Merge branch 'master' of ssh://noisy/home/noisy3/OpenFOAM/OpenFOAM-dev

applications/solvers/dsmc/dsmcFoam/Make/files

@@ -0,0 +1,3 @@
+dsmcFoam.C
+
+EXE = $(FOAM_APPBIN)/dsmcFoam

applications/solvers/dsmc/dsmcFoam/Make/options

@@ -0,0 +1,12 @@
+EXE_INC = \
+    -I$(LIB_SRC)/finiteVolume/lnInclude \
+    -I$(LIB_SRC)/lagrangian/basic/lnInclude \
+    -I$(LIB_SRC)/lagrangian/dsmc/lnInclude \
+    -I$(LIB_SRC)/meshTools/lnInclude
+
+EXE_LIBS = \
+    -lmeshTools \
+    -lfiniteVolume \
+    -llagrangian \
+    -ldsmc
+

applications/solvers/dsmc/dsmcFoam/createFields.H

@@ -0,0 +1,162 @@
+
+    Info<< nl << "Reading field boundaryT" << endl;
+    volScalarField boundaryT
+    (
+        IOobject
+        (
+            "boundaryT",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field boundaryU" << endl;
+    volVectorField boundaryU
+    (
+        IOobject
+        (
+            "boundaryU",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field rhoN (number density)" << endl;
+    volScalarField rhoN
+    (
+        IOobject
+        (
+            "rhoN",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field rhoM (mass density)" << endl;
+    volScalarField rhoM
+    (
+        IOobject
+        (
+            "rhoM",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field rhoNdsmc (dsmc particle density)" << endl;
+    volScalarField dsmcRhoN
+    (
+        IOobject
+        (
+            "dsmcRhoN",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field momentum (momentum density)" << endl;
+    volVectorField momentum
+    (
+        IOobject
+        (
+            "momentum",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field linearKE (linear kinetic energy density)"
+        << endl;
+
+    volScalarField linearKE
+    (
+        IOobject
+        (
+            "linearKE",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field internalE (internal energy density)" << endl;
+    volScalarField internalE
+    (
+        IOobject
+        (
+            "internalE",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field iDof (internal degree of freedom density)"
+        << endl;
+
+    volScalarField iDof
+    (
+        IOobject
+        (
+            "iDof",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field q (surface heat transfer)" << endl;
+    volScalarField q
+    (
+        IOobject
+        (
+            "q",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Reading field fD (surface force density)" << endl;
+    volVectorField fD
+    (
+        IOobject
+        (
+            "fD",
+            runTime.timeName(),
+            mesh,
+            IOobject::MUST_READ,
+            IOobject::AUTO_WRITE
+        ),
+        mesh
+    );
+
+    Info<< nl << "Constructing dsmcCloud " << endl;
+
+    dsmcCloud dsmc("dsmc", boundaryT, boundaryU);

applications/solvers/dsmc/dsmcFoam/dsmcFoam.C

@@ -0,0 +1,105 @@
+/*---------------------------------------------------------------------------*\
+  =========                 |
+  \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
+   \\    /   O peration     |
+    \\  /    A nd           | Copyright (C) 1991-2009 OpenCFD Ltd.
+     \\/     M anipulation  |
+-------------------------------------------------------------------------------
+License
+    This file is part of OpenFOAM.
+
+    OpenFOAM is free software; you can redistribute it and/or modify it
+    under the terms of the GNU General Public License as published by the
+    Free Software Foundation; either version 2 of the License, or (at your
+    option) any later version.
+
+    OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
+    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+    FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
+    for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with OpenFOAM; if not, write to the Free Software Foundation,
+    Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+
+Application
+    dsmcFoam
+
+Description
+    Direct Simulation Monte Carlo Solver for 3D, transient, multi-species flows
+
+\*---------------------------------------------------------------------------*/
+
+#include "fvCFD.H"
+#include "dsmcCloud.H"
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+int main(int argc, char *argv[])
+{
+    #include "setRootCase.H"
+    #include "createTime.H"
+    #include "createMesh.H"
+    #include "createFields.H"
+
+    // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+    Info<< "\nStarting time loop\n" << endl;
+
+    while (runTime.run())
+    {
+        runTime++;
+
+        Info<< "Time = " << runTime.timeName() << nl << endl;
+
+        // Carry out dsmcCloud timestep
+
+        dsmc.evolve();
+
+        // Retrieve flow field data from dsmcCloud
+
+        rhoN = dsmc.rhoN();
+        rhoN.correctBoundaryConditions();
+
+        rhoM = dsmc.rhoM();
+        rhoM.correctBoundaryConditions();
+
+        dsmcRhoN = dsmc.dsmcRhoN();
+        dsmcRhoN.correctBoundaryConditions();
+
+        momentum = dsmc.momentum();
+        momentum.correctBoundaryConditions();
+
+        linearKE = dsmc.linearKE();
+        linearKE.correctBoundaryConditions();
+
+        internalE = dsmc.internalE();
+        internalE.correctBoundaryConditions();
+
+        iDof = dsmc.iDof();
+        iDof.correctBoundaryConditions();
+
+        // Retrieve surface field data from dsmcCloud
+
+        q = dsmc.q();
+
+        fD = dsmc.fD();
+
+        // Print status of dsmcCloud
+
+        dsmc.info();
+
+        runTime.write();
+
+        Info<< "ExecutionTime = " << runTime.elapsedCpuTime() << " s"
+            << "  ClockTime = " << runTime.elapsedClockTime() << " s"
+            << nl << endl;
+    }
+
+    Info<< "End\n" << endl;
+
+    return(0);
+}
+
+
+// ************************************************************************* //

