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Merge remote branch 'OpenCFD/master' into olesenm

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This commit is contained in:
Mark Olesen
2011-01-26 16:45:22 +01:00
parent 0498967cc6 d404293a6f
commit c891e7065a
96 changed files with 5389 additions and 4515 deletions
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4
ReleaseNotes-dev
View File

@ -5,7 +5,7 @@
#+DATE: TBA #+DATE: TBA
#+LINK: http://www.openfoam.com #+LINK: http://www.openfoam.com
#+OPTIONS: author:nil ^:{} #+OPTIONS: author:nil ^:{}
# Copyright (c) 2010 OpenCFD Ltd. # Copyright (c) 2011 OpenCFD Ltd.
* Overview * Overview
OpenFOAM-dev is the latest major release of OpenFOAM including many new OpenFOAM-dev is the latest major release of OpenFOAM including many new
@ -117,7 +117,7 @@
*** *New* compact binary I/O for faces and cells. This speeds up reading/writing meshes in binary. *** *New* compact binary I/O for faces and cells. This speeds up reading/writing meshes in binary.
*** *Updated* runTimeModifiable *** *Updated* runTimeModifiable
+ user selectable model to use for checking run-time modifiable + user selectable model to use for checking run-time modifiable
dictionaries: dictionaries (see also doc/changes/inotify.txt):
+ timeStamp : use time stamp as before + timeStamp : use time stamp as before
+ inotify : use inotify instead of time stamp + inotify : use inotify instead of time stamp
+ timeStampMaster : only master checks and reads file. Slaves get file + timeStampMaster : only master checks and reads file. Slaves get file

220
applications/test/globalMeshData/Test-globalMeshData.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -50,133 +50,71 @@ int main(int argc, char *argv[])
const globalMeshData& globalData = mesh.globalData(); const globalMeshData& globalData = mesh.globalData();
const indirectPrimitivePatch& coupledPatch = globalData.coupledPatch(); const indirectPrimitivePatch& coupledPatch = globalData.coupledPatch();
const globalIndexAndTransform& transforms = globalData.globalTransforms();
// Test:print (collocated) shared points // Test:print shared points
{ {
const labelListList& globalPointSlaves =
globalData.globalPointSlaves();
const mapDistribute& globalPointSlavesMap = const mapDistribute& globalPointSlavesMap =
globalData.globalPointSlavesMap(); globalData.globalPointSlavesMap();
const labelListList& slaves =
globalData.globalPointSlaves();
const labelListList& transformedSlaves =
globalData.globalPointTransformedSlaves();
// Create field with my local data
pointField coords(globalPointSlavesMap.constructSize()); pointField coords(globalPointSlavesMap.constructSize());
SubList<point>(coords, coupledPatch.nPoints()).assign SubList<point>(coords, coupledPatch.nPoints()).assign
( (
coupledPatch.localPoints() coupledPatch.localPoints()
); );
// Exchange data // Exchange data. Apply positional transforms.
globalPointSlavesMap.distribute(coords); globalPointSlavesMap.distribute(transforms, coords, true);
// Print // Print
forAll(globalPointSlaves, pointI) forAll(slaves, pointI)
{ {
const labelList& slavePoints = globalPointSlaves[pointI]; const labelList& slavePoints = slaves[pointI];
if (slavePoints.size() > 0) if (slavePoints.size() > 0)
{ {
Pout<< "Master point:" << pointI Pout<< "Master point:" << pointI
<< " coord:" << coords[pointI] << " coord:" << coords[pointI]
<< " connected to slave points:" << endl; << " connected to untransformed slave points:" << endl;
forAll(slavePoints, i) forAll(slavePoints, i)
{ {
Pout<< " " << coords[slavePoints[i]] << endl; Pout<< " " << coords[slavePoints[i]] << endl;
} }
} }
}
}
const labelList& transformedSlavePoints = transformedSlaves[pointI];
if (transformedSlavePoints.size() > 0)
// Test: (collocated) point to faces addressing
{
const labelListList& globalPointBoundaryFaces =
globalData.globalPointBoundaryFaces();
const mapDistribute& globalPointBoundaryFacesMap =
globalData.globalPointBoundaryFacesMap();
label nBnd = mesh.nFaces()-mesh.nInternalFaces();
pointField fc(globalPointBoundaryFacesMap.constructSize());
SubList<point>(fc, nBnd).assign
(
primitivePatch
(
SubList<face>
(
mesh.faces(),
nBnd,
mesh.nInternalFaces()
),
mesh.points()
).faceCentres()
);
// Exchange data
globalPointBoundaryFacesMap.distribute(fc);
// Print
forAll(globalPointBoundaryFaces, pointI)
{
const labelList& bFaces = globalPointBoundaryFaces[pointI];
Pout<< "Point:" << pointI
<< " at:" << coupledPatch.localPoints()[pointI]
<< " connected to faces:" << endl;
forAll(bFaces, i)
{ {
Pout<< " " << fc[bFaces[i]] << endl; Pout<< "Master point:" << pointI
<< " coord:" << coords[pointI]
<< " connected to transformed slave points:" << endl;
forAll(transformedSlavePoints, i)
{
Pout<< " " << coords[transformedSlavePoints[i]]
<< endl;
}
} }
} }
} }
// Test:print shared edges
// Test:(collocated) point to cells addressing
{ {
const labelList& boundaryCells = globalData.boundaryCells();
const labelListList& globalPointBoundaryCells =
globalData.globalPointBoundaryCells();
const mapDistribute& globalPointBoundaryCellsMap =
globalData.globalPointBoundaryCellsMap();
pointField cc(globalPointBoundaryCellsMap.constructSize());
forAll(boundaryCells, i)
{
cc[i] = mesh.cellCentres()[boundaryCells[i]];
}
// Exchange data
globalPointBoundaryCellsMap.distribute(cc);
// Print
forAll(globalPointBoundaryCells, pointI)
{
const labelList& bCells = globalPointBoundaryCells[pointI];
Pout<< "Point:" << pointI
<< " at:" << coupledPatch.localPoints()[pointI]
<< " connected to cells:" << endl;
forAll(bCells, i)
{
Pout<< " " << cc[bCells[i]] << endl;
}
}
}
// Test:print (collocated) shared edges
{
const labelListList& globalEdgeSlaves =
globalData.globalEdgeSlaves();
const mapDistribute& globalEdgeSlavesMap = const mapDistribute& globalEdgeSlavesMap =
globalData.globalEdgeSlavesMap(); globalData.globalEdgeSlavesMap();
const labelListList& slaves =
globalData.globalEdgeSlaves();
const labelListList& transformedSlaves =
globalData.globalEdgeTransformedSlaves();
// Test: distribute edge centres // Test: distribute edge centres
pointField ec(globalEdgeSlavesMap.constructSize()); pointField ec(globalEdgeSlavesMap.constructSize());
@ -188,13 +126,13 @@ int main(int argc, char *argv[])
); );
} }
// Exchange data // Exchange data Apply positional transforms.
globalEdgeSlavesMap.distribute(ec); globalEdgeSlavesMap.distribute(transforms, ec, true);
// Print // Print
forAll(globalEdgeSlaves, edgeI) forAll(slaves, edgeI)
{ {
const labelList& slaveEdges = globalEdgeSlaves[edgeI]; const labelList& slaveEdges = slaves[edgeI];
if (slaveEdges.size() > 0) if (slaveEdges.size() > 0)
{ {
@ -207,10 +145,102 @@ int main(int argc, char *argv[])
Pout<< " " << ec[slaveEdges[i]] << endl; Pout<< " " << ec[slaveEdges[i]] << endl;
} }
} }
const labelList& transformedSlaveEdges = transformedSlaves[edgeI];
if (transformedSlaveEdges.size() > 0)
{
Pout<< "Master edge:" << edgeI
<< " centre:" << ec[edgeI]
<< " connected to transformed slave edges:" << endl;
forAll(transformedSlaveEdges, i)
{
Pout<< " " << ec[transformedSlaveEdges[i]]
<< endl;
}
}
} }
} }
//// Test: (collocated) point to faces addressing
//{
// const labelListList& globalPointBoundaryFaces =
// globalData.globalPointBoundaryFaces();
// const mapDistribute& globalPointBoundaryFacesMap =
// globalData.globalPointBoundaryFacesMap();
//
// label nBnd = mesh.nFaces()-mesh.nInternalFaces();
//
// pointField fc(globalPointBoundaryFacesMap.constructSize());
// SubList<point>(fc, nBnd).assign
// (
// primitivePatch
// (
// SubList<face>
// (
// mesh.faces(),
// nBnd,
// mesh.nInternalFaces()
// ),
// mesh.points()
// ).faceCentres()
// );
//
// // Exchange data
// globalPointBoundaryFacesMap.distribute(fc);
//
// // Print
// forAll(globalPointBoundaryFaces, pointI)
// {
// const labelList& bFaces = globalPointBoundaryFaces[pointI];
//
// Pout<< "Point:" << pointI
// << " at:" << coupledPatch.localPoints()[pointI]
// << " connected to faces:" << endl;
//
// forAll(bFaces, i)
// {
// Pout<< " " << fc[bFaces[i]] << endl;
// }
// }
//}
//
//
//// Test:(collocated) point to cells addressing
//{
// const labelList& boundaryCells = globalData.boundaryCells();
// const labelListList& globalPointBoundaryCells =
// globalData.globalPointBoundaryCells();
// const mapDistribute& globalPointBoundaryCellsMap =
// globalData.globalPointBoundaryCellsMap();
//
// pointField cc(globalPointBoundaryCellsMap.constructSize());
// forAll(boundaryCells, i)
// {
// cc[i] = mesh.cellCentres()[boundaryCells[i]];
// }
//
// // Exchange data
// globalPointBoundaryCellsMap.distribute(cc);
//
// // Print
// forAll(globalPointBoundaryCells, pointI)
// {
// const labelList& bCells = globalPointBoundaryCells[pointI];
//
// Pout<< "Point:" << pointI
// << " at:" << coupledPatch.localPoints()[pointI]
// << " connected to cells:" << endl;
//
// forAll(bCells, i)
// {
// Pout<< " " << cc[bCells[i]] << endl;
// }
// }
//}
Info<< "End\n" << endl; Info<< "End\n" << endl;
return 0; return 0;

3
applications/test/lduMatrix/Make/files
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@ -1,3 +0,0 @@
Test-lduMatrix3.C
EXE = $(FOAM_USER_APPBIN)/Test-lduMatrix

4
applications/test/lduMatrix/Make/options
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@ -1,4 +0,0 @@
EXE_INC = \
-I$(LIB_SRC)/finiteVolume/lnInclude
EXE_LIBS = -lfiniteVolume

163
applications/test/lduMatrix/Test-lduMatrix.C
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@ -1,163 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "argList.H"
#include "Time.H"
#include "fvMesh.H"
#include "volFields.H"
#include "LduMatrix.H"
#include "diagTensorField.H"
#include "TPCG.H"
#include "TPBiCG.H"
#include "NoPreconditioner.H"
using namespace Foam;
typedef Foam::LduMatrix<vector, diagTensor, scalar>
lduVectorMatrix;
defineNamedTemplateTypeNameAndDebug(lduVectorMatrix, 0);
typedef Foam::DiagonalSolver<vector, diagTensor, scalar>
lduVectorDiagonalSolver;
defineNamedTemplateTypeNameAndDebug(lduVectorDiagonalSolver, 0);
template<>
const vector lduVectorMatrix::great_(1e15, 1e15, 1e15);
template<>
const vector lduVectorMatrix::small_(1e-15, 1e-15, 1e-15);
namespace Foam
{
typedef LduMatrix<vector, diagTensor, scalar>::preconditioner
lduVectorPreconditioner;
defineTemplateRunTimeSelectionTable(lduVectorPreconditioner, symMatrix);
defineTemplateRunTimeSelectionTable(lduVectorPreconditioner, asymMatrix);
typedef LduMatrix<vector, diagTensor, scalar>::smoother
lduVectorSmoother;
defineTemplateRunTimeSelectionTable(lduVectorSmoother, symMatrix);
defineTemplateRunTimeSelectionTable(lduVectorSmoother, asymMatrix);
typedef LduMatrix<vector, diagTensor, scalar>::solver
lduVectorSolver;
defineTemplateRunTimeSelectionTable(lduVectorSolver, symMatrix);
defineTemplateRunTimeSelectionTable(lduVectorSolver, asymMatrix);
typedef TPCG<vector, diagTensor, scalar> TPCGVector;
defineNamedTemplateTypeNameAndDebug(TPCGVector, 0);
LduMatrix<vector, diagTensor, scalar>::solver::
addsymMatrixConstructorToTable<TPCGVector>
addTPCGSymMatrixConstructorToTable_;
typedef TPBiCG<vector, diagTensor, scalar> TPBiCGVector;
defineNamedTemplateTypeNameAndDebug(TPBiCGVector, 0);
LduMatrix<vector, diagTensor, scalar>::solver::
addasymMatrixConstructorToTable<TPBiCGVector>
addTPBiCGSymMatrixConstructorToTable_;
typedef NoPreconditioner<vector, diagTensor, scalar> NoPreconditionerVector;
defineNamedTemplateTypeNameAndDebug(NoPreconditionerVector, 0);
LduMatrix<vector, diagTensor, scalar>::preconditioner::
addsymMatrixConstructorToTable<NoPreconditionerVector>
addNoPreconditionerSymMatrixConstructorToTable_;
LduMatrix<vector, diagTensor, scalar>::preconditioner::
addasymMatrixConstructorToTable<NoPreconditionerVector>
addNoPreconditionerAsymMatrixConstructorToTable_;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Main program:
int main(int argc, char *argv[])
{
# include "setRootCase.H"
# include "createTime.H"
# include "createMesh.H"
volVectorField psi
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
lduVectorMatrix testMatrix(mesh);
testMatrix.diag() = 2*pTraits<diagTensor>::one;
testMatrix.source() = pTraits<vector>::one;
testMatrix.upper() = 0.1;
testMatrix.lower() = -0.1;
Info<< testMatrix << endl;
FieldField<Field, scalar> boundaryCoeffs(0);
FieldField<Field, scalar> internalCoeffs(0);
autoPtr<lduVectorMatrix::solver> testMatrixSolver =
lduVectorMatrix::solver::New
(
psi.name(),
testMatrix,
boundaryCoeffs,
internalCoeffs,
psi.boundaryField().interfaces(),
IStringStream
(
"PBiCG"
"{"
" preconditioner none;"
" tolerance (1e-05 1e-05 1e-05);"
" relTol (0 0 0);"
"}"
)()
);
lduVectorMatrix::solverPerformance solverPerf =
testMatrixSolver->solve(psi);
solverPerf.print();
Info<< psi << endl;
Info<< "End\n" << endl;
return 0;
}
// ************************************************************************* //

163
applications/test/lduMatrix/Test-lduMatrix2.C
View File

@ -1,163 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "argList.H"
#include "Time.H"
#include "fvMesh.H"
#include "volFields.H"
#include "LduMatrix.H"
#include "tensorField.H"
#include "TPCG.H"
#include "TPBiCG.H"
#include "NoPreconditioner.H"
using namespace Foam;
typedef Foam::LduMatrix<vector, tensor, scalar>
lduVectorMatrix;
defineNamedTemplateTypeNameAndDebug(lduVectorMatrix, 0);
typedef Foam::DiagonalSolver<vector, tensor, scalar>
lduVectorDiagonalSolver;
defineNamedTemplateTypeNameAndDebug(lduVectorDiagonalSolver, 0);
template<>
const vector lduVectorMatrix::great_(1e15, 1e15, 1e15);
template<>
const vector lduVectorMatrix::small_(1e-15, 1e-15, 1e-15);
namespace Foam
{
typedef LduMatrix<vector, tensor, scalar>::preconditioner
lduVectorPreconditioner;
defineTemplateRunTimeSelectionTable(lduVectorPreconditioner, symMatrix);
defineTemplateRunTimeSelectionTable(lduVectorPreconditioner, asymMatrix);
typedef LduMatrix<vector, tensor, scalar>::smoother
lduVectorSmoother;
defineTemplateRunTimeSelectionTable(lduVectorSmoother, symMatrix);
defineTemplateRunTimeSelectionTable(lduVectorSmoother, asymMatrix);
typedef LduMatrix<vector, tensor, scalar>::solver
lduVectorSolver;
defineTemplateRunTimeSelectionTable(lduVectorSolver, symMatrix);
defineTemplateRunTimeSelectionTable(lduVectorSolver, asymMatrix);
typedef TPCG<vector, tensor, scalar> TPCGVector;
defineNamedTemplateTypeNameAndDebug(TPCGVector, 0);
LduMatrix<vector, tensor, scalar>::solver::
addsymMatrixConstructorToTable<TPCGVector>
addTPCGSymMatrixConstructorToTable_;
typedef TPBiCG<vector, tensor, scalar> TPBiCGVector;
defineNamedTemplateTypeNameAndDebug(TPBiCGVector, 0);
LduMatrix<vector, tensor, scalar>::solver::
addasymMatrixConstructorToTable<TPBiCGVector>
addTPBiCGSymMatrixConstructorToTable_;
typedef NoPreconditioner<vector, tensor, scalar> NoPreconditionerVector;
defineNamedTemplateTypeNameAndDebug(NoPreconditionerVector, 0);
LduMatrix<vector, tensor, scalar>::preconditioner::
addsymMatrixConstructorToTable<NoPreconditionerVector>
addNoPreconditionerSymMatrixConstructorToTable_;
LduMatrix<vector, tensor, scalar>::preconditioner::
addasymMatrixConstructorToTable<NoPreconditionerVector>
addNoPreconditionerAsymMatrixConstructorToTable_;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Main program:
int main(int argc, char *argv[])
{
# include "setRootCase.H"
# include "createTime.H"
# include "createMesh.H"
volVectorField psi
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
lduVectorMatrix testMatrix(mesh);
testMatrix.diag() = 2*I;
testMatrix.source() = pTraits<vector>::one;
testMatrix.upper() = 0.1;
testMatrix.lower() = -0.1;
Info<< testMatrix << endl;
FieldField<Field, scalar> boundaryCoeffs(0);
FieldField<Field, scalar> internalCoeffs(0);
autoPtr<lduVectorMatrix::solver> testMatrixSolver =
lduVectorMatrix::solver::New
(
psi.name(),
testMatrix,
//boundaryCoeffs,
//internalCoeffs,
//psi.boundaryField().interfaces(),
IStringStream
(
"PBiCG"
"{"
" preconditioner none;"
" tolerance (1e-05 1e-05 1e-05);"
" relTol (0 0 0);"
"}"
)()
);
lduVectorMatrix::solverPerformance solverPerf =
testMatrixSolver->solve(psi);
solverPerf.print();
Info<< psi << endl;
Info<< "End\n" << endl;
return 0;
}
// ************************************************************************* //

148
applications/test/lduMatrix/Test-lduMatrix3.C
View File

@ -1,148 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
Application
icoFoam
Description
Transient solver for incompressible, laminar flow of Newtonian fluids.
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "LduMatrix.H"
#include "diagTensorField.H"
typedef LduMatrix<vector, scalar, scalar> lduVectorMatrix;
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
int main(int argc, char *argv[])
{
# include "setRootCase.H"
# include "createTime.H"
# include "createMesh.H"
# include "createFields.H"
# include "initContinuityErrs.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Info<< "\nStarting time loop\n" << endl;
while (runTime.loop())
{
Info<< "Time = " << runTime.timeName() << nl << endl;
# include "readPISOControls.H"
# include "CourantNo.H"
fvVectorMatrix UEqn
(
fvm::ddt(U)
+ fvm::div(phi, U)
- fvm::laplacian(nu, U)
);
fvVectorMatrix UEqnp(UEqn == -fvc::grad(p));
lduVectorMatrix U3Eqnp(mesh);
U3Eqnp.diag() = UEqnp.diag();
U3Eqnp.upper() = UEqnp.upper();
U3Eqnp.lower() = UEqnp.lower();
U3Eqnp.source() = UEqnp.source();
UEqnp.addBoundaryDiag(U3Eqnp.diag(), 0);
UEqnp.addBoundarySource(U3Eqnp.source(), false);
autoPtr<lduVectorMatrix::solver> U3EqnpSolver =
lduVectorMatrix::solver::New
(
U.name(),
U3Eqnp,
dictionary
(
IStringStream
(
"{"
" solver PBiCG;"
" preconditioner DILU;"
" tolerance (1e-13 1e-13 1e-13);"
" relTol (0 0 0);"
"}"
)()
)
);
U3EqnpSolver->solve(U).print(Info);
// --- PISO loop
for (int corr=0; corr<nCorr; corr++)
{
volScalarField rAU(1.0/UEqn.A());
U = rAU*UEqn.H();
phi = (fvc::interpolate(U) & mesh.Sf())
+ fvc::ddtPhiCorr(rAU, U, phi);
adjustPhi(phi, U, p);
for (int nonOrth=0; nonOrth<=nNonOrthCorr; nonOrth++)
{
fvScalarMatrix pEqn
(
fvm::laplacian(rAU, p) == fvc::div(phi)
);
pEqn.setReference(pRefCell, pRefValue);
pEqn.solve();
if (nonOrth == nNonOrthCorr)
{
phi -= pEqn.flux();
}
}
# include "continuityErrs.H"
U -= rAU*fvc::grad(p);
U.correctBoundaryConditions();
}
runTime.write();
Info<< "ExecutionTime = " << runTime.elapsedCpuTime() << " s"
<< " ClockTime = " << runTime.elapsedClockTime() << " s"
<< nl << endl;
}
Info<< "End\n" << endl;
return 0;
}
// ************************************************************************* //

56
applications/test/lduMatrix/createFields.H
View File

@ -1,56 +0,0 @@
Info<< "Reading transportProperties\n" << endl;
IOdictionary transportProperties
(
IOobject
(
"transportProperties",
runTime.constant(),
mesh,
IOobject::MUST_READ_IF_MODIFIED,
IOobject::NO_WRITE
)
);
dimensionedScalar nu
(
transportProperties.lookup("nu")
);
Info<< "Reading field p\n" << endl;
volScalarField p
(
IOobject
(
"p",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
Info<< "Reading field U\n" << endl;
volVectorField U
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
# include "createPhi.H"
label pRefCell = 0;
scalar pRefValue = 0.0;
setRefCell(p, mesh.solutionDict().subDict("PISO"), pRefCell, pRefValue);

4
applications/test/parallel/Test-parallel.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -129,7 +129,7 @@ int main(int argc, char *argv[])
mapDistribute map(constructSize, sendMap.xfer(), recvMap.xfer()); mapDistribute map(constructSize, sendMap.xfer(), recvMap.xfer());
// Distribute complexData // Distribute complexData
mapDistribute::distribute(complexData); map.distribute(complexData);
Pout<< "complexData:" << complexData << endl; Pout<< "complexData:" << complexData << endl;
} }

4
applications/utilities/mesh/generation/extrude/extrudeMesh/extrudeMesh.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -522,7 +522,7 @@ int main(int argc, char *argv[])
); );
const boundBox& bb = mesh.globalData().bb(); const boundBox& bb = mesh.bounds();
const vector span = bb.span(); const vector span = bb.span();
const scalar mergeDim = 1E-4 * bb.minDim(); const scalar mergeDim = 1E-4 * bb.minDim();

22
applications/utilities/miscellaneous/foamFormatConvert/writeMeshObject.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -44,7 +44,8 @@ inline bool writeMeshObject
( (
const word& name, const word& name,
const fileName& meshDir, const fileName& meshDir,
Time& runTime Time& runTime,
bool disableHeaderChecking = false
) )
{ {
IOobject io IOobject io
@ -67,14 +68,21 @@ inline bool writeMeshObject
// Switch off type checking (for reading e.g. faceZones as // Switch off type checking (for reading e.g. faceZones as
// generic list of dictionaries). // generic list of dictionaries).
const word oldTypeName = T::typeName; word oldTypeName;
const_cast<word&>(T::typeName) = word::null; if (disableHeaderChecking)
{
oldTypeName = T::typeName;
const_cast<word&>(T::typeName) = word::null;
}
T meshObject(io); T meshObject(io);
const_cast<word&>(T::typeName) = oldTypeName; if (disableHeaderChecking)
// Fake type back to what was in field {
const_cast<word&>(meshObject.type()) = io.headerClassName(); const_cast<word&>(T::typeName) = oldTypeName;
// Fake type back to what was in field
const_cast<word&>(meshObject.type()) = io.headerClassName();
}
Info<< " Writing " << name << endl; Info<< " Writing " << name << endl;
writeOk = meshObject.regIOobject::write(); writeOk = meshObject.regIOobject::write();

4
applications/utilities/parallelProcessing/redistributeMeshPar/redistributeMeshPar.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -910,7 +910,7 @@ int main(int argc, char *argv[])
( (
args, args,
runTime, runTime,
mesh.globalData().bb() mesh.bounds()
); );
// Mesh distribution engine // Mesh distribution engine

1
applications/utilities/postProcessing/sampling/sample/sampleDict
View File

@ -231,6 +231,7 @@ surfaces
// Sampling on triSurface // Sampling on triSurface
type sampledTriSurfaceMesh; type sampledTriSurfaceMesh;
surface integrationPlane.stl; surface integrationPlane.stl;
source boundaryFaces; // sample cells or boundaryFaces
interpolate true; interpolate true;
} }
); );

4
applications/utilities/surface/surfaceToPatch/surfaceToPatch.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -208,7 +208,7 @@ int main(int argc, char *argv[])
const scalar searchTol = args.optionLookupOrDefault("tol", 1e-3); const scalar searchTol = args.optionLookupOrDefault("tol", 1e-3);
// Get search box. Anything not within this box will not be considered. // Get search box. Anything not within this box will not be considered.
const boundBox& meshBb = mesh.globalData().bb(); const boundBox& meshBb = mesh.bounds();
const vector searchSpan = searchTol * meshBb.span(); const vector searchSpan = searchTol * meshBb.span();
Info<< "All boundary faces further away than " << searchTol Info<< "All boundary faces further away than " << searchTol

8
bin/mpirunDebug
View File

@ -3,7 +3,7 @@
# ========= | # ========= |
# \\ / F ield | OpenFOAM: The Open Source CFD Toolbox # \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
# \\ / O peration | # \\ / O peration |
# \\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. # \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
# \\/ M anipulation | # \\/ M anipulation |
#------------------------------------------------------------------------------- #-------------------------------------------------------------------------------
# License # License
@ -145,12 +145,12 @@ fi
# use FOAM_SETTINGS to pass command-line settings # use FOAM_SETTINGS to pass command-line settings
if [ "$FOAM_INST_DIR" ] if [ "$FOAM_INST_DIR" ]
then then
sourceFoam='[ "$WM_PROJECT" ] || '"FOAM_INST_DIR=$FOAM_INST_DIR . $sourceFoam $FOAM_SETTINGS" sourceFoam="FOAM_INST_DIR=$FOAM_INST_DIR . $sourceFoam $FOAM_SETTINGS"
else else
sourceFoam='[ "$WM_PROJECT" ] || '". $sourceFoam $FOAM_SETTINGS" sourceFoam=". $sourceFoam $FOAM_SETTINGS"
fi fi
echo "**sourceFoam:$sourceFoam $FOAM_SETTINGS" echo "**sourceFoam:$sourceFoam"
rm -f $PWD/mpirun.schema rm -f $PWD/mpirun.schema
touch $PWD/mpirun.schema touch $PWD/mpirun.schema

4
doc/changes/inotify.txt
View File

@ -1,4 +1,6 @@
2010-05-28 http://www.openfoam.com
Copyright (c) 2011 OpenCFD Ltd.
Cleanup of automatic regIOobject rereading. Cleanup of automatic regIOobject rereading.
- all files (usually only IOdictionary) that need to be monitored - all files (usually only IOdictionary) that need to be monitored

41
doc/changes/pointAndEdgeSync.txt Normal file
View File

@ -0,0 +1,41 @@
http://www.openfoam.com
Copyright (c) 2011 OpenCFD Ltd.
Some background on the new structure to synchronise point and edge data. The
building blocks:
- globalIndex : globally consecutive numbering of (untransformed) data. It
consists of a single label which starts at 0 on processor 0 and is numbered
consecutively on consecutive processors. The globalIndex class contains
functions to convert to/from processor and local index.
- globalIndexAndTransform : all the transformations in a mesh. Because the
transformations (cyclics, processorCyclics) need to fill space there can
be only three independent transforms. This class contains functions to encode
local index,processor and transformation into a labelPair.
- mapDistribute : contains constructors from local and remote data and
works out a compact storage scheme and returns corresponding indices into
the local storage and calculates a scheduling to get the local and remote
data into the local storage. The wanted data is
- untransformed: labelList(List) in globalIndex numbering
- transformed: labelPairList(List) in globalIndexAndTransform
See also mapDistribute.H
- globalMeshData : works out and stores a mapDistribute to get hold
of coupled point or edge data:
- globalPointSlavesMap() : the map to get all coupled point data
into a compact form
- globalPointSlaves : per point (on the patch of coupled faces) the
indices into the compact data corresponding to untransformed connected
points
- globalPointTransformedSlaves : same but for transformed connected
points
See e.g. syncPointData which applies a reduction operator to data on
coupled points. Note that it needs to know whether the data is a position
(since might need separation() vector).
These structures get used in e.g.
- syncTools : general synchronisation on points,edges, faces. The point and
edge synchronisation are thin wrappers around the globalMeshData functionality.
- volPointInterpolation : uses a mix of globalMeshData (for synchronising
collocated points) and patch-wise (for separated points).

