ENH: improve handling of ThirdParty packages

- generalize some of the library extensions (.so vs .dylib).
  Provide as wmake 'sysFunctions'

- added note about unsupported/incomplete system support

- centralize detection of ThirdParty packages into wmake/ subdirectory
  by providing a series of scripts in the spirit of GNU autoconfig.
  For example,

      have_boost, have_readline, have_scotch, ...

  Each of the `have_<package>` scripts will generally provide the
  following type of functions:

      have_<package>          # detection
      no_<package>            # reset
      echo_<package>          # echoing

  and the following type of variables:

      HAVE_<package>          # unset or 'true'
      <package>_ARCH_PATH     # root for <package>
      <package>_INC_DIR       # include directory for <package>
      <package>_LIB_DIR       # library directory for <package>

  This simplifies the calling scripts:

      if have_metis
      then
          wmake metisDecomp
      fi

  As well as reducing clutter in the corresponding Make/options:

      EXE_INC = \
          -I$(METIS_INC_DIR) \
          -I../decompositionMethods/lnInclude

      LIB_LIBS = \
          -L$(METIS_LIB_DIR) -lmetis

  Any additional modifications (platform-specific or for an external build
  system) can now be made centrally.
This commit is contained in:
Mark Olesen
2018-04-24 14:51:19 +02:00
parent 672f0574e2
commit b4d38ab468
82 changed files with 1796 additions and 608 deletions

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@ -1,9 +1,9 @@
#!/bin/sh
cd ${0%/*} || exit 1 # Run from this directory
# Parse arguments for library compilation
cd ${0%/*} || exit 1 # Run from this directory
. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
#------------------------------------------------------------------------------
decompose/Allwmake $targetType $*
reconstruct/Allwmake $targetType $*
wmake $targetType distributed

