GIT: Initial commit after latest foundation merge

tutorials/Allclean

@@ -13,4 +13,4 @@ foamCleanTutorials cases
 
 echo "--------"
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/Allrun

@@ -3,7 +3,7 @@
 # =========                 |
 # \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
 #  \\    /   O peration     |
-#   \\  /    A nd           | Copyright (C) 2011-2014 OpenFOAM Foundation
+#   \\  /    A nd           | Copyright (C) 2011-2016 OpenFOAM Foundation
 #    \\/     M anipulation  |
 #------------------------------------------------------------------------------
 # License
@@ -38,7 +38,7 @@ cd ${0%/*} || exit 1    # Run from this directory
 logReport()
 {
     caseName=`dirname $1 | sed s/"\(.*\)\.\/"/""/g`
-    app=`echo $1 | sed s/"\(.*\)\."/""/g`
+    app=`echo $1 | sed s/"\(.*\)log\."/""/g`
     appAndCase="Application $app - case $caseName"
 
     fatalError=`grep "FOAM FATAL" $1`
@@ -93,4 +93,4 @@ done
 
 find . -name "log.*" -exec cat {} \; >> logs
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/Alltest

@@ -3,7 +3,7 @@
 # =========                 |
 # \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
 #  \\    /   O peration     |
-#   \\  /    A nd           | Copyright (C) 2011-2015 OpenFOAM Foundation
+#   \\  /    A nd           | Copyright (C) 2011-2016 OpenFOAM Foundation
 #    \\/     M anipulation  |
 #------------------------------------------------------------------------------
 # License
@@ -238,4 +238,4 @@ do
     echo "" >> $SOLVERS_FILE
 done
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/DNS/dnsFoam/boxTurb16/Allclean

@@ -7,4 +7,4 @@ cd ${0%/*} || exit 1    # Run from this directory
 cleanCase
 rm -f 0/enstrophy
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/DNS/dnsFoam/boxTurb16/Allrun

@@ -12,4 +12,4 @@ runApplication boxTurb
 runApplication $application
 runApplication enstrophy
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/basic/laplacianFoam/flange/Allclean

@@ -8,4 +8,4 @@ cleanCase
 rm -rf EnSight Ensight Fieldview > /dev/null 2>&1
 rm -f constant/polyMesh/boundary > /dev/null 2>&1
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/basic/laplacianFoam/flange/Allrun

@@ -24,4 +24,4 @@ runApplication foamToEnsight
 runApplication foamToEnsightParts
 runApplication foamToVTK
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/basic/potentialFoam/cylinder/Allclean

@@ -8,4 +8,4 @@ rm -rf 0 > /dev/null 2>&1
 
 cleanCase
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/basic/potentialFoam/cylinder/Allrun

@@ -11,4 +11,4 @@ runApplication blockMesh
 runApplication $application -withFunctionObjects -writePhi -writep
 runApplication streamFunction
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/basic/potentialFoam/pitzDaily/0.org/U

@@ -33,14 +33,12 @@ boundaryField
 
     upperWall
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     lowerWall
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     frontAndBack

tutorials/basic/potentialFoam/pitzDaily/Allclean

@@ -8,4 +8,4 @@ rm -rf 0 > /dev/null 2>&1
 
 cleanCase
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/basic/potentialFoam/pitzDaily/Allrun

@@ -11,4 +11,4 @@ runApplication blockMesh
 runApplication $application -writePhi -writep
 runApplication streamFunction
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/basic/scalarTransportFoam/pitzDaily/0/U

@@ -12262,14 +12262,12 @@ boundaryField
 
     upperWall
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     lowerWall
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     frontAndBack

tutorials/combustion/PDRFoam/flamePropagationWithObstacles/0.org/U

@@ -29,13 +29,11 @@ boundaryField
     }
     ground
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
     blockedFaces
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
     baffleWall
     {

tutorials/combustion/PDRFoam/flamePropagationWithObstacles/Allclean

@@ -13,4 +13,4 @@ rm -rf constant/polyMesh/points
 rm -rf constant/polyMesh/owner
 rm -rf constant/polyMesh/neighbour
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/PDRFoam/flamePropagationWithObstacles/Allrun