3
doc/changes/splitCyclic.txt
View File

@ -1,3 +1,6 @@
http://www.openfoam.com
Copyright (c) 2011 OpenCFD Ltd.
Short overview of the changes to have cyclics split into two halves. Short overview of the changes to have cyclics split into two halves.
Cyclics Cyclics

2
src/OpenFOAM/Make/files
View File

@ -42,6 +42,8 @@ primitives/SphericalTensor2D/sphericalTensor2D/sphericalTensor2D.C
primitives/Vector2D/vector2D/vector2D.C primitives/Vector2D/vector2D/vector2D.C
primitives/complex/complex.C primitives/complex/complex.C
primitives/globalIndexAndTransform/globalIndexAndTransform.C
primitives/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransform.C
primitives/quaternion/quaternion.C primitives/quaternion/quaternion.C
primitives/septernion/septernion.C primitives/septernion/septernion.C

1893
src/OpenFOAM/meshes/polyMesh/globalMeshData/globalMeshData.C
View File

File diff suppressed because it is too large Load Diff

357
src/OpenFOAM/meshes/polyMesh/globalMeshData/globalMeshData.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -32,52 +32,56 @@ Description
- all processor patches to have correct ordering. - all processor patches to have correct ordering.
- all processorPatches to have their transforms set. - all processorPatches to have their transforms set.
The shared point addressing is quite interesting. It gives on each processor The shared point and edge addressing is quite interesting.
the vertices that cannot be set using a normal swap on processor patches. It calculates addressing for points and edges on coupled patches. In
These are the vertices that are shared between more than 2 processors. the 'old' way a distincation was made between points/edges that are
only on two processors and those that are on multiple processors. The
problem is that those on multiple processors do not allow any
transformations and require a global reduction on the master processor.
There is an issue with these shared vertices if they originate from The alternative is to have an exchange schedule (through a 'mapDistribute')
cyclics (i.e. are now separated processor patches). They will all be which sends all point/edge data (no distinction is made between
mapped to the same global point (so even though the processor points are those on two and those on more than two coupled patches) to the local
not on the same location) since topologically they are one and the same. 'master'. This master then does any calculation and sends
the result back to the 'slave' points/edges. This only needs to be done
on points on coupled faces. Any transformation is done using a predetermined
set of transformations - since transformations have to be space filling
only a certain number of transformation is supported.
So if you ask for sharedPoints() you get only one of the coordinates of The exchange needs
the topologically shared points. - a field of data
- a mapDistribute which does all parallel exchange and transformations
This appens remote data to the end of the field.
- a set of indices which indicate where to get untransformed data in the
field
- a set of indices which indicate where to get transformed data in the
field
All the hard work of these shared points is done by the globalPoints class. See also mapDistribute, globalIndexAndTransform
Shared edges: similar to shared points gives on all processors the edges Notes:
that are shared between more than two patches (i.e. the edges on which - compared to 17x nTotalFaces, nTotalPoints do not compensate for
data cannot be synchronized by a straightforward edge data swap). Note shared points since this would trigger full connectivity analysis
that shared edges will use shared points but not all edges between shared - most calculation is demand driven and uses parallel communication
points need to be shared edges (e.g. there might be an edge connecting so make sure to invoke on all processors at the same time.
two disconnected regions of shared points). - old sharedEdge calculation: currently an edge is considered shared
Currently an edge is considered shared
if it uses two shared points and is used more than once. This is not if it uses two shared points and is used more than once. This is not
correct on processor patches but it only slightly overestimates the number correct on processor patches but it only slightly overestimates the number
of shared edges. Doing full analysis of how many patches use the edge of shared edges. Doing full analysis of how many patches use the edge
would be too complicated. would be too complicated.
Shared edge calculation is demand driven so always make sure to have
your first call to one of the access functions synchronous amongst all
processors!
SourceFiles SourceFiles
globalMeshData.C globalMeshData.C
globalMeshDataTemplates.C
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
#ifndef globalMeshData_H #ifndef globalMeshData_H
#define globalMeshData_H #define globalMeshData_H
#include "Switch.H"
#include "processorTopology.H" #include "processorTopology.H"
#include "labelPair.H" #include "labelPair.H"
#include "indirectPrimitivePatch.H" #include "indirectPrimitivePatch.H"
#include "boundBox.H"
#include "IOobject.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -86,13 +90,11 @@ namespace Foam
// Forward declaration of friend functions and operators // Forward declaration of friend functions and operators
class globalMeshData;
Ostream& operator<<(Ostream&, const globalMeshData&);
class globalIndex;
class polyMesh; class polyMesh;
class mapDistribute; class mapDistribute;
template<class T> class EdgeMap; template<class T> class EdgeMap;
class globalPoints; class globalIndex;
class globalIndexAndTransform;
/*---------------------------------------------------------------------------*\ /*---------------------------------------------------------------------------*\
Class globalMeshData Declaration Class globalMeshData Declaration
@ -126,9 +128,6 @@ class globalMeshData
}; };
typedef List<labelPair> labelPairList;
// Private data // Private data
//- Reference to mesh //- Reference to mesh
@ -137,9 +136,6 @@ class globalMeshData
// Data related to the complete mesh // Data related to the complete mesh
//- Bounding box of complete mesh
boundBox bb_;
//- Total number of points in the complete mesh //- Total number of points in the complete mesh
label nTotalPoints_; label nTotalPoints_;
@ -165,23 +161,70 @@ class globalMeshData
labelList processorPatchNeighbours_; labelList processorPatchNeighbours_;
// Coupled point addressing
// This is addressing from coupled point to coupled points/faces/cells.
// This is a full schedule so includes points used by only two
// coupled patches.
//- Patch of coupled faces. Additional patch edge to mesh edges
// correspondence:
// points: meshPoints(), meshPointMap()
// edges : meshEdges(), meshEdgeMap()
mutable autoPtr<indirectPrimitivePatch> coupledPatchPtr_;
mutable autoPtr<labelList> coupledPatchMeshEdgesPtr_;
mutable autoPtr<Map<label> > coupledPatchMeshEdgeMapPtr_;
//- Global numbering for coupledPatch points
mutable autoPtr<globalIndex> globalPointNumberingPtr_;
//- Global numbering for transforms
mutable autoPtr<globalIndexAndTransform> globalTransformsPtr_;
// Coupled point to coupled points
mutable autoPtr<labelListList> globalPointSlavesPtr_;
mutable autoPtr<labelListList> globalPointTransformedSlavesPtr_;
mutable autoPtr<mapDistribute> globalPointSlavesMapPtr_;
// Coupled edge to coupled edges
mutable autoPtr<globalIndex> globalEdgeNumberingPtr_;
mutable autoPtr<labelListList> globalEdgeSlavesPtr_;
mutable autoPtr<labelListList> globalEdgeTransformedSlavesPtr_;
mutable autoPtr<mapDistribute> globalEdgeSlavesMapPtr_;
//// Coupled point to boundary faces
//
//mutable autoPtr<globalIndex> globalBoundaryFaceNumberingPtr_;
//mutable autoPtr<labelListList> globalPointBoundaryFacesPtr_;
//mutable autoPtr<mapDistribute> globalPointBoundaryFacesMapPtr_;
//
//// Coupled point to collocated boundary cells
//
//mutable autoPtr<labelList> boundaryCellsPtr_;
//mutable autoPtr<globalIndex> globalBoundaryCellNumberingPtr_;
//mutable autoPtr<labelListList> globalPointBoundaryCellsPtr_;
//mutable autoPtr<mapDistribute> globalPointBoundaryCellsMapPtr_;
// Globally shared point addressing // Globally shared point addressing
//- Total number of global points //- Total number of global points
label nGlobalPoints_; mutable label nGlobalPoints_;
//- Indices of local points that are globally shared //- Indices of local points that are globally shared
labelList sharedPointLabels_; mutable autoPtr<labelList> sharedPointLabelsPtr_;
//- Indices of globally shared points in the master list //- Indices of globally shared points in the master list
// This list contains all the shared points in the mesh // This list contains all the shared points in the mesh
labelList sharedPointAddr_; mutable autoPtr<labelList> sharedPointAddrPtr_;
//- Shared point global labels. //- Shared point global labels.
// Global point index for every local shared point. // Global point index for every local shared point.
// Only valid if constructed with this information or if // Only valid if constructed with this information or if
// pointProcAddressing read. // pointProcAddressing read.
mutable labelList* sharedPointGlobalLabelsPtr_; mutable autoPtr<labelList> sharedPointGlobalLabelsPtr_;
// Globally shared edge addressing. Derived from shared points. // Globally shared edge addressing. Derived from shared points.
@ -191,68 +234,11 @@ class globalMeshData
mutable label nGlobalEdges_; mutable label nGlobalEdges_;
//- Indices of local edges that are globally shared //- Indices of local edges that are globally shared
mutable labelList* sharedEdgeLabelsPtr_; mutable autoPtr<labelList> sharedEdgeLabelsPtr_;
//- Indices of globally shared edge in the master list //- Indices of globally shared edge in the master list
// This list contains all the shared edges in the mesh // This list contains all the shared edges in the mesh
mutable labelList* sharedEdgeAddrPtr_; mutable autoPtr<labelList> sharedEdgeAddrPtr_;
// Coupled point addressing
// This is addressing from coupled point to coupled points/faces/cells.
// Two variants:
// - collocated (so not physically separated)
// - also separated
// This is a full schedule so includes points only used by two
// coupled patches.
mutable autoPtr<indirectPrimitivePatch> coupledPatchPtr_;
mutable autoPtr<labelList> coupledPatchMeshEdgesPtr_;
mutable autoPtr<Map<label> > coupledPatchMeshEdgeMapPtr_;
// Collocated
// Coupled point to collocated coupled points
mutable autoPtr<globalIndex> globalPointNumberingPtr_;
mutable autoPtr<labelListList> globalPointSlavesPtr_;
mutable autoPtr<mapDistribute> globalPointSlavesMapPtr_;
// Coupled edge to collocated coupled edges
mutable autoPtr<globalIndex> globalEdgeNumberingPtr_;
mutable autoPtr<labelListList> globalEdgeSlavesPtr_;
mutable autoPtr<mapDistribute> globalEdgeSlavesMapPtr_;
// Coupled point to collocated boundary faces
mutable autoPtr<globalIndex> globalBoundaryFaceNumberingPtr_;
mutable autoPtr<labelListList> globalPointBoundaryFacesPtr_;
mutable autoPtr<mapDistribute> globalPointBoundaryFacesMapPtr_;
// Coupled point to collocated boundary cells
mutable autoPtr<labelList> boundaryCellsPtr_;
mutable autoPtr<globalIndex> globalBoundaryCellNumberingPtr_;
mutable autoPtr<labelListList> globalPointBoundaryCellsPtr_;
mutable autoPtr<mapDistribute> globalPointBoundaryCellsMapPtr_;
// Non-collocated as well
// Coupled point to all coupled points
mutable autoPtr<globalIndex> globalPointAllNumberingPtr_;
mutable autoPtr<labelListList> globalPointAllSlavesPtr_;
mutable autoPtr<mapDistribute> globalPointAllSlavesMapPtr_;
// Coupled edge to all coupled edges (same numbering as
// collocated coupled edges)
mutable autoPtr<labelListList> globalEdgeAllSlavesPtr_;
mutable autoPtr<mapDistribute> globalEdgeAllSlavesMapPtr_;
// Private Member Functions // Private Member Functions
@ -268,70 +254,18 @@ class globalMeshData
label& label&
); );
//- Calculate shared point addressing
void calcSharedPoints() const;
//- Calculate shared edge addressing //- Calculate shared edge addressing
void calcSharedEdges() const; void calcSharedEdges() const;
//- Count coincident faces. //- Calculate global point addressing.
static label countCoincidentFaces
(
const scalar tolDim,
const vectorField& separationDist
);
//- Calculate global point addressing.
void calcGlobalPointSlaves
(
const globalPoints&,
autoPtr<globalIndex>&,
autoPtr<labelListList>&,
autoPtr<mapDistribute>&
) const;
//- Calculate global point addressing.
void calcGlobalPointSlaves() const; void calcGlobalPointSlaves() const;
//- Calculate global edge addressing.
void calcGlobalEdgeSlaves
(
const labelListList&,
const mapDistribute&,
const globalIndex&,
autoPtr<labelListList>&,
autoPtr<mapDistribute>&
) const;
//- Calculate global edge addressing. //- Calculate global edge addressing.
void calcGlobalEdgeSlaves() const; void calcGlobalEdgeSlaves() const;
//- Calculate coupled point to uncoupled boundary faces. Local only.
void calcPointBoundaryFaces(labelListList& pointBoundaryFaces) const;
//- Calculate global point to global boundary face addressing.
void calcGlobalPointBoundaryFaces() const;
//- Calculate global point to global boundary cell addressing.
void calcGlobalPointBoundaryCells() const;
// Non-collocated
//- Calculate global point addressing.
void calcGlobalPointAllSlaves() const;
//- Calculate global edge addressing.
void calcGlobalEdgeAllSlaves() const;
//- Synchronise pointwise data
template<class Type, class CombineOp>
void syncPointData
(
List<Type>& pointData,
const labelListList& slaves,
const mapDistribute& slavesMap,
const CombineOp& cop
) const;
//- Disallow default bitwise copy construct //- Disallow default bitwise copy construct
globalMeshData(const globalMeshData&); globalMeshData(const globalMeshData&);
@ -348,7 +282,7 @@ public:
// Static data members // Static data members
//- Geomtric tolerance (fraction of bounding box) //- Geomteric tolerance (fraction of bounding box)
static const Foam::scalar matchTol_; static const Foam::scalar matchTol_;
@ -357,10 +291,6 @@ public:
//- Construct from mesh, derive rest (does parallel communication!) //- Construct from mesh, derive rest (does parallel communication!)
globalMeshData(const polyMesh& mesh); globalMeshData(const polyMesh& mesh);
//- Old behaviour: read constructor given IOobject and a polyMesh
// reference. Only use this for testing!
globalMeshData(const IOobject& io, const polyMesh& mesh);
//- Destructor //- Destructor
~globalMeshData(); ~globalMeshData();
@ -386,24 +316,21 @@ public:
return processorPatches_.size() > 0; return processorPatches_.size() > 0;
} }
const boundBox& bb() const //- Return total number of points in decomposed mesh. Not
{ // compensated for duplicate points!
return bb_;
}
//- Return total number of points in decomposed mesh
label nTotalPoints() const label nTotalPoints() const
{ {
return nTotalPoints_; return nTotalPoints_;
} }
//- Return total number of faces in decomposed mesh //- Return total number of faces in decomposed mesh. Not
// compensated for duplicate faces!
label nTotalFaces() const label nTotalFaces() const
{ {
return nTotalFaces_; return nTotalFaces_;
} }
//- Return total number of cells in decomposed mesh //- Return total number of cells in decomposed mesh.
label nTotalCells() const label nTotalCells() const
{ {
return nTotalCells_; return nTotalCells_;
@ -438,16 +365,10 @@ public:
// Globally shared point addressing // Globally shared point addressing
//- Return number of globally shared points //- Return number of globally shared points
label nGlobalPoints() const label nGlobalPoints() const;
{
return nGlobalPoints_;
}
//- Return indices of local points that are globally shared //- Return indices of local points that are globally shared
const labelList& sharedPointLabels() const const labelList& sharedPointLabels() const;
{
return sharedPointLabels_;
}
//- Return addressing into the complete globally shared points //- Return addressing into the complete globally shared points
// list // list
@ -457,10 +378,7 @@ public:
// points. Shared point addressing gives the index in the // points. Shared point addressing gives the index in the
// list of all globally shared points for each of the locally // list of all globally shared points for each of the locally
// shared points. // shared points.
const labelList& sharedPointAddr() const const labelList& sharedPointAddr() const;
{
return sharedPointAddr_;
}
//- Return shared point global labels. Tries to read //- Return shared point global labels. Tries to read
// 'pointProcAddressing' and returns list or -1 if none // 'pointProcAddressing' and returns list or -1 if none
@ -515,70 +433,47 @@ public:
//- Return map from mesh edges to coupledPatch edges //- Return map from mesh edges to coupledPatch edges
const Map<label>& coupledPatchMeshEdgeMap() const; const Map<label>& coupledPatchMeshEdgeMap() const;
//- Global transforms numbering
const globalIndexAndTransform& globalTransforms() const;
// Coupled point to collocated coupled points. Coupled points are //- Helper: synchronise data with transforms
template<class Type, class CombineOp>
static void syncData
(
List<Type>& pointData,
const labelListList& slaves,
const labelListList& transformedSlaves,
const mapDistribute& slavesMap,
const globalIndexAndTransform&,
const CombineOp& cop,
const bool isPosition
);
// Coupled point to coupled points. Coupled points are
// points on any coupled patch. // points on any coupled patch.
//- Numbering of coupled points is according to coupledPatch. //- Numbering of coupled points is according to coupledPatch.
const globalIndex& globalPointNumbering() const; const globalIndex& globalPointNumbering() const;
//- For every coupled point the indices into the field
// distributed by below map.
const labelListList& globalPointSlaves() const; const labelListList& globalPointSlaves() const;
const labelListList& globalPointTransformedSlaves() const;
const mapDistribute& globalPointSlavesMap() const; const mapDistribute& globalPointSlavesMap() const;
//- Helper to synchronise mesh data //- Helper to synchronise mesh point data
template<class Type, class CombineOp> template<class Type, class CombineOp>
void syncPointData void syncPointData
( (
List<Type>& pointData, List<Type>& pointData,
const CombineOp& cop const CombineOp& cop,
const bool isPosition
) const; ) const;
// Coupled edge to coupled edges. // Coupled edge to coupled edges.
const globalIndex& globalEdgeNumbering() const; const globalIndex& globalEdgeNumbering() const;
const labelListList& globalEdgeSlaves() const; const labelListList& globalEdgeSlaves() const;
const labelListList& globalEdgeTransformedSlaves() const;
const mapDistribute& globalEdgeSlavesMap() const; const mapDistribute& globalEdgeSlavesMap() const;
// Coupled point to boundary faces. These are uncoupled boundary
// faces only but include empty patches.
//- Numbering of boundary faces is face-mesh.nInternalFaces()
const globalIndex& globalBoundaryFaceNumbering() const;
const labelListList& globalPointBoundaryFaces() const;
const mapDistribute& globalPointBoundaryFacesMap() const;
// Coupled point to boundary cell
//- From boundary cell to mesh cell
const labelList& boundaryCells() const;
//- Numbering of boundary cells is according to boundaryCells()
const globalIndex& globalBoundaryCellNumbering() const;
const labelListList& globalPointBoundaryCells() const;
const mapDistribute& globalPointBoundaryCellsMap() const;
// Collocated & non-collocated
// Coupled point to all coupled points (collocated and
// non-collocated).
const globalIndex& globalPointAllNumbering()const;
const labelListList& globalPointAllSlaves() const;
const mapDistribute& globalPointAllSlavesMap() const;
//- Helper to synchronise mesh data
template<class Type, class CombineOp>
void syncPointAllData
(
List<Type>& pointData,
const CombineOp& cop
) const;
// Coupled edge to all coupled edges (same numbering as
// collocated)
const labelListList& globalEdgeAllSlaves() const;
const mapDistribute& globalEdgeAllSlavesMap() const;
// Other // Other
@ -617,16 +512,6 @@ public:
// full parallel analysis to determine shared points and // full parallel analysis to determine shared points and
// boundaries. // boundaries.
void updateMesh(); void updateMesh();
// Write
bool write() const;
// Ostream Operator
friend Ostream& operator<<(Ostream&, const globalMeshData&);
}; };

153
src/OpenFOAM/meshes/polyMesh/globalMeshData/globalMeshDataTemplates.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -29,13 +29,73 @@ License
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
template<class Type, class CombineOp>
void Foam::globalMeshData::syncData
(
List<Type>& elems,
const labelListList& slaves,
const labelListList& transformedSlaves,
const mapDistribute& slavesMap,
const globalIndexAndTransform& transforms,
const CombineOp& cop,
const bool isPosition
)
{
// Pull slave data onto master
slavesMap.distribute(transforms, elems, isPosition);
// Combine master data with slave data
forAll(slaves, i)
{
Type& elem = elems[i];
const labelList& slavePoints = slaves[i];
const labelList& transformSlavePoints = transformedSlaves[i];
if (slavePoints.size()+transformSlavePoints.size() > 0)
{
// Combine master with untransformed slave data
forAll(slavePoints, j)
{
cop(elem, elems[slavePoints[j]]);
}
// Combine master with transformed slave data
forAll(transformSlavePoints, j)
{
cop(elem, elems[transformSlavePoints[j]]);
}
// Copy result back to slave slots
forAll(slavePoints, j)
{
elems[slavePoints[j]] = elem;
}
forAll(transformSlavePoints, j)
{
elems[transformSlavePoints[j]] = elem;
}
}
}
// Push slave-slot data back to slaves
slavesMap.reverseDistribute
(
transforms,
elems.size(),
elems,
isPosition
);
}
template<class Type, class CombineOp> template<class Type, class CombineOp>
void Foam::globalMeshData::syncPointData void Foam::globalMeshData::syncPointData
( (
List<Type>& pointData, List<Type>& pointData,
const labelListList& slaves, const CombineOp& cop,
const mapDistribute& slavesMap, const bool isPosition
const CombineOp& cop
) const ) const
{ {
if (pointData.size() != mesh_.nPoints()) if (pointData.size() != mesh_.nPoints())
@ -46,81 +106,26 @@ void Foam::globalMeshData::syncPointData
<< abort(FatalError); << abort(FatalError);
} }
// Transfer onto coupled patch
const indirectPrimitivePatch& cpp = coupledPatch(); const indirectPrimitivePatch& cpp = coupledPatch();
const labelList& meshPoints = cpp.meshPoints(); List<Type> cppFld(UIndirectList<Type>(pointData, cpp.meshPoints()));
// Copy mesh (point)data to coupled patch (point)data syncData
Field<Type> cppFld(slavesMap.constructSize());
forAll(meshPoints, patchPointI)
{
cppFld[patchPointI] = pointData[meshPoints[patchPointI]];
}
// Pull slave data onto master
slavesMap.distribute(cppFld);
// Combine master data with slave data
forAll(slaves, patchPointI)
{
const labelList& slavePoints = slaves[patchPointI];
// Combine master with slave data
forAll(slavePoints, i)
{
cop(cppFld[patchPointI], cppFld[slavePoints[i]]);
}
// Copy result back to slave slots
forAll(slavePoints, i)
{
cppFld[slavePoints[i]] = cppFld[patchPointI];
}
}
// Push master data back to slaves
slavesMap.reverseDistribute(meshPoints.size(), cppFld);
// Update mesh (point)data from coupled patch (point)data
forAll(meshPoints, patchPointI)
{
pointData[meshPoints[patchPointI]] = cppFld[patchPointI];
}
}
template<class Type, class CombineOp>
void Foam::globalMeshData::syncPointData
(
List<Type>& pointData,
const CombineOp& cop
) const
{
const labelListList& slaves = globalPointSlaves();
const mapDistribute& map = globalPointSlavesMap();
syncPointData
( (
pointData, cppFld,
slaves, globalPointSlaves(),
map, globalPointTransformedSlaves(),
cop globalPointSlavesMap(),
globalTransforms(),
cop,
isPosition
); );
}
// Extract back onto mesh
template<class Type, class CombineOp> forAll(cpp.meshPoints(), i)
void Foam::globalMeshData::syncPointAllData {
( pointData[cpp.meshPoints()[i]] = cppFld[i];
List<Type>& pointData, }
const CombineOp& cop
) const
{
syncPointData
(
pointData,
globalPointAllSlaves(),
globalPointAllSlavesMap(),
cop
);
} }

1242
src/OpenFOAM/meshes/polyMesh/globalMeshData/globalPoints.C
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263
src/OpenFOAM/meshes/polyMesh/globalMeshData/globalPoints.H
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@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -39,17 +39,15 @@ Description
- f[0] ordering on patch faces to be ok. - f[0] ordering on patch faces to be ok.
Works by constructing equivalence lists for all the points on processor Works by constructing equivalence lists for all the points on processor
patches. These list are in globalIndex numbering (so consecutively numbered patches. These list are in globalIndexAndTransform numbering
per processor)
E.g. E.g.
@verbatim @verbatim
((7 93)(4 731)(3 114)) ((7 93)(4 731)(3 114))
@endverbatim @endverbatim
means point 93 on proc7 is connected to point 731 on proc4 and 114 on proc3. means point 93 on proc7 is connected to point 731 on proc4 and 114 on proc3.
It then gets the lowest numbered processor (the 'master') to request a It then assigns the lowest numbered processor to be the local 'master' and
sharedPoint label from processor0 and it redistributes this label back to constructs a mapDistribute to send all data to this master.
the other processors in the equivalence list.
Algorithm: Algorithm:
- get meshPoints of all my points on processor patches and initialize - get meshPoints of all my points on processor patches and initialize
@ -64,24 +62,9 @@ Description
endloop until nothing changes endloop until nothing changes
At this point one will have complete point-point connectivity for all At this point one will have complete point-point connectivity for all
points on processor patches. Now points on processor patches. Now (optionally) remove point
equivalences of size 2. These are just normal points shared
- (optional)remove point equivalences of size 2. These are between two neighbouring procPatches.
just normal points shared between two neighbouring procPatches.
- collect on each processor points for which it is the master
- request number of sharedPointLabels from the Pstream::master.
This information gets redistributed to all processors in a similar way
as that in which the equivalence lists were collected:
- initialize the indices of shared points I am the master for
loop
- send my known sharedPoints + meshPoints to all neighbours
- receive from all neighbour. Find which meshPoint on my processor
the sharedpoint is connected to
- mark indices for which information has changed
endloop until nothing changes.
Note: the data held is either mesh point labels (construct from mesh only) Note: the data held is either mesh point labels (construct from mesh only)
or patch point labels (construct from mesh and patch). or patch point labels (construct from mesh and patch).
@ -95,12 +78,9 @@ SourceFiles
#define globalPoints_H #define globalPoints_H
#include "DynamicList.H" #include "DynamicList.H"
#include "Map.H"
#include "primitivePatch.H"
#include "edgeList.H"
#include "globalIndex.H"
#include "indirectPrimitivePatch.H" #include "indirectPrimitivePatch.H"
#include "PackedBoolList.H" #include "globalIndex.H"
#include "globalIndexAndTransform.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -112,7 +92,7 @@ class polyMesh;
class polyBoundaryMesh; class polyBoundaryMesh;
class cyclicPolyPatch; class cyclicPolyPatch;
class polyPatch; class polyPatch;
class coupledPolyPatch; class mapDistribute;
/*---------------------------------------------------------------------------*\ /*---------------------------------------------------------------------------*\
Class globalPoints Declaration Class globalPoints Declaration
@ -120,91 +100,85 @@ class coupledPolyPatch;
class globalPoints class globalPoints
{ {
// Static data members
//- Offset to add to points (in globalIndices) originating from
// collocated coupled points.
static const label fromCollocated;
// Private data // Private data
//- Mesh reference //- Mesh reference
const polyMesh& mesh_; const polyMesh& mesh_;
//- Global numbering of points //- Global numbering of untransformed points
globalIndex globalIndices_; globalIndex globalIndices_;
//- Global numbering of transformed points
const globalIndexAndTransform globalTransforms_;
//- Sum of points on processor patches (unfiltered, point on 2 patches //- Sum of points on processor patches (unfiltered, point on 2 patches
// counts as 2) // counts as 2)
const label nPatchPoints_; const label nPatchPoints_;
//- All points on boundaries and their corresponding connected points //- All points on boundaries and their corresponding connected points
// on other processors. // on other processors.
DynamicList<labelList> procPoints_; DynamicList<labelPairList> procPoints_;
//- Map from mesh (or patch) point to index in procPoints //- Map from mesh (or patch) point to index in procPoints
Map<label> meshToProcPoint_; Map<label> meshToProcPoint_;
//- Shared points used by this processor (= global point number)
labelList sharedPointAddr_;
//- My mesh(or patch) points corresponding to the shared points // Calculated mapDistribute addressing
labelList sharedPointLabels_;
//- Non-transformed connected points per point (in mapDistribute
// indices)
labelListList pointPoints_;
//- Transformed points per point (in mapDistribute indices)
labelListList transformedPointPoints_;
//- Corresponding map
autoPtr<mapDistribute> map_;
//- Total number of shared points.
label nGlobalPoints_;
// Private Member Functions // Private Member Functions
// Wrappers around global point numbering to add collocated bit //- Helper function to sort according minimum proc, minimum index,
// minimum transform
//- Convert into globalIndices and add collocated bit class globalIndexAndTransformLessThan
label toGlobal(const label, const bool isCollocated) const; {
public:
//- Is collocated bit set bool operator()
bool isCollocated(const label globalI) const; (
const labelPair& a,
//- Remove collocated bit const labelPair& b
label removeCollocated(const label globalI) const; );
};
//- (remove collocated bit and) check if originates from local proc
bool isLocal(const label globalI) const;
//- (remove collocated bit and) get originating processor
label whichProcID(const label globalI) const;
//- (remove collocated bit and) convert to local number on processor
label toLocal(const label procI, const label globalI) const;
//- (remove collocated bit and) convert to local number on
// Pstream::myProcNo
label toLocal(const label globalI) const;
//- Count all points on processorPatches. Is all points for which //- Count all points on processorPatches. Is all points for which
// information is collected. // information is collected.
static label countPatchPoints(const polyBoundaryMesh&); static label countPatchPoints(const polyBoundaryMesh&);
labelPairList addSendTransform
(
const label patchI,
const labelPairList& info
) const;
//- Add information about patchPointI in relative indices to send //- Add information about patchPointI in relative indices to send
// buffers (patchFaces, indexInFace etc.) // buffers (patchFaces, indexInFace etc.)
static void addToSend void addToSend
( (
const primitivePatch&, const polyPatch&,
const label patchPointI, const label patchPointI,
const labelList&, const labelPairList&,
DynamicList<label>& patchFaces, DynamicList<label>& patchFaces,
DynamicList<label>& indexInFace, DynamicList<label>& indexInFace,
DynamicList<labelList>& allInfo DynamicList<labelPairList>& allInfo
); ) const;
//- Merge info from neighbour into my data //- Merge info from neighbour into my data
static bool mergeInfo static bool mergeInfo
( (
const labelList& nbrInfo, const labelPairList& nbrInfo,
labelList& myInfo const label localPointI,
labelPairList& myInfo
); );
//- From mesh point to 'local point'. Is the mesh point itself //- From mesh point to 'local point'. Is the mesh point itself
@ -223,18 +197,26 @@ class globalPoints
); );
//- Store (and merge) info for meshPointI //- Store (and merge) info for meshPointI
bool storeInfo bool storeInitialInfo
( (
const labelList& nbrInfo, const labelPairList& nbrInfo,
const label localPointI, const label localPointI
const bool isCollocated
); );
//- Store (and merge) info for meshPointI
bool mergeInfo
(
const labelPairList& nbrInfo,
const label localPointI
);
//- Get the signs for the individual transforms
FixedList<label, 3> transformBits(const label transformIndex) const;
void printProcPoints void printProcPoints
( (
const labelList& patchToMeshPoint, const labelList& patchToMeshPoint,
const labelList& pointInfo, const labelPairList& pointInfo
Ostream& os
) const; ) const;
//- Initialize procPoints_ to my patch points. allPoints = true: //- Initialize procPoints_ to my patch points. allPoints = true:
@ -260,6 +242,7 @@ class globalPoints
( (
const bool mergeSeparated, const bool mergeSeparated,
const Map<label>&, const Map<label>&,
const labelList&,
PstreamBuffers&, PstreamBuffers&,
labelHashSet& labelHashSet&
); );
@ -268,34 +251,6 @@ class globalPoints
// Used to remove normal face-face connected points. // Used to remove normal face-face connected points.
void remove(const labelList& patchToMeshPoint, const Map<label>&); void remove(const labelList& patchToMeshPoint, const Map<label>&);
//- Compact out unused elements of procPoints.
void compact(const labelList& patchToMeshPoint);
//- Get indices of point for which I am master (lowest numbered proc)
labelList getMasterPoints(const labelList& patchToMeshPoint) const;
//- Send subset of shared points to neighbours
void sendSharedPoints
(
const bool mergeSeparated,
PstreamBuffers&,
const DynamicList<label>&
) const;
//- Take over any local shared points
void extendSharedPoints(const Map<label>&, DynamicList<label>&);
//- Receive shared points and update subset.
void receiveSharedPoints
(
const bool mergeSeparated,
const Map<label>& meshToPatchPoint,
const Map<label>& meshToShared,
PstreamBuffers&,
DynamicList<label>&
);
//- Return mesh points of other side in same order as my meshPoints. //- Return mesh points of other side in same order as my meshPoints.
static labelList reverseMeshPoints(const cyclicPolyPatch&); static labelList reverseMeshPoints(const cyclicPolyPatch&);
@ -325,7 +280,7 @@ public:
//- Construct from mesh. //- Construct from mesh.
// keepAllPoints = false : filter out points that are on two // keepAllPoints = false : filter out points that are on two
// neighbouring coupled patches (so can be swapped) // neighbouring coupled patches only (so can be swapped)
// mergeSeparated: // mergeSeparated:
// true : merge coupled points across separated patches. // true : merge coupled points across separated patches.
// false : do not merge across coupled separated patches. // false : do not merge across coupled separated patches.
@ -338,8 +293,7 @@ public:
//- Construct from mesh and patch of coupled faces. Difference with //- Construct from mesh and patch of coupled faces. Difference with
// construct from mesh only is that this stores the meshToProcPoint, // construct from mesh only is that this stores the meshToProcPoint,
// procPoints and sharedPointLabels as patch local point labels // procPoints as patch local point labels instead of mesh point labels.
// instead of mesh point labels.
globalPoints globalPoints
( (
const polyMesh& mesh, const polyMesh& mesh,
@ -353,43 +307,68 @@ public:
// Access // Access
//- Global numbering of untransformed (mesh or patch) points
const globalIndex& globalIndices() const
{
return globalIndices_;
}
//- Global numbering of transformed (mesh or patch) points
const globalIndexAndTransform& globalTransforms() const
{
return globalTransforms_;
}
//- Non-transformed connected points per point (in mapDistribute
// indices)
const labelListList& pointPoints() const
{
return pointPoints_;
}
//- Non-transformed connected points per point (in mapDistribute
// indices)
labelListList& pointPoints()
{
return pointPoints_;
}
//- Transformed points per point (in mapDistribute indices)
const labelListList& transformedPointPoints() const
{
return transformedPointPoints_;
}
//- Transformed points per point (in mapDistribute indices)
labelListList& transformedPointPoints()
{
return transformedPointPoints_;
}
//- Corresponding map
const mapDistribute& map() const
{
return map_();
}
//- Corresponding map
mapDistribute& map()
{
return map_();
}
//- From (mesh or patch) point to index in procPoints //- From (mesh or patch) point to index in procPoints
const Map<label>& meshToProcPoint() const const Map<label>& meshToProcPoint() const
{ {
return meshToProcPoint_; return meshToProcPoint_;
} }
//- procPoints is per point the connected points (in global //- procPoints is per point the connected points (in
// point numbers) // globalTransformAndIndex point numbers)
const DynamicList<labelList>& procPoints() const const DynamicList<labelPairList>& procPoints() const
{ {
return procPoints_; return procPoints_;
} }
//- Global numbering of (mesh or patch) points
const globalIndex& globalIndices() const
{
return globalIndices_;
}
//- shared points used by this processor (= global point number)
const labelList& sharedPointAddr() const
{
return sharedPointAddr_;
}
//- my (mesh or patch)points corresponding to the shared points
const labelList& sharedPointLabels() const
{
return sharedPointLabels_;
}
//- total number of shared points
label nGlobalPoints() const
{
return nGlobalPoints_;
}
}; };

