Commit Graph

397 Commits

Author SHA1 Message Date
09bc29a8d1 COMP: avoid some implicit linkage (#1238) 2019-04-30 11:28:23 +02:00
686e358982 COMP: adjust compilation order with updated interdependencies
- Eg, with surface writers now in surfMesh, there are fewer libraries
  depending on conversion and sampling.

COMP: regularize linkage ordering and avoid some implicit linkage (#1238)
2019-04-28 14:44:33 +02:00
310482dd63 COMP: adjust compilation order. Can compile OSspecific before Pstream
STYLE: report MPI flavour (WM_MPLIB) when making mpi-related libraries
2019-04-11 18:22:33 +02:00
0e6a160639 ENH: improve handling of pt-scotch headers/libraries
- provide dedicated detection 'have_ptscotch' function that can be
  used after the 'have_scotch' function.

  It sets the PTSCOTCH_ARCH_PATH, PTSCOTCH_INC_DIR, PTSCOTCH_LIB_DIR
  and helps when the serial and parallel versions are located with
  different logic.
2019-04-05 13:10:53 +02:00
d1905f9951 ENH: exact: use parallel decomposition method 2019-03-20 15:29:47 +00:00
efd84d01b2 STYLE: adjust some internal variables names in hierarchGeomDecomp 2019-03-20 12:02:42 +01:00
05808cd586 ENH: add handling of lib/exe file extensions in makefile (#1238)
- relocates some logic from makefiles/general into platform-specific
  overrides
2019-03-14 10:42:57 +01:00
69b55bf26d ENH: exact: new patchDistMethod 2019-02-18 15:31:42 +00:00
77e51249c7 ENH: distributedTriSurfaceMesh: auto-decomposition; inside/outside support 2019-02-18 13:29:01 +00:00
e08e23aff4 ENH: scotchDecomp: check validity of processorWeights. Fixes #1207. 2019-02-14 12:40:25 +00:00
6b6e5b8ea2 ENH: for-range, forAllIters() ... in parallel/
- reduced clutter when iterating over containers
2019-01-07 09:20:51 +01:00
988e4cad7f BOT: Added OpenCFD copyright prior to transfer - moved files 2019-02-06 14:22:42 +00:00
4f6bea3264 BOT: Added OpenCFD copyright prior to transfer - same file locations 2019-02-06 12:49:44 +00:00
b921ae298e BOT: Cleaned up header files 2019-02-06 12:28:23 +00:00
2067014079 ENH: minor consistency improvements for bounding box
- a valid() method (same as !empty() call) for consistency with other
  containers and data types

- a centre() method (same as midpoint() method) for consistency with
  other OpenFOAM geometric entities
2019-01-09 09:32:23 +01:00
e2bc0b55b9 COMP: use std::move() explicitly to avoid copying 2019-01-02 15:56:54 +01:00
1d85fecf4d ENH: use Zero when zero-initializing types
- makes the intent clearer and avoids the need for additional
  constructor casting. Eg,

      labelList(10, Zero)    vs.  labelList(10, 0)
      scalarField(10, Zero)  vs.  scalarField(10, scalar(0))
      vectorField(10, Zero)  vs.  vectorField(10, vector::zero)
2018-12-11 23:50:15 +01:00
e761570986 ENH: reduce number of warnings emitted by hierarchGeomDecomp
- it is sufficient to provide the total number of times that findBinary()
  failed instead of flooding the screen with messages

  Full verbose warnings still emitted when debugging is on.
2018-12-13 18:26:30 +01:00
a93a1abec7 COMP: define Scotch and Zoltan include dirs before mpi directories
- the local third-party headers are to be searched before any MPI
  include directories. This stops the situation where an mpi-specific
  version of ptscotch.h is installed into the MPI directories.