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@ -1,221 +1,15 @@
#!/bin/sh
cd ${0%/*} || exit 1 # Run from this directory
# Parse arguments for library compilation
cd ${0%/*} || exit 1 # Run from this directory
. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
. $WM_PROJECT_DIR/wmake/scripts/have_kahip
. $WM_PROJECT_DIR/wmake/scripts/have_metis
. $WM_PROJECT_DIR/wmake/scripts/have_scotch
: ${FOAM_EXT_LIBBIN:=/usr/lib$WM_COMPILER_LIB_ARCH} # Extra safety
#------------------------------------------------------------------------------
: ${FOAM_EXT_LIBBIN:=/usr/lib$WM_COMPILER_LIB_ARCH} # Extra safety?
export FOAM_EXT_LIBBIN
# Check for the existence of any of the files
# On success, echoes the file found and returns 0, otherwise returns 2
findFirstFile()
{
local file
for file
do
if [ -f "$file" -a -r "$file" ]
then
echo "$file"
return 0
fi
done
return 2
}
# Test for kahip.
# - return 0 and export KAHIP_ARCH_PATH on success
hasKahip()
{
local warning="==> skip kahip"
local header label settings
unset KAHIP_ARCH_PATH KAHIP_VERSION
settings=$($WM_PROJECT_DIR/bin/foamEtcFile config.sh/kahip) || {
echo "$warning (no config.sh/kahip settings)"
return 1
}
. $settings
if [ -z "$KAHIP_ARCH_PATH" -o "${KAHIP_ARCH_PATH##*-}" = none ]
then
echo "$warning (not available)"
return 1
fi
# Header
header=$(findFirstFile \
$KAHIP_ARCH_PATH/include/kaHIP_interface.h \
/usr/include/kaHIP_interface.h \
) || {
echo "$warning (no header)"
return 2 # file not found
}
# Library
[ "${KAHIP_ARCH_PATH##*-}" = system ] || \
findFirstFile \
$FOAM_EXT_LIBBIN/libkahip.so \
$KAHIP_ARCH_PATH/lib/libkahip.a \
$KAHIP_ARCH_PATH/lib/libkahip.so \
$KAHIP_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH/libkahip.a \
$KAHIP_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH/libkahip.so \
> /dev/null || {
echo "$warning (missing library)"
return 2
}
# kahip itself is 32-bit int, but our interface itself handles some
# 64-bit conversion (mesh size).
export KAHIP_ARCH_PATH
echo "kahip (label=32) - $KAHIP_ARCH_PATH"
}
# Test for metis.
# - return 0 and export METIS_ARCH_PATH on success
hasMetis()
{
local warning="==> skip metis"
local header label settings
unset METIS_ARCH_PATH METIS_VERSION
settings=$($WM_PROJECT_DIR/bin/foamEtcFile config.sh/metis) || {
echo "$warning (no config.sh/metis settings)"
return 1
}
. $settings
if [ -z "$METIS_ARCH_PATH" -o "${METIS_ARCH_PATH##*-}" = none ]
then
echo "$warning (not available)"
return 1
fi
# Header
header=$(findFirstFile \
$METIS_ARCH_PATH/include/metis.h \
/usr/include/metis.h \
) || {
echo "$warning (no header)"
return 2 # file not found
}
# Library
[ "${METIS_ARCH_PATH##*-}" = system ] || \
findFirstFile \
$FOAM_EXT_LIBBIN/libmetis.so \
$METIS_ARCH_PATH/lib/libmetis.a \
$METIS_ARCH_PATH/lib/libmetis.so \
$METIS_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH/libmetis.a \
$METIS_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH/libmetis.so \
> /dev/null || {
echo "$warning (missing library)"
return 2
}
# Ensure consistent sizes between OpenFOAM and metis header
# Extract IDXTYPEWIDTH from metis.h: regex as per ThirdParty Allwmake
label=$(sed -ne 's/^.*#define *IDXTYPEWIDTH *\([1-9][0-9]\).*/\1/p' $header)
: ${label:=unknown}
if [ "$WM_LABEL_SIZE" = "$label" ]
then
echo "Metis (label=$label) - $METIS_ARCH_PATH"
export METIS_ARCH_PATH
else
echo "$warning (label=$WM_LABEL_SIZE, metis.h has '$label')"
return 1
fi
}
# Test for scotch.
# - return 0 and export SCOTCH_ARCH_PATH, SCOTCH_VERSION on success
hasScotch()
{
local warning="==> skip scotch"
local header label settings
unset SCOTCH_ARCH_PATH SCOTCH_VERSION
settings=$($WM_PROJECT_DIR/bin/foamEtcFile config.sh/scotch) || {
echo "$warning (no config.sh/scotch settings)"
return 1
}
. $settings
if [ -z "$SCOTCH_ARCH_PATH" -o "${SCOTCH_ARCH_PATH##*-}" = none ]
then
echo "$warning (not available)"
return 1
fi
# Header
header=$(findFirstFile \
$SCOTCH_ARCH_PATH/include/scotch.h \
/usr/include/scotch/scotch.h \
/usr/include/scotch.h
) || {
echo "$warning (no header)"
return 2 # file not found
}
# Library
[ "${SCOTCH_ARCH_PATH##*-}" = system ] || \
findFirstFile \
$FOAM_EXT_LIBBIN/libscotch.so \
$SCOTCH_ARCH_PATH/lib/libscotch.a \
$SCOTCH_ARCH_PATH/lib/libscotch.so \
$SCOTCH_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH/libscotch.a \
$SCOTCH_ARCH_PATH/lib$WM_COMPILER_LIB_ARCH/libscotch.so \
> /dev/null || {
echo "$warning (missing library)"
return 2
}
# Ensure consistent sizes between OpenFOAM and scotch header
# extract 'typedef int64_t SCOTCH_Num' or equivalent
label=$(sed -ne \
's/^.*typedef *\([^ ]*\) *SCOTCH_Num.*/\1/ip' \
"$header")
: ${label:=unknown}
# No SCOTCH_VERSION set? Try to obtain from header
# extract #define SCOTCH_VERSION, SCOTCH_RELEASE, SCOTCH_PATCHLEVEL
[ -n "$SCOTCH_VERSION" ] || \
SCOTCH_VERSION=$(
eval $(
sed -ne \
's/^ *#define *SCOTCH_\(VERSION\|RELEASE\|PATCHLEVEL\) *\([0-9][0-9]*\).*$/\1=\2/p' \
"$header"
)
set -- $VERSION $RELEASE $PATCHLEVEL
IFS="."
[ "$#" -gt 0 ] && echo "scotch-$*"
)
# Failsafe value
: ${SCOTCH_VERSION:=scotch}
case "$WM_LABEL_SIZE:$label" in
(32:int32_t | 32:int | 64:int64_t | 64:long)
echo "Scotch (label=$label) - $SCOTCH_ARCH_PATH"
export SCOTCH_ARCH_PATH SCOTCH_VERSION
;;
*)
echo "$warning (label='$WM_LABEL_SIZE', scotch.h has '$label')"
return 1
;;
esac
}
#
# Define how to create an mpi-versioned library of $targetType
# compile into qualified directory
@ -244,7 +38,7 @@ wmakeMpiLib()
wmakeLnInclude -u decompositionMethods
if hasScotch
if have_scotch
then
wmake $targetType scotchDecomp
if [ -d "$FOAM_LIBBIN/$FOAM_MPI" ]
@ -253,12 +47,12 @@ then
fi
fi
if hasMetis
if have_metis
then
wmake $targetType metisDecomp
fi
if hasKahip
if have_kahip
then
wmake $targetType kahipDecomp
fi

