Merge remote-tracking branch 'origin/master' into feature/procAgglom

Conflicts:
	src/OpenFOAM/db/IOstreams/Pstreams/Pstream.H
	src/OpenFOAM/db/IOstreams/Pstreams/UPstream.C
	src/OpenFOAM/db/IOstreams/Pstreams/UPstream.H
	src/OpenFOAM/db/IOstreams/Pstreams/combineGatherScatter.C
	src/OpenFOAM/db/IOstreams/Pstreams/gatherScatter.C
	src/OpenFOAM/db/IOstreams/Pstreams/gatherScatterList.C
	src/OpenFOAM/matrices/lduMatrix/solvers/GAMG/interfaceFields/processorGAMGInterfaceField/processorGAMGInterfaceField.C
	src/OpenFOAM/matrices/lduMatrix/solvers/GAMG/interfaceFields/processorGAMGInterfaceField/processorGAMGInterfaceField.H
	src/OpenFOAM/matrices/lduMatrix/solvers/GAMG/interfaces/GAMGInterface/GAMGInterface.H
	src/finiteVolume/fvMesh/fvMesh.H
This commit is contained in:
mattijs
2013-04-23 09:41:15 +01:00
1468 changed files with 43779 additions and 20227 deletions

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@ -4,7 +4,6 @@ simpleGeomDecomp/simpleGeomDecomp.C
hierarchGeomDecomp/hierarchGeomDecomp.C
manualDecomp/manualDecomp.C
multiLevelDecomp/multiLevelDecomp.C
structuredDecomp/topoDistanceData.C
structuredDecomp/structuredDecomp.C
noDecomp/noDecomp.C

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@ -1,50 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "topoDistanceData.H"
// * * * * * * * * * * * * * * * Friend Operators * * * * * * * * * * * * * //
Foam::Ostream& Foam::operator<<
(
Foam::Ostream& os,
const Foam::topoDistanceData& wDist
)
{
return os << wDist.data_ << token::SPACE << wDist.distance_;
}
Foam::Istream& Foam::operator>>
(
Foam::Istream& is,
Foam::topoDistanceData& wDist
)
{
return is >> wDist.data_ >> wDist.distance_;
}
// ************************************************************************* //