@@ -16,4 +16,4 @@ runApplication PDRMesh -overwrite
 # Run
 runApplication `getApplication`
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/XiFoam/ras/Allclean

@@ -21,4 +21,4 @@ do
     removeCase $caseName
 done
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/XiFoam/ras/Allrun

@@ -51,4 +51,4 @@ cloneCase moriyoshiHomogeneous moriyoshiHomogeneousHydrogen
     runApplication `getApplication`
 )
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/chemFoam/gri/Allclean

@@ -8,5 +8,5 @@ cleanCase
 
 \rm -rf 0 chemFoam.out validation/OF_vs_CHEMKINII.eps validation/chemkinII
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 

tutorials/combustion/chemFoam/gri/Allrun

@@ -9,7 +9,6 @@ application=`getApplication`
 
 runApplication $application
 
-(cd validation && ./Allrun)
-
-# ----------------------------------------------------------------- end-of-file
+(cd validation && ./Allrun $*)
 
+#------------------------------------------------------------------------------

tutorials/combustion/chemFoam/gri/validation/Allrun

@@ -9,6 +9,6 @@ grep '^ Time (sec)' ../chemkin/senk.out | awk '{print $4 "    " $8 }' \
 
 ./createGraph
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 
 

tutorials/combustion/chemFoam/gri/validation/createGraph

@@ -21,5 +21,5 @@ gnuplot<<EOF
         "chemkinII" with lines title "Chemkin II" lt -1
 EOF
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 

tutorials/combustion/chemFoam/h2/Allclean

@@ -8,5 +8,5 @@ cleanCase
 
 \rm -rf 0 chemFoam.out validation/OF_vs_CHEMKINII.eps validation/chemkinII
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 

tutorials/combustion/chemFoam/h2/Allrun

@@ -9,7 +9,6 @@ application=`getApplication`
 
 runApplication $application
 
-(cd validation && ./Allrun)
-
-# ----------------------------------------------------------------- end-of-file
+(cd validation && ./Allrun $*)
 
+#------------------------------------------------------------------------------

tutorials/combustion/chemFoam/h2/validation/Allrun

@@ -9,6 +9,6 @@ grep '^ Time (sec)' ../chemkin/senk.out | awk '{print $4 "    " $8 }' \
 
 ./createGraph
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 
 

tutorials/combustion/chemFoam/h2/validation/createGraph

@@ -21,5 +21,5 @@ gnuplot<<EOF
         "chemkinII" with lines title "Chemkin II" lt -1
 EOF
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 

tutorials/combustion/chemFoam/ic8h18/Allclean

@@ -8,5 +8,5 @@ cleanCase
 
 \rm -rf 0 chemFoam.out validation/OF_vs_CHEMKINII.eps validation/chemkinII
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 

tutorials/combustion/chemFoam/ic8h18/Allrun

@@ -9,7 +9,6 @@ application=`getApplication`
 
 runApplication $application
 
-(cd validation && ./Allrun)
-
-# ----------------------------------------------------------------- end-of-file
+(cd validation && ./Allrun $*)
 
+#------------------------------------------------------------------------------

tutorials/combustion/chemFoam/ic8h18/validation/Allrun

@@ -9,6 +9,6 @@ grep '^ Time (sec)' ../chemkin/senk.out | awk '{print $4 "    " $8 }' \
 
 ./createGraph
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 
 

tutorials/combustion/chemFoam/ic8h18/validation/createGraph

@@ -21,5 +21,5 @@ gnuplot<<EOF
         "chemkinII" with lines title "Chemkin II" lt -1
 EOF
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 

tutorials/combustion/chemFoam/nc7h16/Allclean

@@ -8,5 +8,5 @@ cleanCase
 
 \rm -rf 0 chemFoam.out validation/OF_vs_CHEMKINII.eps validation/chemkinII
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 

tutorials/combustion/chemFoam/nc7h16/Allrun

@@ -9,7 +9,6 @@ application=`getApplication`
 
 runApplication $application
 
-(cd validation && ./Allrun)
-
-# ----------------------------------------------------------------- end-of-file
+(cd validation && ./Allrun $*)
 