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@ -1,15 +1,10 @@
EXE_INC = \
-I$(KAHIP_ARCH_PATH)/include \
-I$(KAHIP_INC_DIR) \
-I../decompositionMethods/lnInclude
/*
* The $(KAHIP_ARCH_PATH)/lib$WM_COMPILER_LIB_ARCH path is provided
* to support central, non-thirdparty installations.
*
* KaHIP is often compiled with openmp, but may be missing the
* link dependency for openmp.
* KaHIP is usually compiled with openmp, but may be missing the
* openmp link dependency.
*/
LIB_LIBS = \
-L$(KAHIP_ARCH_PATH)/lib \
-L$(KAHIP_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
-L$(FOAM_EXT_LIBBIN) $(LINK_OPENMP) -lkahip
-L$(KAHIP_LIB_DIR) $(LINK_OPENMP) -lkahip

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@ -1,14 +1,6 @@
EXE_INC = \
/* -DFULLDEBUG -g -O0 */ \
-I$(METIS_ARCH_PATH)/include \
-I$(METIS_INC_DIR) \
-I../decompositionMethods/lnInclude
/*
* The $(METIS_ARCH_PATH)/lib$WM_COMPILER_LIB_ARCH path is provided
* to support central, non-thirdparty installations
*/
LIB_LIBS = \
-L$(METIS_ARCH_PATH)/lib \
-L$(METIS_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
-L$(FOAM_EXT_LIBBIN) \
-lmetis
-L$(METIS_LIB_DIR) -lmetis

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@ -3,21 +3,16 @@ sinclude $(RULES)/mplib$(WM_MPLIB)
EXE_INC = \
$(PFLAGS) $(PINC) \
-I../decompositionMethods/lnInclude \
-I$(SCOTCH_ARCH_PATH)/include/$(FOAM_MPI) \
-I$(SCOTCH_ARCH_PATH)/include \
-I/usr/include/scotch \
-I../decompositionMethods/lnInclude
-I$(SCOTCH_INC_DIR)
/*
* The '-lscotch' is a slight hack:
* ptscotch 6 requires scotch linked in, but does not declare the dependency
*
* The $(SCOTCH_ARCH_PATH)/lib$WM_COMPILER_LIB_ARCH path is provided
* to support central, non-thirdparty installations
*/
LIB_LIBS = \
-L$(SCOTCH_ARCH_PATH)/lib \
-L$(SCOTCH_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
-L$(SCOTCH_LIB_DIR) \
-L$(FOAM_EXT_LIBBIN) \
-L$(FOAM_EXT_LIBBIN)/$(FOAM_MPI) \
-lptscotch \

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@ -7,18 +7,8 @@ sinclude $(RULES)/mplib$(WM_MPLIB)
EXE_INC = \
$(PFLAGS) $(PINC) \
-I$(SCOTCH_ARCH_PATH)/include \
-I/usr/include/scotch \
-I$(SCOTCH_INC_DIR) \
-I../decompositionMethods/lnInclude
/*
* The $(SCOTCH_ARCH_PATH)/lib$WM_COMPILER_LIB_ARCH path is provided
* to support central, non-thirdparty installations
*/
LIB_LIBS = \
-L$(SCOTCH_ARCH_PATH)/lib \
-L$(SCOTCH_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
-L$(FOAM_EXT_LIBBIN) \
-lscotch \
-lscotcherrexit \
-lrt
-L$(SCOTCH_LIB_DIR) -lscotch -lscotcherrexit -lrt

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@ -1,9 +1,9 @@
#!/bin/sh
cd ${0%/*} || exit 1 # Run from this directory
# Parse arguments for library compilation
cd ${0%/*} || exit 1 # Run from this directory
. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
#------------------------------------------------------------------------------
wmake $targetType reconstruct
#------------------------------------------------------------------------------