " << zoneCentre[patchi][globalZoneI] << nl
<< "globalZoneI = " << globalZoneI << endl;
}
@ -802,9 +802,9 @@ void Foam::vtkPVFoam::renderPatchNames
txt->GetPositionCoordinate()->SetValue
(
zoneCentre[patchI][globalZoneI].x(),
zoneCentre[patchI][globalZoneI].y(),
zoneCentre[patchI][globalZoneI].z()
zoneCentre[patchi][globalZoneI].x(),
zoneCentre[patchi][globalZoneI].y(),
zoneCentre[patchi][globalZoneI].z()
);
// Add text to each renderer

6
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamFaceField.H
View File

@ -74,9 +74,9 @@ void Foam::vtkPVFoam::convertFaceField
// for interior faces: average owner/neighbour
// for boundary faces: owner
forAll(faceLabels, faceI)
forAll(faceLabels, facei)
{
const label faceNo = faceLabels[faceI];
const label faceNo = faceLabels[facei];
if (faceNo < nInternalFaces)
{
Type t = 0.5*(tf[faceOwner[faceNo]] + tf[faceNeigh[faceNo]]);
@ -96,7 +96,7 @@ void Foam::vtkPVFoam::convertFaceField
}
vtkOpenFOAMTupleRemap<Type>(vec);
cellData->InsertTuple(faceI, vec);
cellData->InsertTuple(facei, vec);
}

2
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamMesh.C
View File

@ -188,7 +188,7 @@ void Foam::vtkPVFoam::convertMeshPatches
<< patchName << endl;
}
vtkPolyData* vtkmesh = NULL;
vtkPolyData* vtkmesh = nullptr;
if (patchIds.size() == 1)
{
vtkmesh = patchVTKMesh(patchName, patches[patchIds.begin().key()]);

2
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamMeshLagrangian.C
View File

@ -45,7 +45,7 @@ vtkPolyData* Foam::vtkPVFoam::lagrangianVTKMesh
const word& cloudName
)
{
vtkPolyData* vtkmesh = NULL;
vtkPolyData* vtkmesh = nullptr;
if (debug)
{

8
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamMeshSet.C
View File

@ -55,10 +55,10 @@ vtkPolyData* Foam::vtkPVFoam::faceSetVTKMesh
const faceList& meshFaces = mesh.faces();
faceList patchFaces(fSet.size());
label faceI = 0;
label facei = 0;
forAllConstIter(faceSet, fSet, iter)
{
patchFaces[faceI++] = meshFaces[iter.key()];
patchFaces[facei++] = meshFaces[iter.key()];
}
primitiveFacePatch p(patchFaces, mesh.points());
@ -83,9 +83,9 @@ vtkPolyData* Foam::vtkPVFoam::faceSetVTKMesh
vtkCellArray* vtkcells = vtkCellArray::New();
vtkcells->Allocate(faces.size());
forAll(faces, faceI)
forAll(faces, facei)
{
const face& f = faces[faceI];
const face& f = faces[facei];
vtkIdType nodeIds[f.size()];
forAll(f, fp)