applications/test/List/ListTest.C

@@ -46,7 +46,7 @@ int main(int argc, char *argv[])
     List<vector> list(IStringStream("1 ((0 1 2))")());
     Info<< list << endl;
 
-    List<vector> list2(IStringStream("((0 1 2) (3 4 5) (3 4 5))")());
+    List<vector> list2(IStringStream("((0 1 2) (3 4 5) (6 7 8))")());
     Info<< list2 << endl;
 
     Info<< findIndex(list2, vector(3, 4, 5)) << endl;
@@ -59,6 +59,13 @@ int main(int argc, char *argv[])
     Info<< list2 << nl
         << list3 << endl;
 
+
+    // Subset
+    const labelList map(IStringStream("2 (0 2)")());
+    List<vector> subList3(list3, map);
+    Info<< "Elements " << map << " out of " << list3
+        << " : " << subList3 << endl;
+
     return 0;
 }
 

applications/test/UIndirectListTest/Make/files

@@ -0,0 +1,3 @@
+UIndirectListTest.C
+
+EXE = $(FOAM_USER_APPBIN)/UIndirectListTest

applications/test/UIndirectListTest/UIndirectListTest.C

@@ -22,79 +22,73 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
-Class
-    Foam::IndirectList
-
 Description
 
-SourceFiles
-    IndirectListI.H
-
 \*---------------------------------------------------------------------------*/
 
-#ifndef IndirectList_H
-#define IndirectList_H
+#include "UIndirectList.H"
+#include "IOstreams.H"
 
-#include "List.H"
+using namespace Foam;
 
 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+// Main program:
 
-namespace Foam
+int main(int argc, char *argv[])
 {
+    List<double> completeList(10);
 
-/*---------------------------------------------------------------------------*\
-                           Class IndirectList Declaration
-\*---------------------------------------------------------------------------*/
+    forAll(completeList, i)
+    {
+        completeList[i] = 0.1*i;
+    }
 
-template<class T>
-class IndirectList
-{
-    // Private data
+    List<label> addresses(5);
+    addresses[0] = 1;
+    addresses[1] = 0;
+    addresses[2] = 7;
+    addresses[3] = 8;
+    addresses[4] = 5;
 
-        const UList<T>& completeList_;
-        List<label> addresses_;
+    UIndirectList<double> idl(completeList, addresses);
+
+    forAll(idl, i)
+    {
+        Info<< idl[i] << token::SPACE;
+    }
+
+    Info<< endl;
+
+    idl[1] = -666;
+
+    Info<< "idl[1] changed:" << idl() << endl;
+
+    idl = -999;
+
+    Info<< "idl changed:" << idl() << endl;
+
+    UIndirectList<double> idl2(idl);
+
+    Info<< "idl2:" << idl2() << endl;
+
+    idl = idl2();
+
+    Info<< "idl assigned from UList:" << idl() << endl;
 
 
-    // Private Member Functions
+    List<double> realList = UIndirectList<double>(completeList, addresses);
 