1053
src/OpenFOAM/meshes/polyMesh/mapPolyMesh/mapDistribute/mapDistribute.C
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404
src/OpenFOAM/meshes/polyMesh/mapPolyMesh/mapDistribute/mapDistribute.H
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@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -35,22 +35,92 @@ Note:
Schedule is a list of processor pairs (one send, one receive. One of Schedule is a list of processor pairs (one send, one receive. One of
them will be myself) which forms a scheduled (i.e. non-buffered) exchange. them will be myself) which forms a scheduled (i.e. non-buffered) exchange.
See distribute on how to use it. See distribute on how to use it.
Note2: number of items send on one processor have to equal the number Note2: number of items sent on one processor have to equal the number
of items received on the other processor. of items received on the other processor.
Constructors using compact numbering: all my own elements first To aid constructing these maps there are the constructors from global
(whether used or not) followed by used-only remote elements. numbering, either with or without transforms.
- without transforms:
Constructors using compact numbering: layout is
- all my own elements first (whether used or not)
- followed by used-only remote elements sorted by remote processor.
So e.g 4 procs and on proc 1 the compact So e.g 4 procs and on proc 1 the compact
table will first have all globalIndex.localSize() elements from proc1 table will first have all globalIndex.localSize() elements from proc1
followed by used-only elements of proc0, proc2, proc3. followed by used-only elements of proc0, proc2, proc3.
The constructed mapDistribute sends the local elements from and The constructed mapDistribute sends the local elements from and
receives the remote elements into their compact position. receives the remote elements into their compact position.
compactMap[procI] is the position of elements from procI in the compact compactMap[procI] is the position of elements from procI in the compact
map. compactMap[myProcNo()] is empty since trivial addressing. The indices map. compactMap[myProcNo()] is empty since trivial addressing.
into compactMap[procI] are local, not global, indices.
It rewrites the input global indices into indices into the constructed
data.
- with transforms:
This requires the precalculated set of possible transforms
(globalIndexAndTransform). These are given as permutations (+, -, or none)
of up to 3 independent transforms.
The layout of the data is
- all my own elements first (whether used or not)
- followed by used-only remote elements sorted by remote processor.
- followed by - for each transformation index - the set of local or
remote elements with that transformation.
The inputs for the constructor are
- the set of untransformed local or remote indices in globalIndex
numbering. These get rewritten to be indices into the layout of the data.
- the set of transformed local or remote indices in globalIndexAndTransform
encoding. These are labelPairs.
Any distribute with transforms is now done as:
1. exchange data with other processors and receive these into the
slots for that processor
2. for all transformations transform a subset of the data according
to transformElements_[transformI] and store this starting from
transformStart_[transformI]
In the same way a reverse distribute will
1. apply the inverse transform to the data starting at
transformStart_[transformI] and copy the result back into the
transformElements_[transformI]. These might be local or remote slots.
2. the data in the remote slots will now be sent back to the correct
location in the originating processor.
E.g. a map to handle
- mesh points on a mesh with
- 1 cyclic so 3 permutations (+,-,none) will have layout
- on e.g. processor 1 out of 2:
+------+ <- transformStart[2]
| |
| | <- transform2 applied to data in local or remote slots
| |
+------+ <- transformStart[1]
| |
| | <- transform1 applied to data in local or remote slots
| |
+------+ <- transformStart[1]
| |
| | <- transform0 applied to data in local or remote slots
| |
+------+ <- transformStart[0]
| |
| | <- data from proc2
| |
+------+
| |
| | <- data from proc0
| |
+------+ <- mesh.nPoints()
| |
| |
| |
+------+ 0
SourceFiles SourceFiles
mapDistribute.C mapDistribute.C
mapDistributeTemplates.C
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
@ -62,6 +132,7 @@ SourceFiles
#include "Pstream.H" #include "Pstream.H"
#include "boolList.H" #include "boolList.H"
#include "Map.H" #include "Map.H"
#include "point.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -71,6 +142,7 @@ namespace Foam
class mapPolyMesh; class mapPolyMesh;
class globalIndex; class globalIndex;
class PstreamBuffers; class PstreamBuffers;
class globalIndexAndTransform;
/*---------------------------------------------------------------------------*\ /*---------------------------------------------------------------------------*\
Class mapDistribute Declaration Class mapDistribute Declaration
@ -89,6 +161,16 @@ class mapDistribute
//- Maps from subsetted data to new reconstructed data //- Maps from subsetted data to new reconstructed data
labelListList constructMap_; labelListList constructMap_;
// Optional transformation
//- For every globalIndexAndTransform::transformPermutations
// gives the elements that need to be transformed
labelListList transformElements_;
//- Destination in constructMap for transformed elements
labelList transformStart_;
//- Schedule //- Schedule
mutable autoPtr<List<labelPair> > schedulePtr_; mutable autoPtr<List<labelPair> > schedulePtr_;
@ -102,10 +184,73 @@ class mapDistribute
const label receivedSize const label receivedSize
); );
void calcCompactAddressing
(
const globalIndex& globalNumbering,
const labelList& elements,
List<Map<label> >& compactMap
) const;
void calcCompactAddressing
(
const globalIndex& globalNumbering,
const labelListList& elements,
List<Map<label> >& compactMap
) const;
void exchangeAddressing
(
const globalIndex& globalNumbering,
labelList& elements,
List<Map<label> >& compactMap,
labelList& compactStart
);
void exchangeAddressing
(
const globalIndex& globalNumbering,
labelListList& elements,
List<Map<label> >& compactMap,
labelList& compactStart
);
//- Helper function: copy transformElements without transformation
template<class T>
void applyDummyTransforms(List<T>& field) const;
template<class T> //, class CombineOp>
void applyTransforms
(
const globalIndexAndTransform& globalTransforms,
List<T>& field,
const bool isPosition
//const CombineOp& cop
) const;
//- Helper function: copy transformElements without transformation
template<class T>
void applyDummyInverseTransforms(List<T>& field) const;
template<class T> //, class CombineOp>
void applyInverseTransforms
(
const globalIndexAndTransform& globalTransforms,
List<T>& field,
const bool isPosition
//const CombineOp& cop
) const;
public: public:
// Declare name of the class and its debug switch
ClassName("mapDistribute");
// Constructors // Constructors
//- Construct null
mapDistribute();
//- Construct from components //- Construct from components
mapDistribute mapDistribute
( (
@ -114,6 +259,16 @@ public:
const Xfer<labelListList>& constructMap const Xfer<labelListList>& constructMap
); );
//- Construct from components
mapDistribute
(
const label constructSize,
const Xfer<labelListList>& subMap,
const Xfer<labelListList>& constructMap,
const Xfer<labelListList>& transformElements,
const Xfer<labelList>& transformStart
);
//- Construct from reverse addressing: per data item the send //- Construct from reverse addressing: per data item the send
// processor and the receive processor. All processors get same data. // processor and the receive processor. All processors get same data.
mapDistribute mapDistribute
@ -143,6 +298,36 @@ public:
List<Map<label> >& compactMap List<Map<label> >& compactMap
); );
//- Construct from list of (possibly remote) untransformed elements
// in globalIndex numbering (or -1) and (possibly remote)
// transformded elements in globalIndexAndTransform numbering.
// Determines compact numbering (see above) and
// distribute map to get data into this ordering and renumbers the
// elements to be in compact numbering.
mapDistribute
(
const globalIndex&,
labelList& untransformedElements,
const globalIndexAndTransform&,
const labelPairList& transformedElements,
labelList& transformedIndices,
List<Map<label> >& compactMap
);
//- As above but with ListLists.
mapDistribute
(
const globalIndex&,
labelListList& cellCells,
const globalIndexAndTransform&,
const List<labelPairList>& transformedElements,
labelListList& transformedIndices,
List<Map<label> >& compactMap
);
//- Construct by transferring parameter content
mapDistribute(const Xfer<mapDistribute>&);
//- Construct copy //- Construct copy
mapDistribute(const mapDistribute&); mapDistribute(const mapDistribute&);
@ -187,6 +372,19 @@ public:
return constructMap_; return constructMap_;
} }
//- For every globalIndexAndTransform::transformPermutations
// gives the elements that need to be transformed
const labelListList& transformElements() const
{
return transformElements_;
}
//- Destination in constructMap for transformed elements
const labelList& transformStart() const
{
return transformStart_;
}
//- Calculate a schedule. See above. //- Calculate a schedule. See above.
static List<labelPair> schedule static List<labelPair> schedule
( (
@ -200,6 +398,12 @@ public:
// Other // Other
//- Transfer the contents of the argument and annul the argument.
void transfer(mapDistribute&);
//- Transfer contents to the Xfer container
Xfer<mapDistribute> xfer();
//- Helper for construct from globalIndex. Renumbers element //- Helper for construct from globalIndex. Renumbers element
// (in globalIndex numbering) into compact indices. // (in globalIndex numbering) into compact indices.
static label renumber static label renumber
@ -245,88 +449,36 @@ public:
//- Distribute data using default commsType. //- Distribute data using default commsType.
template<class T> template<class T>
void distribute(List<T>& fld) const void distribute(List<T>& fld, const bool dummyTransform = true)
{ const;
if (Pstream::defaultCommsType == Pstream::nonBlocking)
{ //- Same but with transforms
distribute template<class T>
( void distribute
Pstream::nonBlocking, (
List<labelPair>(), const globalIndexAndTransform&,
constructSize_, List<T>& fld,
subMap_, const bool isPosition
constructMap_, ) const;
fld
);
}
else if (Pstream::defaultCommsType == Pstream::scheduled)
{
distribute
(
Pstream::scheduled,
schedule(),
constructSize_,
subMap_,
constructMap_,
fld
);
}
else
{
distribute
(
Pstream::blocking,
List<labelPair>(),
constructSize_,
subMap_,
constructMap_,
fld
);
}
}
//- Reverse distribute data using default commsType. //- Reverse distribute data using default commsType.
template<class T> template<class T>
void reverseDistribute(const label constructSize, List<T>& fld) void reverseDistribute
const (
{ const label constructSize,
if (Pstream::defaultCommsType == Pstream::nonBlocking) List<T>&,
{ const bool dummyTransform = true
distribute ) const;
(
Pstream::nonBlocking, //- Same but with transforms
List<labelPair>(), template<class T>
constructSize, void reverseDistribute
constructMap_, (
subMap_, const globalIndexAndTransform&,
fld const label constructSize,
); List<T>& fld,
} const bool isPosition
else if (Pstream::defaultCommsType == Pstream::scheduled) ) const;
{
distribute
(
Pstream::scheduled,
schedule(),
constructSize,
constructMap_,
subMap_,
fld
);
}
else
{
distribute
(
Pstream::blocking,
List<labelPair>(),
constructSize,
constructMap_,
subMap_,
fld
);
}
}
//- Reverse distribute data using default commsType. //- Reverse distribute data using default commsType.
// Since constructSize might be larger than supplied size supply // Since constructSize might be larger than supplied size supply
@ -336,53 +488,20 @@ public:
( (
const label constructSize, const label constructSize,
const T& nullValue, const T& nullValue,
List<T>& fld List<T>& fld,
) const bool dummyTransform = true
const ) const;
{
if (Pstream::defaultCommsType == Pstream::nonBlocking) //- Same but with transforms
{ template<class T>
distribute void reverseDistribute
( (
Pstream::nonBlocking, const globalIndexAndTransform&,
List<labelPair>(), const label constructSize,
constructSize, const T& nullValue,
constructMap_, List<T>& fld,
subMap_, const bool isPosition
fld, ) const;
eqOp<T>(),
nullValue
);
}
else if (Pstream::defaultCommsType == Pstream::scheduled)
{
distribute
(
Pstream::scheduled,
schedule(),
constructSize,
constructMap_,
subMap_,
fld,
eqOp<T>(),
nullValue
);
}
else
{
distribute
(
Pstream::blocking,
List<labelPair>(),
constructSize,
constructMap_,
subMap_,
fld,
eqOp<T>(),
nullValue
);
}
}
//- Do all sends using PstreamBuffers //- Do all sends using PstreamBuffers
template<class T> template<class T>
@ -391,6 +510,9 @@ public:
template<class T> template<class T>
void receive(PstreamBuffers&, List<T>&) const; void receive(PstreamBuffers&, List<T>&) const;
//- Debug: print layout
void printLayout(Ostream& os) const;
//- Correct for topo change. //- Correct for topo change.
void updateMesh(const mapPolyMesh&) void updateMesh(const mapPolyMesh&)
{ {
@ -406,6 +528,24 @@ public:
}; };
//- Specialisation for transforms that can apply positional transform
template<>
void mapDistribute::applyTransforms
(
const globalIndexAndTransform& globalTransforms,
List<point>& field,
const bool isPosition
//const CombineOp& cop
) const;
template<> //, class CombineOp>
void mapDistribute::applyInverseTransforms
(
const globalIndexAndTransform& globalTransforms,
List<point>& field,
const bool isPosition
//const CombineOp& cop
) const;
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

359
src/OpenFOAM/meshes/polyMesh/mapPolyMesh/mapDistribute/mapDistributeTemplates.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -26,6 +26,8 @@ License
#include "Pstream.H" #include "Pstream.H"
#include "PstreamBuffers.H" #include "PstreamBuffers.H"
#include "PstreamCombineReduceOps.H" #include "PstreamCombineReduceOps.H"
#include "globalIndexAndTransform.H"
#include "transformField.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * // // * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
@ -774,4 +776,359 @@ void Foam::mapDistribute::receive(PstreamBuffers& pBufs, List<T>& field) const
} }
// In case of no transform: copy elements
template<class T>
void Foam::mapDistribute::applyDummyTransforms(List<T>& field) const
{
forAll(transformElements_, trafoI)
{
const labelList& elems = transformElements_[trafoI];
label n = transformStart_[trafoI];
forAll(elems, i)
{
field[n++] = field[elems[i]];
}
}
}
// In case of no transform: copy elements
template<class T>
void Foam::mapDistribute::applyDummyInverseTransforms(List<T>& field) const
{
forAll(transformElements_, trafoI)
{
const labelList& elems = transformElements_[trafoI];
label n = transformStart_[trafoI];
forAll(elems, i)
{
field[elems[i]] = field[n++];
}
}
}
// Calculate transformed elements.
template<class T> //, class CombineOp>
void Foam::mapDistribute::applyTransforms
(
const globalIndexAndTransform& globalTransforms,
List<T>& field,
const bool isPosition
//const CombineOp& cop
) const
{
if (isPosition)
{
FatalErrorIn
(
"mapDistribute::applyTransforms\n"
"(\n"
" const globalIndexAndTransform&,\n"
" List<T>&,\n"
" const bool\n"
") const\n"
) << "It does not make sense to apply position transformation"
<< " for anything else than pointFields."
<< abort(FatalError);
}
const List<vectorTensorTransform>& totalTransform =
globalTransforms.transformPermutations();
forAll(totalTransform, trafoI)
{
const vectorTensorTransform& vt = totalTransform[trafoI];
const labelList& elems = transformElements_[trafoI];
label n = transformStart_[trafoI];
// Could be optimised to avoid memory allocations
Field<T> transformFld(transform(vt.R(), Field<T>(field, elems)));
forAll(transformFld, i)
{
//cop(field[n++], transformFld[i]);
field[n++] = transformFld[i];
}
}
}
// Calculate transformed elements.
template<class T> //, class CombineOp>
void Foam::mapDistribute::applyInverseTransforms
(
const globalIndexAndTransform& globalTransforms,
List<T>& field,
const bool isPosition
//const CombineOp& cop
) const
{
if (isPosition)
{
FatalErrorIn
(
"mapDistribute::applyInverseTransforms\n"
"(\n"
" const globalIndexAndTransform&,\n"
" List<T>&,\n"
" const bool\n"
") const\n"
) << "It does not make sense to apply position transformation"
<< " for anything else than pointFields."
<< abort(FatalError);
}
const List<vectorTensorTransform>& totalTransform =
globalTransforms.transformPermutations();
forAll(totalTransform, trafoI)
{
const vectorTensorTransform& vt = totalTransform[trafoI];
const labelList& elems = transformElements_[trafoI];
label n = transformStart_[trafoI];
// Could be optimised to avoid memory allocations
Field<T> transformFld(SubField<T>(field, elems.size(), n));
transform(transformFld, vt.R().T(), transformFld);
forAll(transformFld, i)
{
//cop(field[elems[i]], transformFld[i]);
field[elems[i]] = transformFld[i];
}
}
}
//- Distribute data using default commsType.
template<class T>
void Foam::mapDistribute::distribute
(
List<T>& fld,
const bool dummyTransform
) const
{
if (Pstream::defaultCommsType == Pstream::nonBlocking)
{
distribute
(
Pstream::nonBlocking,
List<labelPair>(),
constructSize_,
subMap_,
constructMap_,
fld
);
}
else if (Pstream::defaultCommsType == Pstream::scheduled)
{
distribute
(
Pstream::scheduled,
schedule(),
constructSize_,
subMap_,
constructMap_,
fld
);
}
else
{
distribute
(
Pstream::blocking,
List<labelPair>(),
constructSize_,
subMap_,
constructMap_,
fld
);
}
//- Fill in transformed slots with copies
if (dummyTransform)
{
applyDummyTransforms(fld);
}
}
//- Reverse distribute data using default commsType.
template<class T>
void Foam::mapDistribute::reverseDistribute
(
const label constructSize,
List<T>& fld,
const bool dummyTransform
) const
{
fld.setSize(constructSize);
if (dummyTransform)
{
applyDummyInverseTransforms(fld);
}
if (Pstream::defaultCommsType == Pstream::nonBlocking)
{
distribute
(
Pstream::nonBlocking,
List<labelPair>(),
constructSize,
constructMap_,
subMap_,
fld
);
}
else if (Pstream::defaultCommsType == Pstream::scheduled)
{
distribute
(
Pstream::scheduled,
schedule(),
constructSize,
constructMap_,
subMap_,
fld
);
}
else
{
distribute
(
Pstream::blocking,
List<labelPair>(),
constructSize,
constructMap_,
subMap_,
fld
);
}
}
//- Reverse distribute data using default commsType.
// Since constructSize might be larger than supplied size supply
// a nullValue
template<class T>
void Foam::mapDistribute::reverseDistribute
(
const label constructSize,
const T& nullValue,
List<T>& fld,
const bool dummyTransform
) const
{
fld.setSize(constructSize);
if (dummyTransform)
{
applyDummyInverseTransforms(fld);
}
if (Pstream::defaultCommsType == Pstream::nonBlocking)
{
distribute
(
Pstream::nonBlocking,
List<labelPair>(),
constructSize,
constructMap_,
subMap_,
fld,
eqOp<T>(),
nullValue
);
}
else if (Pstream::defaultCommsType == Pstream::scheduled)
{
distribute
(
Pstream::scheduled,
schedule(),
constructSize,
constructMap_,
subMap_,
fld,
eqOp<T>(),
nullValue
);
}
else
{
distribute
(
Pstream::blocking,
List<labelPair>(),
constructSize,
constructMap_,
subMap_,
fld,
eqOp<T>(),
nullValue
);
}
}
//- Distribute data using default commsType.
template<class T>
void Foam::mapDistribute::distribute
(
const globalIndexAndTransform& git,
List<T>& fld,
const bool isPosition
) const
{
// Distribute. Leave out dummy transforms since we're doing them ourselves
distribute(fld, false);
// Do transforms
applyTransforms(git, fld, isPosition); //, eqOp<T>());
}
template<class T>
void Foam::mapDistribute::reverseDistribute
(
const globalIndexAndTransform& git,
const label constructSize,
List<T>& fld,
const bool isPosition
) const
{
// Fill slots with reverse-transformed data. Note that it also copies
// back into the non-remote part of fld even though these values are not
// used.
applyInverseTransforms(git, fld, isPosition); //, eqOp<T>());
// And send back (the remote slots). Disable dummy transformations.
reverseDistribute(constructSize, fld, false);
}
template<class T>
void Foam::mapDistribute::reverseDistribute
(
const globalIndexAndTransform& git,
const label constructSize,
const T& nullValue,
List<T>& fld,
const bool isPosition
) const
{
// Fill slots with reverse-transformed data Note that it also copies
// back into the non-remote part of fld even though these values are not
// used.
applyInverseTransforms(git, fld, isPosition); //, eqOp<T>());
// And send back (the remote slots) Disable dummy transformations.
reverseDistribute(constructSize, nullValue, fld, false);
}
// ************************************************************************* // // ************************************************************************* //

15
src/OpenFOAM/meshes/polyMesh/polyBoundaryMesh/polyBoundaryMesh.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -673,6 +673,8 @@ bool Foam::polyBoundaryMesh::checkDefinition(const bool report) const
bool hasError = false; bool hasError = false;
HashSet<word> patchNames(2*size());
forAll(bm, patchI) forAll(bm, patchI)
{ {
if (bm[patchI].start() != nextPatchStart && !hasError) if (bm[patchI].start() != nextPatchStart && !hasError)
@ -689,6 +691,17 @@ bool Foam::polyBoundaryMesh::checkDefinition(const bool report) const
<< " Suppressing future warnings." << endl; << " Suppressing future warnings." << endl;
} }
if (!patchNames.insert(bm[patchI].name()) && !hasError)
{
hasError = true;
Info<< " ****Duplicate boundary patch " << patchI
<< " named " << bm[patchI].name()
<< " of type " << bm[patchI].type()
<< "." << endl
<< "Suppressing future warnings." << endl;
}
nextPatchStart += bm[patchI].size(); nextPatchStart += bm[patchI].size();
} }

3
src/OpenFOAM/meshes/polyMesh/polyBoundaryMesh/polyBoundaryMesh.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -45,7 +45,6 @@ SourceFiles
namespace Foam namespace Foam
{ {
typedef List<labelPair> labelPairList;
class polyMesh; class polyMesh;
// Forward declaration of friend functions and operators // Forward declaration of friend functions and operators

52
src/OpenFOAM/meshes/polyMesh/polyPatches/constraint/cyclic/cyclicPolyPatch.C
View File

@ -276,9 +276,16 @@ void Foam::cyclicPolyPatch::calcTransforms
if (transform_ == ROTATIONAL && !parallel() && forwardT().size() > 1) if (transform_ == ROTATIONAL && !parallel() && forwardT().size() > 1)
{ {
const_cast<tensorField&>(forwardT()).setSize(1); // Get index of maximum area face to minimise truncation errors.
const_cast<tensorField&>(reverseT()).setSize(1); label max0I = findMaxArea(half0.points(), half0);
const tensor fwdT = forwardT()[max0I];
const_cast<tensorField&>(forwardT()) = tensorField(1, fwdT);
const tensor revT = reverseT()[max0I];
const_cast<tensorField&>(reverseT()) = tensorField(1, revT);
const bool coll = collocated()[max0I];
const_cast<boolList&>(collocated()).setSize(1); const_cast<boolList&>(collocated()).setSize(1);
const_cast<boolList&>(collocated())[0] = coll;
WarningIn WarningIn
( (
@ -293,8 +300,9 @@ void Foam::cyclicPolyPatch::calcTransforms
) << "For patch " << name() ) << "For patch " << name()
<< " calculated non-uniform transform tensor even though" << " calculated non-uniform transform tensor even though"
<< " the transform type is " << transformTypeNames[transform_] << " the transform type is " << transformTypeNames[transform_]
<< ". Setting the transformation tensor to be a uniform" << "." << nl
<< " rotation." << " Setting the transformation tensor to be a uniform"
<< " rotation calculated from face " << max0I
<< endl; << endl;
} }
} }
@ -695,9 +703,43 @@ Foam::cyclicPolyPatch::~cyclicPolyPatch()
} }
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::label Foam::cyclicPolyPatch::neighbPatchID() const
{
if (neighbPatchID_ == -1)
{
neighbPatchID_ = this->boundaryMesh().findPatchID(neighbPatchName_);
if (neighbPatchID_ == -1)
{
FatalErrorIn("cyclicPolyPatch::neighbPatchID() const")
<< "Illegal neighbourPatch name " << neighbPatchName_
<< endl << "Valid patch names are "
<< this->boundaryMesh().names()
<< exit(FatalError);
}
// Check that it is a cyclic
const cyclicPolyPatch& nbrPatch = refCast<const cyclicPolyPatch>
(
this->boundaryMesh()[neighbPatchID_]
);
if (nbrPatch.neighbPatchName() != name())
{
WarningIn("cyclicPolyPatch::neighbPatchID() const")
<< "Patch " << name()
<< " specifies neighbour patch " << neighbPatchName()
<< endl << " but that in return specifies "
<< nbrPatch.neighbPatchName()
<< endl;
}
}
return neighbPatchID_;
}
void Foam::cyclicPolyPatch::transformPosition(pointField& l) const void Foam::cyclicPolyPatch::transformPosition(pointField& l) const
{ {
if (!parallel()) if (!parallel())