+#------------------------------------------------------------------------------

tutorials/combustion/chemFoam/nc7h16/validation/Allrun

@@ -9,6 +9,6 @@ grep '^ Time (sec)' ../chemkin/senk.out | awk '{print $4 "    " $8 }' \
 
 ./createGraph
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 
 

tutorials/combustion/chemFoam/nc7h16/validation/createGraph

@@ -21,5 +21,5 @@ gnuplot<<EOF
         "chemkinII" with lines title "Chemkin II" lt -1
 EOF
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------
 

tutorials/combustion/engineFoam/kivaTest/-180/U

@@ -29,14 +29,12 @@ boundaryField
 
     liner
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     cylinderHead
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 }
 

tutorials/combustion/engineFoam/kivaTest/Allclean

@@ -12,4 +12,4 @@ rm -f constant/polyMesh/boundary > /dev/null 2>&1
 
 mv temp180 ./-180
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/engineFoam/kivaTest/Allrun

@@ -11,4 +11,4 @@ runApplication kivaToFoam -file otape17
 
 runApplication $application
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/fireFoam/les/flameSpreadWaterSuppressionPanel/0/filmRegion/Uf

@@ -28,8 +28,7 @@ boundaryField
 
     region0_to_filmRegion_coupledWall // Patch to pyrolysis
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     outlet
@@ -39,8 +38,7 @@ boundaryField
 
     "side.*"
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     inlet

tutorials/combustion/fireFoam/les/flameSpreadWaterSuppressionPanel/Allclean

@@ -11,4 +11,4 @@ rm -rf constant/pyrolysisRegion/polyMesh
 
 rm -rf system/pyrolysisRegion/filmRegion
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/fireFoam/les/flameSpreadWaterSuppressionPanel/Allrun

@@ -38,4 +38,4 @@ runApplication `getApplication`
 
 paraFoam -touchAll
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/fireFoam/les/oppositeBurningPanels/0/N2

@@ -22,26 +22,31 @@ boundaryField
     top
     {
         type            calculated;
+        value           $internalField;
     }
 
     ground
     {
         type            calculated;
+        value           $internalField;
     }
 
     sides
     {
         type            calculated;
+        value           $internalField;
     }
 
     burner
     {
         type            calculated;
+        value           $internalField;
     }
 
     "(region0_to.*)"
     {
         type            calculated;
+        value           $internalField;
     }
 }
 

tutorials/combustion/fireFoam/les/oppositeBurningPanels/Allclean

@@ -10,4 +10,4 @@ rm -rf constant/panelRegion/polyMesh
 rm  -f 0/polyMesh/cellMap
 rm  -f constant/polyMesh/boundary
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/fireFoam/les/oppositeBurningPanels/Allrun

@@ -9,32 +9,35 @@ application=`getApplication`
 
 runApplication blockMesh
 
-runApplication topoSet -dict system/cRefine.topoSetDict
+runApplication -s cRefine \
+    topoSet -dict system/cRefine.topoSetDict
+
 runApplication refineMesh -overwrite -dict system/refineMeshDict
 
-rm log.topoSet
-runApplication topoSet -dict system/f.topoSetDict
+runApplication -s f \
+    topoSet -dict system/f.topoSetDict
 
 # create the pyrolysis region.
 runApplication extrudeToRegionMesh -overwrite
 
-
-rm log.topoSet
-runApplication topoSet -dict system/fBurner.topoSetDict
+runApplication -s fBurner \
+    topoSet -dict system/fBurner.topoSetDict
 
 runApplication createPatch -overwrite
 
-# Decompose mesh, constant/boundaryRadiationProperties and fields
-decomposePar -force -constant > log.decomposePar 2>&1
+runApplication -s master \
+    decomposePar -force
 
-decomposePar -region panelRegion > log.decomposeParPanelRegion 2>&1
+runApplication -s panelRegion \
+    decomposePar -region panelRegion
 
-decomposePar -fields > log.decomposePar 2>&1
+runApplication -s fields \
+    decomposePar -fields
 
