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690 Commits

Author SHA1 Message Date
e4dc50dcb0 postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
3eec5854be Standardized the selection of required and optional fields in BCs, fvOptions, functionObjects etc.
In most boundary conditions, fvOptions etc. required and optional fields
to be looked-up from the objectRegistry are selected by setting the
keyword corresponding to the standard field name in the BC etc. to the
appropriate name in the objectRegistry.  Usually a default is provided
with sets the field name to the keyword name, e.g. in the
totalPressureFvPatchScalarField the velocity is selected by setting the
keyword 'U' to the appropriate name which defaults to 'U':

        Property     | Description             | Required    | Default value
        U            | velocity field name     | no          | U
        phi          | flux field name         | no          | phi
        .
        .
        .

However, in some BCs and functionObjects and many fvOptions another
convention is used in which the field name keyword is appended by 'Name'
e.g.

        Property     | Description             | Required    | Default value
        pName        | pressure field name     | no          | p
        UName        | velocity field name     | no          | U

This difference in convention is unnecessary and confusing, hinders code
and dictionary reuse and complicates code maintenance.  In this commit
the appended 'Name' is removed from the field selection keywords
standardizing OpenFOAM on the first convention above.
2016-05-21 20:28:20 +01:00
83c7e97655 dynamicCode: Renamed 'redirectType' to 'name' to clarify the purpose
of the entry which is to provide the name of the generated class.

'redirectType' is supported for backward-compatibility.
2016-05-18 23:10:42 +01:00
83bae2efd3 functionObjects: Renamed dictionary entry 'functionObjectLibs' -> 'libs'
This changes simplifies the specification of functionObjects in
controlDict and is consistent with the 'libs' option in controlDict to
load special solver libraries.

Support for the old 'functionObjectLibs' name is supported for backward compatibility.
2016-05-16 22:09:01 +01:00
274d1df8a4 snappyHexMesh: Automatically remove zero-sized patches
All patches are preserved if the 'keepPatches' option is set true.
Patch contributed by Mattijs Janssens
2016-05-13 17:47:38 +01:00
6164c2f262 Standardized the naming of functions which control the writing of fields etc.
to have the prefix 'write' rather than 'output'

So outputTime() -> writeTime()

but 'outputTime()' is still supported for backward-compatibility.

Also removed the redundant secondary-writing functionality from Time
which has been superseded by the 'writeRegisteredObject' functionObject.
2016-05-12 17:38:01 +01:00
c983670c91 functionObjects: Changed options 'outputControl' -> 'writeControl' and 'outputInterval' -> 'writeInterval'
for consistency with the time controls in controlDict and to avoid
unnecessary confusion.  All code and tutorials have been updated.

The old names 'outputControl' and 'outputInterval' are but supported for
backward compatibility but deprecated.
2016-05-12 11:38:11 +01:00
224f014e96 tutorials: Removed unused "useReactionRate" option 2016-05-07 09:40:20 +01:00
cf4b35693c tutorials: Remove the unnecessary "\"s on "cp", "rm" and "mv"
Resolves bug-report http://bugs.openfoam.org/view.php?id=2077
2016-05-05 15:17:55 +01:00
698f135426 tutorials/multiphase/reactingTwoPhaseEulerFoam/RAS/wallBoiling/system/fvSolution: Updated to improve stability 2016-05-03 14:52:38 +01:00
1b34231340 tutorials: Renamed .org -> .orig
See http://www.openfoam.org/mantisbt/view.php?id=2076
  - .org is the file extension for emacs org-mode as well
  - .orig is more to the point (.org isn't always recognized as "original")
  - .original is too long, although more consistent with the convention
    of source code file naming

Update script contributed by Bruno Santos
2016-04-30 21:53:50 +01:00
bbca1fd5e7 reactingTwoPhaseEulerFoam: Corrected kineticTheory frictional stress at walls
Patch contributed by Juho Peltola, VTT

The new JohnsonJacksonSchaefferFrictionalStress model is included and
the LBend tutorial case to demonstrate the need for the changes to the
frictional stress models.

Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2058
2016-04-22 14:25:58 +01:00
e5a029c187 tutorials/multiphase/interDyMFoam/ras/damBreakWithObstacle: Added alphaPhi to correctFluxes
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2062
2016-04-21 21:19:01 +01:00
bbc05bdf7e tutorials/multiphase/interDyMFoam/ras/DTCHull: Updated to use the rigidBodyDynamics solver 2016-04-19 10:35:09 +01:00
d0b5bef948 tutorials/multiphase/interDyMFoam/ras/floatingObject: Updated to use rigidBodyDynamics 2016-04-18 15:41:10 +01:00
4bc77e6aff Sprucing up the tutorials folder and adding -dict to "collapseEdges"
Patch provided by Bruno Santos
Resolves patch application request http://www.openfoam.org/mantisbt/view.php?id=2015
2016-03-06 19:06:44 +00:00
08be9fcb5d Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-06-22 09:19:36 -07:00
36ad131dc9 ENH: Correcting T.particles outlet BC for fluidsedBed 2016-06-22 09:18:58 -07:00
bcb17b23b1 ENH: createPatch: removed createPatch after snappyHexMesh to remove zero-sized patches
This is now handled inside snappyHexMesh with the keepPatches setting.
2016-06-22 11:21:00 +01:00
606b952246 ENH: wallBoiling: underrelax mass transfer, solve intermediates tighter
Fixes wallBoiling mentioned in #141
2016-06-22 10:20:42 +01:00
6905a80c15 Reordering interDyFoam cases for RAS and laminar 2016-06-14 15:09:59 -07:00
ac6f01ed7a Merge branch 'feature-MPPICInterFoam' into 'develop'
Feature mppic inter foam

New MPPICInterFoam solver. Add MPPIC cloud to a VOF approach. Particles volume are considered into transport Eq fluxes.
    Solves for 2 incompressible, isothermal immiscible fluids using a VOF
    (volume of fluid) phase-fraction based interface capturing approach.
    The momentum and other fluid properties are of the "mixture" and a single
    momentum equation is solved.