52
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamMeshVolume.C
View File

@ -83,9 +83,9 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
Info<< "... scanning for polyhedra" << endl;
}
forAll(cellShapes, cellI)
forAll(cellShapes, celli)
{
const cellModel& model = cellShapes[cellI].model();
const cellModel& model = cellShapes[celli].model();
if
(
@ -97,11 +97,11 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
&& model != tetWedge
)
{
const cell& cFaces = mesh.cells()[cellI];
const cell& cFaces = mesh.cells()[celli];
forAll(cFaces, cFaceI)
forAll(cFaces, cFacei)
{
const face& f = mesh.faces()[cFaces[cFaceI]];
const face& f = mesh.faces()[cFaces[cFacei]];
label nQuads = 0;
label nTris = 0;
@ -158,7 +158,7 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
vtkmesh->Allocate(mesh.nCells() + nAddCells);
// Set counters for additional points and additional cells
label addPointI = 0, addCellI = 0;
label addPointi = 0, addCelli = 0;
// Create storage for points - needed for mapping from OpenFOAM to VTK
// data types - max 'order' = hex = 8 points
@ -168,12 +168,12 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
// [numFace0Pts, id1, id2, id3, numFace1Pts, id1, id2, id3, ...]
DynamicList<vtkIdType> faceStream(256);
forAll(cellShapes, cellI)
forAll(cellShapes, celli)
{
const cellShape& cellShape = cellShapes[cellI];
const cellShape& cellShape = cellShapes[celli];
const cellModel& cellModel = cellShape.model();
superCells[addCellI++] = cellI;
superCells[addCelli++] = celli;
if (cellModel == tet)
{
@ -219,7 +219,7 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
nodeIds
);
}
else if (cellModel == tetWedge)
else if (cellModel == tetWedge && !reader_->GetUseVTKPolyhedron())
{
// Treat as squeezed prism (VTK_WEDGE)
@ -273,15 +273,15 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
else if (reader_->GetUseVTKPolyhedron())
{
// Polyhedral cell - use VTK_POLYHEDRON
const labelList& cFaces = mesh.cells()[cellI];
const labelList& cFaces = mesh.cells()[celli];
vtkIdType nFaces = cFaces.size();
vtkIdType nLabels = nFaces;
// count size for face stream
forAll(cFaces, cFaceI)
forAll(cFaces, cFacei)
{
const face& f = mesh.faces()[cFaces[cFaceI]];
const face& f = mesh.faces()[cFaces[cFacei]];
nLabels += f.size();
}
@ -291,10 +291,10 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
faceStream.clear();
faceStream.reserve(nLabels + nFaces);
forAll(cFaces, cFaceI)
forAll(cFaces, cFacei)
{
const face& f = mesh.faces()[cFaces[cFaceI]];
const bool isOwner = (owner[cFaces[cFaceI]] == cellI);
const face& f = mesh.faces()[cFaces[cFacei]];
const bool isOwner = (owner[cFaces[cFacei]] == celli);
const label nFacePoints = f.size();
// number of labels for this face
@ -325,20 +325,20 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
// Polyhedral cell. Decompose into tets + prisms.
// Mapping from additional point to cell
addPointCellLabels[addPointI] = cellI;
addPointCellLabels[addPointi] = celli;
// The new vertex from the cell-centre
const label newVertexLabel = mesh.nPoints() + addPointI;
vtkInsertNextOpenFOAMPoint(vtkpoints, mesh.C()[cellI]);
const label newVertexLabel = mesh.nPoints() + addPointi;
vtkInsertNextOpenFOAMPoint(vtkpoints, mesh.C()[celli]);
// Whether to insert cell in place of original or not.
bool substituteCell = true;
const labelList& cFaces = mesh.cells()[cellI];
forAll(cFaces, cFaceI)
const labelList& cFaces = mesh.cells()[celli];
forAll(cFaces, cFacei)
{
const face& f = mesh.faces()[cFaces[cFaceI]];
const bool isOwner = (owner[cFaces[cFaceI]] == cellI);
const face& f = mesh.faces()[cFaces[cFacei]];
const bool isOwner = (owner[cFaces[cFacei]] == celli);
// Number of triangles and quads in decomposition
label nTris = 0;
@ -360,7 +360,7 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
}
else
{
superCells[addCellI++] = cellI;
superCells[addCelli++] = celli;
}
const face& quad = quadFcs[quadI];
@ -403,7 +403,7 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
}
else
{
superCells[addCellI++] = cellI;
superCells[addCelli++] = celli;
}
const face& tri = triFcs[triI];
@ -432,7 +432,7 @@ vtkUnstructuredGrid* Foam::vtkPVFoam::volumeVTKMesh
}
}
addPointI++;
addPointi++;
}
}

4
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamMeshZone.C
View File

@ -54,9 +54,9 @@ vtkPolyData* Foam::vtkPVFoam::pointZoneVTKMesh
vtkPoints* vtkpoints = vtkPoints::New();
vtkpoints->Allocate(pointLabels.size());
forAll(pointLabels, pointI)
forAll(pointLabels, pointi)
{
vtkInsertNextOpenFOAMPoint(vtkpoints, meshPoints[pointLabels[pointI]]);
vtkInsertNextOpenFOAMPoint(vtkpoints, meshPoints[pointLabels[pointi]]);
}
vtkmesh->SetPoints(vtkpoints);