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@ -1,218 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::topoDistanceData
Description
For use with FaceCellWave. Determines topological distance to starting faces
SourceFiles
topoDistanceDataI.H
topoDistanceData.C
\*---------------------------------------------------------------------------*/
#ifndef topoDistanceData_H
#define topoDistanceData_H
#include "point.H"
#include "tensor.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
class polyPatch;
class polyMesh;
/*---------------------------------------------------------------------------*\
Class topoDistanceData Declaration
\*---------------------------------------------------------------------------*/
class topoDistanceData
{
// Private data
//- Starting data
label data_;
//- Distance
label distance_;
public:
// Constructors
//- Construct null
inline topoDistanceData();
//- Construct from count
inline topoDistanceData
(
const label data,
const label distance
);
// Member Functions
// Access
inline label data() const
{
return data_;
}
inline label distance() const
{
return distance_;
}
// Needed by FaceCellWave
//- Check whether origin has been changed at all or
// still contains original (invalid) value.
template<class TrackingData>
inline bool valid(TrackingData& td) const;
//- Check for identical geometrical data. Used for cyclics checking.
template<class TrackingData>
inline bool sameGeometry
(
const polyMesh&,
const topoDistanceData&,
const scalar,
TrackingData& td
) const;
//- Convert any absolute coordinates into relative to (patch)face
// centre
template<class TrackingData>
inline void leaveDomain
(
const polyMesh&,
const polyPatch&,
const label patchFaceI,
const point& faceCentre,
TrackingData& td
);
//- Reverse of leaveDomain
template<class TrackingData>
inline void enterDomain
(
const polyMesh&,
const polyPatch&,
const label patchFaceI,
const point& faceCentre,
TrackingData& td
);
//- Apply rotation matrix to any coordinates
template<class TrackingData>
inline void transform
(
const polyMesh&,
const tensor&,
TrackingData& td
);
//- Influence of neighbouring face.
template<class TrackingData>
inline bool updateCell
(
const polyMesh&,
const label thisCellI,
const label neighbourFaceI,
const topoDistanceData& neighbourInfo,
const scalar tol,
TrackingData& td
);
//- Influence of neighbouring cell.
template<class TrackingData>
inline bool updateFace
(
const polyMesh&,
const label thisFaceI,
const label neighbourCellI,
const topoDistanceData& neighbourInfo,
const scalar tol,
TrackingData& td
);
//- Influence of different value on same face.
template<class TrackingData>
inline bool updateFace
(
const polyMesh&,
const label thisFaceI,
const topoDistanceData& neighbourInfo,
const scalar tol,
TrackingData& td
);
//- Same (like operator==)
template<class TrackingData>
inline bool equal(const topoDistanceData&, TrackingData& td) const;
// Member Operators
// Needed for List IO
inline bool operator==(const topoDistanceData&) const;
inline bool operator!=(const topoDistanceData&) const;
// IOstream Operators
friend Ostream& operator<<(Ostream&, const topoDistanceData&);
friend Istream& operator>>(Istream&, topoDistanceData&);
};
//- Data associated with topoDistanceData type are contiguous
template<>
inline bool contiguous<topoDistanceData>()
{
return true;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#include "topoDistanceDataI.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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@ -1,219 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "polyMesh.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
// Null constructor
inline Foam::topoDistanceData::topoDistanceData()
:
data_(-1),
distance_(-1)
{}
// Construct from components
inline Foam::topoDistanceData::topoDistanceData
(
const label data,
const label distance
)
:
data_(data),
distance_(distance)
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
template <class TrackingData>
inline bool Foam::topoDistanceData::valid(TrackingData& td) const
{
return distance_ != -1;
}
// No geometric data so never any problem on cyclics
template <class TrackingData>
inline bool Foam::topoDistanceData::sameGeometry
(
const polyMesh&,
const topoDistanceData&,
const scalar,
TrackingData&
) const
{
return true;
}
// No geometric data.
template <class TrackingData>
inline void Foam::topoDistanceData::leaveDomain
(
const polyMesh&,
const polyPatch& patch,
const label patchFaceI,
const point& faceCentre,
TrackingData&
)
{}
// No geometric data.
template <class TrackingData>
inline void Foam::topoDistanceData::transform
(
const polyMesh&,
const tensor& rotTensor,
TrackingData&
)
{}
// No geometric data.
template <class TrackingData>
inline void Foam::topoDistanceData::enterDomain
(
const polyMesh&,
const polyPatch& patch,
const label patchFaceI,
const point& faceCentre,
TrackingData&
)
{}
// Update cell with neighbouring face information
template <class TrackingData>
inline bool Foam::topoDistanceData::updateCell
(
const polyMesh&,
const label thisCellI,
const label neighbourFaceI,
const topoDistanceData& neighbourInfo,
const scalar tol,
TrackingData&
)
{
if (distance_ == -1)
{
operator=(neighbourInfo);
return true;
}
else
{
return false;
}
}
// Update face with neighbouring cell information
template <class TrackingData>
inline bool Foam::topoDistanceData::updateFace
(
const polyMesh& mesh,
const label thisFaceI,
const label neighbourCellI,
const topoDistanceData& neighbourInfo,
const scalar tol,
TrackingData&
)
{
// From cell to its faces.
if (distance_ == -1)
{
data_ = neighbourInfo.data_;
distance_ = neighbourInfo.distance_ + 1;
return true;
}
else
{
return false;
}
}
// Update face with coupled face information
template <class TrackingData>
inline bool Foam::topoDistanceData::updateFace
(
const polyMesh&,
const label thisFaceI,
const topoDistanceData& neighbourInfo,
const scalar tol,
TrackingData&
)
{
// From face to face (e.g. coupled faces)
if (distance_ == -1)
{
operator=(neighbourInfo);
return true;
}
else
{
return false;
}
}
template <class TrackingData>
inline bool Foam::topoDistanceData::equal
(
const topoDistanceData& rhs,
TrackingData& td
) const
{
return operator==(rhs);
}
// * * * * * * * * * * * * * * * Member Operators * * * * * * * * * * * * * //
inline bool Foam::topoDistanceData::operator==
(
const Foam::topoDistanceData& rhs
) const
{
return data() == rhs.data() && distance() == rhs.distance();
}
inline bool Foam::topoDistanceData::operator!=
(
const Foam::topoDistanceData& rhs
) const
{
return !(*this == rhs);
}
// ************************************************************************* //

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@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -485,6 +485,40 @@ Foam::label Foam::scotchDecomp::decomposeOneProc
SCOTCH_archCmplt(&archdat, nProcessors_),
"SCOTCH_archCmplt"
);
//- Hack to test clustering. Note that finalDecomp is non-compact
// numbers!
//
////- Set up variable sizes architecture
//check
//(
// SCOTCH_archVcmplt(&archdat),
// "SCOTCH_archVcmplt"
//);
//
////- stategy flags: go for quality or load balance (or leave default)
//SCOTCH_Num straval = 0;
////straval |= SCOTCH_STRATQUALITY;
////straval |= SCOTCH_STRATQUALITY;
//
////- Number of cells per agglomeration
////SCOTCH_Num agglomSize = SCOTCH_archSize(&archdat);
//SCOTCH_Num agglomSize = 3;
//
////- Build strategy for agglomeration
//check
//(
// SCOTCH_stratGraphClusterBuild
// (
// &stradat, // strategy to build
// straval, // strategy flags
// agglomSize, // cells per cluster
// 1.0, // weight?
// 0.01 // max load imbalance
// ),
// "SCOTCH_stratGraphClusterBuild"
//);
}

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@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -88,22 +88,20 @@ void Foam::distributedTriSurfaceMesh::distributeFields
{
typedef DimensionedField<Type, triSurfaceGeoMesh> DimensionedSurfField;
HashTable<const DimensionedSurfField*> fields
HashTable<DimensionedSurfField*> fields
(
objectRegistry::lookupClass
<DimensionedSurfField >()
objectRegistry::lookupClass<DimensionedSurfField>()
);
for
(
typename HashTable<const DimensionedSurfField*>::iterator fieldIter =
typename HashTable<DimensionedSurfField*>::iterator fieldIter =
fields.begin();
fieldIter != fields.end();
++fieldIter
)
{
DimensionedSurfField& field =
const_cast<DimensionedSurfField&>(*fieldIter());
DimensionedSurfField& field = *fieldIter();
label oldSize = field.size();