-runParallel `getApplication` 6
+runParallel `getApplication`
 
 paraFoam -touch
 paraFoam -touch -region panelRegion
 
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/fireFoam/les/smallPoolFire2D/0/U

@@ -31,8 +31,7 @@ boundaryField
 
     base
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     inlet

tutorials/combustion/fireFoam/les/smallPoolFire2D/0/soot

@@ -24,6 +24,7 @@ boundaryField
     ".*"
     {
         type            calculated;
+        value           $internalField;
     }
 
     frontAndBack

tutorials/combustion/fireFoam/les/smallPoolFire2D/Allrun

@@ -12,4 +12,4 @@ runApplication createPatch -overwrite
 # Run
 runApplication `getApplication`
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/combustion/fireFoam/les/smallPoolFire3D/0/U

@@ -30,8 +30,7 @@ boundaryField
 
     base
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     inlet

tutorials/combustion/fireFoam/les/smallPoolFire3D/Allrun

@@ -12,6 +12,6 @@ runApplication createPatch -overwrite
 runApplication decomposePar -force -constant
 
 # Run
-runParallel $application 4
+runParallel $application
 
-# -----------------------------------------------------------------------------
+#------------------------------------------------------------------------------

tutorials/compressible/rhoCentralDyMFoam/movingCone/0/U

@@ -28,14 +28,12 @@ boundaryField
 
     farFieldMoving
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     fixedWall
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     left
@@ -46,8 +44,7 @@ boundaryField
 
     farField
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     back

tutorials/compressible/rhoCentralFoam/LadenburgJet60psi/0.org/U

@@ -40,8 +40,7 @@ boundaryField
 
     freestreamInlet
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     wedge1 {type wedge;}

tutorials/compressible/rhoCentralFoam/LadenburgJet60psi/0/U

@@ -1261,8 +1261,7 @@ boundaryField
     }
     freestreamInlet
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
     freestream
     {

tutorials/compressible/rhoCentralFoam/biconic25-55Run35/Allclean

@@ -8,4 +8,4 @@ cleanCase
 cleanSamples
 rm -rf constant/polyMesh/boundary
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/compressible/rhoCentralFoam/biconic25-55Run35/Allrun

@@ -31,4 +31,4 @@ rm $CONST/polyMesh/boundary.bak
 runApplication `getApplication`
 
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/compressible/rhoCentralFoam/biconic25-55Run35/sampleCone

@@ -20,7 +20,7 @@ USAGE
     exit 1
 }
 
-# -----------------------------------------------------------------------------
+#------------------------------------------------------------------------------
 
 unset timeOpt
 
@@ -53,4 +53,4 @@ do
     cat ${d}/cone25_${FS} ${d}/cone55_${FS} ${d}/base_${FS} > ${d}/biconic_${FS}
 done
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/compressible/rhoCentralFoam/shockTube/Allclean

@@ -9,4 +9,4 @@ cp -r 0.org 0
 cleanCase
 cleanSamples
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/compressible/rhoCentralFoam/shockTube/Allrun

@@ -8,4 +8,4 @@ runApplication blockMesh
 runApplication setFields
 runApplication `getApplication`
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/compressible/rhoPimpleDyMFoam/annularThermalMixer/Allclean

@@ -9,4 +9,4 @@ rm -rf constant/extendedFeatureEdgeMesh > /dev/null 2>&1
 
 cleanCase
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/compressible/rhoPimpleDyMFoam/annularThermalMixer/Allrun

@@ -21,4 +21,4 @@ cp -r 0.org 0
 
 runApplication $(getApplication)
 
-# ----------------------------------------------------------------- end-of-file
+#------------------------------------------------------------------------------

tutorials/compressible/rhoPimpleFoam/les/pitzDaily/0/U

@@ -37,14 +37,12 @@ boundaryField
 
     upperWall
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     lowerWall
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
 
     frontAndBack

tutorials/compressible/rhoPimpleFoam/ras/angledDuct/0/U

@@ -22,18 +22,15 @@ boundaryField
 {
     front
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
     back
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
     walls
     {
-        type            fixedValue;
-        value           uniform (0 0 0);
+        type            noSlip;
     }
     porosityWall
     {