  This "system" version may well have a different SCOTCH_Num size
  (32 bit vs 64 bit) from the third-party library etc.
2018-12-11 18:50:19 +01:00
41a03f3790 ENH: add regular expressions for reconstructPar, mapFieldsPar -fields option
- improved flexibility

- reconstruction of Lagrangian positions/fields now handled as a class
  for better modularity
2018-11-28 08:36:17 +01:00
ffec4c6fa7 STYLE: more consistent formatting for deprecated items
- Start brief descriptions with 'Deprecated(YYYY-MM)' so that it is
  readily visible in the short method description. Consistent date
  format (YYYY-MM), placed immediately after the \deprecated tag.
2018-11-11 17:17:33 +01:00
91cfe4c271 ENH: add wordRes::matching() method
- returns indices of matching entries.
2018-11-09 21:21:15 +01:00
dff2569c7f GIT: commit text missed in squashed merge
commit 3f9c7bf411
    commit 3cf177e759

====

ENH: add geometric decomposition constraint (issue #921)

- geometric decomposition constraints may be used to prevent the
  decomposition of regions of the mesh.

  The geometric constraint is applied according to the face centres,
  which define the connectivity between cells.

  Specified in decomposeParDict

    constraints
    {
        geometric
        {
            type    geometric;

            geometry
            {
                box1
                {
                    type    box;
                    min     (-10 -10 -10);
                    max     (1 1 1);
                }

                ball1
                {
                    type    sphere;
                    origin  (-2 -2 1);
                    radius  1;
                }
            }
        }
    }

ENH: add 'grow' option for geometric decomposition constraint (issue #921)

- the 'grow' option includes an additional check to include cell faces
  for any cell that already has two or more of its faces "unblocked".
  This could indicate a connection over a corner, but does not distinguish
  between connectivity introduced by the constraint and the connectivity
  defined by other constraints.

ENH: geometric decomposition constraint using topoSetFaceSource (issue #921)

- replaced use of searchableSurface with a more general and
  more efficient topoSetFaceSource instead.
  Since searchableSurface is also available as a topoSetFaceSource,
  there is no loss in functionality, but using topoSetFaceSource allow
  directly looping over the faces without creating of an additional
  List of volumeTypes.
2018-11-08 21:55:39 +01:00
3cf177e759 Work-package-09 geometric constraint 2018-11-08 20:50:47 +00:00
a7a346b206 STYLE: indentation for FatalIOErrorInFunction calls 2018-11-06 09:49:22 +01:00
f16c417fff CONFIG: mismatch in keyword for singleProcessorFaceSets
- catch some dictionary entries from pre-develop branch
2018-10-19 22:18:06 +02:00
07dafe7b0b STYLE: use range-for when looping dictionary entries.
- as part of the cleanup of dictionary access methods (c6520033c9)
  made the dictionary class single inheritance from IDLList<entry>.

  This eliminates any ambiguities for iterators and allows
  for simple use of range-for looping.

  Eg,
      for (const entry& e : topDict))
      {
          Info<< "entry:" << e.keyword() << " is dict:" << e.isDict() << nl;
      }

   vs

      forAllConstIter(dictionary, topDict, iter))
      {
          Info<< "entry:" << iter().keyword()
              << " is dict:" << iter().isDict() << nl;
      }
2018-10-19 13:08:24 +02:00
4e04c1966f ENH: use dictionary::get<word>() instead of lookup() in a few places 2018-10-19 09:11:31 +02:00
3b74512231 ENH: cleanup of Enum class
- more dictionary-like methods, enforce keyType::LITERAL for all
  lookups to avoid any spurious keyword matching.

- new readEntry, readIfPresent methods

- The get() method replaces the now deprecate lookup() method.

- Deprecate lookupOrFailsafe()
  Failsafe behaviour is now an optional parameter for lookupOrDefault,
  which makes it easier to tailor behaviour at runtime.

- output of the names is now always flatted without line-breaks.
  Thus,

     os << flatOutput(someEnumNames.names()) << nl;
     os << someEnumNames << nl;

  both generate the same output.