26
src/OpenFOAM/meshes/polyMesh/polyPatches/constraint/cyclic/cyclicPolyPatch.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -197,6 +197,10 @@ protected:
public: public:
//- Declare friendship with processorCyclicPolyPatch
friend class processorCyclicPolyPatch;
//- Runtime type information //- Runtime type information
TypeName("cyclic"); TypeName("cyclic");
@ -321,25 +325,7 @@ public:
} }
//- Neighbour patchID. //- Neighbour patchID.
virtual label neighbPatchID() const virtual label neighbPatchID() const;
{
if (neighbPatchID_ == -1)
{
neighbPatchID_ = this->boundaryMesh().findPatchID
(
neighbPatchName_
);
if (neighbPatchID_ == -1)
{
FatalErrorIn("cyclicPolyPatch::neighbPatchID() const")
<< "Illegal neighbourPatch name " << neighbPatchName_
<< endl << "Valid patch names are "
<< this->boundaryMesh().names()
<< exit(FatalError);
}
}
return neighbPatchID_;
}
virtual bool owner() const virtual bool owner() const
{ {

22
src/OpenFOAM/meshes/polyMesh/polyPatches/constraint/processorCyclic/processorCyclicPolyPatch.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -26,6 +26,7 @@ License
#include "processorCyclicPolyPatch.H" #include "processorCyclicPolyPatch.H"
#include "addToRunTimeSelectionTable.H" #include "addToRunTimeSelectionTable.H"
#include "SubField.H" #include "SubField.H"
#include "cyclicPolyPatch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -171,9 +172,9 @@ void Foam::processorCyclicPolyPatch::calcGeometry(PstreamBuffers& pBufs)
// - or do we not auto-calculate the transformation but // - or do we not auto-calculate the transformation but
// have option of reading it. // have option of reading it.
// Update underlying cyclic // Update underlying cyclic halves. Need to do both since only one
// half might be present as a processorCyclic.
coupledPolyPatch& pp = const_cast<coupledPolyPatch&>(referPatch()); coupledPolyPatch& pp = const_cast<coupledPolyPatch&>(referPatch());
pp.calcGeometry pp.calcGeometry
( (
*this, *this,
@ -184,6 +185,21 @@ void Foam::processorCyclicPolyPatch::calcGeometry(PstreamBuffers& pBufs)
neighbFaceAreas(), neighbFaceAreas(),
neighbFaceCellCentres() neighbFaceCellCentres()
); );
if (isA<cyclicPolyPatch>(pp))
{
const cyclicPolyPatch& cpp = refCast<const cyclicPolyPatch>(pp);
const_cast<cyclicPolyPatch&>(cpp.neighbPatch()).calcGeometry
(
*this,
neighbFaceCentres(),
neighbFaceAreas(),
neighbFaceCellCentres(),
faceCentres(),
faceAreas(),
faceCellCentres()
);
}
} }
} }

47
src/OpenFOAM/meshes/polyMesh/syncTools/syncTools.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -24,7 +24,6 @@ License
\*----------------------------------------------------------------------------*/ \*----------------------------------------------------------------------------*/
#include "syncTools.H" #include "syncTools.H"
#include "polyMesh.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * // // * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
@ -99,24 +98,6 @@ void Foam::syncTools::transform::operator()
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * // // * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
// Does anyone have couples? Since meshes might have 0 cells and 0 proc
// boundaries need to reduce this info.
bool Foam::syncTools::hasCouples(const polyBoundaryMesh& patches)
{
bool hasAnyCouples = false;
forAll(patches, patchI)
{
if (patches[patchI].coupled())
{
hasAnyCouples = true;
break;
}
}
return returnReduce(hasAnyCouples, orOp<bool>());
}
// Determines for every point whether it is coupled and if so sets only one. // Determines for every point whether it is coupled and if so sets only one.
Foam::PackedBoolList Foam::syncTools::getMasterPoints(const polyMesh& mesh) Foam::PackedBoolList Foam::syncTools::getMasterPoints(const polyMesh& mesh)
{ {
@ -125,12 +106,21 @@ Foam::PackedBoolList Foam::syncTools::getMasterPoints(const polyMesh& mesh)
const globalMeshData& globalData = mesh.globalData(); const globalMeshData& globalData = mesh.globalData();
const labelList& meshPoints = globalData.coupledPatch().meshPoints(); const labelList& meshPoints = globalData.coupledPatch().meshPoints();
const labelListList& pointSlaves = globalData.globalPointAllSlaves(); const labelListList& slaves = globalData.globalPointSlaves();
const labelListList& transformedSlaves =
globalData.globalPointTransformedSlaves();
forAll(meshPoints, coupledPointI) forAll(meshPoints, coupledPointI)
{ {
label meshPointI = meshPoints[coupledPointI]; label meshPointI = meshPoints[coupledPointI];
if (pointSlaves[coupledPointI].size() > 0) if
(
(
slaves[coupledPointI].size()
+ transformedSlaves[coupledPointI].size()
)
> 0
)
{ {
isMasterPoint[meshPointI] = true; isMasterPoint[meshPointI] = true;
} }
@ -161,12 +151,21 @@ Foam::PackedBoolList Foam::syncTools::getMasterEdges(const polyMesh& mesh)
const globalMeshData& globalData = mesh.globalData(); const globalMeshData& globalData = mesh.globalData();
const labelList& meshEdges = globalData.coupledPatchMeshEdges(); const labelList& meshEdges = globalData.coupledPatchMeshEdges();
const labelListList& edgeSlaves = globalData.globalEdgeAllSlaves(); const labelListList& slaves = globalData.globalEdgeSlaves();
const labelListList& transformedSlaves =
globalData.globalEdgeTransformedSlaves();
forAll(meshEdges, coupledEdgeI) forAll(meshEdges, coupledEdgeI)
{ {
label meshEdgeI = meshEdges[coupledEdgeI]; label meshEdgeI = meshEdges[coupledEdgeI];
if (edgeSlaves[coupledEdgeI].size() > 0) if
(
(
slaves[coupledEdgeI].size()
+ transformedSlaves[coupledEdgeI].size()
)
> 0
)
{ {
isMasterEdge[meshEdgeI] = true; isMasterEdge[meshEdgeI] = true;
} }

133
src/OpenFOAM/meshes/polyMesh/syncTools/syncTools.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -33,12 +33,6 @@ Description
- null value which gets overridden by any valid value. - null value which gets overridden by any valid value.
- transform function - transform function
note:Can apply coordinate rotation/separation on cyclics but only for faces
or if there is a single rotation/separation tensor.
note:syncPointList or syncEdgeList will visit shared points/edges
multiple times (once through patch exchange, once through shared
points reduce). Should be replaced by pointMesh functionality.
SourceFiles SourceFiles
syncTools.C syncTools.C
syncToolsTemplates.C syncToolsTemplates.C
@ -48,9 +42,7 @@ SourceFiles
#ifndef syncTools_H #ifndef syncTools_H
#define syncTools_H #define syncTools_H
#include "UList.H"
#include "Pstream.H" #include "Pstream.H"
#include "Map.H"
#include "EdgeMap.H" #include "EdgeMap.H"
#include "PackedBoolList.H" #include "PackedBoolList.H"
#include "polyMesh.H" #include "polyMesh.H"
@ -72,9 +64,6 @@ class syncTools
{ {
// Private Member Functions // Private Member Functions
//- Check whether uses couples.
static bool hasCouples(const polyBoundaryMesh&);
//- Combine value with existing value in map. //- Combine value with existing value in map.
template <class T, class CombineOp> template <class T, class CombineOp>
static void combine static void combine
@ -174,41 +163,41 @@ public:
const CombineOp& cop, const CombineOp& cop,
const TransformOp& top const TransformOp& top
); );
//
//- Synchronize values on all mesh points. // //- Synchronize values on all mesh points.
template <class T, class CombineOp, class TransformOp> // template <class T, class CombineOp, class TransformOp>
static void syncPointList // static void syncPointList
( // (
const polyMesh&, // const polyMesh&,
UList<T>&, // UList<T>&,
const CombineOp& cop, // const CombineOp& cop,
const T& nullValue, // const T& nullValue,
const TransformOp& top // const TransformOp& top
); // );
//
//- Synchronize values on selected mesh points. // //- Synchronize values on selected mesh points.
template <class T, class CombineOp, class TransformOp> // template <class T, class CombineOp, class TransformOp>
static void syncPointList // static void syncPointList
( // (
const polyMesh&, // const polyMesh&,
const labelList& meshPoints, // const labelList& meshPoints,
UList<T>&, // UList<T>&,
const CombineOp& cop, // const CombineOp& cop,
const T& nullValue, // const T& nullValue,
const TransformOp& top // const TransformOp& top
); // );
//
//- Synchronize values on all mesh edges. // //- Synchronize values on all mesh edges.
template <class T, class CombineOp, class TransformOp> // template <class T, class CombineOp, class TransformOp>
static void syncEdgeList // static void syncEdgeList
( // (
const polyMesh&, // const polyMesh&,
UList<T>&, // UList<T>&,
const CombineOp& cop, // const CombineOp& cop,
const T& nullValue, // const T& nullValue,
const TransformOp& top // const TransformOp& top
); // );
//
//- Synchronize values on boundary faces only. //- Synchronize values on boundary faces only.
template <class T, class CombineOp, class TransformOp> template <class T, class CombineOp, class TransformOp>
static void syncBoundaryFaceList static void syncBoundaryFaceList
@ -227,26 +216,20 @@ public:
static void syncPointList static void syncPointList
( (
const polyMesh& mesh, const polyMesh& mesh,
UList<T>& l, List<T>& l,
const CombineOp& cop, const CombineOp& cop,
const T& nullValue const T& nullValue
) );
{
syncPointList(mesh, l, cop, nullValue, transform());
}
//- Synchronize locations on all mesh points. //- Synchronize locations on all mesh points.
template <class CombineOp> template <class CombineOp>
static void syncPointPositions static void syncPointPositions
( (
const polyMesh& mesh, const polyMesh& mesh,
UList<point>& l, List<point>& l,
const CombineOp& cop, const CombineOp& cop,
const point& nullValue const point& nullValue
) );
{
syncPointList(mesh, l, cop, nullValue, transformPosition());
}
//- Synchronize values on selected mesh points. //- Synchronize values on selected mesh points.
template <class T, class CombineOp> template <class T, class CombineOp>
@ -257,18 +240,7 @@ public:
UList<T>& l, UList<T>& l,
const CombineOp& cop, const CombineOp& cop,
const T& nullValue const T& nullValue
) );
{
syncPointList
(
mesh,
meshPoints,
l,
cop,
nullValue,
transform()
);
}
//- Synchronize locations on selected mesh points. //- Synchronize locations on selected mesh points.
template <class CombineOp> template <class CombineOp>
@ -279,18 +251,7 @@ public:
UList<point>& l, UList<point>& l,
const CombineOp& cop, const CombineOp& cop,
const point& nullValue const point& nullValue
) );
{
syncPointList
(
mesh,
meshPoints,
l,
cop,
nullValue,
transformPosition()
);
}
// Synchronise edge-wise data // Synchronise edge-wise data
@ -303,10 +264,7 @@ public:
UList<T>& l, UList<T>& l,
const CombineOp& cop, const CombineOp& cop,
const T& nullValue const T& nullValue
) );
{
syncEdgeList(mesh, l, cop, nullValue, transform());
}
//- Synchronize values on all mesh edges. //- Synchronize values on all mesh edges.
template <class CombineOp> template <class CombineOp>
@ -316,10 +274,7 @@ public:
UList<point>& l, UList<point>& l,
const CombineOp& cop, const CombineOp& cop,
const point& nullValue const point& nullValue
) );
{
syncEdgeList(mesh, l, cop, nullValue, transformPosition());
}
// Synchronise face-wise data // Synchronise face-wise data

771
src/OpenFOAM/meshes/polyMesh/syncTools/syncToolsTemplates.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -32,8 +32,6 @@ License
#include "transform.H" #include "transform.H"
#include "transformList.H" #include "transformList.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * // // * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
// Combine val with existing value at index // Combine val with existing value at index
@ -93,11 +91,6 @@ void Foam::syncTools::syncPointMap
{ {
const polyBoundaryMesh& patches = mesh.boundaryMesh(); const polyBoundaryMesh& patches = mesh.boundaryMesh();
if (!hasCouples(patches))
{
return;
}
if (Pstream::parRun()) if (Pstream::parRun())
{ {
PstreamBuffers pBufs(Pstream::nonBlocking); PstreamBuffers pBufs(Pstream::nonBlocking);
@ -398,11 +391,6 @@ void Foam::syncTools::syncEdgeMap
{ {
const polyBoundaryMesh& patches = mesh.boundaryMesh(); const polyBoundaryMesh& patches = mesh.boundaryMesh();
if (!hasCouples(patches))
{
return;
}
// Do synchronisation without constructing globalEdge addressing // Do synchronisation without constructing globalEdge addressing
// (since this constructs mesh edge addressing) // (since this constructs mesh edge addressing)
@ -767,14 +755,232 @@ void Foam::syncTools::syncEdgeMap
} }
template <class T, class CombineOp, class TransformOp> //template <class T, class CombineOp, class TransformOp>
//void Foam::syncTools::syncPointList
//(
// const polyMesh& mesh,
// UList<T>& pointValues,
// const CombineOp& cop,
// const T& nullValue,
// const TransformOp& top
//)
//{
// if (pointValues.size() != mesh.nPoints())
// {
// FatalErrorIn
// (
// "syncTools<class T, class CombineOp>::syncPointList"
// "(const polyMesh&, UList<T>&, const CombineOp&, const T&"
// ", const bool)"
// ) << "Number of values " << pointValues.size()
// << " is not equal to the number of points in the mesh "
// << mesh.nPoints() << abort(FatalError);
// }
//
// const polyBoundaryMesh& patches = mesh.boundaryMesh();
//
//
// if (Pstream::parRun())
// {
// PstreamBuffers pBufs(Pstream::nonBlocking);
//
// // Send
//
// forAll(patches, patchI)
// {
// if
// (
// isA<processorPolyPatch>(patches[patchI])
// && patches[patchI].nPoints() > 0
// )
// {
// const processorPolyPatch& procPatch =
// refCast<const processorPolyPatch>(patches[patchI]);
//
// // Get data per patchPoint in neighbouring point numbers.
// Field<T> patchInfo(procPatch.nPoints());
//
// const labelList& meshPts = procPatch.meshPoints();
// const labelList& nbrPts = procPatch.neighbPoints();
//
// forAll(nbrPts, pointI)
// {
// label nbrPointI = nbrPts[pointI];
// patchInfo[nbrPointI] = pointValues[meshPts[pointI]];
// }
//
// UOPstream toNbr(procPatch.neighbProcNo(), pBufs);
// toNbr << patchInfo;
// }
// }
//
// pBufs.finishedSends();
//
// // Receive and combine.
//
// forAll(patches, patchI)
// {
// if
// (
// isA<processorPolyPatch>(patches[patchI])
// && patches[patchI].nPoints() > 0
// )
// {
// const processorPolyPatch& procPatch =
// refCast<const processorPolyPatch>(patches[patchI]);
//
// Field<T> nbrPatchInfo(procPatch.nPoints());
// {
// UIPstream fromNbr(procPatch.neighbProcNo(), pBufs);
// fromNbr >> nbrPatchInfo;
// }
//
// // Transform to this side
// top(procPatch, nbrPatchInfo);
//
// const labelList& meshPts = procPatch.meshPoints();
//
// forAll(meshPts, pointI)
// {
// label meshPointI = meshPts[pointI];
// cop(pointValues[meshPointI], nbrPatchInfo[pointI]);
// }
// }
// }
// }
//
// // Do the cyclics.
// forAll(patches, patchI)
// {
// if (isA<cyclicPolyPatch>(patches[patchI]))
// {
// const cyclicPolyPatch& cycPatch =
// refCast<const cyclicPolyPatch>(patches[patchI]);
//
// if (cycPatch.owner())
// {
// // Owner does all.
//
// const edgeList& coupledPoints = cycPatch.coupledPoints();
// const labelList& meshPts = cycPatch.meshPoints();
// const cyclicPolyPatch& nbrPatch = cycPatch.neighbPatch();
// const labelList& nbrMeshPoints = nbrPatch.meshPoints();
//
// Field<T> half0Values(coupledPoints.size());
// Field<T> half1Values(coupledPoints.size());
//
// forAll(coupledPoints, i)
// {
// const edge& e = coupledPoints[i];
// half0Values[i] = pointValues[meshPts[e[0]]];
// half1Values[i] = pointValues[nbrMeshPoints[e[1]]];
// }
//
// //SubField<T> slice0(half0Values, half0Values.size());
// //SubField<T> slice1(half1Values, half1Values.size());
// //top(cycPatch, reinterpret_cast<Field<T>&>(slice1));
// //top(nbrPatch, reinterpret_cast<Field<T>&>(slice0));
//
// top(cycPatch, half1Values);
// top(nbrPatch, half0Values);
//
// forAll(coupledPoints, i)
// {
// const edge& e = coupledPoints[i];
// cop(pointValues[meshPts[e[0]]], half1Values[i]);
// cop(pointValues[nbrMeshPoints[e[1]]], half0Values[i]);
// }
// }
// }
// }
//
// // Synchronize multiple shared points.
// const globalMeshData& pd = mesh.globalData();
//
// if (pd.nGlobalPoints() > 0)
// {
// // Values on shared points.
// Field<T> sharedPts(pd.nGlobalPoints(), nullValue);
//
// forAll(pd.sharedPointLabels(), i)
// {
// label meshPointI = pd.sharedPointLabels()[i];
// // Fill my entries in the shared points
// sharedPts[pd.sharedPointAddr()[i]] = pointValues[meshPointI];
// }
//
// // Combine on master.
// Pstream::listCombineGather(sharedPts, cop);
// Pstream::listCombineScatter(sharedPts);
//
// // Now we will all have the same information. Merge it back with
// // my local information.
// forAll(pd.sharedPointLabels(), i)
// {
// label meshPointI = pd.sharedPointLabels()[i];
// pointValues[meshPointI] = sharedPts[pd.sharedPointAddr()[i]];
// }
// }
//}
//template <class T, class CombineOp, class TransformOp>
//void Foam::syncTools::syncPointList
//(
// const polyMesh& mesh,
// const labelList& meshPoints,
// UList<T>& pointValues,
// const CombineOp& cop,
// const T& nullValue,
// const TransformOp& top
//)
//{
// if (pointValues.size() != meshPoints.size())
// {
// FatalErrorIn
// (
// "syncTools<class T, class CombineOp>::syncPointList"
// "(const polyMesh&, const labelList&, UList<T>&, const CombineOp&"
// ", const T&, const bool)"
// ) << "Number of values " << pointValues.size()
// << " is not equal to the number of points "
// << meshPoints.size() << abort(FatalError);
// }
//
// if (!hasCouples(mesh.boundaryMesh()))
// {
// return;
// }
//
// Field<T> meshValues(mesh.nPoints(), nullValue);
//
// forAll(meshPoints, i)
// {
// meshValues[meshPoints[i]] = pointValues[i];
// }
//
// syncTools::syncPointList
// (
// mesh,
// meshValues,
// cop, // combine op
// nullValue, // null value
// top // position or field
// );
//
// forAll(meshPoints, i)
// {
// pointValues[i] = meshValues[meshPoints[i]];
// }
//}
template <class T, class CombineOp>
void Foam::syncTools::syncPointList void Foam::syncTools::syncPointList
( (
const polyMesh& mesh, const polyMesh& mesh,
UList<T>& pointValues, List<T>& pointValues,
const CombineOp& cop, const CombineOp& cop,
const T& nullValue, const T& nullValue
const TransformOp& top
) )
{ {
if (pointValues.size() != mesh.nPoints()) if (pointValues.size() != mesh.nPoints())
@ -782,173 +988,48 @@ void Foam::syncTools::syncPointList
FatalErrorIn FatalErrorIn
( (
"syncTools<class T, class CombineOp>::syncPointList" "syncTools<class T, class CombineOp>::syncPointList"
"(const polyMesh&, UList<T>&, const CombineOp&, const T&" "(const polyMesh&, UList<T>&, const CombineOp&, const T&)"
", const bool)"
) << "Number of values " << pointValues.size() ) << "Number of values " << pointValues.size()
<< " is not equal to the number of points in the mesh " << " is not equal to the number of points in the mesh "
<< mesh.nPoints() << abort(FatalError); << mesh.nPoints() << abort(FatalError);
} }
const polyBoundaryMesh& patches = mesh.boundaryMesh(); mesh.globalData().syncPointData(pointValues, cop, false);
if (!hasCouples(patches))
{
return;
}
if (Pstream::parRun())
{
PstreamBuffers pBufs(Pstream::nonBlocking);
// Send
forAll(patches, patchI)
{
if
(
isA<processorPolyPatch>(patches[patchI])
&& patches[patchI].nPoints() > 0
)
{
const processorPolyPatch& procPatch =
refCast<const processorPolyPatch>(patches[patchI]);
// Get data per patchPoint in neighbouring point numbers.
Field<T> patchInfo(procPatch.nPoints());
const labelList& meshPts = procPatch.meshPoints();
const labelList& nbrPts = procPatch.neighbPoints();
forAll(nbrPts, pointI)
{
label nbrPointI = nbrPts[pointI];
patchInfo[nbrPointI] = pointValues[meshPts[pointI]];
}
UOPstream toNbr(procPatch.neighbProcNo(), pBufs);
toNbr << patchInfo;
}
}
pBufs.finishedSends();
// Receive and combine.
forAll(patches, patchI)
{
if
(
isA<processorPolyPatch>(patches[patchI])
&& patches[patchI].nPoints() > 0
)
{
const processorPolyPatch& procPatch =
refCast<const processorPolyPatch>(patches[patchI]);
Field<T> nbrPatchInfo(procPatch.nPoints());
{
UIPstream fromNbr(procPatch.neighbProcNo(), pBufs);
fromNbr >> nbrPatchInfo;
}
// Transform to this side
top(procPatch, nbrPatchInfo);
const labelList& meshPts = procPatch.meshPoints();
forAll(meshPts, pointI)
{
label meshPointI = meshPts[pointI];
cop(pointValues[meshPointI], nbrPatchInfo[pointI]);
}
}
}
}
// Do the cyclics.
forAll(patches, patchI)
{
if (isA<cyclicPolyPatch>(patches[patchI]))
{
const cyclicPolyPatch& cycPatch =
refCast<const cyclicPolyPatch>(patches[patchI]);
if (cycPatch.owner())
{
// Owner does all.
const edgeList& coupledPoints = cycPatch.coupledPoints();
const labelList& meshPts = cycPatch.meshPoints();
const cyclicPolyPatch& nbrPatch = cycPatch.neighbPatch();
const labelList& nbrMeshPoints = nbrPatch.meshPoints();
Field<T> half0Values(coupledPoints.size());
Field<T> half1Values(coupledPoints.size());
forAll(coupledPoints, i)
{
const edge& e = coupledPoints[i];
half0Values[i] = pointValues[meshPts[e[0]]];
half1Values[i] = pointValues[nbrMeshPoints[e[1]]];
}
//SubField<T> slice0(half0Values, half0Values.size());
//SubField<T> slice1(half1Values, half1Values.size());
//top(cycPatch, reinterpret_cast<Field<T>&>(slice1));
//top(nbrPatch, reinterpret_cast<Field<T>&>(slice0));
top(cycPatch, half1Values);
top(nbrPatch, half0Values);
forAll(coupledPoints, i)
{
const edge& e = coupledPoints[i];
cop(pointValues[meshPts[e[0]]], half1Values[i]);
cop(pointValues[nbrMeshPoints[e[1]]], half0Values[i]);
}
}
}
}
// Synchronize multiple shared points.
const globalMeshData& pd = mesh.globalData();
if (pd.nGlobalPoints() > 0)
{
// Values on shared points.
Field<T> sharedPts(pd.nGlobalPoints(), nullValue);
forAll(pd.sharedPointLabels(), i)
{
label meshPointI = pd.sharedPointLabels()[i];
// Fill my entries in the shared points
sharedPts[pd.sharedPointAddr()[i]] = pointValues[meshPointI];
}
// Combine on master.
Pstream::listCombineGather(sharedPts, cop);
Pstream::listCombineScatter(sharedPts);
// Now we will all have the same information. Merge it back with
// my local information.
forAll(pd.sharedPointLabels(), i)
{
label meshPointI = pd.sharedPointLabels()[i];
pointValues[meshPointI] = sharedPts[pd.sharedPointAddr()[i]];
}
}
} }
template <class T, class CombineOp, class TransformOp> template <class CombineOp>
void Foam::syncTools::syncPointPositions
(
const polyMesh& mesh,
List<point>& pointValues,
const CombineOp& cop,
const point& nullValue
)
{
if (pointValues.size() != mesh.nPoints())
{
FatalErrorIn
(
"syncTools<class CombineOp>::syncPointPositions"
"(const polyMesh&, List<point>&, const CombineOp&, const point&)"
) << "Number of values " << pointValues.size()
<< " is not equal to the number of points in the mesh "
<< mesh.nPoints() << abort(FatalError);
}
mesh.globalData().syncPointData(pointValues, cop, true);
}
template <class T, class CombineOp>
void Foam::syncTools::syncPointList void Foam::syncTools::syncPointList
( (
const polyMesh& mesh, const polyMesh& mesh,
const labelList& meshPoints, const labelList& meshPoints,
UList<T>& pointValues, UList<T>& pointValues,
const CombineOp& cop, const CombineOp& cop,
const T& nullValue, const T& nullValue
const TransformOp& top
) )
{ {
if (pointValues.size() != meshPoints.size()) if (pointValues.size() != meshPoints.size())
@ -956,49 +1037,116 @@ void Foam::syncTools::syncPointList
FatalErrorIn FatalErrorIn
( (
"syncTools<class T, class CombineOp>::syncPointList" "syncTools<class T, class CombineOp>::syncPointList"
"(const polyMesh&, const labelList&, UList<T>&, const CombineOp&" "(const polyMesh&, UList<T>&, const CombineOp&, const T&)"
", const T&, const bool)"
) << "Number of values " << pointValues.size() ) << "Number of values " << pointValues.size()
<< " is not equal to the number of points " << " is not equal to the number of meshPoints "
<< meshPoints.size() << abort(FatalError); << meshPoints.size() << abort(FatalError);
} }
const globalMeshData& gd = mesh.globalData();
const indirectPrimitivePatch& cpp = gd.coupledPatch();
const Map<label>& mpm = cpp.meshPointMap();
if (!hasCouples(mesh.boundaryMesh())) List<T> cppFld(cpp.nPoints(), nullValue);
{
return;
}
Field<T> meshValues(mesh.nPoints(), nullValue);
forAll(meshPoints, i) forAll(meshPoints, i)
{ {
meshValues[meshPoints[i]] = pointValues[i]; label pointI = meshPoints[i];
Map<label>::const_iterator iter = mpm.find(pointI);
if (iter != mpm.end())
{
cppFld[iter()] = pointValues[i];
}
} }
syncTools::syncPointList globalMeshData::syncData
( (
mesh, cppFld,
meshValues, gd.globalPointSlaves(),
cop, // combine op gd.globalPointTransformedSlaves(),
nullValue, // null value gd.globalPointSlavesMap(),
top // position or field gd.globalTransforms(),
cop,
false //position?
); );
forAll(meshPoints, i) forAll(meshPoints, i)
{ {
pointValues[i] = meshValues[meshPoints[i]]; label pointI = meshPoints[i];
Map<label>::const_iterator iter = mpm.find(pointI);
if (iter != mpm.end())
{
pointValues[i] = cppFld[iter()];
}
} }
} }
template <class T, class CombineOp, class TransformOp> template <class CombineOp>
void Foam::syncTools::syncPointPositions
(
const polyMesh& mesh,
const labelList& meshPoints,
UList<point>& pointValues,
const CombineOp& cop,
const point& nullValue
)
{
if (pointValues.size() != meshPoints.size())
{
FatalErrorIn
(
"syncTools<class CombineOp>::syncPointList"
"(const polyMesh&, UList<point>&, const CombineOp&, const point&)"
) << "Number of values " << pointValues.size()
<< " is not equal to the number of meshPoints "
<< meshPoints.size() << abort(FatalError);
}
const globalMeshData& gd = mesh.globalData();
const indirectPrimitivePatch& cpp = gd.coupledPatch();
const Map<label>& mpm = cpp.meshPointMap();
List<point> cppFld(cpp.nPoints(), nullValue);
forAll(meshPoints, i)
{
label pointI = meshPoints[i];
Map<label>::const_iterator iter = mpm.find(pointI);
if (iter != mpm.end())
{
cppFld[iter()] = pointValues[i];
}
}
globalMeshData::syncData
(
cppFld,
gd.globalPointSlaves(),
gd.globalPointTransformedSlaves(),
gd.globalPointSlavesMap(),
gd.globalTransforms(),
cop,
true //position?
);
forAll(meshPoints, i)
{
label pointI = meshPoints[i];
Map<label>::const_iterator iter = mpm.find(pointI);
if (iter != mpm.end())
{
pointValues[i] = cppFld[iter()];
}
}
}
template <class T, class CombineOp>
void Foam::syncTools::syncEdgeList void Foam::syncTools::syncEdgeList
( (
const polyMesh& mesh, const polyMesh& mesh,
UList<T>& edgeValues, UList<T>& edgeValues,
const CombineOp& cop, const CombineOp& cop,
const T& nullValue, const T& nullValue
const TransformOp& top
) )
{ {
if (edgeValues.size() != mesh.nEdges()) if (edgeValues.size() != mesh.nEdges())
@ -1006,168 +1154,78 @@ void Foam::syncTools::syncEdgeList
FatalErrorIn FatalErrorIn
( (
"syncTools<class T, class CombineOp>::syncEdgeList" "syncTools<class T, class CombineOp>::syncEdgeList"
"(const polyMesh&, UList<T>&, const CombineOp&, const T&" "(const polyMesh&, UList<T>&, const CombineOp&, const T&)"
", const bool)"
) << "Number of values " << edgeValues.size() ) << "Number of values " << edgeValues.size()
<< " is not equal to the number of edges in the mesh " << " is not equal to the number of edges in the mesh "
<< mesh.nEdges() << abort(FatalError); << mesh.nEdges() << abort(FatalError);
} }
const polyBoundaryMesh& patches = mesh.boundaryMesh(); const globalMeshData& gd = mesh.globalData();
const labelList& meshEdges = gd.coupledPatchMeshEdges();
const globalIndexAndTransform& git = gd.globalTransforms();
const mapDistribute& edgeMap = gd.globalEdgeSlavesMap();
if (!hasCouples(patches)) List<T> cppFld(UIndirectList<T>(edgeValues, meshEdges));
globalMeshData::syncData
(
cppFld,
gd.globalEdgeSlaves(),
gd.globalEdgeTransformedSlaves(),
edgeMap,
git,
cop,
false //position?
);
// Extract back onto mesh
forAll(meshEdges, i)
{ {
return; edgeValues[meshEdges[i]] = cppFld[i];
}
}
template <class CombineOp>
void Foam::syncTools::syncEdgePositions
(
const polyMesh& mesh,
UList<point>& edgeValues,
const CombineOp& cop,
const point& nullValue
)
{
if (edgeValues.size() != mesh.nEdges())
{
FatalErrorIn
(
"syncTools<class CombineOp>::syncEdgePositions"
"(const polyMesh&, UList<point>&, const CombineOp&, const point&)"
) << "Number of values " << edgeValues.size()
<< " is not equal to the number of edges in the mesh "
<< mesh.nEdges() << abort(FatalError);
} }
if (Pstream::parRun()) const globalMeshData& gd = mesh.globalData();
const labelList& meshEdges = gd.coupledPatchMeshEdges();
List<point> cppFld(UIndirectList<point>(edgeValues, meshEdges));
globalMeshData::syncData
(
cppFld,
gd.globalEdgeSlaves(),
gd.globalEdgeTransformedSlaves(),
gd.globalEdgeSlavesMap(),
gd.globalTransforms(),
cop,
true //position?
);
// Extract back onto mesh
forAll(meshEdges, i)
{ {
PstreamBuffers pBufs(Pstream::nonBlocking); edgeValues[meshEdges[i]] = cppFld[i];
// Send
forAll(patches, patchI)
{
if
(
isA<processorPolyPatch>(patches[patchI])
&& patches[patchI].nEdges() > 0
)
{
const processorPolyPatch& procPatch =
refCast<const processorPolyPatch>(patches[patchI]);
const labelList& meshEdges = procPatch.meshEdges();
const labelList& neighbEdges = procPatch.neighbEdges();
// Get region per patch edge in neighbouring edge numbers.
Field<T> patchInfo(procPatch.nEdges(), nullValue);
forAll(neighbEdges, edgeI)
{
label nbrEdgeI = neighbEdges[edgeI];
patchInfo[nbrEdgeI] = edgeValues[meshEdges[edgeI]];
}
UOPstream toNbr(procPatch.neighbProcNo(), pBufs);
toNbr << patchInfo;
}
}
pBufs.finishedSends();
// Receive and combine.
forAll(patches, patchI)
{
if
(
isA<processorPolyPatch>(patches[patchI])
&& patches[patchI].nEdges() > 0
)
{
const processorPolyPatch& procPatch =
refCast<const processorPolyPatch>(patches[patchI]);
const labelList& meshEdges = procPatch.meshEdges();
// Receive from neighbour. Is per patch edge the region of the
// neighbouring patch edge.
Field<T> nbrPatchInfo(procPatch.nEdges());
{
UIPstream fromNeighb(procPatch.neighbProcNo(), pBufs);
fromNeighb >> nbrPatchInfo;
}
// Transform to this side
top(procPatch, nbrPatchInfo);
forAll(meshEdges, edgeI)
{
label meshEdgeI = meshEdges[edgeI];
cop(edgeValues[meshEdgeI], nbrPatchInfo[edgeI]);
}
}
}
}
// Do the cyclics.
forAll(patches, patchI)
{
if (isA<cyclicPolyPatch>(patches[patchI]))
{
const cyclicPolyPatch& cycPatch =
refCast<const cyclicPolyPatch>(patches[patchI]);
if (cycPatch.owner())
{
// Owner does all.
const edgeList& coupledEdges = cycPatch.coupledEdges();
const labelList& meshEdges = cycPatch.meshEdges();
const cyclicPolyPatch& nbrPatch = cycPatch.neighbPatch();
const labelList& nbrMeshEdges = nbrPatch.meshEdges();
Field<T> half0Values(coupledEdges.size());
Field<T> half1Values(coupledEdges.size());
forAll(coupledEdges, i)
{
const edge& e = coupledEdges[i];
half0Values[i] = edgeValues[meshEdges[e[0]]];
half1Values[i] = edgeValues[nbrMeshEdges[e[1]]];
}
//SubField<T> slice0(half0Values, half0Values.size());
//SubField<T> slice1(half1Values, half1Values.size());
//top(cycPatch, reinterpret_cast<Field<T>&>(slice1));
//top(nbrPatch, reinterpret_cast<Field<T>&>(slice0));
top(cycPatch, half1Values);
top(nbrPatch, half0Values);
forAll(coupledEdges, i)
{
const edge& e = coupledEdges[i];
cop(edgeValues[meshEdges[e[0]]], half1Values[i]);
cop(edgeValues[nbrMeshEdges[e[1]]], half0Values[i]);
}
}
}
}
//- Note: hasTransformation is only used for warning messages so
// reduction not strictly nessecary.
//reduce(hasTransformation, orOp<bool>());
// Do the multiple shared edges
const globalMeshData& pd = mesh.globalData();
if (pd.nGlobalEdges() > 0)
{
// Values on shared edges.
Field<T> sharedPts(pd.nGlobalEdges(), nullValue);
forAll(pd.sharedEdgeLabels(), i)
{
label meshEdgeI = pd.sharedEdgeLabels()[i];
// Fill my entries in the shared edges
sharedPts[pd.sharedEdgeAddr()[i]] = edgeValues[meshEdgeI];
}
// Combine on master.
Pstream::listCombineGather(sharedPts, cop);
Pstream::listCombineScatter(sharedPts);
// Now we will all have the same information. Merge it back with
// my local information.
forAll(pd.sharedEdgeLabels(), i)
{
label meshEdgeI = pd.sharedEdgeLabels()[i];
edgeValues[meshEdgeI] = sharedPts[pd.sharedEdgeAddr()[i]];
}
} }
} }
@ -1197,12 +1255,6 @@ void Foam::syncTools::syncBoundaryFaceList
const polyBoundaryMesh& patches = mesh.boundaryMesh(); const polyBoundaryMesh& patches = mesh.boundaryMesh();
if (!hasCouples(patches))
{
return;
}
if (Pstream::parRun()) if (Pstream::parRun())
{ {
PstreamBuffers pBufs(Pstream::nonBlocking); PstreamBuffers pBufs(Pstream::nonBlocking);
@ -1223,13 +1275,7 @@ void Foam::syncTools::syncBoundaryFaceList
label patchStart = procPatch.start()-mesh.nInternalFaces(); label patchStart = procPatch.start()-mesh.nInternalFaces();
UOPstream toNbr(procPatch.neighbProcNo(), pBufs); UOPstream toNbr(procPatch.neighbProcNo(), pBufs);
toNbr << toNbr << SubField<T>(faceValues, procPatch.size(), patchStart);
SubField<T>
(
faceValues,
procPatch.size(),
patchStart
);
} }
} }
@ -1331,11 +1377,6 @@ void Foam::syncTools::syncFaceList
const polyBoundaryMesh& patches = mesh.boundaryMesh(); const polyBoundaryMesh& patches = mesh.boundaryMesh();
if (!hasCouples(patches))
{
return;
}
if (Pstream::parRun()) if (Pstream::parRun())
{ {
PstreamBuffers pBufs(Pstream::nonBlocking); PstreamBuffers pBufs(Pstream::nonBlocking);
@ -1466,11 +1507,6 @@ void Foam::syncTools::syncPointList
const polyBoundaryMesh& patches = mesh.boundaryMesh(); const polyBoundaryMesh& patches = mesh.boundaryMesh();
if (!hasCouples(patches))
{
return;
}
if (Pstream::parRun()) if (Pstream::parRun())
{ {
PstreamBuffers pBufs(Pstream::nonBlocking); PstreamBuffers pBufs(Pstream::nonBlocking);
@ -1630,11 +1666,6 @@ void Foam::syncTools::syncEdgeList
const polyBoundaryMesh& patches = mesh.boundaryMesh(); const polyBoundaryMesh& patches = mesh.boundaryMesh();
if (!hasCouples(patches))
{
return;
}
if (Pstream::parRun()) if (Pstream::parRun())
{ {
PstreamBuffers pBufs(Pstream::nonBlocking); PstreamBuffers pBufs(Pstream::nonBlocking);

