COMP: add in plain lib/ directories for boost, cgal, fftw

- these directories are sometimes used for a central, non-thirdparty, non-system
  installation

- leave gmp and mpfr as is, since it is not clear how these would interact with system
  versions

applications/utilities/surface/surfaceBooleanFeatures/PolyhedronReader/Make/options

@@ -20,5 +20,6 @@ EXE_INC = \
     -I/usr/include/Qt
 
 LIB_LIBS = \
+    -L$(CGAL_ARCH_PATH)/lib \
     -L$(CGAL_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
     -ltriSurface

src/randomProcesses/Make/options

@@ -5,6 +5,8 @@ EXE_INC = \
     -I$(LIB_SRC)/surfMesh/lnInclude
 
 LIB_LIBS = \
-    -L$(FFTW_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) -lfftw3 \
+    -L$(FFTW_ARCH_PATH)/lib \
+    -L$(FFTW_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
+    -lfftw3 \
     -lfiniteVolume \
     -lsampling

src/renumber/SloanRenumber/Make/options

@@ -5,7 +5,9 @@ EXE_INC = \
     -I$(LIB_SRC)/renumber/renumberMethods/lnInclude
 
 LIB_LIBS = \
-    -L$(BOOST_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) -lboost_system \
+    -L$(BOOST_ARCH_PATH)/lib \
+    -L$(BOOST_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
+    -lboost_system \
     -lmeshTools \
     -ldecompositionMethods \
     -lrenumberMethods

wmake/rules/General/CGAL

@@ -1,13 +1,15 @@
 CGAL_INC = \
-    -I$(CGAL_ARCH_PATH)/include \
-    -I$(MPFR_ARCH_PATH)/include \
     -I$(GMP_ARCH_PATH)/include \
+    -I$(MPFR_ARCH_PATH)/include \
     -I$(BOOST_ARCH_PATH)/include \
+    -I$(CGAL_ARCH_PATH)/include \
     -I/usr/include
 
 CGAL_LIBS = \
-    -L$(MPFR_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
     -L$(GMP_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
+    -L$(MPFR_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
+    -L$(BOOST_ARCH_PATH)/lib \
     -L$(BOOST_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
+    -L$(CGAL_ARCH_PATH)/lib \
     -L$(CGAL_ARCH_PATH)/lib$(WM_COMPILER_LIB_ARCH) \
     -lCGAL