- Constructor now uses C-string (const char*) directly instead of
  Foam::word in its initializer_list.

- Remove special enum + initializer_list constructor form since
  it can create unbounded lookup indices.

- Removd old hasEnum, hasName forms that were provided during initial
  transition from NamedEnum.

- Added static_assert on Enum contents to restrict to enum or
  integral values.  Should not likely be using this class to enumerate
  other things since it internally uses an 'int' for its values.

  Changed volumeType accordingly to enumerate on its type (enum),
  not the class itself.
2018-10-18 12:57:32 +02:00
8fabc32539 ENH: simplify objectRegistry access names (issue #322)
New name:  findObject(), cfindObject()
  Old name:  lookupObjectPtr()

      Return a const pointer or nullptr on failure.

  New name:  findObject()
  Old name:  --

      Return a non-const pointer or nullptr on failure.

  New name:  getObjectPtr()
  Old name:  lookupObjectRefPtr()

      Return a non-const pointer or nullptr on failure.
      Can be called on a const object and it will perform a
      const_cast.

- use these updated names and functionality in more places

NB: The older methods names are deprecated, but continue to be defined.
2018-10-17 16:44:10 +02:00
8d590dd780 STYLE: decompistionConstraint: indentation 2018-10-17 08:55:55 +01:00
c6520033c9 ENH: rationalize dictionary access methods
- use keyType::option enum to consolidate searching options.
  These enumeration names should be more intuitive to use
  and improve code readability.

    Eg,   lookupEntry(key, keyType::REGEX);
    vs    lookupEntry(key, false, true);

  or

    Eg,   lookupEntry(key, keyType::LITERAL_RECURSIVE);
    vs    lookupEntry(key, true, false);

- new findEntry(), findDict(), findScoped() methods with consolidated
  search options for shorter naming and access names more closely
  aligned with other components. Behave simliarly to the
  methods lookupEntryPtr(), subDictPtr(), lookupScopedEntryPtr(),
  respectively. Default search parameters consistent with lookupEntry().

    Eg, const entry* e = dict.findEntry(key);
    vs  const entry* e = dict.lookupEntryPtr(key, false, true);

- added '*' and '->' dereference operators to dictionary searchers.
2018-10-15 16:16:12 +02:00
8eddcc072a ENH: avoid readScalar, readLabel etc from dictionary (#762, #1033)
- use the dictionary 'get' methods instead of readScalar for
  additional checking

     Unchecked:  readScalar(dict.lookup("key"));
     Checked:    dict.get<scalar>("key");

- In templated classes that also inherit from a dictionary, an additional
  'template' keyword will be required. Eg,

     this->coeffsDict().template get<scalar>("key");

  For this common use case, the predefined getXXX shortcuts may be
  useful. Eg,

     this->coeffsDict().getScalar("key");
2018-10-12 08:14:47 +02:00
13778f7647 ENH: use dictionary::readEntry for detection of input errors (#762, #1033)
- instead of   dict.lookup(name) >> val;
  can use      dict.readEntry(name, val);

  for checking of input token sizes.
  This helps catch certain types of input errors:

  {

      key1 ;                // <- Missing value
      key2 1234             // <- Missing ';' terminator
      key3 val;
  }

STYLE: readIfPresent() instead of 'if found ...' in a few more places.
2018-10-05 10:15:13 +02:00
64c3e484bb STYLE: add nBoundaryFaces() method to primitiveMesh
- nBoundaryFaces() is often used and is identical to
  (nFaces() - nInternalFaces()).

- forward the mesh nInternalFaces() and nBoundaryFaces() to
  polyBoundaryMesh as nFaces() and start() respectively,
  for use when operating on a polyBoundaryMesh.