11
src/OpenFOAM/primitives/Pair/labelPair.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -27,19 +27,26 @@ Typedef
Description Description
Label pair Label pair
Typedef
Foam::labelPairList
Description
List of labelPairs
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
#ifndef labelPair_H #ifndef labelPair_H
#define labelPair_H #define labelPair_H
#include "label.H"
#include "Pair.H" #include "Pair.H"
#include "List.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam namespace Foam
{ {
typedef Pair<label> labelPair; typedef Pair<label> labelPair;
typedef List<labelPair> labelPairList;
} }
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

21
src/lagrangian/basic/InteractionLists/globalIndexAndTransform/globalIndexAndTransform.C → src/OpenFOAM/primitives/globalIndexAndTransform/globalIndexAndTransform.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -288,6 +288,19 @@ void Foam::globalIndexAndTransform::determineTransforms()
} }
Pstream::scatter(transforms_); Pstream::scatter(transforms_);
if (transforms_.size() > 3)
{
WarningIn
(
"void globalIndexAndTransform::determineTransforms()"
) << "More than three independent basic "
<< "transforms detected:" << nl
<< transforms_ << nl
<< "This is not a space filling tiling and will probably"
<< " give problems for e.g. lagrangian tracking or interpolation"
<< endl;
}
} }
@ -324,6 +337,11 @@ void Foam::globalIndexAndTransform::determineTransformPermutations()
transformPermutations_[tPI] = transform; transformPermutations_[tPI] = transform;
} }
// Encode index for 0 sign
labelList permutationIndices(nIndependentTransforms(), 0);
nullTransformIndex_ = encodeTransformIndex(permutationIndices);
} }
@ -463,6 +481,7 @@ Foam::globalIndexAndTransform::globalIndexAndTransform
determinePatchTransformSign(); determinePatchTransformSign();
} }
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::globalIndexAndTransform::~globalIndexAndTransform() Foam::globalIndexAndTransform::~globalIndexAndTransform()

55
src/lagrangian/basic/InteractionLists/globalIndexAndTransform/globalIndexAndTransform.H → src/OpenFOAM/primitives/globalIndexAndTransform/globalIndexAndTransform.H
View File

@ -42,11 +42,9 @@ SourceFiles
#ifndef globalIndexAndTransform_H #ifndef globalIndexAndTransform_H
#define globalIndexAndTransform_H #define globalIndexAndTransform_H
#include "Pstream.H"
#include "List.H"
#include "labelPair.H" #include "labelPair.H"
#include "vectorTensorTransform.H" #include "vectorTensorTransform.H"
#include "polyMesh.H" #include "HashSet.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -82,6 +80,9 @@ class globalIndexAndTransform
// transform. // transform.
List<vectorTensorTransform> transformPermutations_; List<vectorTensorTransform> transformPermutations_;
//- Index of identity transform.
label nullTransformIndex_;
//- Mapping from patch index to which transform it matches (or //- Mapping from patch index to which transform it matches (or
// -1 for none) (.first()) and what sign to use for it, // -1 for none) (.first()) and what sign to use for it,
// i.e. +/- 1 (.second()). // i.e. +/- 1 (.second()).
@ -93,6 +94,7 @@ class globalIndexAndTransform
//- Number of spaces to reserve for transform encoding //- Number of spaces to reserve for transform encoding
static const label base_; static const label base_;
// Private Member Functions // Private Member Functions
//- Determine all of the independent basic transforms of the //- Determine all of the independent basic transforms of the
@ -118,6 +120,12 @@ class globalIndexAndTransform
bool checkBothSigns bool checkBothSigns
) const; ) const;
//- Decode transform index. Hardcoded to 3 independent transforms max.
inline static FixedList<label, 3> decodeTransformIndex
(
const label transformIndex
);
//- Disallow default bitwise copy construct //- Disallow default bitwise copy construct
globalIndexAndTransform(const globalIndexAndTransform&); globalIndexAndTransform(const globalIndexAndTransform&);
@ -147,15 +155,39 @@ public:
const List<label>& permutationIndices const List<label>& permutationIndices
) const; ) const;
//- Add patch transformation to transformIndex. Return new
// transformIndex. (by default the patch is the sending, not the
// receiving, patch)
inline label addToTransformIndex
(
const label transformIndex,
const label patchI,
const bool isSendingSide = true
) const;
//- Combine two transformIndices
static inline label mergeTransformIndex
(
const label transformIndex0,
const label transformIndex1
);
//- Combine two transformIndices
static inline label minimumTransformIndex
(
const label transformIndex0,
const label transformIndex1
);
//- Encode index and bare index as components on own processor //- Encode index and bare index as components on own processor
inline labelPair encode inline static labelPair encode
( (
const label index, const label index,
const label transformIndex const label transformIndex
); );
//- Encode index and bare index as components on given processor //- Encode index and bare index as components on given processor
inline labelPair encode inline static labelPair encode
( (
const label procI, const label procI,
const label index, const label index,
@ -163,13 +195,16 @@ public:
); );
//- Index carried by the object //- Index carried by the object
inline label index(const labelPair& globalIAndTransform); inline static label index(const labelPair& globalIAndTransform);
//- Which processor does this come from? //- Which processor does this come from?
inline label processor(const labelPair& globalIAndTransform); inline static label processor(const labelPair& globalIAndTransform);
//- Transform carried by the object //- Transform carried by the object
inline label transformIndex(const labelPair& globalIAndTransform); inline static label transformIndex
(
const labelPair& globalIAndTransform
);
// Access // Access
@ -183,6 +218,10 @@ public:
inline const List<vectorTensorTransform>& inline const List<vectorTensorTransform>&
transformPermutations() const; transformPermutations() const;
//- Return the transformIndex (index in transformPermutations)
// of the identity transform
inline label nullTransformIndex() const;
//- Return access to the per-patch transform-sign pairs //- Return access to the per-patch transform-sign pairs
inline const List<Pair<label> >& patchTransformSign() const; inline const List<Pair<label> >& patchTransformSign() const;

222
src/lagrangian/basic/InteractionLists/globalIndexAndTransform/globalIndexAndTransformI.H → src/OpenFOAM/primitives/globalIndexAndTransform/globalIndexAndTransformI.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -23,8 +23,9 @@ License
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * // #include "polyMesh.H"
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::label Foam::globalIndexAndTransform::encodeTransformIndex Foam::label Foam::globalIndexAndTransform::encodeTransformIndex
( (
@ -74,6 +75,210 @@ Foam::label Foam::globalIndexAndTransform::encodeTransformIndex
} }
Foam::FixedList<Foam::label, 3>
Foam::globalIndexAndTransform::decodeTransformIndex
(
const label transformIndex
)
{
FixedList<label, 3> permutation;
label t = transformIndex;
permutation[0] = (t%3)-1;
t /= 3;
permutation[1] = (t%3)-1;
t /= 3;
permutation[2] = (t%3)-1;
# ifdef FULLDEBUG
t /= 3;
if (t != 0)
{
FatalErrorIn
(
"globalIndexAndTransform::decodeTransformIndex(const label)"
) << "transformIndex : " << transformIndex
<< " has more than 3 fields."
<< abort(FatalError);
}
# endif
return permutation;
}
Foam::label Foam::globalIndexAndTransform::addToTransformIndex
(
const label transformIndex,
const label patchI,
const bool isSendingSide
) const
{
const Pair<label>& transSign = patchTransformSign_[patchI];
label matchTransI = transSign.first();
// Hardcoded for max 3 transforms only!
if (matchTransI > -1 && matchTransI < 3)
{
FixedList<label, 3> permutation = decodeTransformIndex(transformIndex);
// Add patch transform
// ~~~~~~~~~~~~~~~~~~~
label sign = transSign.second();
if (!isSendingSide)
{
sign = -sign;
}
// If this transform been found already by a patch?
if (permutation[matchTransI] != 0)
{
if (sign == 0)
{
// sent from patch without a transformation. Do nothing.
FatalErrorIn("globalIndexAndTransform::addToTransformIndex(..)")
<< "patch:" << mesh_.boundaryMesh()[patchI].name()
<< " transform:" << matchTransI << " sign:" << sign
<< " current transforms:" << permutation
<< exit(FatalError);
}
else if (sign == permutation[matchTransI])
{
FatalErrorIn
(
"Foam::label "
"Foam::globalIndexAndTransform::addToTransformIndex\n"
"(\n"
"const label,\n"
"const label,\n"
"const bool\n"
") const\n"
) << "More than one patch accessing the same transform "
<< "but not of the same sign." << endl
<< "patch:" << mesh_.boundaryMesh()[patchI].name()
<< " transform:" << matchTransI << " sign:" << sign
<< " current transforms:" << permutation
<< exit(FatalError);
}
else
{
permutation[matchTransI] = 0;
}
}
else
{
permutation[matchTransI] = sign;
}
// Re-encode permutation
// ~~~~~~~~~~~~~~~~~~~~~
return
(permutation[2]+1)*9
+ (permutation[1]+1)*3
+ (permutation[0]+1);
}
else
{
return transformIndex;
}
}
Foam::label Foam::globalIndexAndTransform::mergeTransformIndex
(
const label transformIndex0,
const label transformIndex1
)
{
FixedList<label, 3> permutation0 = decodeTransformIndex(transformIndex0);
FixedList<label, 3> permutation1 = decodeTransformIndex(transformIndex1);
forAll(permutation0, i)
{
if (permutation0[i] == 0)
{
// Take over whatever sign 1 has
permutation0[i] = permutation1[i];
}
else if (permutation1[i] != 0 && permutation0[i] != permutation1[i])
{
FatalErrorIn
(
"Foam::label "
"Foam::globalIndexAndTransform::addToTransformIndex\n"
"(\n"
"const label,\n"
"const label\n"
") const\n"
) << "More than one patch accessing the same transform "
<< "but not of the same sign." << endl
<< "Trying to combine two transforms " << transformIndex0
<< " with signs " << permutation0
<< " and " << transformIndex1
<< " with signs " << permutation1
<< exit(FatalError);
}
}
return
(permutation0[2]+1)*9
+ (permutation0[1]+1)*3
+ (permutation0[0]+1);
}
Foam::label Foam::globalIndexAndTransform::minimumTransformIndex
(
const label transformIndex0,
const label transformIndex1
)
{
FixedList<label, 3> permutation0 = decodeTransformIndex(transformIndex0);
FixedList<label, 3> permutation1 = decodeTransformIndex(transformIndex1);
forAll(permutation0, i)
{
if (permutation0[i] == 0)
{
// 0 wins.
}
else if (permutation1[i] == 0)
{
// 0 wins.
permutation0[i] = permutation1[i];
}
else if (permutation0[i] != permutation1[i])
{
FatalErrorIn
(
"Foam::label "
"Foam::globalIndexAndTransform::minimumTransformIndex\n"
"(\n"
"const label,\n"
"const label\n"
") const\n"
) << "More than one patch accessing the same transform "
<< "but not of the same sign." << endl
<< "Trying to combine two transforms " << transformIndex0
<< " with signs " << permutation0
<< " and " << transformIndex1
<< " with signs " << permutation1
<< exit(FatalError);
}
}
return
(permutation0[2]+1)*9
+ (permutation0[1]+1)*3
+ (permutation0[0]+1);
}
Foam::labelPair Foam::globalIndexAndTransform::encode Foam::labelPair Foam::globalIndexAndTransform::encode
( (
const label index, const label index,
@ -133,7 +338,7 @@ Foam::labelPair Foam::globalIndexAndTransform::encode
} }
Foam::label Foam::globalIndexAndTransform::index Foam::label Foam::globalIndexAndTransform::index
( (
const labelPair& globalIAndTransform const labelPair& globalIAndTransform
) )
@ -180,6 +385,12 @@ Foam::globalIndexAndTransform::transformPermutations() const
} }
Foam::label Foam::globalIndexAndTransform::nullTransformIndex() const
{
return nullTransformIndex_;
}
const Foam::List<Foam::Pair<Foam::label> >& const Foam::List<Foam::Pair<Foam::label> >&
Foam::globalIndexAndTransform::patchTransformSign() const Foam::globalIndexAndTransform::patchTransformSign() const
{ {
@ -399,7 +610,10 @@ Foam::pointField Foam::globalIndexAndTransform::transformPatches
forAll(transIs, tII) forAll(transIs, tII)
{ {
transPts[tII] = transformPermutations_[transIs[tII]].transform(pt); transPts[tII] = transformPermutations_[transIs[tII]].transformPosition
(
pt
);
} }
return transPts; return transPts;

30
src/lagrangian/basic/InteractionLists/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransform.C → src/OpenFOAM/primitives/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransform.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -56,7 +56,7 @@ Foam::vectorTensorTransform::vectorTensorTransform(Istream& is)
} }
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::word Foam::name(const vectorTensorTransform& s) Foam::word Foam::name(const vectorTensorTransform& s)
{ {
@ -68,6 +68,32 @@ Foam::word Foam::name(const vectorTensorTransform& s)
} }
template<>
Foam::tmp<Foam::Field<bool> > Foam::vectorTensorTransform::transform
(
const Field<bool>& fld
) const
{
return fld;
}
template<>
Foam::tmp<Foam::Field<Foam::label> > Foam::vectorTensorTransform::transform
(
const Field<label>& fld
) const
{
return fld;
}
template<>
Foam::tmp<Foam::Field<Foam::scalar> > Foam::vectorTensorTransform::transform
(
const Field<scalar>& fld
) const
{
return fld;
}
// * * * * * * * * * * * * * * * IOstream Operators * * * * * * * * * * * * // // * * * * * * * * * * * * * * * IOstream Operators * * * * * * * * * * * * //
Foam::Istream& Foam::operator>>(Istream& is, vectorTensorTransform& tr) Foam::Istream& Foam::operator>>(Istream& is, vectorTensorTransform& tr)

33
src/lagrangian/basic/InteractionLists/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransform.H → src/OpenFOAM/primitives/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransform.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -31,13 +31,13 @@ Description
SourceFiles SourceFiles
vectorTensorTransformI.H vectorTensorTransformI.H
vectorTensorTransform.C vectorTensorTransform.C
vectorTensorTransformTemplates.C
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
#ifndef vectorTensorTransform_H #ifndef vectorTensorTransform_H
#define vectorTensorTransform_H #define vectorTensorTransform_H
#include "vector.H"
#include "tensor.H" #include "tensor.H"
#include "word.H" #include "word.H"
#include "contiguous.H" #include "contiguous.H"
@ -132,17 +132,21 @@ public:
// Transform // Transform
//- Transform the given vector //- Transform the given position
inline vector transform(const vector& v) const; inline vector transformPosition(const vector& v) const;
//- Transform the given pointField //- Transform the given pointField
inline pointField transform(const pointField& pts) const; inline pointField transformPosition(const pointField& pts) const;
//- Inverse transform the given vector //- Inverse transform the given position
inline vector invTransform(const vector& v) const; inline vector invTransformPosition(const vector& v) const;
//- Inverse transform the given pointField //- Inverse transform the given pointField
inline pointField invTransform(const pointField& pts) const; inline pointField invTransformPosition(const pointField& pts) const;
//- Transform the given field
template<class Type>
tmp<Field<Type> > transform(const Field<Type>&) const;
// Member operators // Member operators
@ -180,6 +184,15 @@ word name(const vectorTensorTransform&);
template<> template<>
inline bool contiguous<vectorTensorTransform>() {return true;} inline bool contiguous<vectorTensorTransform>() {return true;}
//- Template specialisations
template<>
tmp<Field<bool> > vectorTensorTransform::transform(const Field<bool>&) const;
template<>
tmp<Field<label> > vectorTensorTransform::transform(const Field<label>&) const;
template<>
tmp<Field<scalar> > vectorTensorTransform::transform(const Field<scalar>&)
const;
// * * * * * * * * * * * * * * * Global Operators * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * Global Operators * * * * * * * * * * * * * //
@ -234,6 +247,10 @@ inline vectorTensorTransform operator&
#include "vectorTensorTransformI.H" #include "vectorTensorTransformI.H"
#ifdef NoRepository
# include "vectorTensorTransformTemplates.C"
#endif
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif #endif

10
src/lagrangian/basic/InteractionLists/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransformI.H → src/OpenFOAM/primitives/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransformI.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -99,7 +99,7 @@ inline Foam::tensor& Foam::vectorTensorTransform::R()
} }
inline Foam::vector Foam::vectorTensorTransform::transform inline Foam::vector Foam::vectorTensorTransform::transformPosition
( (
const vector& v const vector& v
) const ) const
@ -115,7 +115,7 @@ inline Foam::vector Foam::vectorTensorTransform::transform
} }
inline Foam::pointField Foam::vectorTensorTransform::transform inline Foam::pointField Foam::vectorTensorTransform::transformPosition
( (
const pointField& pts const pointField& pts
) const ) const
@ -134,7 +134,7 @@ inline Foam::pointField Foam::vectorTensorTransform::transform
} }
inline Foam::vector Foam::vectorTensorTransform::invTransform inline Foam::vector Foam::vectorTensorTransform::invTransformPosition
( (
const vector& v const vector& v
) const ) const
@ -150,7 +150,7 @@ inline Foam::vector Foam::vectorTensorTransform::invTransform
} }
inline Foam::pointField Foam::vectorTensorTransform::invTransform inline Foam::pointField Foam::vectorTensorTransform::invTransformPosition
( (
const pointField& pts const pointField& pts
) const ) const

45
src/OpenFOAM/primitives/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransformTemplates.C Normal file
View File

@ -0,0 +1,45 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2011 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
template<class Type>
Foam::tmp<Foam::Field<Type> > Foam::vectorTensorTransform::transform
(
const Field<Type>& fld
) const
{
if (hasR_)
{
return R() & fld;
}
else
{
return fld;
}
}
// ************************************************************************* //

8
src/dummyThirdParty/metisDecomp/dummyMetisDecomp.C vendored
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -33,8 +33,10 @@ static const char* notImplementedMessage =
"\n" "\n"
"Please install metis and make sure that libmetis.so is in your " "Please install metis and make sure that libmetis.so is in your "
"LD_LIBRARY_PATH.\n" "LD_LIBRARY_PATH.\n"
"The metisDecomp library can then be built in " "The metisDecomp library can then be built from "
"$FOAM_SRC/parallel/decompose/decompositionMethods/metisDecomp\n"; "$FOAM_SRC/parallel/decompose/metisDecomp and dynamically loading or linking"
" this library will add metis as a decomposition method.\n"
"Please be aware that there are license restrictions on using Metis.";
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

4
src/dummyThirdParty/ptscotchDecomp/dummyPtscotchDecomp.C vendored
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -60,6 +60,7 @@ void Foam::ptscotchDecomp::check(const int retVal, const char* str)
Foam::label Foam::ptscotchDecomp::decomposeZeroDomains Foam::label Foam::ptscotchDecomp::decomposeZeroDomains
( (
const fileName& meshPath,
const List<int>& initxadj, const List<int>& initxadj,
const List<int>& initadjncy, const List<int>& initadjncy,
const scalarField& initcWeights, const scalarField& initcWeights,
@ -82,6 +83,7 @@ Foam::label Foam::ptscotchDecomp::decomposeZeroDomains
} }
Foam::label Foam::ptscotchDecomp::decompose Foam::label Foam::ptscotchDecomp::decompose
( (
const fileName& meshPath,
const List<int>& adjncy, const List<int>& adjncy,
const List<int>& xadj, const List<int>& xadj,
const scalarField& cWeights, const scalarField& cWeights,

5
src/dynamicMesh/polyTopoChange/polyTopoChange/addPatchCellLayer.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -104,8 +104,7 @@ Foam::labelListList Foam::addPatchCellLayer::calcGlobalEdgeFaces
mesh, mesh,
globalEdgeFaces, globalEdgeFaces,
uniqueEqOp(), uniqueEqOp(),
labelList(), // null value labelList() // null value
Foam::dummyTransform() // dummy transform
); );
// Extract pp part // Extract pp part

4
src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -4394,7 +4394,7 @@ void Foam::hexRef8::distribute(const mapDistributePolyMesh& map)
void Foam::hexRef8::checkMesh() const void Foam::hexRef8::checkMesh() const
{ {
const scalar smallDim = 1E-6 * mesh_.globalData().bb().mag(); const scalar smallDim = 1E-6 * mesh_.bounds().mag();
if (debug) if (debug)
{ {

