Commit Graph

123 Commits

Author SHA1 Message Date
115a291b8a postProcess: Added call to functionObject::end() at end of time-loop
Resolves bug-report http://bugs.openfoam.org/view.php?id=2148
2016-07-19 11:57:37 +01:00
7200384f18 Corrected documentation for Doxygen 2016-06-21 11:04:34 +01:00
71fdcab771 Updated header documentation processed by Doxygen 2016-06-19 21:23:54 +01:00
6a53ed41ba Doxygen documentation: Standardized the 'See also' heading 2016-06-17 17:31:34 +01:00
de4c018b19 Doxygen documentation: Remove superfluous linebreak 2016-06-17 17:13:39 +01:00
787122c9c8 functionObjectList::list: Support recursion when listing functionObject configuration files 2016-06-16 13:02:17 +01:00
d9f423ec85 Utility sample: replaced by 'postProcess -func sample'
To re-use existing 'sampleDict' files simply add the following entries:

    type sets;
    libs ("libsampling.so");

and run

    postProcess -func sampleDict

It is probably better to also rename 'sampleDict' -> 'sample' and then run

    postProcess -func sampleDict
2016-06-13 14:27:46 +01:00
118a0f225d functionObjects: Completed transformation of 'source' to vol/surfaceRegion 2016-06-13 09:42:14 +01:00
ae1a6dd12d functionObjects: Simplified the handling of the post-processing mode
Replaced the 'postProcess' argument to the 'write' and 'execute'
functions with the single static member 'postProcess' in the
functionObject base-class.
2016-06-13 08:36:03 +01:00
18b632e71d Utilities patchAverage and patchIntegrate replaced by postProcess
e.g.
    postProcess -func 'patchAverage(name=inlet,p)'
    postProcess -func 'patchIntegrate(name=inlet,p)'
2016-06-12 22:32:15 +01:00
0f4df0150a functionObjects: 'valueOutput' -> 'writeFields' 2016-06-11 15:25:00 +01:00
4b5905e535 functionObjects::writeRegisteredObject -> functionObjects::writeObjects
Added configuration file etc/caseDicts/postProcessing/fields/writeObjects
2016-06-10 08:28:13 +01:00
6000ea217f postProcess: Added '-list' option to list the available configured functionObjects 2016-06-01 16:28:07 +01:00
1be464d23d functionObjectList::readFunctionObject: Add support for functionObject arguments containing '()'s 2016-05-31 17:47:21 +01:00
7454518bc5 includeFuncEntry: Added support for function arguments compatible with the '-func' post-processing option
e.g.

functions
{
    #includeFunc mag(U)
}

executes 'mag' on the field 'U' writing the field 'mag(U)'.

The equivalent post-processing command is

postProcess -func 'mag(U)'
2016-05-31 14:43:44 +01:00
e4dc50dcb0 postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
e5d75e9824 regionFunctionObject: Indent 'write' messages 2016-05-26 10:14:51 +01:00
ee462f8241 messageStream: Added 'Log' macro which outputs to 'Info' if 'log' is true
regionFunctionObject: moved 'log_' to public 'log' to support the 'Log' macro
2016-05-25 18:19:46 +01:00
1de91282cd regionFunctionObject: Moved the field/object maintenance functions from fvMeshFunctionObject into regionFunctionObject 2016-05-25 16:26:57 +01:00
bae742112f postProcess: catch missing field errors to process further time-directories 2016-05-25 15:39:37 +01:00
6ce303c79a functionObjects::regionFunctionObject: Added optional 'log' entry (defaults to true) 2016-05-24 09:03:41 +01:00
f73a8e6160 functionObjectList: Filter unnecessary warning from new 'libs' entry 2016-05-21 23:10:06 +01:00
447c850987 functionObjectList: Added support for 'libs' to load libraries for all functionObjects
e.g.

functions
{
    libs ("libfieldFunctionObjects.so");

    div
    {
        type            div;
        field           U;
        executeControl  writeTime;
        writeControl    writeTime;
    }

    Q
    {
        type            Q;
        executeControl  writeTime;
        writeControl    writeTime;
    }
}
2016-05-21 20:01:42 +01:00
7af20fd9db IOOutputFilter: Updated the signature of the 'write' function to correspond to the new functionObject 2016-05-18 23:09:26 +01:00
5af1a7e4f3 functionObjects::partialWrite: Redundant and removed
the equivalent functionality is provided by the writeRegisteredObject
   functionObject in a MUCH simpler, easier and extensible manner.

functionObject: Removed the now redundant 'timeSet' function.
2016-05-18 12:23:29 +01:00
2b501b7e85 timeControlFunctionObject: Updated the control logic in the 'end' function
to correspond to the new default behavior of the 'end' function in
functionObject which now calls 'execute' then 'write'.
2016-05-18 09:05:24 +01:00
195b73e0f7 functionObject: Call 'execute' then 'write' from the default 'end' function. 2016-05-17 22:56:47 +01:00
83bae2efd3 functionObjects: Renamed dictionary entry 'functionObjectLibs' -> 'libs'
This changes simplifies the specification of functionObjects in
controlDict and is consistent with the 'libs' option in controlDict to
load special solver libraries.

Support for the old 'functionObjectLibs' name is supported for backward compatibility.
2016-05-16 22:09:01 +01:00
fd38002d57 functionObjects: Added regionFunctionObject and fvMeshFunctionObject intermediate base-classes
to simplify writing common functionObjects and avoid unnecessary code duplication
2016-05-16 12:20:44 +01:00
78d2971b21 functionObjects: rewritten to all be derived from 'functionObject'
- Avoids the need for the 'OutputFilterFunctionObject' wrapper
  - Time-control for execution and writing is now provided by the
    'timeControlFunctionObject' which instantiates the processing
    'functionObject' and controls its operation.
  - Alternative time-control functionObjects can now be written and
    selected at run-time without the need to compile wrapped version of
    EVERY existing functionObject which would have been required in the
    old structure.
  - The separation of 'execute' and 'write' functions is now formalized in the
    'functionObject' base-class and all derived classes implement the
    two functions.
  - Unnecessary implementations of functions with appropriate defaults
    in the 'functionObject' base-class have been removed reducing
    clutter and simplifying implementation of new functionObjects.
  - The 'coded' 'functionObject' has also been updated, simplified and tested.
  - Further simplification is now possible by creating some general
    intermediate classes derived from 'functionObject'.
2016-05-15 16:40:01 +01:00
ded5f35dd6 functionObjects: Separated 'execute' and 'write' functions to simplify support for post-processing 2016-05-13 09:05:29 +01:00
6164c2f262 Standardized the naming of functions which control the writing of fields etc.
to have the prefix 'write' rather than 'output'

So outputTime() -> writeTime()

but 'outputTime()' is still supported for backward-compatibility.

Also removed the redundant secondary-writing functionality from Time
which has been superseded by the 'writeRegisteredObject' functionObject.
2016-05-12 17:38:01 +01:00
c983670c91 functionObjects: Changed options 'outputControl' -> 'writeControl' and 'outputInterval' -> 'writeInterval'
for consistency with the time controls in controlDict and to avoid
unnecessary confusion.  All code and tutorials have been updated.

The old names 'outputControl' and 'outputInterval' are but supported for
backward compatibility but deprecated.
2016-05-12 11:38:11 +01:00
cacbc688d8 Doxygen documentation: Use C++-style comments for enumeration elements 2016-05-11 23:10:42 +01:00
84f6355ad0 OutputFilterFunctionObject: Removed support for "dictionary" option
Superseded by the more general #include dictionary directive.
2016-05-11 23:08:48 +01:00
acdfa68116 OutputFilterFunctionObject: Simplify construction 2016-05-11 14:40:55 +01:00
437030a57d functionObjects: Removed the redundant "viable" member function
Construction failure and recovery is not handled with exceptions in functionObjectList
2016-05-11 12:57:17 +01:00
82151962c5 functionObjects: Removed redundant "start()" member function 2016-05-11 10:20:39 +01:00
862d963a95 functionObjectList: Print the messages from errors caught during functionObject construction
Exit on FatalIOError
2016-05-11 10:19:07 +01:00
32dbb01e96 functionObjectList: Rationalized and simplified the handling of disabled functionObjects
Simplified and generalized the handling of functionObjects which fail to
construct by removing them from the list rather than maintaining an
"enabled" switch in each functionObject.
2016-05-11 09:03:52 +01:00
5469e21fe2 execFlowFunctionObjects: Replaced with script providing instructions to use the '-postProcess' option 2016-05-09 17:02:00 +01:00
364044243a applications/solvers/combustion: Added -postProcess option
See also commit cc455173ff
2016-05-09 14:51:21 +01:00
7dca6b6a21 applications/solvers: Added -postProcess option
See also commit cc455173ff
2016-05-09 14:08:15 +01:00
38916e66bb applications/solvers/multiphase: Added -postProcess option
See also commit cc455173ff
2016-05-08 20:57:08 +01:00
cc455173ff simpleFoam: Added experimental "-postProcess" option
Executes application functionObjects to post-process existing results.

    If the "dict" argument is specified the functionObjectList is constructed
    from that dictionary otherwise the functionObjectList is constructed from
    the "functions" sub-dictionary of "system/controlDict"

    Multiple time-steps may be processed and the standard utility time
    controls are provided.

This functionality is equivalent to execFlowFunctionObjects but in a
more efficient and general manner and will be included in all the
OpenFOAM solvers if it proves effective and maintainable.

The command-line options available with the "-postProcess" option may be
obtained by

simpleFoam -help -postProcess

Usage: simpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

Henry G. Weller
CFD Direct Ltd.
2016-05-08 09:33:46 +01:00
8bc3d5e4fb functionObjects: Renamed option "adjustableTime" -> "adjustableRunTime" for consistency with Time 2016-05-07 09:32:00 +01:00
4281d14eb1 functionObjects: Updated documentation 2016-05-04 21:01:22 +01:00
891b2a0f8b functionObjects: Moved functionObjects namespace documentation into functionObject.H 2016-05-04 13:56:36 +01:00
0534a225fd functionObjects: Moved into the functionObjects namespace and rationalized and simplified failable construction
Rather than requiring each functionObject to handle failed construction
internally (using the active_ flag) the static member function "viable"
is provided which returns true if construction of the functionObject is
likely to be successful.  Failed construction is then handled by the
wrapper-class which constructs the functionObject,
e.g. "OutputFilterFunctionObject".
2016-05-02 16:28:24 +01:00
67e2d02800 functionObjectFile: Separated into functionObjectFile and functionObjectFiles
functionObjectFile provides basic directory, file and formatting functions
functionObjectFiles provides multi-file cache
2016-04-30 09:18:42 +01:00