-        //- Disallow default bitwise assignment
-        void operator=(const IndirectList<T>&);
+    Info<< "realList:" << realList << endl;
+
+    List<double> realList2(UIndirectList<double>(completeList, addresses));
+
+    Info<< "realList2:" << realList2 << endl;
 
 
-public:
+    Info << "\nEnd\n" << endl;
 
-    // Constructors
+    return 0;
+}
 
-        //- Construct given the complete list and the addressing array
-        inline IndirectList(const UList<T>&, const List<label>&);
-
-
-    // Member Functions
-
-        // Access
-
-            inline label size() const;
-            inline const UList<T>& completeList() const;
-            inline const List<label>& addresses() const;
-
-
-        // Member Operators
-
-            //- Return const access to an element
-            inline const T& operator[](const label) const;
-};
-
-
-// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
-
-} // End namespace Foam
-
-// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
-
-#include "IndirectListI.H"
-
-// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
-
-#endif
 
 // ************************************************************************* //

applications/utilities/mesh/advanced/combinePatchFaces/combinePatchFaces.C

@@ -177,7 +177,7 @@ label mergePatchFaces
         List<faceList> allFaceSetsFaces(allFaceSets.size());
         forAll(allFaceSets, setI)
         {
-            allFaceSetsFaces[setI] = IndirectList<face>
+            allFaceSetsFaces[setI] = UIndirectList<face>
             (
                 mesh.faces(),
                 allFaceSets[setI]

applications/utilities/mesh/conversion/polyDualMesh/meshDualiser.C

@@ -76,7 +76,7 @@ void Foam::meshDualiser::checkPolyTopoChange(const polyTopoChange& meshMod)
                     "meshDualiser::checkPolyTopoChange(const polyTopoChange&)"
                 )   << "duplicate verts:" << newToOld[newI]
                     << " coords:"
-                    << IndirectList<point>(points, newToOld[newI])()
+                    << UIndirectList<point>(points, newToOld[newI])()
                     << abort(FatalError);
             }
         }
@@ -226,10 +226,7 @@ Foam::label Foam::meshDualiser::addInternalFace
 
     if (debug)
     {
-        pointField facePoints
-        (
-            IndirectList<point>(meshMod.points(), newFace)()
-        );
+        pointField facePoints(meshMod.points(), newFace);
 
         labelList oldToNew;
         pointField newPoints;
@@ -289,7 +286,7 @@ Foam::label Foam::meshDualiser::addInternalFace
         //n /= mag(n);
         //Pout<< "Generated internal dualFace:" << dualFaceI
         //    << " verts:" << newFace
-        //    << " points:" << IndirectList<point>(meshMod.points(), newFace)()
+        //    << " points:" << UIndirectList<point>(meshMod.points(), newFace)()
         //    << " n:" << n
         //    << " between dualowner:" << dualCell0
         //    << " dualneigbour:" << dualCell1
@@ -316,7 +313,7 @@ Foam::label Foam::meshDualiser::addInternalFace
         //n /= mag(n);
         //Pout<< "Generated internal dualFace:" << dualFaceI
         //    << " verts:" << newFace
-        //    << " points:" << IndirectList<point>(meshMod.points(), newFace)()
+        //    << " points:" << UIndirectList<point>(meshMod.points(), newFace)()
         //    << " n:" << n
         //    << " between dualowner:" << dualCell1
         //    << " dualneigbour:" << dualCell0
@@ -373,7 +370,7 @@ Foam::label Foam::meshDualiser::addBoundaryFace
     //n /= mag(n);
     //Pout<< "Generated boundary dualFace:" << dualFaceI
     //    << " verts:" << newFace
-    //    << " points:" << IndirectList<point>(meshMod.points(), newFace)()
+    //    << " points:" << UIndirectList<point>(meshMod.points(), newFace)()
     //    << " n:" << n
     //    << " on dualowner:" << dualCellI
     //    << endl;
@@ -568,7 +565,7 @@ void Foam::meshDualiser::createFaceFromInternalFace
 
