Commit Graph

1538 Commits

Author SHA1 Message Date
3dffee8a6a STYLE: change MeshedSurface 'faces' access to 'surfFaces' (related to issue #104)
- use surfFaces() to return the templated list of faces.
  This frees up the method 'faces()' to be used as a virtual method,
  which will be needed at a later stage.
2016-08-10 10:03:51 +02:00
6be5816815 STYLE: snappyHexMeshDict: duplicate information. Fixes #286. 2016-11-09 09:23:46 +00:00
b475ae851e DEFEATURE: remove samm, pro-am, prostar3 convertors (issue #204)
- these frontends are defunct and their formats were quite a mess.
  Prostar 4 versions (star4ToFoam, foamToStarMesh) should be used
  instead.
2016-08-05 11:05:30 +02:00
c5e364dd38 STYLE: Remove meshReaders/meshWriters namespace (issue #204)
- Relocate classes (STARCDMeshReader, STARCDMeshWriter)
  into fileFormats namespace instead.
2016-08-05 12:00:00 +02:00
3e0e4532fd STYLE: minor adjustments to doxygen comments 2016-10-04 09:16:08 +02:00
182f0a72ae MRG: Incremental foundation merge 2016-10-03 08:27:06 +01:00
22a7a70256 Merge remote-tracking branch 'origin/merge-foundation' into adjust-config-foundation-merge 2016-09-30 17:50:20 +02:00
839f14afcd ENH: Code clean-up 2016-09-30 12:30:02 +01:00
bd0e982d99 MRG: Initial commit after latest Foundation merge 2016-09-30 11:16:28 +01:00
3c86995198 COMP: remove boost/mpfr/gmp linkage for foamyMesh components.
- CGAL itself includes its library dependencies, we only need to
  provide the -L... option to the proper ThirdParty locations.

  Should help improve general build robustness.
2016-09-30 17:00:05 +02:00
84683b5f90 CONFIG: remove foundation use of FOAMY_HEX_MESH control.
- instead we use the CGAL settings directly since they have the
  same option of (version | system | none)

- may wish to review this again in the future.
2016-09-29 12:36:27 +02:00
1fbcb686ff STYLE: Consistency updates 2016-09-23 16:52:46 +01:00
b9940cbbb1 COMP: Multiple changes - first clean build after latest merge - UNTESTED 2016-09-23 15:36:53 +01:00
9fbd612672 GIT: Initial state after latest Foundation merge 2016-09-20 14:49:08 +01:00
aa30d0e7d5 checkMesh: Added option to write sets
- the checking for point-connected multiple-regions now also writes the
    conflicting points to a pointSet
  - with the -writeSets option it now also reconstructs & writes pointSets
2016-07-22 16:53:49 +01:00
ab84d6941f Updated template formatting to C++11 2016-07-12 20:03:29 +01:00
08bd802b42 checkGeometry, moveDynamicMesh: Convert processor IDs to 'List<label>'
Resolves bug-report http://bugs.openfoam.org/view.php?id=2140
2016-07-09 20:47:06 +01:00
9e1486fee5 checkMesh, moveDynamicMesh: option -checkAMI writes the reconstructed AMI weights
Patch contributed by Mattijs Janssens
2016-07-05 15:35:16 +01:00
579f559aa7 Correct handling of the CGAL version variable for makeCGAL in ThirdParty 2016-07-01 16:22:28 +01:00
f768402255 Simplified the handling of the CGAL installation 2016-07-01 14:53:28 +01:00
dea6a3c6e8 wmake/Allwmake: Completed support for targetType 'objects'
Patch contributed by Mattijs Janssens
2016-06-24 15:25:11 +01:00
6b6a73d9b2 applications/utilities/mesh/generation/Allwmake: Build foamyHexMesh if FOAMY_HEX_MESH is set 2016-06-24 08:48:29 +01:00
96a038f281 foamyMesh: Simplify support for system CGAL installation 2016-06-21 19:47:46 +01:00
3990302a54 Updated and simplified the Doxygen documentation 2016-06-20 21:20:28 +01:00
d04ea965e2 Update headers 2016-06-20 09:39:47 +01:00
b16756115a Remove/replace deprecated functions and classes 2016-06-20 09:39:02 +01:00
6a53ed41ba Doxygen documentation: Standardized the 'See also' heading 2016-06-17 17:31:34 +01:00
1319df48d9 Rationalized Doxygen documentation of command-line options 2016-06-17 09:11:58 +01:00
e2336fefd3 checkMesh: Added writing of faceSets and cellSets containing errors
In parallel the sets are reconstructed. e.g.

mpirun -np 6 checkMesh -parallel -allGeometry -allTopology -writeSets vtk

will create a postProcessing/ folder with the vtk files of the
(reconstructed) faceSets and cellSets.

Also improved analysis of disconnected regions now also checks for point
connectivity with is useful for detecting if AMI regions have duplicate
points.