STYLE:

- use identity() function with starting offset when creating boundary maps.

     labelList map
     (
         identity(mesh.nBoundaryFaces(), mesh.nInternalFaces())
     );

  vs.

     labelList map(mesh.nBoundaryFaces());
     forAll(map, i)
     {
         map[i] = mesh.nInternalFaces() + i;
     }
2018-09-27 10:17:30 +02:00
c1964d7807 ENH: distinguish between face areaNormal/unitNormal in the code 2018-08-10 15:43:06 +02:00
2b869824f2 STYLE: additional description header for decomposition details 2018-08-09 19:05:11 +02:00
88e5334a9f ENH: IOobject::selectIO helper method
- centralizes IOobject handling and treatment of alternative locations.
  If an alternative file location is specified, it will be used instead.

- provide decompositionMethod::canonicalName instead of using
  "decomposeParDict" in various places.
2018-08-02 17:39:17 +02:00
d7d4a6e834 Merge remote-tracking branch 'origin/develop' into develop 2018-07-26 17:40:52 +02:00
f17e486801 ENH: decompositionMethod: check dimensions. See #937.
Changed into warning since e.g. tutorials/combustion/fireFoam/LES/compartmentFire
uses columns of 1D stacks so they've got empty but are still 3D.
2018-07-26 16:21:51 +01:00
02ad76df4f ENH: allow wordHashSet filter for IOobjectList::names
- simplifies usage.
  Support syncPar check on names() to detect inconsistencies.

- simplify readFields, ReadFields and other routines by using these
  new methods.
2018-07-26 14:56:52 +02:00
dbe0db1d9a ENH: fvMeshSubset improvements (issue #951)
- what was previously termed 'setLargeCellSubset()' is now simply
  'setCellSubset()' and supports memory efficient interfaces.

  The new parameter ordering avoids ambiguities caused by default
  parameters.

  Old parameter order:

      setLargeCellSubset
      (
          const labelList& region,
          const label currentRegion,
          const label patchID = -1,
          const bool syncCouples = true
      );

  New parameter order:

      setCellSubset
      (
          const label regioni,
          const labelUList& regions,
          const label patchID = -1,
          const bool syncCouples = true
      );

   And without ambiguity:

      setCellSubset
      (
          const labelUList& selectedCells,
          const label patchID = -1,
          const bool syncCouples = true
      );

- support bitSet directly for specifying the selectedCells for
  memory efficiency and ease of use.

- Additional constructors to perform setCellSubset() immediately,
  which simplifies coding.

  For example,

      meshParts.set
      (
          zonei,
          new fvMeshSubset(mesh, selectedCells)
      );

  Or even

      return autoPtr<fvMeshSubset>::New(mesh, selectedCells);
2018-07-25 18:58:00 +02:00
3bb5cef5bf ENH: decompsition: check for mesh dimensions. Fixes #937. 2018-07-18 09:29:28 +01:00
f0a92b11d1 STYLE: adjust AMI information (issue #860)
- use "min:xxx" for consistency with other outputs

- adjust decompositionInformation as well
2018-06-13 15:26:59 +02:00
35d682a4fb COMP: make the scotch librt dependency conditional 2018-06-01 14:17:41 +02:00
f9fe71815a STYLE: consistent use of '= delete' for removed constructors/assignments
- make the purpose more explicit, and reduces some work for the
  compiler as well.
2018-05-30 12:03:17 +02:00
6b6b36afd3 STYLE: revert bitSet/HashSet setMany() to set() method (issue #837)
- improves backward compatibility and more naming consistency.
  Retain setMany(iter1, iter2) to avoid ambiguity with the
  PackedList::set(index, value) method.
2018-05-29 17:38:02 +02:00
7e270fc482 STYLE: formatting of scotch options 2018-05-29 09:57:30 +02:00
ca6b6cee8d BUG: decomposeParDict: ignores mesh region. Fixes #848. 2018-05-29 10:26:22 +01:00
4289242c07 Merge remote-tracking branch 'origin/master' into develop 2018-05-16 16:07:00 +01:00