24
src/finiteVolume/fields/fvPatchFields/derived/timeVaryingMappedFixedValue/timeVaryingMappedFixedValueFvPatchField.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -342,8 +342,6 @@ void timeVaryingMappedFixedValueFvPatchField<Type>::readSamplePoints()
localVertices2D[i][1] = localVertices[i][1]; localVertices2D[i][1] = localVertices[i][1];
} }
triSurface s(triSurfaceTools::delaunay2D(localVertices2D));
tmp<pointField> localFaceCentres tmp<pointField> localFaceCentres
( (
referenceCS().localPosition referenceCS().localPosition
@ -352,6 +350,26 @@ void timeVaryingMappedFixedValueFvPatchField<Type>::readSamplePoints()
) )
); );
if (debug)
{
OFstream str
(
this->db().time().path()/this->patch().name()
+ "_localFaceCentres.obj"
);
Pout<< "readSamplePoints :"
<< " Dumping face centres to " << str.name() << endl;
forAll(localFaceCentres(), i)
{
const point& p = localFaceCentres()[i];
str<< "v " << p.x() << ' ' << p.y() << ' ' << p.z() << nl;
}
}
triSurface s(triSurfaceTools::delaunay2D(localVertices2D));
if (debug) if (debug)
{ {
Pout<< "readSamplePoints :" Pout<< "readSamplePoints :"

6
src/finiteVolume/interpolation/interpolation/interpolationCellPoint/cellPointWeight/cellPointWeight.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -155,8 +155,8 @@ void Foam::cellPointWeight::findTriangle
List<tetIndices> faceTets = polyMeshTetDecomposition::faceTetIndices List<tetIndices> faceTets = polyMeshTetDecomposition::faceTetIndices
( (
mesh, mesh,
mesh.faceOwner()[faceI], faceI,
faceI mesh.faceOwner()[faceI]
); );
const scalar faceAreaSqr = magSqr(mesh.faceAreas()[faceI]); const scalar faceAreaSqr = magSqr(mesh.faceAreas()[faceI]);

109
src/finiteVolume/interpolation/volPointInterpolation/volPointInterpolate.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -39,6 +39,104 @@ namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
template<class Type, class CombineOp>
void volPointInterpolation::syncUntransformedData
(
List<Type>& pointData,
const CombineOp& cop
) const
{
// Transfer onto coupled patch
const globalMeshData& gmd = mesh().globalData();
const indirectPrimitivePatch& cpp = gmd.coupledPatch();
const labelList& meshPoints = cpp.meshPoints();
const mapDistribute& slavesMap = gmd.globalPointSlavesMap();
const labelListList& slaves = gmd.globalPointSlaves();
List<Type> elems(slavesMap.constructSize());
forAll(meshPoints, i)
{
elems[i] = pointData[meshPoints[i]];
}
// Pull slave data onto master. No need to update transformed slots.
slavesMap.distribute(elems, false);
// Combine master data with slave data
forAll(slaves, i)
{
Type& elem = elems[i];
const labelList& slavePoints = slaves[i];
// Combine master with untransformed slave data
forAll(slavePoints, j)
{
cop(elem, elems[slavePoints[j]]);
}
// Copy result back to slave slots
forAll(slavePoints, j)
{
elems[slavePoints[j]] = elem;
}
}
// Push slave-slot data back to slaves
slavesMap.reverseDistribute(elems.size(), elems, false);
// Extract back onto mesh
forAll(meshPoints, i)
{
pointData[meshPoints[i]] = elems[i];
}
}
template<class Type>
void volPointInterpolation::pushUntransformedData
(
List<Type>& pointData
) const
{
// Transfer onto coupled patch
const globalMeshData& gmd = mesh().globalData();
const indirectPrimitivePatch& cpp = gmd.coupledPatch();
const labelList& meshPoints = cpp.meshPoints();
const mapDistribute& slavesMap = gmd.globalPointSlavesMap();
const labelListList& slaves = gmd.globalPointSlaves();
List<Type> elems(slavesMap.constructSize());
forAll(meshPoints, i)
{
elems[i] = pointData[meshPoints[i]];
}
// Combine master data with slave data
forAll(slaves, i)
{
const labelList& slavePoints = slaves[i];
// Copy master data to slave slots
forAll(slaves, j)
{
elems[slavePoints[j]] = elems[i];
}
}
// Push slave-slot data back to slaves
slavesMap.reverseDistribute(elems.size(), elems, false);
// Extract back onto mesh
forAll(meshPoints, i)
{
pointData[meshPoints[i]] = elems[i];
}
}
template<class Type> template<class Type>
void volPointInterpolation::addSeparated void volPointInterpolation::addSeparated
( (
@ -204,7 +302,8 @@ void volPointInterpolation::interpolateBoundaryField
} }
// Sum collocated contributions // Sum collocated contributions
mesh().globalData().syncPointData(pfi, plusEqOp<Type>()); //mesh().globalData().syncPointData(pfi, plusEqOp<Type>());
syncUntransformedData(pfi, plusEqOp<Type>());
// And add separated contributions // And add separated contributions
addSeparated(pf); addSeparated(pf);
@ -213,7 +312,8 @@ void volPointInterpolation::interpolateBoundaryField
// a coupled point to have its master on a different patch so // a coupled point to have its master on a different patch so
// to make sure just push master data to slaves. Reuse the syncPointData // to make sure just push master data to slaves. Reuse the syncPointData
// structure. // structure.
mesh().globalData().syncPointData(pfi, nopEqOp<Type>()); //mesh().globalData().syncPointData(pfi, nopEqOp<Type>());
pushUntransformedData(pfi);
@ -238,7 +338,8 @@ void volPointInterpolation::interpolateBoundaryField
pf.correctBoundaryConditions(); pf.correctBoundaryConditions();
// Sync any dangling points // Sync any dangling points
mesh().globalData().syncPointData(pfi, nopEqOp<Type>()); //mesh().globalData().syncPointData(pfi, nopEqOp<Type>());
pushUntransformedData(pfi);
// Apply multiple constraints on edge/corner points // Apply multiple constraints on edge/corner points
applyCornerConstraints(pf); applyCornerConstraints(pf);

13
src/finiteVolume/interpolation/volPointInterpolation/volPointInterpolation.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -101,10 +101,11 @@ void volPointInterpolation::calcBoundaryAddressing()
// no face of a certain patch still can have boundary points marked. // no face of a certain patch still can have boundary points marked.
if (debug) if (debug)
{ {
boolList oldData(isPatchPoint_); boolList oldData(isPatchPoint_);
mesh().globalData().syncPointData(isPatchPoint_, orEqOp<bool>()); //mesh().globalData().syncPointData(isPatchPoint_, orEqOp<bool>());
syncUntransformedData(isPatchPoint_, orEqOp<bool>());
forAll(isPatchPoint_, pointI) forAll(isPatchPoint_, pointI)
{ {
@ -281,7 +282,8 @@ void volPointInterpolation::makeWeights()
// Sum collocated contributions // Sum collocated contributions
mesh().globalData().syncPointData(sumWeights, plusEqOp<scalar>()); //mesh().globalData().syncPointData(sumWeights, plusEqOp<scalar>());
syncUntransformedData(sumWeights, plusEqOp<scalar>());
// And add separated contributions // And add separated contributions
addSeparated(sumWeights); addSeparated(sumWeights);
@ -290,7 +292,8 @@ void volPointInterpolation::makeWeights()
// a coupled point to have its master on a different patch so // a coupled point to have its master on a different patch so
// to make sure just push master data to slaves. Reuse the syncPointData // to make sure just push master data to slaves. Reuse the syncPointData
// structure. // structure.
mesh().globalData().syncPointData(sumWeights, nopEqOp<scalar>()); //mesh().globalData().syncPointData(sumWeights, nopEqOp<scalar>());
pushUntransformedData(sumWeights);
// Normalise internal weights // Normalise internal weights

14
src/finiteVolume/interpolation/volPointInterpolation/volPointInterpolation.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -105,6 +105,18 @@ class volPointInterpolation
//- Make patch-patch constraints //- Make patch-patch constraints
void makePatchPatchAddressing(); void makePatchPatchAddressing();
//- Helper: sync data on collocated points only
template<class Type, class CombineOp>
void syncUntransformedData
(
List<Type>& pointData,
const CombineOp& cop
) const;
//- Helper: push master point data to collocated points
template<class Type>
void pushUntransformedData(List<Type>&) const;
//- Get boundary field in same order as boundary faces. Field is //- Get boundary field in same order as boundary faces. Field is
// zero on all coupled and empty patches // zero on all coupled and empty patches
template<class Type> template<class Type>

68
src/lagrangian/basic/InteractionLists/InteractionLists.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2008-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2008-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -24,6 +24,11 @@ License
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
#include "InteractionLists.H" #include "InteractionLists.H"
#include "globalIndexAndTransform.H"
#include "indexedOctree.H"
#include "treeDataFace.H"
#include "treeDataCell.H"
#include "volFields.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * // // * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
@ -61,7 +66,7 @@ void Foam::InteractionLists<ParticleType>::buildInteractionLists()
( (
procBb, procBb,
allExtendedProcBbs, allExtendedProcBbs,
globalTransforms_, mesh_.globalData().globalTransforms(),
extendedProcBbsInRange, extendedProcBbsInRange,
extendedProcBbsTransformIndex, extendedProcBbsTransformIndex,
extendedProcBbsOrigProc extendedProcBbsOrigProc
@ -81,6 +86,9 @@ void Foam::InteractionLists<ParticleType>::buildInteractionLists()
); );
} }
const globalIndexAndTransform& globalTransforms =
mesh_.globalData().globalTransforms();
// Recording which cells are in range of an extended boundBox, as // Recording which cells are in range of an extended boundBox, as
// only these cells will need to be tested to determine which // only these cells will need to be tested to determine which
// referred cells that they interact with. // referred cells that they interact with.
@ -116,7 +124,7 @@ void Foam::InteractionLists<ParticleType>::buildInteractionLists()
cellIAndTToExchange.append cellIAndTToExchange.append
( (
globalTransforms_.encode(cellI, transformIndex) globalTransforms.encode(cellI, transformIndex)
); );
cellBbsToExchange.append(cellBb); cellBbsToExchange.append(cellBb);
@ -173,14 +181,14 @@ void Foam::InteractionLists<ParticleType>::buildInteractionLists()
{ {
const labelPair& ciat = cellIAndTToExchange[bbI]; const labelPair& ciat = cellIAndTToExchange[bbI];
const vectorTensorTransform& transform = globalTransforms_.transform const vectorTensorTransform& transform = globalTransforms.transform
( (
globalTransforms_.transformIndex(ciat) globalTransforms.transformIndex(ciat)
); );
treeBoundBox tempTransformedBb treeBoundBox tempTransformedBb
( (
transform.invTransform(cellBbsToExchange[bbI].points()) transform.invTransformPosition(cellBbsToExchange[bbI].points())
); );
treeBoundBox extendedBb treeBoundBox extendedBb
@ -352,7 +360,7 @@ void Foam::InteractionLists<ParticleType>::buildInteractionLists()
wallFaceIAndTToExchange.append wallFaceIAndTToExchange.append
( (
globalTransforms_.encode(wallFaceI, transformIndex) globalTransforms.encode(wallFaceI, transformIndex)
); );
wallFaceBbsToExchange.append(wallFaceBb); wallFaceBbsToExchange.append(wallFaceBb);
@ -390,14 +398,14 @@ void Foam::InteractionLists<ParticleType>::buildInteractionLists()
{ {
const labelPair& wfiat = wallFaceIAndTToExchange[bbI]; const labelPair& wfiat = wallFaceIAndTToExchange[bbI];
const vectorTensorTransform& transform = globalTransforms_.transform const vectorTensorTransform& transform = globalTransforms.transform
( (
globalTransforms_.transformIndex(wfiat) globalTransforms.transformIndex(wfiat)
); );
treeBoundBox tempTransformedBb treeBoundBox tempTransformedBb
( (
transform.invTransform(wallFaceBbsToExchange[bbI].points()) transform.invTransformPosition(wallFaceBbsToExchange[bbI].points())
); );
treeBoundBox extendedBb treeBoundBox extendedBb
@ -518,11 +526,11 @@ void Foam::InteractionLists<ParticleType>::buildInteractionLists()
{ {
const labelPair& wfiat = wallFaceIndexAndTransformToDistribute_[rWFI]; const labelPair& wfiat = wallFaceIndexAndTransformToDistribute_[rWFI];
label wallFaceIndex = globalTransforms_.index(wfiat); label wallFaceIndex = globalTransforms.index(wfiat);
const vectorTensorTransform& transform = globalTransforms_.transform const vectorTensorTransform& transform = globalTransforms.transform
( (
globalTransforms_.transformIndex(wfiat) globalTransforms.transformIndex(wfiat)
); );
const face& f = mesh_.faces()[wallFaceIndex]; const face& f = mesh_.faces()[wallFaceIndex];
@ -535,7 +543,7 @@ void Foam::InteractionLists<ParticleType>::buildInteractionLists()
referredWallFaces_[rWFI] = referredWallFace referredWallFaces_[rWFI] = referredWallFace
( (
face(identity(f.size())), face(identity(f.size())),
transform.invTransform(f.points(mesh_.points())), transform.invTransformPosition(f.points(mesh_.points())),
patchI patchI
); );
} }
@ -700,7 +708,7 @@ void Foam::InteractionLists<ParticleType>::findExtendedProcBbsInRange
treeBoundBox extendedReferredProcBb treeBoundBox extendedReferredProcBb
( (
transform.transform transform.transformPosition
( (
allExtendedProcBbs[procI].points() allExtendedProcBbs[procI].points()
) )
@ -747,7 +755,7 @@ void Foam::InteractionLists<ParticleType>::findExtendedProcBbsInRange
treeBoundBox extendedReferredProcBb treeBoundBox extendedReferredProcBb
( (
transform.transform transform.transformPosition
( (
allExtendedProcBbs[procI].points() allExtendedProcBbs[procI].points()
) )
@ -790,7 +798,7 @@ void Foam::InteractionLists<ParticleType>::findExtendedProcBbsInRange
treeBoundBox extendedReferredProcBb treeBoundBox extendedReferredProcBb
( (
transform.transform transform.transformPosition
( (
allExtendedProcBbs[procI].points() allExtendedProcBbs[procI].points()
) )
@ -911,6 +919,10 @@ void Foam::InteractionLists<ParticleType>::prepareParticlesToRefer
const List<DynamicList<ParticleType*> >& cellOccupancy const List<DynamicList<ParticleType*> >& cellOccupancy
) )
{ {
const globalIndexAndTransform& globalTransforms =
mesh_.globalData().globalTransforms();
referredParticles_.setSize(cellIndexAndTransformToDistribute_.size()); referredParticles_.setSize(cellIndexAndTransformToDistribute_.size());
// Clear all existing referred particles // Clear all existing referred particles
@ -927,7 +939,7 @@ void Foam::InteractionLists<ParticleType>::prepareParticlesToRefer
{ {
const labelPair ciat = cellIndexAndTransformToDistribute_[i]; const labelPair ciat = cellIndexAndTransformToDistribute_[i];
label cellIndex = globalTransforms_.index(ciat); label cellIndex = globalTransforms.index(ciat);
List<ParticleType*> realParticles = cellOccupancy[cellIndex]; List<ParticleType*> realParticles = cellOccupancy[cellIndex];
@ -952,12 +964,15 @@ void Foam::InteractionLists<ParticleType>::prepareParticleToBeReferred
labelPair ciat labelPair ciat
) )
{ {
const vectorTensorTransform& transform = globalTransforms_.transform const globalIndexAndTransform& globalTransforms =
mesh_.globalData().globalTransforms();
const vectorTensorTransform& transform = globalTransforms.transform
( (
globalTransforms_.transformIndex(ciat) globalTransforms.transformIndex(ciat)
); );
particle->position() = transform.invTransform(particle->position()); particle->position() = transform.invTransformPosition(particle->position());
particle->transformProperties(-transform.t()); particle->transformProperties(-transform.t());
@ -993,6 +1008,9 @@ void Foam::InteractionLists<ParticleType>::fillReferredParticleCloud()
template<class ParticleType> template<class ParticleType>
void Foam::InteractionLists<ParticleType>::prepareWallDataToRefer() void Foam::InteractionLists<ParticleType>::prepareWallDataToRefer()
{ {
const globalIndexAndTransform& globalTransforms =
mesh_.globalData().globalTransforms();
referredWallData_.setSize referredWallData_.setSize
( (
wallFaceIndexAndTransformToDistribute_.size() wallFaceIndexAndTransformToDistribute_.size()
@ -1004,11 +1022,11 @@ void Foam::InteractionLists<ParticleType>::prepareWallDataToRefer()
{ {
const labelPair& wfiat = wallFaceIndexAndTransformToDistribute_[rWVI]; const labelPair& wfiat = wallFaceIndexAndTransformToDistribute_[rWVI];
label wallFaceIndex = globalTransforms_.index(wfiat); label wallFaceIndex = globalTransforms.index(wfiat);
const vectorTensorTransform& transform = globalTransforms_.transform const vectorTensorTransform& transform = globalTransforms.transform
( (
globalTransforms_.transformIndex(wfiat) globalTransforms.transformIndex(wfiat)
); );
label patchI = mesh_.boundaryMesh().patchID() label patchI = mesh_.boundaryMesh().patchID()
@ -1088,7 +1106,6 @@ Foam::InteractionLists<ParticleType>::InteractionLists(const polyMesh& mesh)
writeCloud_(false), writeCloud_(false),
cellMapPtr_(), cellMapPtr_(),
wallFaceMapPtr_(), wallFaceMapPtr_(),
globalTransforms_(mesh_),
maxDistance_(0.0), maxDistance_(0.0),
dil_(), dil_(),
dwfil_(), dwfil_(),
@ -1117,7 +1134,6 @@ Foam::InteractionLists<ParticleType>::InteractionLists
writeCloud_(writeCloud), writeCloud_(writeCloud),
cellMapPtr_(), cellMapPtr_(),
wallFaceMapPtr_(), wallFaceMapPtr_(),
globalTransforms_(mesh_),
maxDistance_(maxDistance), maxDistance_(maxDistance),
dil_(), dil_(),
dwfil_(), dwfil_(),

19
src/lagrangian/basic/InteractionLists/InteractionLists.H
View File

@ -60,21 +60,17 @@ SourceFiles
#define InteractionLists_H #define InteractionLists_H
#include "polyMesh.H" #include "polyMesh.H"
#include "globalIndexAndTransform.H"
#include "referredWallFace.H" #include "referredWallFace.H"
#include "indexedOctree.H" //#include "mapDistribute.H"
#include "Tuple2.H"
#include "treeDataCell.H"
#include "treeDataFace.H"
#include "mapDistribute.H"
#include "volFields.H"
#include "Random.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam namespace Foam
{ {
class globalIndexAndTransform;
class mapDistribute;
/*---------------------------------------------------------------------------*\ /*---------------------------------------------------------------------------*\
Class InteractionLists Declaration Class InteractionLists Declaration
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
@ -100,10 +96,6 @@ class InteractionLists
//- mapDistribute to exchange wall face data //- mapDistribute to exchange wall face data
autoPtr<mapDistribute> wallFaceMapPtr_; autoPtr<mapDistribute> wallFaceMapPtr_;
//- Storage and encoding/decoding for all possible transforms
// of the geometry
globalIndexAndTransform globalTransforms_;
//- Maximum distance over which interactions will be detected //- Maximum distance over which interactions will be detected
scalar maxDistance_; scalar maxDistance_;
@ -259,9 +251,6 @@ public:
//- Return access to the wallFaceMap //- Return access to the wallFaceMap
inline const mapDistribute& wallFaceMap() const; inline const mapDistribute& wallFaceMap() const;
//- Return access to the globalTransforms
inline const globalIndexAndTransform& globalTransforms() const;
//- Return access to the direct interaction list //- Return access to the direct interaction list
inline const labelListList& dil() const; inline const labelListList& dil() const;

10
src/lagrangian/basic/InteractionLists/InteractionListsI.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2008-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2008-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -50,14 +50,6 @@ Foam::InteractionLists<ParticleType>::wallFaceMap() const
} }
template<class ParticleType>
const Foam::globalIndexAndTransform&
Foam::InteractionLists<ParticleType>::globalTransforms() const
{
return globalTransforms_;
}
template<class ParticleType> template<class ParticleType>
const Foam::labelListList& Foam::InteractionLists<ParticleType>::dil() const const Foam::labelListList& Foam::InteractionLists<ParticleType>::dil() const
{ {

2
src/lagrangian/basic/Make/files
View File

@ -4,8 +4,6 @@ indexedParticle = indexedParticle
$(passiveParticle)/passiveParticleCloud.C $(passiveParticle)/passiveParticleCloud.C
$(indexedParticle)/indexedParticleCloud.C $(indexedParticle)/indexedParticleCloud.C
InteractionLists/globalIndexAndTransform/globalIndexAndTransform.C
InteractionLists/globalIndexAndTransform/vectorTensorTransform/vectorTensorTransform.C
InteractionLists/referredWallFace/referredWallFace.C InteractionLists/referredWallFace/referredWallFace.C
LIB = $(FOAM_LIBBIN)/liblagrangian LIB = $(FOAM_LIBBIN)/liblagrangian

164
src/lagrangian/intermediate/clouds/Templates/KinematicCloud/KinematicCloud.C
View File

@ -74,7 +74,7 @@ Foam::KinematicCloud<ParcelType>::cloudSolution::cloudSolution
coupled_(false), coupled_(false),
cellValueSourceCorrection_(false), cellValueSourceCorrection_(false),
maxTrackTime_(0.0), maxTrackTime_(0.0),
resetSourcesOnStartup_(false) resetSourcesOnStartup_(true)
{ {
if (active_) if (active_)
{ {
@ -188,6 +188,84 @@ bool Foam::KinematicCloud<ParcelType>::cloudSolution::output() const
// * * * * * * * * * * * * * Protected Member Functions * * * * * * * * * * // // * * * * * * * * * * * * * Protected Member Functions * * * * * * * * * * //
template<class ParcelType>
void Foam::KinematicCloud<ParcelType>::setModels()
{
collisionModel_.reset
(
CollisionModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
).ptr()
);
dispersionModel_.reset
(
DispersionModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
).ptr()
);
dragModel_.reset
(
DragModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
).ptr()
);
injectionModel_.reset
(
InjectionModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
).ptr()
);
patchInteractionModel_.reset
(
PatchInteractionModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
).ptr()
);
postProcessingModel_.reset
(
PostProcessingModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
).ptr()
);
surfaceFilmModel_.reset
(
SurfaceFilmModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this,
g_
).ptr()
);
UIntegrator_.reset
(
vectorIntegrationScheme::New
(
"U",
solution_.integrationSchemes()
).ptr()
);
}
template<class ParcelType> template<class ParcelType>
void Foam::KinematicCloud<ParcelType>::solve void Foam::KinematicCloud<ParcelType>::solve
( (
@ -450,8 +528,8 @@ Foam::KinematicCloud<ParcelType>::KinematicCloud
) )
), ),
solution_(mesh_, particleProperties_.subDict("solution")), solution_(mesh_, particleProperties_.subDict("solution")),
constProps_(particleProperties_), constProps_(particleProperties_, solution_.active()),
subModelProperties_(particleProperties_.subDict("subModels")), subModelProperties_(particleProperties_.subOrEmptyDict("subModels")),
rndGen_ rndGen_
( (
label(0), label(0),
@ -462,72 +540,15 @@ Foam::KinematicCloud<ParcelType>::KinematicCloud
U_(U), U_(U),
mu_(mu), mu_(mu),
g_(g), g_(g),
forces_(mesh_, particleProperties_, g_.value()), forces_(mesh_, particleProperties_, g_.value(), solution_.active()),
collisionModel_ collisionModel_(NULL),
( dispersionModel_(NULL),
CollisionModel<KinematicCloud<ParcelType> >::New dragModel_(NULL),
( injectionModel_(NULL),
subModelProperties_, patchInteractionModel_(NULL),
*this postProcessingModel_(NULL),
) surfaceFilmModel_(NULL),
), UIntegrator_(NULL),
dispersionModel_
(
DispersionModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
)
),
dragModel_
(
DragModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
)
),
injectionModel_
(
InjectionModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
)
),
patchInteractionModel_
(
PatchInteractionModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
)
),
postProcessingModel_
(
PostProcessingModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this
)
),
surfaceFilmModel_
(
SurfaceFilmModel<KinematicCloud<ParcelType> >::New
(
subModelProperties_,
*this,
g
)
),
UIntegrator_
(
vectorIntegrationScheme::New
(
"U",
solution_.integrationSchemes()
)
),
UTrans_ UTrans_
( (
new DimensionedField<vector, volMesh> new DimensionedField<vector, volMesh>
@ -561,6 +582,11 @@ Foam::KinematicCloud<ParcelType>::KinematicCloud
) )
) )
{ {
if (solution_.active())
{
setModels();
}
if (readFields) if (readFields)
{ {
ParcelType::readFields(*this); ParcelType::readFields(*this);

6
src/lagrangian/intermediate/clouds/Templates/KinematicCloud/KinematicCloud.H
View File

@ -364,6 +364,12 @@ protected:
autoPtr<DimensionedField<scalar, volMesh> > UCoeff_; autoPtr<DimensionedField<scalar, volMesh> > UCoeff_;
// Initialisation
//- Set cloud sub-models
void setModels();
// Cloud evolution functions // Cloud evolution functions
//- Solve the cloud - calls all evolution functions //- Solve the cloud - calls all evolution functions

50
src/lagrangian/intermediate/clouds/Templates/ReactingCloud/ReactingCloud.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -30,6 +30,29 @@ License
// * * * * * * * * * * * Protected Member Functions * * * * * * * * * * * * // // * * * * * * * * * * * Protected Member Functions * * * * * * * * * * * * //
template<class ParcelType>
void Foam::ReactingCloud<ParcelType>::setModels()
{
compositionModel_.reset
(
CompositionModel<ReactingCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
).ptr()
);
phaseChangeModel_.reset
(
PhaseChangeModel<ReactingCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
).ptr()
);
}
template<class ParcelType> template<class ParcelType>
void Foam::ReactingCloud<ParcelType>::checkSuppliedComposition void Foam::ReactingCloud<ParcelType>::checkSuppliedComposition
( (
@ -85,26 +108,17 @@ Foam::ReactingCloud<ParcelType>::ReactingCloud
ThermoCloud<ParcelType>(cloudName, rho, U, g, thermo, false), ThermoCloud<ParcelType>(cloudName, rho, U, g, thermo, false),
reactingCloud(), reactingCloud(),
cloudCopyPtr_(NULL), cloudCopyPtr_(NULL),
constProps_(this->particleProperties()), constProps_(this->particleProperties(), this->solution().active()),
compositionModel_ compositionModel_(NULL),
( phaseChangeModel_(NULL),
CompositionModel<ReactingCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
)
),
phaseChangeModel_
(
PhaseChangeModel<ReactingCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
)
),
rhoTrans_(thermo.carrier().species().size()), rhoTrans_(thermo.carrier().species().size()),
dMassPhaseChange_(0.0) dMassPhaseChange_(0.0)
{ {
if (this->solution().active())
{
setModels();
}
// Set storage for mass source fields and initialise to zero // Set storage for mass source fields and initialise to zero
forAll(rhoTrans_, i) forAll(rhoTrans_, i)
{ {

8
src/lagrangian/intermediate/clouds/Templates/ReactingCloud/ReactingCloud.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -128,6 +128,12 @@ protected:
); );
// Initialisation
//- Set cloud sub-models
void setModels();
// Cloud evolution functions // Cloud evolution functions
//- Reset state of cloud //- Reset state of cloud

50
src/lagrangian/intermediate/clouds/Templates/ReactingMultiphaseCloud/ReactingMultiphaseCloud.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2008-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2008-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -30,6 +30,29 @@ License
// * * * * * * * * * * * * * Protected Member Functions * * * * * * * * * * // // * * * * * * * * * * * * * Protected Member Functions * * * * * * * * * * //
template<class ParcelType>
void Foam::ReactingMultiphaseCloud<ParcelType>::setModels()
{
devolatilisationModel_.reset
(
DevolatilisationModel<ReactingMultiphaseCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
).ptr()
);
surfaceReactionModel_.reset
(
SurfaceReactionModel<ReactingMultiphaseCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
).ptr()
);
}
template<class ParcelType> template<class ParcelType>
void Foam::ReactingMultiphaseCloud<ParcelType>::cloudReset void Foam::ReactingMultiphaseCloud<ParcelType>::cloudReset
( (
@ -62,26 +85,17 @@ Foam::ReactingMultiphaseCloud<ParcelType>::ReactingMultiphaseCloud
ReactingCloud<ParcelType>(cloudName, rho, U, g, thermo, false), ReactingCloud<ParcelType>(cloudName, rho, U, g, thermo, false),
reactingMultiphaseCloud(), reactingMultiphaseCloud(),
cloudCopyPtr_(NULL), cloudCopyPtr_(NULL),
constProps_(this->particleProperties()), constProps_(this->particleProperties(), this->solution().active()),
devolatilisationModel_ devolatilisationModel_(NULL),
( surfaceReactionModel_(NULL),
DevolatilisationModel<ReactingMultiphaseCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
)
),
surfaceReactionModel_
(
SurfaceReactionModel<ReactingMultiphaseCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
)
),
dMassDevolatilisation_(0.0), dMassDevolatilisation_(0.0),
dMassSurfaceReaction_(0.0) dMassSurfaceReaction_(0.0)
{ {
if (this->solution().active())
{
setModels();
}
if (readFields) if (readFields)
{ {
ParcelType::readFields(*this); ParcelType::readFields(*this);

8
src/lagrangian/intermediate/clouds/Templates/ReactingMultiphaseCloud/ReactingMultiphaseCloud.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2008-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2008-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -119,6 +119,12 @@ protected:
// Protected Member Functions // Protected Member Functions
// Initialisation
//- Set cloud sub-models
void setModels();
// Cloud evolution functions // Cloud evolution functions
//- Reset state of cloud //- Reset state of cloud