     //Pout<< "createFaceFromInternalFace : At face:" << faceI
     //    << " verts:" << f
-    //    << " points:" << IndirectList<point>(mesh_.points(), f)()
+    //    << " points:" << UIndirectList<point>(mesh_.points(), f)()
     //    << " started walking at edge:" << fEdges[fp]
     //    << " verts:" << mesh_.edges()[fEdges[fp]]
     //    << endl;
@@ -617,7 +614,7 @@ void Foam::meshDualiser::createFaceFromInternalFace
             {
                 FatalErrorIn("createFacesFromInternalFace(..)")
                     << "face:" << faceI << " verts:" << f
-                    << " points:" << IndirectList<point>(mesh_.points(), f)()
+                    << " points:" << UIndirectList<point>(mesh_.points(), f)()
                     << " no feature edge between " << f[fp]
                     << " and " << f[nextFp] << " although have different"
                     << " dual cells." << endl

applications/utilities/mesh/manipulation/setSet/writePointSet.C

@@ -70,7 +70,7 @@ void writePointSet
 
     labelList pointLabels(set.toc());
 
-    pointField setPoints(IndirectList<point>(mesh.points(), pointLabels)());
+    pointField setPoints(mesh.points(), pointLabels);
 
     // Write points
 

applications/utilities/mesh/manipulation/splitMesh/regionSide.C

@@ -22,14 +22,11 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
-Description
-
 \*---------------------------------------------------------------------------*/
 
 #include "regionSide.H"
 #include "meshTools.H"
 #include "primitiveMesh.H"
-#include "IndirectList.H"
 
 
 // * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
@@ -113,7 +110,7 @@ Foam::label Foam::regionSide::otherEdge
     )   << "Cannot find other edge on face " << faceI << " that uses point "
         << pointI << " but not point " << freePointI << endl
         << "Edges on face:" << fEdges
-        << " verts:" << IndirectList<edge>(mesh.edges(), fEdges)()
+        << " verts:" << UIndirectList<edge>(mesh.edges(), fEdges)()
         << " Vertices on face:"
         << mesh.faces()[faceI]
         << " Vertices on original edge:" << e << abort(FatalError);

applications/utilities/mesh/manipulation/splitMesh/splitMesh.C

@@ -50,15 +50,12 @@ Description
 #include "attachDetach.H"
 #include "attachPolyTopoChanger.H"
 #include "regionSide.H"
+#include "primitiveFacePatch.H"
 
 using namespace Foam;
 
 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
 
-// Calculation engine for set of faces in a mesh
-typedef PrimitivePatch<face, List, const pointField&> facePatch;
-
-
 // Find edge between points v0 and v1.
 label findEdge(const primitiveMesh& mesh, const label v0, const label v1)
 {
@@ -163,10 +160,16 @@ int main(int argc, char *argv[])
     // set of edges on side of this region. Use PrimitivePatch to find these.
     //
 
-    IndirectList<face> zoneFaces(mesh.faces(), faces);
-
     // Addressing on faces only in mesh vertices.
-    facePatch fPatch(zoneFaces(), mesh.points());
+    primitiveFacePatch fPatch
+    (
+        UIndirectList<face>
+        (
+            mesh.faces(),
+            faces
+        ),
+        mesh.points()
+    );
 
     const labelList& meshPoints = fPatch.meshPoints();
 

applications/utilities/mesh/manipulation/stitchMesh/stitchMesh.C

@@ -60,7 +60,6 @@ Description
 #include "polyTopoChanger.H"
 #include "mapPolyMesh.H"
 #include "ListOps.H"
-#include "IndirectList.H"
 #include "slidingInterface.H"
 #include "perfectInterface.H"
 #include "IOobjectList.H"

applications/utilities/postProcessing/dataConversion/foamToVTK/writePointSet.C

@@ -22,8 +22,6 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
-Description
-
 \*---------------------------------------------------------------------------*/
 
 #include "writePointSet.H"
@@ -76,7 +74,7 @@ void writePointSet
 
     writeFuns::insert
     (
-        IndirectList<point>(vMesh.mesh().points(), set.toc())(),
+        UIndirectList<point>(vMesh.mesh().points(), set.toc())(),
         ptField
     );
 