2
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamPointFields.H
View File

@ -152,7 +152,7 @@ void Foam::vtkPVFoam::convertPointFields
// Extract the field on the zone
Field<Type> fld
(
ptf.internalField(),
ptf.primitiveField(),
mesh.faceZones()[zoneId]().meshPoints()
);

4
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamTemplates.C
View File

@ -71,9 +71,9 @@ vtkPolyData* Foam::vtkPVFoam::patchVTKMesh
vtkCellArray* vtkcells = vtkCellArray::New();
vtkcells->Allocate(faces.size());
forAll(faces, faceI)
forAll(faces, facei)
{
const face& f = faces[faceI];
const face& f = faces[facei];
vtkIdType nodeIds[f.size()];
forAll(f, fp)

30
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamUpdateInfo.C
View File

@ -228,7 +228,7 @@ void Foam::vtkPVFoam::updateInfoPatches
if (debug)
{
Info<< "<beg> Foam::vtkPVFoam::updateInfoPatches"
<< " [meshPtr=" << (meshPtr_ ? "set" : "NULL") << "]" << endl;
<< " [meshPtr=" << (meshPtr_ ? "set" : "nullptr") << "]" << endl;
}
@ -295,9 +295,9 @@ void Foam::vtkPVFoam::updateInfoPatches
if (!reader_->GetShowGroupsOnly())
{
forAll(patches, patchI)
forAll(patches, patchi)
{
const polyPatch& pp = patches[patchI];
const polyPatch& pp = patches[patchi];
if (pp.size())
{
@ -344,12 +344,12 @@ void Foam::vtkPVFoam::updateInfoPatches
wordList names(patchEntries.size());
labelList sizes(patchEntries.size());
forAll(patchEntries, patchI)
forAll(patchEntries, patchi)
{
const dictionary& patchDict = patchEntries[patchI].dict();
const dictionary& patchDict = patchEntries[patchi].dict();
sizes[patchI] = readLabel(patchDict.lookup("nFaces"));
names[patchI] = patchEntries[patchI].keyword();
sizes[patchi] = readLabel(patchDict.lookup("nFaces"));
names[patchi] = patchEntries[patchi].keyword();
}
@ -358,9 +358,9 @@ void Foam::vtkPVFoam::updateInfoPatches
HashTable<labelList, word> groups(patchEntries.size());
forAll(patchEntries, patchI)
forAll(patchEntries, patchi)
{
const dictionary& patchDict = patchEntries[patchI].dict();
const dictionary& patchDict = patchEntries[patchi].dict();
wordList groupNames;
patchDict.readIfPresent("inGroups", groupNames);
@ -373,11 +373,11 @@ void Foam::vtkPVFoam::updateInfoPatches
);
if (iter != groups.end())
{
iter().append(patchI);
iter().append(patchi);
}
else
{
groups.insert(groupNames[groupI], labelList(1, patchI));
groups.insert(groupNames[groupI], labelList(1, patchi));
}
}
}
@ -432,14 +432,14 @@ void Foam::vtkPVFoam::updateInfoPatches
if (!reader_->GetShowGroupsOnly())
{
forAll(names, patchI)
forAll(names, patchi)
{
// Valid patch if nFace > 0 - add patch to GUI list
if (sizes[patchI])
if (sizes[patchi])
{
arraySelection->AddArray
(
(names[patchI] + " - patch").c_str()
(names[patchi] + " - patch").c_str()
);
++nPatches;
@ -476,7 +476,7 @@ void Foam::vtkPVFoam::updateInfoZones
if (debug)
{
Info<< "<beg> Foam::vtkPVFoam::updateInfoZones"
<< " [meshPtr=" << (meshPtr_ ? "set" : "NULL") << "]" << endl;
<< " [meshPtr=" << (meshPtr_ ? "set" : "nullptr") << "]" << endl;
}
wordList namesLst;

2
applications/utilities/postProcessing/graphics/PVReaders/PVFoamReader/vtkPVFoam/vtkPVFoamUpdateInfoFields.H
View File

@ -41,7 +41,7 @@ void Foam::vtkPVFoam::updateInfoFields
{
Info<< "<beg> Foam::vtkPVFoam::updateInfoFields <"
<< meshType::Mesh::typeName
<< "> [meshPtr=" << (meshPtr_ ? "set" : "NULL") << "]"
<< "> [meshPtr=" << (meshPtr_ ? "set" : "nullptr") << "]"
<< endl;
}