Patch contributed by Mattijs Janssens
2016-06-12 20:51:07 +01:00
f5ed8e777a autoRefineMesh: corrected source file and executable names 2016-06-10 14:05:30 +01:00
0aa4d70b9d applications/utilities: FOAM_USER_APPBIN -> FOAM_APPBIN 2016-06-10 10:35:57 +01:00
1a9112e1b2 CONFIG: rename config file to avoid premature filtering of its name 2016-07-06 08:11:42 +02:00
1be96a546c Added forward declaration of friend functions 2016-05-30 13:21:29 +01:00
d438da1eb7 ACMI: Corrected conservation issue
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2057
2016-05-30 08:29:11 +01:00
3f608e95e6 Added forward declaration of friend functions 2016-05-30 08:28:35 +01:00
35dba48db1 createBaffles: filter zero-sized patches
Resolves patch request http://bugs.openfoam.org/view.php?id=2103
Patch contributed by Mattijs Janssens
2016-05-29 22:51:15 +01:00
67de20df25 Further standardization of loop index naming: pointI -> pointi, patchI -> patchi 2016-05-18 21:20:42 +01:00
ce0cd35185 Patches contributed by Mattijs Janssens:
splitMeshRegions: handle flipping of faces for surface fields

subsetMesh: subset dimensionedFields

decomposePar: use run-time selection of decomposition constraints. Used to
    keep cells on particular processors. See the decomposeParDict in

$FOAM_UTILITIES/parallel/decomposePar:
  - preserveBaffles: keep baffle faces on same processor
  - preserveFaceZones: keep faceZones owner and neighbour on same processor
  - preservePatches: keep owner and neighbour on same processor. Note: not
    suitable for cyclicAMI since these are not coupled on the patch level
  - singleProcessorFaceSets: keep complete faceSet on a single processor
  - refinementHistory: keep cells originating from a single cell on the
    same processor.

decomposePar: clean up decomposition of refinement data from snappyHexMesh

reconstructPar: reconstruct refinement data (refineHexMesh, snappyHexMesh)

reconstructParMesh: reconstruct refinement data (refineHexMesh, snappyHexMesh)

redistributePar:
  - corrected mapping surfaceFields
  - adding processor patches in order consistent with decomposePar

argList: check that slaves are running same version as master

fvMeshSubset: move to dynamicMesh library

fvMeshDistribute:
  - support for mapping dimensionedFields
  - corrected mapping of surfaceFields

parallel routines: allow parallel running on single processor

Field: support for
  - distributed mapping
  - mapping with flipping

mapDistribute: support for flipping

AMIInterpolation: avoid constructing localPoints
2016-05-15 16:36:48 +01:00
274d1df8a4 snappyHexMesh: Automatically remove zero-sized patches
All patches are preserved if the 'keepPatches' option is set true.
Patch contributed by Mattijs Janssens
2016-05-13 17:47:38 +01:00
bd52e35f77 checkMesh: Updated the closed-ness test for ACMI to use FV
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2088
2016-05-13 16:23:02 +01:00
6164c2f262 Standardized the naming of functions which control the writing of fields etc.
to have the prefix 'write' rather than 'output'

So outputTime() -> writeTime()

but 'outputTime()' is still supported for backward-compatibility.

Also removed the redundant secondary-writing functionality from Time
which has been superseded by the 'writeRegisteredObject' functionObject.
2016-05-12 17:38:01 +01:00
81f31acbb3 Updated headers 2016-04-30 21:53:19 +01:00
3c053c2fe6 GeometricField: Renamed internalField() -> primitiveField() and dimensionedInternalField() -> internalField()
These new names are more consistent and logical because:

primitiveField():
primitiveFieldRef():
    Provides low-level access to the Field<Type> (primitive field)
    without dimension or mesh-consistency checking.  This should only be
    used in the low-level functions where dimensional consistency is
    ensured by careful programming and computational efficiency is
    paramount.

internalField():
internalFieldRef():
    Provides access to the DimensionedField<Type, GeoMesh> of values on
    the internal mesh-type for which the GeometricField is defined and
    supports dimension and checking and mesh-consistency checking.
2016-04-30 21:40:09 +01:00
5df2b96489 GeometricField::internalField() -> GeometricField::internalFieldRef()
Non-const access to the internal field now obtained from a specifically
named access function consistent with the new names for non-canst access
to the boundary field boundaryFieldRef() and dimensioned internal field
dimensionedInternalFieldRef().

See also commit 22f4ad32b1
2016-04-30 14:25:21 +01:00
ea5401c770 GeometricField::GeometricBoundaryField -> GeometricField::Boundary
When the GeometricBoundaryField template class was originally written it
was a separate class in the Foam namespace rather than a sub-class of
GeometricField as it is now.  Without loss of clarity and simplifying
code which access the boundary field of GeometricFields it is better
that GeometricBoundaryField be renamed Boundary for consistency with the
new naming convention for the type of the dimensioned internal field:
Internal, see commit 4a57b9be2e

This is a very simple text substitution change which can be applied to
any code which compiles with the OpenFOAM-dev libraries.
2016-04-28 07:22:02 +01:00
4a57b9be2e GeometricField: Rationalized and simplified access to the dimensioned internal field
Given that the type of the dimensioned internal field is encapsulated in
the GeometricField class the name need not include "Field"; the type
name is "Internal" so

volScalarField::DimensionedInternalField -> volScalarField::Internal

In addition to the ".dimensionedInternalField()" access function the
simpler "()" de-reference operator is also provided to greatly simplify
FV equation source term expressions which need not evaluate boundary
conditions.  To demonstrate this kEpsilon.C has been updated to use
dimensioned internal field expressions in the k and epsilon equation
source terms.
2016-04-27 21:32:45 +01:00
450728ea84 Standardized cell, patch, face and processor loop index names 2016-04-25 12:00:53 +01:00
43beb06018 Standardized cell, patch and face loop index names 2016-04-25 10:28:32 +01:00
2d5ff31649 boundaryField() -> boundaryFieldRef() 2016-04-24 22:07:37 +01:00
5f13806591 Updated headers 2016-04-21 21:07:28 +01:00