applications/utilities/postProcessing/miscellaneous/dsmcFieldsCalc/Make/files

@@ -0,0 +1,3 @@
+dsmcFieldsCalc.C
+
+EXE = $(FOAM_APPBIN)/dsmcFieldsCalc

applications/utilities/postProcessing/miscellaneous/dsmcFieldsCalc/Make/options

@@ -0,0 +1,16 @@
+EXE_INC = \
+    -I$(LIB_SRC)/postProcessing/postCalc \
+    -I$(LIB_SRC)/finiteVolume/lnInclude \
+    -I$(LIB_SRC)/lagrangian/basic/lnInclude \
+    -I$(LIB_SRC)/postProcessing/functionObjects/utilities/lnInclude \
+    -I$(LIB_SRC)/lagrangian/dsmc/lnInclude \
+    -I$(LIB_SRC)/meshTools/lnInclude
+
+EXE_LIBS = \
+    $(FOAM_LIBBIN)/postCalc.o \
+    -lmeshTools \
+    -lfiniteVolume \
+    -lutilityFunctionObjects \
+    -llagrangian \
+    -ldsmc
+

applications/utilities/postProcessing/miscellaneous/dsmcFieldsCalc/dsmcFieldsCalc.C

@@ -0,0 +1,147 @@
+/*---------------------------------------------------------------------------*\
+  =========                 |
+  \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
+   \\    /   O peration     |
+    \\  /    A nd           | Copyright (C) 1991-2009 OpenCFD Ltd.
+     \\/     M anipulation  |
+-------------------------------------------------------------------------------
+License
+    This file is part of OpenFOAM.
+
+    OpenFOAM is free software; you can redistribute it and/or modify it
+    under the terms of the GNU General Public License as published by the
+    Free Software Foundation; either version 2 of the License, or (at your
+    option) any later version.
+
+    OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
+    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+    FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
+    for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with OpenFOAM; if not, write to the Free Software Foundation,
+    Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+
+Application
+    dsmcFields
+
+Description
+    Calculate intensive fields (U and T) from averaged extensive fields from a
+    DSMC calculation.
+
+\*---------------------------------------------------------------------------*/
+
+#include "calc.H"
+#include "fvc.H"
+#include "dsmcCloud.H"
+#include "dsmcFields.H"
+#include "IOobjectList.H"
+
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+namespace Foam
+{
+    template<class Type>
+    bool addFieldsToList
+    (
+        const fvMesh& mesh,
+        PtrList<GeometricField<Type, fvPatchField, volMesh> >& list,
+        const wordList& fieldNames
+    )
+    {
+        typedef GeometricField<Type, fvPatchField, volMesh> fieldType;
+
+        label index = 0;
+        forAll(fieldNames, i)
+        {
+            IOobject obj
+            (
+                fieldNames[i],
+                mesh.time().timeName(),
+                mesh,
+                IOobject::MUST_READ
+            );
+
+            if (obj.headerOk() && obj.headerClassName() == fieldType::typeName)
+            {
+                list.set(index++, new fieldType(obj, mesh));
+            }
+            else
+            {
+                Info<< "Could not find " << fieldNames[i] << endl;
+
+                return false;
+            }
+        }
+
+        return true;
+    }
+}
+
+
+void Foam::calc(const argList& args, const Time& runTime, const fvMesh& mesh)
+{
+    bool writeResults = !args.options().found("noWrite");
+
+    wordList extensiveVSFNames
+    (
+        IStringStream
+        (
+            "( \
+                rhoNMean \
+                rhoMMean \
+                linearKEMean \
+                internalEMean \
+                iDofMean \
+            )"
+        )()
+    );
+
+    PtrList<volScalarField> extensiveVSFs(extensiveVSFNames.size());
+
+    if
+    (
+        !addFieldsToList
+        (
+            mesh,
+            extensiveVSFs,
+            extensiveVSFNames
+        )
+    )
+    {
+        return;
+    }
+
+    wordList extensiveVVFNames(IStringStream ("(momentumMean)")());
+
+    PtrList<volVectorField> extensiveVVFs(extensiveVVFNames.size());
+
+    if
+    (
+        !addFieldsToList
+        (
+            mesh,
+            extensiveVVFs,
+            extensiveVVFNames
+        )
+    )
+    {
+        return;
+    }
+
+    dsmcFields dF
+    (
+        "dsmcFieldsUtility",
+        mesh,
+        dictionary::null,
+        false
+    );
+
+    if (writeResults)
+    {
+        dF.write();
+    }
+}
+
+// ************************************************************************* //

