Commit Graph

1626 Commits

Author SHA1 Message Date
4ce77f6843 Merge branch 'master' into develop 2017-04-25 12:31:22 +01:00
c085c5df25 Merged the edgeMesh library into the meshTools library 2017-04-21 10:38:53 +01:00
89f2eff565 STYLE: improve usage notes for transformPoints, surfaceTransformPoints 2017-04-20 16:27:44 +02:00
5c51836501 The "<type>Coeffs" sub-dictionary is now optional for most model parameters
except turbulence and lagrangian which will also be updated shortly.

For example in the nonNewtonianIcoFoam offsetCylinder tutorial the viscosity
model coefficients may be specified in the corresponding "<type>Coeffs"
sub-dictionary:

transportModel  CrossPowerLaw;

CrossPowerLawCoeffs
{
    nu0         [0 2 -1 0 0 0 0]  0.01;
    nuInf       [0 2 -1 0 0 0 0]  10;
    m           [0 0 1 0 0 0 0]   0.4;
    n           [0 0 0 0 0 0 0]   3;
}

BirdCarreauCoeffs
{
    nu0         [0 2 -1 0 0 0 0]  1e-06;
    nuInf       [0 2 -1 0 0 0 0]  1e-06;
    k           [0 0 1 0 0 0 0]   0;
    n           [0 0 0 0 0 0 0]   1;
}

which allows a quick change between models, or using the simpler

transportModel  CrossPowerLaw;

nu0         [0 2 -1 0 0 0 0]  0.01;
nuInf       [0 2 -1 0 0 0 0]  10;
m           [0 0 1 0 0 0 0]   0.4;
n           [0 0 0 0 0 0 0]   3;

if quick switching between models is not required.

To support this more convenient parameter specification the inconsistent
specification of seedSampleSet in the streamLine and wallBoundedStreamLine
functionObjects had to be corrected from

    // Seeding method.
    seedSampleSet   uniform;  //cloud; //triSurfaceMeshPointSet;

    uniformCoeffs
    {
        type        uniform;
        axis        x;  //distance;

        // Note: tracks slightly offset so as not to be on a face
        start       (-1.001 -0.05 0.0011);
        end         (-1.001 -0.05 1.0011);
        nPoints     20;
    }

to the simpler

    // Seeding method.
    seedSampleSet
    {
        type        uniform;
        axis        x;  //distance;

        // Note: tracks slightly offset so as not to be on a face
        start       (-1.001 -0.05 0.0011);
        end         (-1.001 -0.05 1.0011);
        nPoints     20;
    }

which also support the "<type>Coeffs" form

    // Seeding method.
    seedSampleSet
    {
        type        uniform;

        uniformCoeffs
        {
            axis        x;  //distance;

            // Note: tracks slightly offset so as not to be on a face
            start       (-1.001 -0.05 0.0011);
            end         (-1.001 -0.05 1.0011);
            nPoints     20;
        }
    }
2017-04-20 09:14:48 +01:00
c072f911c9 BUG: Corrected compilation errors 2017-04-19 13:44:54 +01:00
f95dbc2049 ENH: refineWallLayer: enable parallel operation. Fixes #454. 2017-04-13 16:30:46 +01:00
dbc1e37a62 BUG: shm: layerSets gets removed. Fixes #453. 2017-04-13 11:26:35 +01:00
140c5110fe STYLE: remove tabs from files and shorten line-length. 2017-04-10 16:11:33 +02:00
5d15a13247 STYLE: use FOAM_UTILITIES in Make/options
- consistent with use of FOAM_SOLVERS, and reduces reliance on the FOAM_APP
  env variable
2017-04-07 08:17:43 +02:00
96fd3c9367 STYLE: consistent use of LIB_SRC in Make/options
- had occasional remnant use of FOAM_SRC
2017-04-06 23:56:23 +02:00
dd78e042fe ENH: reduce reliance on FOAM_EXT_LIBBIN during builds
- just check WM_PROJECT_DIR instead.