56
src/lagrangian/intermediate/clouds/Templates/ThermoCloud/ThermoCloud.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -30,6 +30,31 @@ License
// * * * * * * * * * * * * * Protected Member Functions * * * * * * * * * * // // * * * * * * * * * * * * * Protected Member Functions * * * * * * * * * * //
template<class ParcelType>
void Foam::ThermoCloud<ParcelType>::setModels()
{
heatTransferModel_.reset
(
HeatTransferModel<ThermoCloud<ParcelType> >::New
(
this->subModelProperties(),
*this
).ptr()
);
TIntegrator_.reset
(
scalarIntegrationScheme::New
(
"T",
this->solution().integrationSchemes()
).ptr()
);
this->subModelProperties().lookup("radiation") >> radiation_;
}
template<class ParcelType> template<class ParcelType>
void Foam::ThermoCloud<ParcelType>::cloudReset(ThermoCloud<ParcelType>& c) void Foam::ThermoCloud<ParcelType>::cloudReset(ThermoCloud<ParcelType>& c)
{ {
@ -66,27 +91,13 @@ Foam::ThermoCloud<ParcelType>::ThermoCloud
), ),
thermoCloud(), thermoCloud(),
cloudCopyPtr_(NULL), cloudCopyPtr_(NULL),
constProps_(this->particleProperties()), constProps_(this->particleProperties(), this->solution().active()),
thermo_(thermo), thermo_(thermo),
T_(thermo.thermo().T()), T_(thermo.thermo().T()),
p_(thermo.thermo().p()), p_(thermo.thermo().p()),
heatTransferModel_ heatTransferModel_(NULL),
( TIntegrator_(NULL),
HeatTransferModel<ThermoCloud<ParcelType> >::New radiation_(false),
(
this->subModelProperties(),
*this
)
),
TIntegrator_
(
scalarIntegrationScheme::New
(
"T",
this->solution().integrationSchemes()
)
),
radiation_(this->subModelProperties().lookup("radiation")),
hsTrans_ hsTrans_
( (
new DimensionedField<scalar, volMesh> new DimensionedField<scalar, volMesh>
@ -121,6 +132,11 @@ Foam::ThermoCloud<ParcelType>::ThermoCloud
) )
{ {
if (this->solution().active())
{
setModels();
}
if (readFields) if (readFields)
{ {
ParcelType::readFields(*this); ParcelType::readFields(*this);
@ -143,7 +159,7 @@ Foam::ThermoCloud<ParcelType>::ThermoCloud
KinematicCloud<ParcelType>(c, name), KinematicCloud<ParcelType>(c, name),
thermoCloud(), thermoCloud(),
cloudCopyPtr_(NULL), cloudCopyPtr_(NULL),
constProps_(c.particleProperties_), constProps_(c.constProps_),
thermo_(c.thermo_), thermo_(c.thermo_),
T_(c.T()), T_(c.T()),
p_(c.p()), p_(c.p()),

8
src/lagrangian/intermediate/clouds/Templates/ThermoCloud/ThermoCloud.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -128,6 +128,12 @@ protected:
// Protected Member Functions // Protected Member Functions
// Initialisation
//- Set cloud sub-models
void setModels();
// Cloud evolution functions // Cloud evolution functions
//- Reset state of cloud //- Reset state of cloud

20
src/lagrangian/intermediate/parcels/Templates/KinematicParcel/KinematicParcel.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -98,22 +98,22 @@ public:
//- Parcel type id - used for post-processing to flag the type //- Parcel type id - used for post-processing to flag the type
// of parcels issued by this cloud // of parcels issued by this cloud
const label parcelTypeId_; label parcelTypeId_;
//- Minimum density [kg/m3] //- Minimum density [kg/m3]
const scalar rhoMin_; scalar rhoMin_;
//- Particle density [kg/m3] (constant) //- Particle density [kg/m3] (constant)
const scalar rho0_; scalar rho0_;
//- Minimum particle mass [kg] //- Minimum particle mass [kg]
const scalar minParticleMass_; scalar minParticleMass_;
//- Young's modulus [N/m2] //- Young's modulus [N/m2]
const scalar youngsModulus_; scalar youngsModulus_;
//- Poisson's ratio //- Poisson's ratio
const scalar poissonsRatio_; scalar poissonsRatio_;
public: public:
@ -127,7 +127,11 @@ public:
constantProperties(const constantProperties& cp); constantProperties(const constantProperties& cp);
//- Constructor from dictionary //- Constructor from dictionary
constantProperties(const dictionary& parentDict); constantProperties
(
const dictionary& parentDict,
const bool readFields = true
);
// Member functions // Member functions

31
src/lagrangian/intermediate/parcels/Templates/KinematicParcel/KinematicParcelI.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -62,17 +62,28 @@ inline Foam::KinematicParcel<ParcelType>::constantProperties::constantProperties
template<class ParcelType> template<class ParcelType>
inline Foam::KinematicParcel<ParcelType>::constantProperties::constantProperties inline Foam::KinematicParcel<ParcelType>::constantProperties::constantProperties
( (
const dictionary& parentDict const dictionary& parentDict,
const bool readFields
) )
: :
dict_(parentDict.subDict("constantProperties")), dict_(parentDict.subOrEmptyDict("constantProperties")),
parcelTypeId_(readLabel(dict_.lookup("parcelTypeId"))), parcelTypeId_(-1),
rhoMin_(readScalar(dict_.lookup("rhoMin"))), rhoMin_(0.0),
rho0_(readScalar(dict_.lookup("rho0"))), rho0_(0.0),
minParticleMass_(readScalar(dict_.lookup("minParticleMass"))), minParticleMass_(0.0),
youngsModulus_(readScalar(dict_.lookup("youngsModulus"))), youngsModulus_(0.0),
poissonsRatio_(readScalar(dict_.lookup("poissonsRatio"))) poissonsRatio_(0.0)
{} {
if (readFields)
{
dict_.lookup("parcelTypeId") >> parcelTypeId_;
dict_.lookup("rhoMin") >> rhoMin_;
dict_.lookup("rho0") >> rho0_;
dict_.lookup("minParticleMass") >> minParticleMass_;
dict_.lookup("youngsModulus") >> youngsModulus_;
dict_.lookup("poissonsRatio") >> poissonsRatio_;
}
}
template<class ParcelType> template<class ParcelType>

10
src/lagrangian/intermediate/parcels/Templates/ReactingMultiphaseParcel/ReactingMultiphaseParcel.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2008-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2008-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -82,7 +82,7 @@ public:
// Private data // Private data
//- Latent heat of devolatilisation [J/kg] //- Latent heat of devolatilisation [J/kg]
const scalar LDevol_; scalar LDevol_;
//- Fraction of enthalpy retained by parcel due to surface //- Fraction of enthalpy retained by parcel due to surface
// reactions // reactions
@ -100,7 +100,11 @@ public:
constantProperties(const constantProperties& cp); constantProperties(const constantProperties& cp);
//- Constructor from dictionary //- Constructor from dictionary
constantProperties(const dictionary& parentDict); constantProperties
(
const dictionary& parentDict,
const bool readFields = true
);
// Access // Access

35
src/lagrangian/intermediate/parcels/Templates/ReactingMultiphaseParcel/ReactingMultiphaseParcelI.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2008-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2008-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -54,24 +54,31 @@ template<class ParcelType>
inline Foam::ReactingMultiphaseParcel<ParcelType>::constantProperties:: inline Foam::ReactingMultiphaseParcel<ParcelType>::constantProperties::
constantProperties constantProperties
( (
const dictionary& parentDict const dictionary& parentDict,
const bool readFields
) )
: :
ReactingParcel<ParcelType>::constantProperties(parentDict), ReactingParcel<ParcelType>::constantProperties(parentDict, readFields),
LDevol_(readScalar(this->dict().lookup("LDevol"))), LDevol_(0.0),
hRetentionCoeff_(readScalar(this->dict().lookup("hRetentionCoeff"))) hRetentionCoeff_(0.0)
{ {
if ((hRetentionCoeff_ < 0) || (hRetentionCoeff_ > 1)) if (readFields)
{ {
FatalErrorIn this->dict().lookup("LDevol") >> LDevol_;
( this->dict().lookup("hRetentionCoeff") >> hRetentionCoeff_;
"ReactingMultiphaseParcel<ParcelType>::constantProperties::"
"constantProperties"
) << "hRetentionCoeff must be in the range 0 to 1" << nl
<< exit(FatalError) << endl;
}
hRetentionCoeff_ = max(1e-06, hRetentionCoeff_); if ((hRetentionCoeff_ < 0) || (hRetentionCoeff_ > 1))
{
FatalErrorIn
(
"ReactingMultiphaseParcel<ParcelType>::constantProperties::"
"constantProperties"
) << "hRetentionCoeff must be in the range 0 to 1" << nl
<< exit(FatalError) << endl;
}
hRetentionCoeff_ = max(1e-06, hRetentionCoeff_);
}
} }

12
src/lagrangian/intermediate/parcels/Templates/ReactingParcel/ReactingParcel.H
View File

@ -77,16 +77,16 @@ public:
// Private data // Private data
//- Minimum pressure [Pa] //- Minimum pressure [Pa]
const scalar pMin_; scalar pMin_;
//- Constant volume flag - e.g. during mass transfer //- Constant volume flag - e.g. during mass transfer
Switch constantVolume_; Switch constantVolume_;
//- Vaporisation temperature [K] //- Vaporisation temperature [K]
const scalar Tvap_; scalar Tvap_;
//- Boiling point [K] //- Boiling point [K]
const scalar Tbp_; scalar Tbp_;
public: public:
@ -100,7 +100,11 @@ public:
constantProperties(const constantProperties& cp); constantProperties(const constantProperties& cp);
//- Constructor from dictionary //- Constructor from dictionary
constantProperties(const dictionary& parentDict); constantProperties
(
const dictionary& parentDict,
const bool readFields = true
);
// Access // Access

25
src/lagrangian/intermediate/parcels/Templates/ReactingParcel/ReactingParcelI.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -54,15 +54,24 @@ inline Foam::ReactingParcel<ParcelType>::constantProperties::constantProperties
template<class ParcelType> template<class ParcelType>
inline Foam::ReactingParcel<ParcelType>::constantProperties::constantProperties inline Foam::ReactingParcel<ParcelType>::constantProperties::constantProperties
( (
const dictionary& parentDict const dictionary& parentDict,
const bool readFields
) )
: :
ThermoParcel<ParcelType>::constantProperties(parentDict), ThermoParcel<ParcelType>::constantProperties(parentDict, readFields),
pMin_(readScalar(this->dict().lookup("pMin"))), pMin_(0.0),
constantVolume_(this->dict().lookup("constantVolume")), constantVolume_(false),
Tvap_(readScalar(this->dict().lookup("Tvap"))), Tvap_(0.0),
Tbp_(readScalar(this->dict().lookup("Tbp"))) Tbp_(0.0)
{} {
if (readFields)
{
this->dict().lookup("pMin") >> pMin_;
this->dict().lookup("constantVolume") >> constantVolume_;
this->dict().lookup("Tvap") >> Tvap_;
this->dict().lookup("Tbp") >> Tbp_;
}
}
template<class ParcelType> template<class ParcelType>

18
src/lagrangian/intermediate/parcels/Templates/ThermoParcel/ThermoParcel.H
View File

@ -77,22 +77,22 @@ public:
// Private data // Private data
//- Particle initial temperature [K] //- Particle initial temperature [K]
const scalar T0_; scalar T0_;
//- Minimum temperature [K] //- Minimum temperature [K]
const scalar TMin_; scalar TMin_;
//- Particle specific heat capacity [J/(kg.K)] //- Particle specific heat capacity [J/(kg.K)]
const scalar Cp0_; scalar Cp0_;
//- Particle emissivity [] (radiation) //- Particle emissivity [] (radiation)
const scalar epsilon0_; scalar epsilon0_;
//- Particle scattering factor [] (radiation) //- Particle scattering factor [] (radiation)
const scalar f0_; scalar f0_;
//- Default carrier Prandtl number [] //- Default carrier Prandtl number []
const scalar Pr_; scalar Pr_;
public: public:
@ -106,7 +106,11 @@ public:
constantProperties(const constantProperties& cp); constantProperties(const constantProperties& cp);
//- Constructor from dictionary //- Constructor from dictionary
constantProperties(const dictionary& parentDict); constantProperties
(
const dictionary& parentDict,
const bool readFields = true
);
// Member functions // Member functions

31
src/lagrangian/intermediate/parcels/Templates/ThermoParcel/ThermoParcelI.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -57,17 +57,28 @@ inline Foam::ThermoParcel<ParcelType>::constantProperties::constantProperties
template<class ParcelType> template<class ParcelType>
inline Foam::ThermoParcel<ParcelType>::constantProperties::constantProperties inline Foam::ThermoParcel<ParcelType>::constantProperties::constantProperties
( (
const dictionary& parentDict const dictionary& parentDict,
const bool readFields
) )
: :
KinematicParcel<ParcelType>::constantProperties(parentDict), KinematicParcel<ParcelType>::constantProperties(parentDict, readFields),
T0_(readScalar(this->dict().lookup("T0"))), T0_(0.0),
TMin_(readScalar(this->dict().lookup("TMin"))), TMin_(0.0),
Cp0_(readScalar(this->dict().lookup("Cp0"))), Cp0_(0.0),
epsilon0_(readScalar(this->dict().lookup("epsilon0"))), epsilon0_(0.0),
f0_(readScalar(this->dict().lookup("f0"))), f0_(0.0),
Pr_(readScalar(this->dict().lookup("Pr"))) Pr_(0.0)
{} {
if (readFields)
{
this->dict().lookup("T0") >> T0_;
this->dict().lookup("TMin") >> TMin_;
this->dict().lookup("Cp0") >> Cp0_;
this->dict().lookup("epsilon0") >> epsilon0_;
this->dict().lookup("f0") >> f0_;
this->dict().lookup("Pr") >> Pr_;
}
}
template<class ParcelType> template<class ParcelType>

50
src/lagrangian/intermediate/particleForces/particleForces.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2008-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2008-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -74,32 +74,41 @@ Foam::particleForces::particleForces
( (
const fvMesh& mesh, const fvMesh& mesh,
const dictionary& dict, const dictionary& dict,
const vector& g const vector& g,
const bool readFields
) )
: :
mesh_(mesh), mesh_(mesh),
dict_(dict.subDict("particleForces")), dict_(dict.subOrEmptyDict("particleForces")),
g_(g), g_(g),
gradUPtr_(NULL), gradUPtr_(NULL),
HdotGradHInterPtr_(NULL), HdotGradHInterPtr_(NULL),
gravity_(dict_.lookup("gravity")), gravity_(false),
virtualMass_(dict_.lookup("virtualMass")), virtualMass_(false),
Cvm_(0.0), Cvm_(0.0),
pressureGradient_(dict_.lookup("pressureGradient")), pressureGradient_(false),
paramagnetic_(dict_.lookup("paramagnetic")), paramagnetic_(false),
magneticSusceptibility_(0.0), magneticSusceptibility_(0.0),
refFrame_(rfInertial), refFrame_(rfInertial),
UName_(dict_.lookupOrDefault<word>("UName", "U")), UName_(dict_.lookupOrDefault<word>("UName", "U")),
HdotGradHName_(dict_.lookupOrDefault<word>("HdotGradHName", "HdotGradH")) HdotGradHName_(dict_.lookupOrDefault<word>("HdotGradHName", "HdotGradH"))
{ {
if (virtualMass_) if (readFields)
{ {
dict_.lookup("Cvm") >> Cvm_; dict_.lookup("gravity") >> gravity_;
} dict_.lookup("virtualMass") >> virtualMass_;
dict_.lookup("pressureGradient") >> pressureGradient_;
dict_.lookup("paramagnetic") >> paramagnetic_;
if (paramagnetic_) if (virtualMass_)
{ {
dict_.lookup("magneticSusceptibility") >> magneticSusceptibility_; dict_.lookup("Cvm") >> Cvm_;
}
if (paramagnetic_)
{
dict_.lookup("magneticSusceptibility") >> magneticSusceptibility_;
}
} }
if (dict_.found("referenceFrame")) if (dict_.found("referenceFrame"))
@ -116,9 +125,10 @@ Foam::particleForces::particleForces
( (
"Foam::particleForces::particleForces" "Foam::particleForces::particleForces"
"(" "("
"const fvMesh& mesh," "const fvMesh&, "
"const dictionary& dict," "const dictionary&, "
"const vector& g" "const vector&, "
"const bool"
")" ")"
) )
<< "Unknown referenceFrame, options are inertial and SRF." << "Unknown referenceFrame, options are inertial and SRF."
@ -235,10 +245,8 @@ void Foam::particleForces::cacheFields
if (paramagnetic_) if (paramagnetic_)
{ {
const volVectorField& HdotGradH = mesh_.lookupObject<volVectorField> const volVectorField& HdotGradH =
( mesh_.lookupObject<volVectorField>(HdotGradHName_);
HdotGradHName_
);
HdotGradHInterPtr_ = interpolation<vector>::New HdotGradHInterPtr_ = interpolation<vector>::New
( (
@ -329,7 +337,7 @@ Foam::vector Foam::particleForces::calcNonCoupled
// *magneticSusceptibility_/(magneticSusceptibility_ + 3) // *magneticSusceptibility_/(magneticSusceptibility_ + 3)
// *HdotGradH[cellI]; // *HdotGradH[cellI];
// which is divided by mass ((4/3)*pi*r^3*rho) to produce // which is divided by mass (pi*d^3*rho/6) to produce
// acceleration // acceleration
} }

5
src/lagrangian/intermediate/particleForces/particleForces.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2008-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2008-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -134,7 +134,8 @@ public:
( (
const fvMesh& mesh, const fvMesh& mesh,
const dictionary& dict, const dictionary& dict,
const vector& g const vector& g,
const bool readFields = true
); );
//- Construct copy //- Construct copy

4
src/mesh/autoMesh/autoHexMesh/meshRefinement/meshRefinement.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -1791,7 +1791,7 @@ Foam::autoPtr<Foam::mapPolyMesh> Foam::meshRefinement::splitMeshRegions
"meshRefinement::splitMeshRegions(const point&)" "meshRefinement::splitMeshRegions(const point&)"
) << "Point " << keepPoint ) << "Point " << keepPoint
<< " is not inside the mesh." << nl << " is not inside the mesh." << nl
<< "Bounding box of the mesh:" << mesh_.globalData().bb() << "Bounding box of the mesh:" << mesh_.bounds()
<< exit(FatalError); << exit(FatalError);
} }

8
src/mesh/autoMesh/autoHexMesh/meshRefinement/meshRefinementBaffles.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -1263,7 +1263,7 @@ void Foam::meshRefinement::findCellZoneInsideWalk
", const labelList&, const labelList&)" ", const labelList&, const labelList&)"
) << "Point " << insidePoint ) << "Point " << insidePoint
<< " is not inside the mesh." << nl << " is not inside the mesh." << nl
<< "Bounding box of the mesh:" << mesh_.globalData().bb() << "Bounding box of the mesh:" << mesh_.bounds()
<< exit(FatalError); << exit(FatalError);
} }
@ -1431,7 +1431,7 @@ void Foam::meshRefinement::findCellZoneTopo
"(const point&, const labelList&, const labelList&, labelList&)" "(const point&, const labelList&, const labelList&, labelList&)"
) << "Point " << keepPoint ) << "Point " << keepPoint
<< " is not inside the mesh." << nl << " is not inside the mesh." << nl
<< "Bounding box of the mesh:" << mesh_.globalData().bb() << "Bounding box of the mesh:" << mesh_.bounds()
<< exit(FatalError); << exit(FatalError);
} }
@ -1972,7 +1972,7 @@ Foam::autoPtr<Foam::mapPolyMesh> Foam::meshRefinement::splitMesh
"(const label, const labelList&, const point&)" "(const label, const labelList&, const point&)"
) << "Point " << keepPoint ) << "Point " << keepPoint
<< " is not inside the mesh." << nl << " is not inside the mesh." << nl
<< "Bounding box of the mesh:" << mesh_.globalData().bb() << "Bounding box of the mesh:" << mesh_.bounds()
<< exit(FatalError); << exit(FatalError);
} }

108
src/meshTools/indexedOctree/indexedOctree.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -1623,58 +1623,76 @@ void Foam::indexedOctree<Type>::traverseNode
{ {
const labelList& indices = contents_[getContent(index)]; const labelList& indices = contents_[getContent(index)];
if (findAny) if (indices.size())
{ {
// Find any intersection if (findAny)
forAll(indices, elemI)
{ {
label shapeI = indices[elemI]; // Find any intersection
point pt; forAll(indices, elemI)
bool hit = shapes_.intersects(shapeI, start, end, pt);
if (hit)
{ {
// Hit so pt is nearer than nearestPoint. label shapeI = indices[elemI];
// Update hit info
hitInfo.setHit(); point pt;
hitInfo.setIndex(shapeI); bool hit = shapes_.intersects(shapeI, start, end, pt);
hitInfo.setPoint(pt);
// Note that intersection of shape might actually be
// in a neighbouring box. For findAny this is not important.
if (hit)
{
// Hit so pt is nearer than nearestPoint.
// Update hit info
hitInfo.setHit();
hitInfo.setIndex(shapeI);
hitInfo.setPoint(pt);
return;
}
}
}
else
{
// Find nearest intersection
const treeBoundBox octantBb(subBbox(nodeI, octant));
point nearestPoint(end);
forAll(indices, elemI)
{
label shapeI = indices[elemI];
point pt;
bool hit = shapes_.intersects
(
shapeI,
start,
nearestPoint,
pt
);
// Note that intersection of shape might actually be
// in a neighbouring box. Since we need to maintain strict
// (findAny=false) ordering skip such an intersection. It
// will be found when we are doing the next box.
if (hit && octantBb.contains(pt))
{
// Hit so pt is nearer than nearestPoint.
nearestPoint = pt;
// Update hit info
hitInfo.setHit();
hitInfo.setIndex(shapeI);
hitInfo.setPoint(pt);
}
}
if (hitInfo.hit())
{
// Found intersected shape.
return; return;
} }
} }
} }
else
{
// Find nearest intersection.
point nearestPoint(end);
forAll(indices, elemI)
{
label shapeI = indices[elemI];
point pt;
bool hit = shapes_.intersects(shapeI, start, nearestPoint, pt);
if (hit)
{
// Hit so pt is nearer than nearestPoint.
nearestPoint = pt;
// Update hit info
hitInfo.setHit();
hitInfo.setIndex(shapeI);
hitInfo.setPoint(pt);
}
}
if (hitInfo.hit())
{
// Found intersected shape.
return;
}
}
} }
// Nothing intersected in this node // Nothing intersected in this node

22
src/meshTools/meshSearch/meshSearch.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -101,9 +101,11 @@ Foam::label Foam::meshSearch::findNearestCellTree(const point& location) const
{ {
const indexedOctree<treeDataCell>& tree = cellTree(); const indexedOctree<treeDataCell>& tree = cellTree();
scalar span = tree.bb().mag(); pointIndexHit info = tree.findNearest
(
pointIndexHit info = tree.findNearest(location, Foam::sqr(span)); location,
magSqr(tree.bb().max()-tree.bb().min())
);
if (!info.hit()) if (!info.hit())
{ {
@ -178,10 +180,12 @@ Foam::label Foam::meshSearch::findNearestFaceTree(const point& location) const
// Search nearest cell centre. // Search nearest cell centre.
const indexedOctree<treeDataCell>& tree = cellTree(); const indexedOctree<treeDataCell>& tree = cellTree();
scalar span = tree.bb().mag();
// Search with decent span // Search with decent span
pointIndexHit info = tree.findNearest(location, Foam::sqr(span)); pointIndexHit info = tree.findNearest
(
location,
magSqr(tree.bb().max()-tree.bb().min())
);
if (!info.hit()) if (!info.hit())
{ {
@ -767,12 +771,10 @@ Foam::label Foam::meshSearch::findNearestBoundaryFace
{ {
const indexedOctree<treeDataFace>& tree = boundaryTree(); const indexedOctree<treeDataFace>& tree = boundaryTree();
scalar span = tree.bb().mag();
pointIndexHit info = boundaryTree().findNearest pointIndexHit info = boundaryTree().findNearest
( (
location, location,
Foam::sqr(span) magSqr(tree.bb().max()-tree.bb().min())
); );
if (!info.hit()) if (!info.hit())

4
src/meshTools/sets/cellSources/regionToCell/regionToCell.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -135,7 +135,7 @@ void Foam::regionToCell::combine(topoSet& set, const bool add) const
"regionToCell::combine(topoSet&, const bool) const" "regionToCell::combine(topoSet&, const bool) const"
) << "Point " << insidePoint_ ) << "Point " << insidePoint_
<< " is not inside the mesh." << nl << " is not inside the mesh." << nl
<< "Bounding box of the mesh:" << mesh_.globalData().bb() << "Bounding box of the mesh:" << mesh_.bounds()
<< endl; << endl;
return; return;
} }

1
src/parallel/decompose/Allwmake
View File

@ -17,7 +17,6 @@ set -x
wmakeLnInclude decompositionMethods wmakeLnInclude decompositionMethods
wmake libso scotchDecomp wmake libso scotchDecomp
wmake libso metisDecomp
if [ -d "$FOAM_LIBBIN/$FOAM_MPI" ] if [ -d "$FOAM_LIBBIN/$FOAM_MPI" ]
then then

25
src/parallel/decompose/decompositionMethods/multiLevelDecomp/multiLevelDecomp.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -75,6 +75,14 @@ void Foam::multiLevelDecomp::subsetGlobalCellCells
labelList allDist(dist); labelList allDist(dist);
map.distribute(allDist); map.distribute(allDist);
// Now we have:
// oldToNew : the locally-compact numbering of all our cellCells. -1 if
// cellCell is not in set.
// allDist : destination domain for all our cellCells
// subCellCells : indexes into oldToNew and allDist
// Globally compact numbering for cells in set.
globalIndex globalSubCells(set.size());
// Now subCellCells contains indices into oldToNew which are the // Now subCellCells contains indices into oldToNew which are the
// new locations of the neighbouring cells. // new locations of the neighbouring cells.
@ -90,14 +98,23 @@ void Foam::multiLevelDecomp::subsetGlobalCellCells
label newI = 0; label newI = 0;
forAll(cCells, i) forAll(cCells, i)
{ {
label subCellI = oldToNew[cCells[i]]; // Get locally-compact cell index of neighbouring cell
if (subCellI == -1) label nbrCellI = oldToNew[cCells[i]];
if (nbrCellI == -1)
{ {
cutConnections[allDist[cCells[i]]]++; cutConnections[allDist[cCells[i]]]++;
} }
else else
{ {
cCells[newI++] = subCellI; // Reconvert local cell index into global one
// Get original neighbour
label cellI = set[subCellI];
label oldNbrCellI = cellCells[cellI][i];
// Get processor from original neighbour
label procI = globalCells.whichProcID(oldNbrCellI);
// Convert into global compact numbering
cCells[newI++] = globalSubCells.toGlobal(procI, nbrCellI);
} }
} }
cCells.setSize(newI); cCells.setSize(newI);

3
src/parallel/decompose/decompositionMethods/structuredDecomp/structuredDecomp.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -25,7 +25,6 @@ License
#include "structuredDecomp.H" #include "structuredDecomp.H"
#include "addToRunTimeSelectionTable.H" #include "addToRunTimeSelectionTable.H"
#include "IFstream.H"
#include "FaceCellWave.H" #include "FaceCellWave.H"
#include "topoDistanceData.H" #include "topoDistanceData.H"
#include "fvMeshSubset.H" #include "fvMeshSubset.H"