Solver:
/applications/solvers/multiphase/MPPICInterFoam
Tutorial:
/tutorials/multiphase/MPPICInterFoam/twoPhasePachuka

See merge request !41
2016-06-08 14:04:49 +01:00
af648d7c89 Changing header in tutorial files and updating pEq.H 2016-06-03 09:31:56 -07:00
e1f2329222 STY: Updating function in pEq, ErrorInFunction and tutorial web site name 2016-06-03 09:16:34 -07:00
ab2f17e6fb Changed tutorial location 2016-06-02 10:27:25 -07:00
45264f1b2d Deleting files from tutorial 2016-06-01 11:45:17 -07:00
6c92bfdf5a Deleting files from tutorial 2016-06-01 11:37:40 -07:00
00d4761aa8 MPPICInterFoam and tutorial 2016-06-01 11:08:06 -07:00
d141b3c9b5 ENH: Adding interCondensingEvaporatingFoam and tutorial 2016-05-31 14:41:47 -07:00
16dfd33db8 ENH: Tutorials - updates 2016-04-26 14:32:19 +01:00
a7dcf8fc61 ENH: Tutorials - updated use of -log to use -s 2016-04-26 09:31:44 +01:00
b9313ef2fe ENH: Consistency updates after Foundation merge and code tidying 2016-04-25 16:46:56 +01:00
fd9d801e2d GIT: Initial commit after latest foundation merge 2016-04-25 11:40:48 +01:00
e12e1b172d tutorials/.*/bubbleColumn: Corrected name of temperature fields
Resolves bug-report http://openfoam.org/mantisbt/view.php?id=2003
2016-02-19 12:19:32 +00:00
350d03246e scripts: Reformat with consistent section separators 2016-02-15 18:30:24 +00:00
cfa7678ba8 foamRunTutorials: Rationalized support for the "-test" option
RunFunctions: Added "isTest()" argument parsing function
tutorials: Updated Allrun scripts to propagate the "-test" option
tutorials: Removed the lower Alltest scripts and updated the Allrun to
    use the "isTest()" function to handle test-specific operation
2016-02-15 15:49:05 +00:00
caf3c353d3 tutorials: Simplified the Allrun and Allclean scripts 2016-02-14 18:32:34 +00:00
9cf419dc22 tutorials/multiphase/interFoam/ras/damBreakPorousBaffle: Use PIMPLE outer correctors to improve stability 2016-02-14 10:44:34 +00:00
daf44fda3d tutorials and templates: Updated wall BC for velocity to noSlip 2016-02-09 20:08:34 +00:00
49f1c7e29a oscillatingFixedValue BC replaced by uniformFixedValue with the new Function1Types::Sine
For example the sinusoidal motion of the floating object in the
potentialFreeSurfaceFoam/oscillatingBox tutorial is now specified thus

    floatingObject
    {
        type            fixedNormalInletOutletVelocity;

        fixTangentialInflow false;

        normalVelocity
        {
            type            uniformFixedValue;
            uniformValue    sine;
            uniformValueCoeffs
            {
                frequency 1;
                amplitude table
                (
                    (   0     0)
                    (  10 0.025)
                    (1000 0.025)
                );
                scale     (0 1 0);
                level     (0 0 0);
            }
        }

        value           uniform (0 0 0);
    }

rather than using

    floatingObject
    {
        type            fixedNormalInletOutletVelocity;

        fixTangentialInflow false;

        normalVelocity
        {
            type            oscillatingFixedValue;
            refValue        uniform (0 1 0);
            offset          (0 -1 0);
            amplitude       table
            (
                (   0     0)
                (  10 0.025)
                (1000 0.025)
            );
            frequency       constant 1;
        }

        value           uniform (0 0 0);
    }
2016-02-09 08:57:42 +00:00
b3d47f0423 bin/tools/RunFunctions: runParallel now obtains the number of processors from numberOfSubdomains
in decomposeParDict.

This default number of processors may be overridden by the new "-np"
option to runParallel which must be specified before the application
name e.g.:

runParallel -np 4 pisoFoam
2016-01-27 14:19:25 +00:00
e852970330 ENH: motorBike: tutorial with dynamic refinement across snappyHexMesh mesh 2016-01-21 17:46:40 +00:00
56fa7c0906 Update code to use the simpler C++11 template syntax removing spaces between closing ">"s 2016-01-10 22:41:16 +00:00
d36f1418cd STYLE: Updated links 2016-01-08 12:43:01 +00:00
c33a741327 ENH: Changing div scheme for T 2016-01-05 11:19:14 -08:00
044440b1d3 ENH: Adding fvOption constrain to scalarTransportFoam.
Changing to adjustableTimeStep the tutorial reactingTwoPhaseEulerFoam/laminar/bubbleColumnIATE
2016-01-04 14:12:49 -08:00
e04158fda1 Reducing total time simulation to 10 sec 2016-01-04 12:28:08 -08:00
0f3f53df57 ENH: Adding uniformJump true to the porousJump tutorial. 2016-01-04 11:44:49 -08:00
18bc62a328 BUG:tutorials: missing boundary file.
Fixes #45
2015-12-31 12:07:43 +00:00
f0c3e8d599 STYLE: Updated version to 'plus' 2015-12-22 23:14:17 +00:00