- provide a fallback value when FOAM_EXT_LIBBIN might actually be needed.

Only strictly need FOAM_EXT_LIBBIN for scotch/metis decomposition, and
when these are actually supplied by ThirdParty.
All other ThirdParty dependencies are referenced by BOOST_ARCH_PATH etc.

Can therefore drop the FOAM_EXT_LIBBIN dependency for VTK-related
things, which do not use scotch/metis anyhow.
2017-04-04 15:28:42 +02:00
7d048c71be Merge remote-tracking branch 'origin/master' into develop 2017-04-04 16:15:10 +02:00
638aded7cc BUG: bad shell construct for building optional component 2017-04-04 14:13:55 +02:00
45381b1085 MRG: Integrated Foundation code to commit 19e602b 2017-03-28 11:30:10 +01:00
07ce0a547a COMP: try harder to find/use zoltan library 2017-03-28 10:57:37 +02:00
436ec1cf1f MRG: Integrated Foundation code to commit ba4dbed 2017-03-23 12:11:49 +00:00
04c3d535b0 MRG: Integrated Foundation code to commit 47bd8e1 2017-03-23 10:12:38 +00:00
96ad725a0b Updated UPstream::commsTypes to use the C++11 enum class 2017-03-10 19:54:55 +00:00
a886410d16 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-03-13 12:02:22 +00:00
aa6b835104 ENH: use fileName::nameLessExt() instead of fileName::name(bool)
- the purpose is more explicit, without needing to check documentation
  about what the bool parameter means.

STYLE: improve formatting of fileName documentation
2017-03-10 11:49:56 +01:00
2ce0aaddd4 ENH: splitMeshRegions: correct header. 2017-03-01 11:48:00 +00:00
a748ce1eaf STYLE: resolve COMP_FLAGS, COMPILE_FLAGS mismash in favour of COMP_FLAGS 2017-02-23 16:25:38 +01:00
07ec2b3abd STYLE: eliminate most use of _foamSource outside of the etc/ hierarchy 2017-02-23 10:58:55 +01:00
0ffae6461a ENH: creating a bounding box without points yields an inverted box
- The code create a box with a (0,0,0) point.
  The new definition is more logical and makes it very easy to grow
  the bounding box to include new points. It also simplifies much of
  the logic in the constructors.

- Use ROOTVGREAT instead of VGREAT for sizing greatBox and invertedBox.
  Avoids some overflow issues reported by Mattijs (thus GREAT has been
  used in treeBoundBox), but might still need further revision.
2017-02-01 12:15:00 +00:00
5dd24f4968 Removed unhelpful clutter 2017-01-26 17:47:24 +00:00
722d23f59c ENH: additional methods/operators for boundBox (related to #196)
- Constructor for bounding box of a single point.

- add(boundBox), add(point) ...
  -> Extend box to enclose the second box or point(s).

  Eg,
      bb.add(pt);
  vs.
      bb.min() = Foam::min(bb.min(), pt);
      bb.max() = Foam::max(bb.max(), pt);

Also works with other bounding boxes.
  Eg,
      bb.add(bb2);
      // OR
      bb += bb2;
  vs.
      bb.min() = Foam::min(bb.min(), bb2.min());
      bb.max() = Foam::max(bb.max(), bb2.max());

'+=' operator allows the reduction to be used in parallel
gather/scatter operations.

A global '+' operator is not currently needed.

Note: may be useful in the future to have a 'clear()' method
that resets to a zero-sized (inverted) box.

STYLE: make many bounding box constructors explicit
2017-01-25 19:26:50 +01:00
17d76e6261 ENH: boundBox 'reduce' method (related to #196)
reduce()
- parallel reduction of min/max values.
  Reduces coding for the callers.