146
src/parallel/decompose/ptscotchDecomp/ptscotchDecomp.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -102,6 +102,14 @@ License
} }
Note: writes out .dgr files for debugging. Run with e.g.
mpirun -np 4 dgpart 2 'processor%r.grf'
- %r gets replaced by current processor rank
- decompose into 2 domains
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
#include "ptscotchDecomp.H" #include "ptscotchDecomp.H"
@ -161,6 +169,7 @@ void Foam::ptscotchDecomp::check(const int retVal, const char* str)
//- Does prevention of 0 cell domains and calls ptscotch. //- Does prevention of 0 cell domains and calls ptscotch.
Foam::label Foam::ptscotchDecomp::decomposeZeroDomains Foam::label Foam::ptscotchDecomp::decomposeZeroDomains
( (
const fileName& meshPath,
const List<int>& initadjncy, const List<int>& initadjncy,
const List<int>& initxadj, const List<int>& initxadj,
const scalarField& initcWeights, const scalarField& initcWeights,
@ -184,6 +193,7 @@ Foam::label Foam::ptscotchDecomp::decomposeZeroDomains
{ {
return decompose return decompose
( (
meshPath,
initadjncy, initadjncy,
initxadj, initxadj,
initcWeights, initcWeights,
@ -287,7 +297,7 @@ Foam::label Foam::ptscotchDecomp::decomposeZeroDomains
// Do decomposition as normal. Sets finalDecomp. // Do decomposition as normal. Sets finalDecomp.
label result = decompose(adjncy, xadj, cWeights, finalDecomp); label result = decompose(meshPath, adjncy, xadj, cWeights, finalDecomp);
if (debug) if (debug)
@ -344,6 +354,7 @@ Foam::label Foam::ptscotchDecomp::decomposeZeroDomains
// Call scotch with options from dictionary. // Call scotch with options from dictionary.
Foam::label Foam::ptscotchDecomp::decompose Foam::label Foam::ptscotchDecomp::decompose
( (
const fileName& meshPath,
const List<int>& adjncy, const List<int>& adjncy,
const List<int>& xadj, const List<int>& xadj,
const scalarField& cWeights, const scalarField& cWeights,
@ -356,58 +367,82 @@ Foam::label Foam::ptscotchDecomp::decompose
Pout<< "ptscotchDecomp : entering with xadj:" << xadj.size() << endl; Pout<< "ptscotchDecomp : entering with xadj:" << xadj.size() << endl;
} }
// // Dump graph
// if (decompositionDict_.found("ptscotchCoeffs"))
// {
// const dictionary& scotchCoeffs =
// decompositionDict_.subDict("ptscotchCoeffs");
//
// if (scotchCoeffs.lookupOrDefault("writeGraph", false))
// {
// OFstream str(mesh_.time().path() / mesh_.name() + ".grf");
//
// Info<< "Dumping Scotch graph file to " << str.name() << endl
// << "Use this in combination with gpart." << endl;
//
// // Distributed graph file (.grf)
// label version = 2;
// str << version << nl;
// // Number of files
// // Number of files (procglbnbr) if (debug)
// str << Pstream::nProcs(); {
// // My file number (procloc) Pout<< "nProcessors_:" << nProcessors_ << endl;
// str << ' ' << Pstream::myProcNo() << nl;
// globalIndex globalCells(xadj.size()-1);
// // Total number of vertices (vertglbnbr)
// str << returnReduce(mesh.nCells(), sumOp<label>()); Pout<< "Xadj:" << endl;
// // Total number of connections (edgeglbnbr) for (label cellI = 0; cellI < xadj.size()-1; cellI++)
// str << ' ' << returnReduce(xadj[mesh.nCells()], sumOp<label>()) {
// << nl; Pout<< "cell:" << cellI
// // Local number of vertices (vertlocnbr) << " global:" << globalCells.toGlobal(cellI)
// str << mesh.nCells(); << " connected to:" << endl;
// // Local number of connections (edgelocnbr) label start = xadj[cellI];
// str << ' ' << xadj[mesh.nCells()] << nl; label end = xadj[cellI+1];
// // Numbering starts from 0 for (label i = start; i < end; i++)
// label baseval = 0; {
// // Start of my global vertices (procdsptab[proclocnum]) Pout<< " cell:" << adjncy[i] << endl;
// str << ' ' << globalCells.toGlobal(0); }
// 100*hasVertlabels+10*hasEdgeWeights+1*hasVertWeighs }
// str << ' ' << "0" << nl; Pout<< endl;
// for (label cellI = 0; cellI < xadj.size()-1; cellI++) }
// {
// label start = xadj[cellI]; // Dump graph
// label end = xadj[cellI+1]; if (decompositionDict_.found("ptscotchCoeffs"))
// str << end-start; {
// const dictionary& scotchCoeffs =
// for (label i = start; i < end; i++) decompositionDict_.subDict("ptscotchCoeffs");
// {
// str << ' ' << adjncy[i]; if (scotchCoeffs.lookupOrDefault("writeGraph", false))
// } {
// str << nl; OFstream str
// } (
// } meshPath + "_" + Foam::name(Pstream::myProcNo()) + ".dgr"
// } );
Pout<< "Dumping Scotch graph file to " << str.name() << endl
<< "Use this in combination with dgpart." << endl;
globalIndex globalCells(xadj.size()-1);
// Distributed graph file (.grf)
label version = 2;
str << version << nl;
// Number of files (procglbnbr)
str << Pstream::nProcs();
// My file number (procloc)
str << ' ' << Pstream::myProcNo() << nl;
// Total number of vertices (vertglbnbr)
str << globalCells.size();
// Total number of connections (edgeglbnbr)
str << ' ' << returnReduce(xadj[xadj.size()-1], sumOp<label>())
<< nl;
// Local number of vertices (vertlocnbr)
str << xadj.size()-1;
// Local number of connections (edgelocnbr)
str << ' ' << xadj[xadj.size()-1] << nl;
// Numbering starts from 0
label baseval = 0;
// 100*hasVertlabels+10*hasEdgeWeights+1*hasVertWeighs
str << baseval << ' ' << "000" << nl;
for (label cellI = 0; cellI < xadj.size()-1; cellI++)
{
label start = xadj[cellI];
label end = xadj[cellI+1];
str << end-start;
for (label i = start; i < end; i++)
{
str << ' ' << adjncy[i];
}
str << nl;
}
}
}
// Strategy // Strategy
// ~~~~~~~~ // ~~~~~~~~
@ -487,7 +522,7 @@ Foam::label Foam::ptscotchDecomp::decompose
if (debug) if (debug)
{ {
Pout<< "SCOTCH_dgraphBuild with:" << nl Pout<< "SCOTCH_dgraphBuild with:" << nl
<< "xadj.size() : " << xadj.size()-1 << nl << "xadj.size()-1 : " << xadj.size()-1 << nl
<< "xadj : " << long(xadj.begin()) << nl << "xadj : " << long(xadj.begin()) << nl
<< "velotab : " << long(velotab.begin()) << nl << "velotab : " << long(velotab.begin()) << nl
<< "adjncy.size() : " << adjncy.size() << nl << "adjncy.size() : " << adjncy.size() << nl
@ -693,6 +728,7 @@ Foam::labelList Foam::ptscotchDecomp::decompose
List<int> finalDecomp; List<int> finalDecomp;
decomposeZeroDomains decomposeZeroDomains
( (
mesh.time().path()/mesh.name(),
cellCells.m(), cellCells.m(),
cellCells.offsets(), cellCells.offsets(),
pointWeights, pointWeights,
@ -744,6 +780,7 @@ Foam::labelList Foam::ptscotchDecomp::decompose
List<int> finalDecomp; List<int> finalDecomp;
decomposeZeroDomains decomposeZeroDomains
( (
mesh.time().path()/mesh.name(),
cellCells.m(), cellCells.m(),
cellCells.offsets(), cellCells.offsets(),
pointWeights, pointWeights,
@ -797,6 +834,7 @@ Foam::labelList Foam::ptscotchDecomp::decompose
List<int> finalDecomp; List<int> finalDecomp;
decomposeZeroDomains decomposeZeroDomains
( (
"ptscotch",
cellCells.m(), cellCells.m(),
cellCells.offsets(), cellCells.offsets(),
cWeights, cWeights,

4
src/parallel/decompose/ptscotchDecomp/ptscotchDecomp.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -63,6 +63,7 @@ class ptscotchDecomp
//- Decompose with optionally zero sized domains //- Decompose with optionally zero sized domains
label decomposeZeroDomains label decomposeZeroDomains
( (
const fileName& meshPath,
const List<int>& initadjncy, const List<int>& initadjncy,
const List<int>& initxadj, const List<int>& initxadj,
const scalarField& initcWeights, const scalarField& initcWeights,
@ -72,6 +73,7 @@ class ptscotchDecomp
//- Decompose //- Decompose
label decompose label decompose
( (
const fileName& meshPath,
const List<int>& adjncy, const List<int>& adjncy,
const List<int>& xadj, const List<int>& xadj,
const scalarField& cWeights, const scalarField& cWeights,

18
src/postProcessing/functionObjects/field/streamLine/streamLineParticle.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -182,7 +182,7 @@ bool Foam::streamLineParticle::move
td.keepParticle = true; td.keepParticle = true;
scalar tEnd = (1.0 - stepFraction())*trackTime; scalar tEnd = (1.0 - stepFraction())*trackTime;
scalar dtMax = tEnd; scalar maxDt = cloud_.pMesh().bounds().mag();
while while
( (
@ -192,7 +192,7 @@ bool Foam::streamLineParticle::move
) )
{ {
// set the lagrangian time-step // set the lagrangian time-step
scalar dt = min(dtMax, tEnd); scalar dt = maxDt;
// Cross cell in steps: // Cross cell in steps:
// - at subiter 0 calculate dt to cross cell in nSubCycle steps // - at subiter 0 calculate dt to cross cell in nSubCycle steps
@ -210,6 +210,16 @@ bool Foam::streamLineParticle::move
U = -U; U = -U;
} }
scalar magU = mag(U);
if (magU < SMALL)
{
// Stagnant particle. Might as well stop
lifeTime_ = 0;
break;
}
U /= magU;
if (subIter == 0 && td.nSubCycle_ > 1) if (subIter == 0 && td.nSubCycle_ > 1)
{ {
@ -219,7 +229,7 @@ bool Foam::streamLineParticle::move
else if (subIter == td.nSubCycle_ - 1) else if (subIter == td.nSubCycle_ - 1)
{ {
// Do full step on last subcycle // Do full step on last subcycle
dt = min(dtMax, tEnd); dt = maxDt;
} }

2
src/sampling/sampledSurface/sampledSurfaces/sampledSurfaces.C
View File

@ -341,7 +341,7 @@ bool Foam::sampledSurfaces::update()
} }
// dimension as fraction of mesh bounding box // dimension as fraction of mesh bounding box
scalar mergeDim = mergeTol_ * mesh_.globalData().bb().mag(); scalar mergeDim = mergeTol_ * mesh_.bounds().mag();
if (Pstream::master() && debug) if (Pstream::master() && debug)
{ {

284
src/sampling/sampledSurface/sampledTriSurfaceMesh/sampledTriSurfaceMesh.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -28,6 +28,7 @@ License
#include "Tuple2.H" #include "Tuple2.H"
#include "globalIndex.H" #include "globalIndex.H"
#include "treeDataCell.H" #include "treeDataCell.H"
#include "treeDataFace.H"
#include "addToRunTimeSelectionTable.H" #include "addToRunTimeSelectionTable.H"
@ -43,6 +44,17 @@ namespace Foam
word word
); );
template<>
const char* NamedEnum<sampledTriSurfaceMesh::samplingSource, 2>::names[] =
{
"cells",
"boundaryFaces"
};
const NamedEnum<sampledTriSurfaceMesh::samplingSource, 2>
sampledTriSurfaceMesh::samplingSourceNames_;
//- Private class for finding nearest //- Private class for finding nearest
// - global index // - global index
// - sqr(distance) // - sqr(distance)
@ -70,7 +82,8 @@ Foam::sampledTriSurfaceMesh::sampledTriSurfaceMesh
( (
const word& name, const word& name,
const polyMesh& mesh, const polyMesh& mesh,
const word& surfaceName const word& surfaceName,
const samplingSource sampleSource
) )
: :
sampledSurface(name, mesh), sampledSurface(name, mesh),
@ -78,7 +91,7 @@ Foam::sampledTriSurfaceMesh::sampledTriSurfaceMesh
( (
IOobject IOobject
( (
name, surfaceName,
mesh.time().constant(), // instance mesh.time().constant(), // instance
"triSurface", // local "triSurface", // local
mesh, // registry mesh, // registry
@ -87,9 +100,10 @@ Foam::sampledTriSurfaceMesh::sampledTriSurfaceMesh
false false
) )
), ),
sampleSource_(sampleSource),
needsUpdate_(true), needsUpdate_(true),
cellLabels_(0), sampleElements_(0),
pointToFace_(0) samplePoints_(0)
{} {}
@ -114,9 +128,10 @@ Foam::sampledTriSurfaceMesh::sampledTriSurfaceMesh
false false
) )
), ),
sampleSource_(samplingSourceNames_[dict.lookup("source")]),
needsUpdate_(true), needsUpdate_(true),
cellLabels_(0), sampleElements_(0),
pointToFace_(0) samplePoints_(0)
{} {}
@ -144,8 +159,8 @@ bool Foam::sampledTriSurfaceMesh::expire()
sampledSurface::clearGeom(); sampledSurface::clearGeom();
MeshStorage::clear(); MeshStorage::clear();
cellLabels_.clear(); sampleElements_.clear();
pointToFace_.clear(); samplePoints_.clear();
needsUpdate_ = true; needsUpdate_ = true;
return true; return true;
@ -164,43 +179,79 @@ bool Foam::sampledTriSurfaceMesh::update()
// Does approximation by looking at the face centres only // Does approximation by looking at the face centres only
const pointField& fc = surface_.faceCentres(); const pointField& fc = surface_.faceCentres();
// Mesh search engine, no triangulation of faces.
meshSearch meshSearcher(mesh(), false); meshSearch meshSearcher(mesh(), false);
const indexedOctree<treeDataCell>& cellTree = meshSearcher.cellTree();
// Global numbering for cells - only used to uniquely identify local cells.
globalIndex globalCells(mesh().nCells());
List<nearInfo> nearest(fc.size()); List<nearInfo> nearest(fc.size());
// Global numbering for cells/faces - only used to uniquely identify local
// elements
globalIndex globalCells
(
sampleSource_ == cells
? mesh().nCells()
: mesh().nFaces()
);
forAll(nearest, i) forAll(nearest, i)
{ {
nearest[i].first() = GREAT; nearest[i].first() = GREAT;
nearest[i].second() = labelMax; nearest[i].second() = labelMax;
} }
// Search triangles using nearest on local mesh if (sampleSource_ == cells)
forAll(fc, triI)
{ {
pointIndexHit nearInfo = cellTree.findNearest // Search for nearest cell
(
fc[triI], const indexedOctree<treeDataCell>& cellTree = meshSearcher.cellTree();
sqr(GREAT)
); forAll(fc, triI)
if (nearInfo.hit())
{ {
nearest[triI].first() = magSqr(nearInfo.hitPoint()-fc[triI]); pointIndexHit nearInfo = cellTree.findNearest
nearest[triI].second() = globalCells.toGlobal(nearInfo.index()); (
fc[triI],
sqr(GREAT)
);
if (nearInfo.hit())
{
nearest[triI].first() = magSqr(nearInfo.hitPoint()-fc[triI]);
nearest[triI].second() = globalCells.toGlobal(nearInfo.index());
}
}
}
else
{
// Search for nearest boundaryFace
const indexedOctree<treeDataFace>& bTree = meshSearcher.boundaryTree();
forAll(fc, triI)
{
pointIndexHit nearInfo = bTree.findNearest
(
fc[triI],
sqr(GREAT)
);
if (nearInfo.hit())
{
nearest[triI].first() = magSqr(nearInfo.hitPoint()-fc[triI]);
nearest[triI].second() = globalCells.toGlobal
(
bTree.shapes().faceLabels()[nearInfo.index()]
);
}
} }
} }
// See which processor has the nearest.
// See which processor has the nearest. Mark and subset
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Pstream::listCombineGather(nearest, nearestEqOp()); Pstream::listCombineGather(nearest, nearestEqOp());
Pstream::listCombineScatter(nearest); Pstream::listCombineScatter(nearest);
boolList include(surface_.size(), false); labelList cellOrFaceLabels(fc.size(), -1);
cellLabels_.setSize(fc.size());
cellLabels_ = -1;
label nFound = 0; label nFound = 0;
forAll(nearest, triI) forAll(nearest, triI)
@ -211,9 +262,10 @@ bool Foam::sampledTriSurfaceMesh::update()
} }
else if (globalCells.isLocal(nearest[triI].second())) else if (globalCells.isLocal(nearest[triI].second()))
{ {
cellLabels_[triI] = globalCells.toLocal(nearest[triI].second()); cellOrFaceLabels[triI] = globalCells.toLocal
(
include[triI] = true; nearest[triI].second()
);
nFound++; nFound++;
} }
} }
@ -221,7 +273,7 @@ bool Foam::sampledTriSurfaceMesh::update()
if (debug) if (debug)
{ {
Pout<< "Local out of faces:" << cellLabels_.size() Pout<< "Local out of faces:" << cellOrFaceLabels.size()
<< " keeping:" << nFound << endl; << " keeping:" << nFound << endl;
} }
@ -243,7 +295,7 @@ bool Foam::sampledTriSurfaceMesh::update()
forAll(s, faceI) forAll(s, faceI)
{ {
if (include[faceI]) if (cellOrFaceLabels[faceI] != -1)
{ {
faceMap[newFaceI++] = faceI; faceMap[newFaceI++] = faceI;
@ -262,11 +314,12 @@ bool Foam::sampledTriSurfaceMesh::update()
pointMap.setSize(newPointI); pointMap.setSize(newPointI);
} }
// Subset cellLabels
cellLabels_ = UIndirectList<label>(cellLabels_, faceMap)();
// Store any face per point // Subset cellOrFaceLabels
pointToFace_.setSize(pointMap.size()); cellOrFaceLabels = UIndirectList<label>(cellOrFaceLabels, faceMap)();
// Store any face per point (without using pointFaces())
labelList pointToFace(pointMap.size());
// Create faces and points for subsetted surface // Create faces and points for subsetted surface
faceList& faces = this->storedFaces(); faceList& faces = this->storedFaces();
@ -284,7 +337,7 @@ bool Foam::sampledTriSurfaceMesh::update()
forAll(newF, fp) forAll(newF, fp)
{ {
pointToFace_[newF[fp]] = i; pointToFace[newF[fp]] = i;
} }
} }
@ -296,6 +349,161 @@ bool Foam::sampledTriSurfaceMesh::update()
Pout<< endl; Pout<< endl;
} }
// Collect the samplePoints and sampleElements
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
if (sampledSurface::interpolate())
{
samplePoints_.setSize(pointMap.size());
sampleElements_.setSize(pointMap.size(), -1);
if (sampleSource_ == cells)
{
// samplePoints_ : per surface point a location inside the cell
// sampleElements_ : per surface point the cell
forAll(points(), pointI)
{
const point& pt = points()[pointI];
label cellI = cellOrFaceLabels[pointToFace[pointI]];
sampleElements_[pointI] = cellI;
// Check if point inside cell
if (mesh().pointInCell(pt, sampleElements_[pointI]))
{
samplePoints_[pointI] = pt;
}
else
{
// Find nearest point on faces of cell
const cell& cFaces = mesh().cells()[cellI];
scalar minDistSqr = VGREAT;
forAll(cFaces, i)
{
const face& f = mesh().faces()[cFaces[i]];
pointHit info = f.nearestPoint(pt, mesh().points());
if (info.distance() < minDistSqr)
{
minDistSqr = info.distance();
samplePoints_[pointI] = info.rawPoint();
}
}
}
}
}
else
{
// samplePoints_ : per surface point a location on the boundary
// sampleElements_ : per surface point the boundary face containing
// the location
forAll(points(), pointI)
{
const point& pt = points()[pointI];
label faceI = cellOrFaceLabels[pointToFace[pointI]];
sampleElements_[pointI] = faceI;
samplePoints_[pointI] = mesh().faces()[faceI].nearestPoint
(
pt,
mesh().points()
).rawPoint();
}
}
}
else
{
// if sampleSource_ == cells:
// samplePoints_ : n/a
// sampleElements_ : per surface triangle the cell
// else:
// samplePoints_ : n/a
// sampleElements_ : per surface triangle the boundary face
samplePoints_.clear();
sampleElements_.transfer(cellOrFaceLabels);
}
if (debug)
{
this->clearOut();
OFstream str(mesh().time().path()/"surfaceToMesh.obj");
Info<< "Dumping correspondence from local surface (points or faces)"
<< " to mesh (cells or faces) to " << str.name() << endl;
label vertI = 0;
if (sampledSurface::interpolate())
{
if (sampleSource_ == cells)
{
forAll(samplePoints_, pointI)
{
meshTools::writeOBJ(str, points()[pointI]);
vertI++;
meshTools::writeOBJ(str, samplePoints_[pointI]);
vertI++;
label cellI = sampleElements_[pointI];
meshTools::writeOBJ(str, mesh().cellCentres()[cellI]);
vertI++;
str << "l " << vertI-2 << ' ' << vertI-1 << ' ' << vertI
<< nl;
}
}
else
{
forAll(samplePoints_, pointI)
{
meshTools::writeOBJ(str, points()[pointI]);
vertI++;
meshTools::writeOBJ(str, samplePoints_[pointI]);
vertI++;
label faceI = sampleElements_[pointI];
meshTools::writeOBJ(str, mesh().faceCentres()[faceI]);
vertI++;
str << "l " << vertI-2 << ' ' << vertI-1 << ' ' << vertI
<< nl;
}
}
}
else
{
if (sampleSource_ == cells)
{
forAll(sampleElements_, triI)
{
meshTools::writeOBJ(str, faceCentres()[triI]);
vertI++;
label cellI = sampleElements_[triI];
meshTools::writeOBJ(str, mesh().cellCentres()[cellI]);
vertI++;
str << "l " << vertI-1 << ' ' << vertI << nl;
}
}
else
{
forAll(sampleElements_, triI)
{
meshTools::writeOBJ(str, faceCentres()[triI]);
vertI++;
label faceI = sampleElements_[triI];
meshTools::writeOBJ(str, mesh().faceCentres()[faceI]);
vertI++;
str << "l " << vertI-1 << ' ' << vertI << nl;
}
}
}
}
needsUpdate_ = false; needsUpdate_ = false;
return true; return true;
} }

29
src/sampling/sampledSurface/sampledTriSurfaceMesh/sampledTriSurfaceMesh.H
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2010-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -61,22 +61,38 @@ class sampledTriSurfaceMesh
public sampledSurface, public sampledSurface,
public MeshedSurface<face> public MeshedSurface<face>
{ {
public:
//- Types of communications
enum samplingSource
{
cells,
boundaryFaces
};
private:
//- Private typedefs for convenience //- Private typedefs for convenience
typedef MeshedSurface<face> MeshStorage; typedef MeshedSurface<face> MeshStorage;
// Private data // Private data
static const NamedEnum<samplingSource, 2> samplingSourceNames_;
//- Surface to sample on //- Surface to sample on
const triSurfaceMesh surface_; const triSurfaceMesh surface_;
//- Whether to sample internal cell values or boundary values
const samplingSource sampleSource_;
//- Track if the surface needs an update //- Track if the surface needs an update
mutable bool needsUpdate_; mutable bool needsUpdate_;
//- From local surface triangle to mesh cell. //- From local surface triangle to mesh cell/face.
labelList cellLabels_; labelList sampleElements_;
//- From local surface back to surface_ //- Local points to sample per point
labelList pointToFace_; pointField samplePoints_;
// Private Member Functions // Private Member Functions
@ -106,7 +122,8 @@ public:
( (
const word& name, const word& name,
const polyMesh& mesh, const polyMesh& mesh,
const word& surfaceName const word& surfaceName,
const samplingSource sampleSource
); );
//- Construct from dictionary //- Construct from dictionary

76
src/sampling/sampledSurface/sampledTriSurfaceMesh/sampledTriSurfaceMeshTemplates.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2010-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -35,12 +35,48 @@ Foam::sampledTriSurfaceMesh::sampleField
) const ) const
{ {
// One value per face // One value per face
tmp<Field<Type> > tvalues(new Field<Type>(cellLabels_.size())); tmp<Field<Type> > tvalues(new Field<Type>(sampleElements_.size()));
Field<Type>& values = tvalues(); Field<Type>& values = tvalues();
forAll(cellLabels_, triI) if (sampleSource_ == cells)
{ {
values[triI] = vField[cellLabels_[triI]]; // Sample cells
forAll(sampleElements_, triI)
{
values[triI] = vField[sampleElements_[triI]];
}
}
else
{
// Sample boundary faces
const polyBoundaryMesh& pbm = mesh().boundaryMesh();
label nBnd = mesh().nFaces()-mesh().nInternalFaces();
// Create flat boundary field
Field<Type> bVals(nBnd, pTraits<Type>::zero);
forAll(vField.boundaryField(), patchI)
{
label bFaceI = pbm[patchI].start() - mesh().nInternalFaces();
SubList<Type>
(
bVals,
vField.boundaryField()[patchI].size(),
bFaceI
).assign(vField.boundaryField()[patchI]);
}
// Sample in flat boundary field
forAll(sampleElements_, triI)
{
label faceI = sampleElements_[triI];
values[triI] = bVals[faceI-mesh().nInternalFaces()];
}
} }
return tvalues; return tvalues;
@ -55,15 +91,37 @@ Foam::sampledTriSurfaceMesh::interpolateField
) const ) const
{ {
// One value per vertex // One value per vertex
tmp<Field<Type> > tvalues(new Field<Type>(pointToFace_.size())); tmp<Field<Type> > tvalues(new Field<Type>(sampleElements_.size()));
Field<Type>& values = tvalues(); Field<Type>& values = tvalues();
forAll(pointToFace_, pointI) if (sampleSource_ == cells)
{ {
label triI = pointToFace_[pointI]; // Sample cells.
label cellI = cellLabels_[triI];
values[pointI] = interpolator.interpolate(points()[pointI], cellI); forAll(sampleElements_, pointI)
{
values[pointI] = interpolator.interpolate
(
samplePoints_[pointI],
sampleElements_[pointI]
);
}
}
else
{
// Sample boundary faces.
forAll(samplePoints_, pointI)
{
label faceI = sampleElements_[pointI];
values[pointI] = interpolator.interpolate
(
samplePoints_[pointI],
mesh().faceOwner()[faceI],
faceI
);
}
} }
return tvalues; return tvalues;

7
src/triSurface/triSurface/stitchTriangles.C
View File

@ -2,7 +2,7 @@
========= | ========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration | \\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd. \\ / A nd | Copyright (C) 2004-2011 OpenCFD Ltd.
\\/ M anipulation | \\/ M anipulation |
------------------------------------------------------------------------------- -------------------------------------------------------------------------------
License License
@ -151,6 +151,11 @@ bool Foam::triSurface::stitchTriangles
} }
} }
} }
else
{
// Can happen for e.g. single triangle or cloud of unconnected triangles
storedPoints() = rawPoints;
}
return hasMerged; return hasMerged;
} }

2
tutorials/lagrangian/reactingParcelFilmFoam/evaporationTest/Allrun.pre
View File

@ -11,5 +11,5 @@ mv log.setSet log.wallFilmRegion.setSet
runApplication setsToZones -noFlipMap runApplication setsToZones -noFlipMap
mv log.setsToZones log.setsToZones.primaryRegion mv log.setsToZones log.setsToZones.primaryRegion
runApplication extrudeToRegionMesh wallFilmRegion '(wallFilmFaces)' 0.01 -overwrite runApplication extrudeToRegionMesh -overwrite

64
tutorials/lagrangian/reactingParcelFilmFoam/evaporationTest/constant/reactingCloud1Properties
View File

@ -18,70 +18,6 @@ FoamFile
solution solution
{ {
active false; active false;
integrationSchemes
{
U Euler;
T Analytical;
}
}
constantProperties
{
parcelTypeId 1;
rhoMin 1e-15;
TMin 200;
pMin 1000;
minParticleMass 1e-15;
rho0 1000;
T0 300;
Cp0 4187;
epsilon0 1;
f0 0.5;
Pr 0.7;
Tvap 273;
Tbp 373;
youngsModulus 0;
poissonsRatio 0;
constantVolume false;
}
particleForces
{
gravity on;
virtualMass off;
pressureGradient off;
paramagnetic off;
}
subModels
{
InjectionModel none;
DragModel none;
DispersionModel none;
PatchInteractionModel none;
CollisionModel none;
HeatTransferModel none;
CompositionModel none;
PhaseChangeModel none;
PostProcessingModel none;
SurfaceFilmModel none;
radiation off;
} }

38
tutorials/lagrangian/reactingParcelFilmFoam/evaporationTest/system/extrudeToRegionMeshDict Normal file
View File

@ -0,0 +1,38 @@
/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: dev |
| \\ / A nd | Web: www.OpenFOAM.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object extrudeToRegionMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
region wallFilmRegion;
faceZones (wallFilmFaces);
adaptMesh true;
oneD false;
extrudeModel linearNormal;
nLayers 1;
expansionRatio 1;
linearNormalCoeffs
{
thickness 0.01;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

2
tutorials/lagrangian/reactingParcelFilmFoam/panel/Allrun.pre
View File

@ -6,7 +6,7 @@ runApplication blockMesh
runApplication setSet -batch wallFilmRegion.setSet runApplication setSet -batch wallFilmRegion.setSet
mv log.setSet log.wallFilmRegion.setSet mv log.setSet log.wallFilmRegion.setSet
runApplication extrudeToRegionMesh wallFilmRegion '(wallFilmFaces)' 0.01 -overwrite runApplication extrudeToRegionMesh -overwrite
runApplication setSet -region wallFilmRegion -batch createWallFilmRegionPatches.setSet runApplication setSet -region wallFilmRegion -batch createWallFilmRegionPatches.setSet
mv log.setSet log.createWallFilmRegionPatches.setSet mv log.setSet log.createWallFilmRegionPatches.setSet

66
tutorials/lagrangian/reactingParcelFilmFoam/panel/constant/reactingCloud1Properties
View File

@ -2,7 +2,7 @@
| ========= | | | ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox | | \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: dev | | \\ / O peration | Version: dev |
| \\ / A nd | Web: www.OpenFOAM.com | | \\ / A nd | Web: www.OpenFOAM.org |
| \\/ M anipulation | | | \\/ M anipulation | |
\*---------------------------------------------------------------------------*/ \*---------------------------------------------------------------------------*/
FoamFile FoamFile
@ -18,70 +18,6 @@ FoamFile
solution solution
{ {
active false; active false;
integrationSchemes
{
U Euler;
T Analytical;
}
}
constantProperties
{
parcelTypeId 1;
rhoMin 1e-15;
TMin 200;
pMin 1000;
minParticleMass 1e-15;
rho0 1000;
T0 300;
Cp0 4187;
youngsModulus 1e9;
poissonsRatio 0.35;
epsilon0 1;
f0 0.5;
Pr 0.7;
Tvap 273;
Tbp 373;
constantVolume false;
}
particleForces
{
gravity on;
virtualMass off;
pressureGradient off;
paramagnetic off;
}
subModels
{
InjectionModel none;
DragModel none;
DispersionModel none;
PatchInteractionModel none;
HeatTransferModel none;
CompositionModel none;
PhaseChangeModel none;
PostProcessingModel none;
CollisionModel none;
SurfaceFilmModel none;
radiation off;
} }

38
tutorials/lagrangian/reactingParcelFilmFoam/panel/system/extrudeToRegionMeshDict Normal file
View File

@ -0,0 +1,38 @@
/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: dev |
| \\ / A nd | Web: www.OpenFOAM.com |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object extrudeToRegionMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
region wallFilmRegion;
faceZones (wallFilmFaces);
adaptMesh true;
oneD false;
extrudeModel linearNormal;
nLayers 1;
expansionRatio 1;
linearNormalCoeffs
{
thickness 0.01;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //