Commit Graph

2858 Commits

Author SHA1 Message Date
b9313ef2fe ENH: Consistency updates after Foundation merge and code tidying 2016-04-25 16:46:56 +01:00
fd9d801e2d GIT: Initial commit after latest foundation merge 2016-04-25 11:40:48 +01:00
69ae5a9a78 GIT: Resolve merge conflict 2016-04-22 13:31:37 +01:00
a592347b91 BUG: functionObjectState required update when accessed via execFlowFunctionObjects- fixes #54 2016-04-22 13:01:21 +01:00
870d75c2d3 dictionary: Corrected topDict()
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2060
2016-04-21 21:08:56 +01:00
9d0f4997d3 Tensor, SymmTensor: Simplified invariantII
Now the calculation of the 2nd-invariant is more efficient and
accumulates less round-off error.
2016-04-21 21:07:39 +01:00
e7ef7ed4e6 src/OpenFOAM/primitives: inherit operator=(const Foam::zero) from base class where appropriate 2016-04-17 21:02:57 +01:00
0ea229ccc8 PtrListIO: Indent list elements on output.
Particularly useful for lists of dictionaries.
2016-04-17 15:45:29 +01:00
2e990f19d8 Updated references
See also http://www.openfoam.org/mantisbt/view.php?id=2036
2016-04-17 15:29:51 +01:00
8c6fa81eba vector::zero -> Zero 2016-04-16 18:34:41 +01:00
75c7b7b239 quaternion/septernion: Added multi- quaternion/septernion averaging
Using method based on
http://ntrs.nasa.gov/archive/nasa/casi.ntrs.nasa.gov/20070017872.pdf
but simplified for the case where the quaternions are similar.
2016-04-16 15:59:05 +01:00
683cfb9d97 vector::zero -> Zero 2016-04-15 11:32:42 +01:00
23a8779379 septernion: Changed definition of the forward transformation for consistency with spatialTransform
inline Foam::vector Foam::septernion::transformPoint(const vector& v) const
{
    return r().transform(v - t());
}

Now there is a 1:1 correspondence between septernion and
spatialTransform and a septernion constructor from spatialTransform
provided.

Additionally "septernion::transform" has been renamed
"septernion::transformPoint" to clarify that it transforms coordinate
points rather than displacements or other relative vectors.
2016-04-15 11:27:18 +01:00
2d2ecf91dc quaternion: Added static member function to return a unit quaternion constructed from a vector
//- Return the unit quaternion (versor) from the given vector
    //  (w = sqrt(1 - |sqr(v)|))
    static inline quaternion unit(const vector& v);
2016-04-12 21:43:03 +01:00
6af11bfa02 spatialTransform: Added the "&&" operator to transform positions 2016-04-10 23:06:35 +01:00
0c7ce8938b rigidBodyDynamics: Added dictionary-based IO of the rigidBodyModel 2016-04-07 21:47:08 +01:00
9b7521ae0a List: Remove the inherited UList::shallowCopy to avoid accidental misuse 2016-04-07 21:05:26 +01:00
52782da917 VectorI: Added dummy innerProduct for scalar
to allow the construction of vtables for virtual member functions
involving the inner-products of fields for which a "NotImplemented"
specialization for scalar is provided.
2016-04-06 14:22:33 +01:00
a8f5b45973 Updated headers 2016-04-06 14:22:24 +01:00
596bd8ba45 geometricOneField: Enhanced to provide better correspondence to GeometricField 2016-04-06 14:21:04 +01:00
6e573ad7e8 UList: Rationalize assignment (shallow-copy vs deep-copy)
//- Disallow default shallow-copy assignment
    //
    //  Assignment of UList<T> may need to be either shallow (copy pointer)
    //  or deep (copy elements) depending on context or the particular type
    //  of list derived from UList and it is confusing and prone to error
    //  for the default assignment to be either.  The solution is to
    //  disallow default assignment and provide separate 'shallowCopy' and
    //  'deepCopy' member functions.
    void operator=(const UList<T>&) = delete;

    //- Copy the pointer held by the given UList.
    inline void shallowCopy(const UList<T>&);

    //- Copy elements of the given UList.
    void deepCopy(const UList<T>&);
2016-04-03 10:26:05 +01:00
88bd912374 Pstream: optimisation of data exchange
Contributed by Mattijs Janssens.

1. Any non-blocking data exchange needs to know in advance the sizes to
   receive so it can size the buffer.  For "halo" exchanges this is not
   a problem since the sizes are known in advance but or all other data
   exchanges these sizes need to be exchanged in advance.

   This was previously done by having all processors send the sizes of data to
   send to the master and send it back such that all processors
   - had the same information
   - all could work out who was sending what to where and hence what needed to
     be received.

   This is now changed such that we only send the size to the
   destination processor (instead of to all as previously). This means
   that
   - the list of sizes to send is now of size nProcs v.s. nProcs*nProcs before
   - we cut out the route to the master and back by using a native MPI
     call

   It causes a small change to the API of exchange and PstreamBuffers -
   they now return the sizes of the local buffers only (a labelList) and
   not the sizes of the buffers on all processors (labelListList)

2. Reversing the order of the way in which the sending is done when
   scattering information from the master processor to the other
   processors. This is done in a tree like fashion. Each processor has a
   set of processors to receive from/ send to. When receiving it will
   first receive from the processors with the least amount of
   sub-processors (i.e. the ones which return first). When sending it
   needs to do the opposite: start sending to the processor with the
   most amount of sub-tree since this is the critical path.
2016-04-02 18:32:11 +01:00
8cd7097be1 spatialTransformI.H: Corrected doc 2016-04-01 14:53:23 +01:00
f1ecdd77e6 Field: Add block member function to return sub-sets of the field as VectorSpaces 2016-03-30 18:17:51 +01:00
6e5b35bb69 spatialTransform: Include spatialTensor.H 2016-03-30 18:17:27 +01:00
a6901dd007 MatrixSpace: Add support for block conversion into VectorSpace 2016-03-30 18:16:47 +01:00
f77e26c5b9 MatrixSpace: Corrected typo 2016-03-30 18:16:20 +01:00
b7924a57d5 SubField: Removed temporary Info statement 2016-03-25 22:43:40 +00:00
04dcee7680 RectangularMatrix: Removed the identity function (now in SquareMatrix) 2016-03-25 22:35:03 +00:00
c05686d9bc Identity: Make cast-to-primitive operators explicit
to avoid operator resolution ambiguities when compiling single-precision
2016-03-24 23:04:53 +00:00
9f7ecd5453 LLTMatrix: Updated docs 2016-03-24 23:04:40 +00:00
b5f6e5d42a Update header 2016-03-24 19:13:36 +00:00
d4046bb85e LLTMatrix, LUscalarMatrix, QRMatrix: Provided consistent 'solve' interface 2016-03-24 19:13:04 +00:00
f019d1e738 LLTMatrix, LUscalarMatrix, QRMatrix: Provided consistent construction, decomposition and solution interface 2016-03-24 18:05:18 +00:00
e9199c6e14 QRMatrix: New class to provide QR-decomposition by Householder reflection
This development is sponsored by Carnegie Wave Energy Ltd.
2016-03-24 14:49:25 +00:00
9bbf09573b SquareMatrix: Add setSize and assignment to identity 2016-03-24 14:48:59 +00:00
0ce3586094 Matrix: correct docs 2016-03-24 14:48:28 +00:00
1fdcefb464 LLTMatrix: Add support for updating the decomposition from a new matrix 2016-03-24 14:47:41 +00:00
1ec47384bb src/OpenFOAM/matrices: Reformatted for-loops consistently 2016-03-23 18:27:04 +00:00
a08adf25de LUscalarMatrix: Updated code layout 2016-03-23 15:34:19 +00:00
0945cfd35f LLTMatrix: New matrix form to support Cholesky decomposition
of symmetric positive-definite matrices and the solution of associated
linear systems.
2016-03-23 15:33:03 +00:00
ecc608d1c5 SquareMatrix, RectangularMatrix: Updated block handling
Added 'typeOfInnerProduct' support to ensure the correct type is
returned from the matrix product operator.
2016-03-23 12:52:35 +00:00
878866b16e MatrixBlock: Separate Matrix::Block into the separate class MatrixBlock
This avoids serious problems with template parameter deduction when
manipulating blocks of different matrix types e.g. Square and
Rectangular.
2016-03-23 12:50:34 +00:00
cfd939d4f2 Matrices: Rename private member 'nRows_' -> 'mRows_' for consistency with access member function 'm()' 2016-03-23 12:49:03 +00:00
cb65ba71d7 Made all template declarations consistent using 'class' rather than 'typename' 2016-03-22 15:02:55 +00:00
caf8776f9b SquareMatrix, SymmetricSquareMatrix: Changed the constructor from size to require only n
This avoids the need to check that the m and n dimensions are the same.
2016-03-22 14:13:48 +00:00
082261439c Identity: Added conversion to label 2016-03-22 14:12:53 +00:00
c7e17fa6c2 RectangularMatrix: Added construction from and assignment to zero
Also added the Field outer-product operator returning a RectangularMatrix
2016-03-22 14:11:41 +00:00
961dc048da Matrix: Added support for extracting and assigning blocks
The blocks may be specified directly in terms of the size and location in the
parent matrix or with the size obtained from a template specified
VectorSpace or MatrixSpace type.
2016-03-22 14:09:24 +00:00
27ec0178dc Updated header 2016-03-22 14:09:04 +00:00