  Eg,
      bb.reduce();

  instead of the previous method:
      reduce(bb.min(), minOp<point>());
      reduce(bb.max(), maxOp<point>());

STYLE:

- use initializer list for creating static content
- use point::min/point::max when defining standard boxes
2017-01-25 18:52:37 +01:00
1cb2966722 ENH: add blockMesh -sets option to write cellZones as cellSets (closes #348) 2017-01-25 13:16:49 +01:00
4e5dc43418 snappyHexMesh: Added "noRefinement" writeFlag to control the writing of cellLevel, pointLevel etc. files
By default snappyHexMesh writes files relating to the hex-splitting process into
the polyMesh directory: cellLevel level0Edge pointLevel surfaceIndex

but by setting the noRefinement flag:

writeFlags
(
    noRefinement
    .
    .
    .
);

these optional files which are generally not needed are not written.

If you run the three stages of snappyHexMesh separately or run a dynamic mesh
solver supporting refinement and unrefinement these files are needed
and "noRefinement" should not be set.
2017-01-24 22:28:36 +00:00
9b319dab61 blockMesh: Delete the polyMesh directory before meshing
unless the blockMeshDict is in the polyMesh directory or the "-noClean" option
is specified.

This avoids problems running snappyHexMesh without first clearing files from
polyMesh which interfere with the operation of snappyHexMesh.
2017-01-24 16:18:20 +00:00
8632583934 Removed trailing blank lines
Resolves bug-report https://bugs.openfoam.org/view.php?id=2438
2017-01-19 20:17:47 +00:00
e1730cf1f1 setsToZones: Add support for multi-region cases
Patch contributed by Bruno Santos
Resolves bug-report https://bugs.openfoam.org/view.php?id=2437
2017-01-19 08:17:54 +00:00
126125c185 Rationalized the keyword to specify a file name in a dictionary to 'file'
e.g. in tutorials/heatTransfer/buoyantSimpleFoam/externalCoupledCavity/0/T

    hot
    {
        type            externalCoupledTemperature;
        commsDir        "${FOAM_CASE}/comms";
        file            "data";
        initByExternal  yes;
        log             true;
        value           uniform 307.75; // 34.6 degC
    }

Previously both 'file' and 'fileName' were used inconsistently in different
classes and given that there is no confusion or ambiguity introduced by using
the simpler 'file' rather than 'fileName' this change simplifies the use and
maintenance of OpenFOAM.
2017-01-07 09:38:54 +00:00
f8e9a0dbf5 fluentMeshToFoam: Added '-2D' option consistent with plot3dToFoam
Patch contributed by Bruno Santos
Resolves patch request https://bugs.openfoam.org/view.php?id=2238
2017-01-05 15:59:42 +00:00
c21d0d3642 Make/options: Added -lscotchDecomp where appropriate
Patch contributed by Bruno Santos
Resolves patch request https://bugs.openfoam.org/view.php?id=2410
2016-12-27 15:26:53 +00:00
d2fc56d6be STYLE: added note about limitation of the ccm conversion 2016-12-22 17:44:21 +01:00
608bb5d83b COMP: update lnInclude directories when building (issue #364)
- Could be related to interrupted builds.
  So if there are any parts of the build that rely on an explicit
  'wmakeLnInclude', make sure that the contents are properly updated.

--

ENH: improved feedback from top-level Allwmake

- Report which section (libraries, applications) is being built.

- Provide final summary of date, version, etc, which can be helpful
  for later diagnosis or record keeping.

- The -log=XXX option for Allwmake now accepts a directory name
  and automatically appends an appropriate log name.
  Eg,
      ./Allwmake -log=logs/  ->> logs/log.linux64GccDPInt32Opt

  The default name is built from the value of WM_OPTIONS.

--

BUG: shell not exiting properly in combination with -log option

- the use of 'tee' causes the shell to hang around.
  Added an explicit exit to catch this.