applications/utilities/preProcessing/dsmcInitialise/Make/files

@@ -0,0 +1,3 @@
+dsmcInitialise.C
+
+EXE = $(FOAM_APPBIN)/dsmcInitialise

applications/utilities/preProcessing/dsmcInitialise/Make/options

@@ -0,0 +1,12 @@
+EXE_INC = \
+    -I$(LIB_SRC)/finiteVolume/lnInclude \
+    -I$(LIB_SRC)/lagrangian/basic/lnInclude \
+    -I$(LIB_SRC)/lagrangian/dsmc/lnInclude \
+    -I$(LIB_SRC)/meshTools/lnInclude
+
+EXE_LIBS = \
+    -lmeshTools \
+    -lfiniteVolume \
+    -llagrangian \
+    -ldsmc
+

applications/utilities/preProcessing/dsmcInitialise/dsmcInitialise.C

@@ -22,55 +22,57 @@ License
     along with OpenFOAM; if not, write to the Free Software Foundation,
     Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 
+Application
+    dsmcFoam
+
 Description
+    Initialise a case for dsmcFoam by reading the initialisation dictionary
+    system/dsmcInitialise
 
 \*---------------------------------------------------------------------------*/
 
-// * * * * * * * * * * * * * * * * Constructors  * * * * * * * * * * * * * * //
+#include "fvCFD.H"
+#include "dsmcCloud.H"
 
-//- Construct given size
-template<class T>
-inline Foam::IndirectList<T>::IndirectList
-(
-    const Foam::UList<T>& completeList,
-    const Foam::List<label>& addresses
-)
-:
-    completeList_(completeList),
-    addresses_(addresses)
-{}
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
 
-
-// * * * * * * * * * * * * * * * Member Functions  * * * * * * * * * * * * * //
-
-template<class T>
-inline Foam::label Foam::IndirectList<T>::size() const
+int main(int argc, char *argv[])
 {
-    return addresses_.size();
-}
+    #include "setRootCase.H"
+    #include "createTime.H"
+    #include "createMesh.H"
 
+    // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
 
-template<class T>
-inline const Foam::UList<T>& Foam::IndirectList<T>::
-completeList() const
-{
-    return completeList_;
-}
+    Info<< "Initialising dsmc for Time = " << runTime.timeName() << nl << endl;
 
+    dsmcCloud dsmc("dsmc", mesh);
 
-template<class T>
-inline const Foam::List<Foam::label>& Foam::IndirectList<T>::addresses() const
-{
-    return addresses_;
-}
+    label totalMolecules = dsmc.size();
 
+    if (Pstream::parRun())
+    {
+        reduce(totalMolecules, sumOp<label>());
+    }
 
-// * * * * * * * * * * * * * * * Member Operators  * * * * * * * * * * * * * //
+    Info<< nl << "Total number of molecules added: " << totalMolecules
+        << nl << endl;
 
-template<class T>
-inline const T& Foam::IndirectList<T>::operator[](const Foam::label i) const
-{
-    return completeList_[addresses_[i]];
+    IOstream::defaultPrecision(15);
+
+    if (!mesh.write())
+    {
+        FatalErrorIn(args.executable())
+            << "Failed writing dsmcCloud."
+            << nl << exit(FatalError);
+    }
+
+    Info<< nl << "ClockTime = " << runTime.elapsedClockTime() << " s"
+        << nl << endl;
+
+    Info<< "End\n" << endl;
+
+    return(0);
 }
 
 

applications/utilities/surface/surfaceSplitNonManifolds/surfaceSplitNonManifolds.C

@@ -306,7 +306,7 @@ label findEdge
 
     FatalErrorIn("findEdge") << "Cannot find edge with labels " << v0
         << ' ' << v1 << " in candidates " << edgeLabels
-        << " with vertices:" << IndirectList<edge>(surf.edges(), edgeLabels)()
+        << " with vertices:" << UIndirectList<edge>(surf.edges(), edgeLabels)()
         << abort(FatalError);
 
     return -1;
@@ -346,7 +346,7 @@ label otherEdge
     FatalErrorIn("otherEdge") << "Cannot find other edge on face " << faceI
         << " verts:" << surf.localPoints()[faceI]
         << " connected to point " << pointI
-        << " faceEdges:" << IndirectList<edge>(surf.edges(), fEdges)()
+        << " faceEdges:" << UIndirectList<edge>(surf.edges(), fEdges)()
         << abort(FatalError);
 
     return -1;