--

- Detecting the '-k' (-non-stop) option at the top-level Allwmake, which
  may improve robustness.

- Explicit continue-on-error for foamyMesh (as optional component)

- unify format of script messages for better readability

COMP: reduce warnings when building Pstream (old-style casts in openmpi)
2016-12-22 11:26:29 +01:00
0211b0a43b STYLE: correct the documented input names in header files (fixes #360) 2016-12-21 12:15:03 +01:00
23a6cadfa6 BUG: redistributePar: remove inconsistent *ProcAddressing. Fixes #351. 2016-12-19 12:58:49 +00:00
91f8176a75 STYLE: using messaging macros when referring to function name 2016-12-16 16:56:55 +00:00
af74809786 ENH: increase precision of points for some mesh conversion applications 2016-12-15 21:35:14 +01:00
a32a915d2e BUG: polyMesh removeFiles side-effect for blockMesh viewer (issue #346)
- polyMesh constructor from cell shapes invoked 'removeFiles'.
  This may or may not be what the caller wants or expects.
  With the ParaView blockMesh viewer, this behaviour causes deletion of
  all mesh data (points, faces, etc) when the viewer is refreshed.

  Triggered even when just building the blockMesh topology.

- only a few places that construct a polyMesh from cell shapes
  (mostly mesh conversion utilities).
  Ensure that the file removal (if any) occurs in the application
  and *not* as a side-effect of calling the polyMesh constructor.

--

  blockMesh (application)
    - The placement of the removeFiles seems to also remove freshly
      generated sets (Bug or feature to remove sets?)

  +-----------------------+---------------+------------------+
  | Application           | Constructor   | removeFiles      |
  |                       | (patch info)  | new / existing   |
  +-----------------------+---------------+------------------+
  | blockMesh             | dictionary    | existing         |
  | ansysToFoam           | names         | new              |
  | cfx4ToFoam            | dictionary    | new              |
  | fluentMeshToFoam      | names         | new              |
  | gambitToFoam          | dictionary    | new              |
  | gmshToFoam            | names         | new              |
  | ideasUnvToFoam        | names         | new              |
  | kivaToFoam            | dictionary    | new              |
  | mshToFoam             | names         | new              |
  | netgenNeutralToFoam   | names         | new              |
  | plot3dToFoam          | names         | new              |
  | tetgenToFoam          | names         | new              |
  | vtkUnstructuredToFoam | names         | new              |
  +-----------------------+---------------+------------------+
2016-12-15 19:07:05 +01:00
4f4b1d76c4 BUG: renumberMesh: Checking for cellProcAddressing after deleting it.
This is part of #340.
2016-12-14 17:21:56 +00:00
a3ef5cd137 Merge branch 'feature-chunkingComms' into 'develop'
Pstream: added maxCommsSize setting to do (unstructured) parallel transfers in blocks.

Tested:
- with maxCommsSize 0 produces exactly same result as plus.develop
- compiles with label64
- with maxCommsSize e.g. 3 produces exactly same result as plus.develop
- with maxCommsSize=0 exactly the same messages (with Pstream::debug = 1) as plus.develop

See merge request !85
2016-12-14 15:18:42 +00:00
4ff163aed7 COMP: combinePatchFaces: missing include file 2016-12-14 11:45:32 +00:00
2c7eff8d6b Merge remote-tracking branch 'origin/feature-cellSetRemove' into develop 2016-12-07 14:13:00 +00:00
4a77294c7c ENH: renumberMesh: remove old files 2016-12-05 15:24:52 +00:00
6f2b2aff40 STYLE: reduce script verbosity 2016-12-13 08:15:00 +01:00
c0f44ac4f3 MRG: Integrated foundation code 2016-12-12 12:10:29 +00:00
026ed13c10 ENH: warn user when using constant/polyMesh/blockMeshDict (issue #309)
- the user might otherwise be unaware of the changed location
2016-11-29 12:14:48 +01:00