Commit Graph

440 Commits

Author SHA1 Message Date
89f2cda3ab ENH: mpi: use per-application communicator. 2020-12-09 15:17:44 +00:00
6e3bc1f7d0 STYLE: can add compile-time deprecated message for autoPtr::set()
- deprecated Feb-2018, but not marked as such.

  The set() method originally enforce an additional run-time check
  (Fatal if pointer was already set), but this was rarely used.
  In fact, the set() method was invariably used in constructors
  where the pointer by definition was unset.

  Can now mark as deprecated to catch the last of these.
  We prefer reset() for similarity with std::unique_ptr

  Eg,
  FOAM_EXTRA_CXXFLAGS="-DFoam_autoPtr_deprecate_setMethod"  wmake
2020-11-19 16:57:45 +01:00
c91fc6f41c CONFIG: rationalize mpi config tuning (#1910)
- prefix FOAM_MPI and library directories with 'sys-' for system
  versions for uniform identication.

  WM_MPLIB      | libdir (FOAM_MPI)  | old naming |
  SYSTEMMPI     | sys-mpi            | mpi        |
  SYSTEMOPENMPI | sys-openmpi        | openmpi-system |

- prefix preferences with 'prefs.' to make them more easily
  identifiable, and update bin/tools/create-mpi-config accordingly

      Old name: config.{csh,sh}/openmpi
      New name: config.{csh,sh}/prefs.openmpi

- additional mpi preferences now available:
    * prefs.intelmpi
    * prefs.mpich
    ...

CONFIG: added hook for EASYBUILDMPI (eb-mpi), somewhat like USERMPI

- EasyBuild uses mpicc when compiling, so no explicit wmake rules are
  used

ENH: support different major versions for system openmpi

- for example, with

     WM_MPLIB=SYSTEMOPENMPI2

  defines FOAM_MPI=sys-openmpi2 and thus creates lib/sys-openmpi2

ENH: centralize handling of mpi as 'mpi-rules'

    Before:
        sinclude $(GENERAL_RULES)/mplib$(WM_MPLIB)
        sinclude $(DEFAULT_RULES)/mplib$(WM_MPLIB)

        ifeq (,$(FOAM_MPI_LIBBIN))
            FOAM_MPI_LIBBIN := $(FOAM_LIBBIN)/$(FOAM_MPI)
        endif

    After:
        include $(GENERAL_RULES)/mpi-rules

- also allows variants such as SYSTEMOPENMPI2 to be handled separately
2020-11-11 18:36:01 +01:00
9c7aa9727a ENH: add UPstream::parRun(const bool)
- slightly neater code when disabling/restoring parallel state

  New
      const bool oldParRun = Pstream::parRun(false);
      ...
      Pstream::parRun(oldParRun);

  Old
      const bool oldParRun = Pstream::parRun();
      Pstream::parRun() = false;
      ...
      Pstream::parRun() = oldParRun;
2020-10-12 12:51:22 +02:00
5dc5ea928a ENH: add UPstream::subProcs() static method
- returns a range of `int` values that can be iterated across.
  For example,

      for (const int proci : Pstream::subProcs()) { ... }

  instead of

      for
      (
          int proci = Pstream::firstSlave();
          proci <= Pstream::lastSlave();
          ++proci
      )
      {
          ...
      }
2020-09-28 14:26:07 +02:00
e18ff114a6 ENH: add UPstream::allProcs() method
- returns a range of `int` values that can be iterated across.
  For example,

      for (const int proci : Pstream::allProcs()) { ... }

  instead of

      for (label proci = 0; proci < Pstream::nProcs(); ++proci) { ... }
2020-09-28 14:25:59 +02:00
9423d2bd83 CONFIG: improve support for compiler/link options (#1830)
- introduce WM_COMPILE_CONTROL variable to convey control information
  into the build rules.

  The convention (as per spack):
      - '+' to select a feature
      - '~' to deselect a feature

  Eg, to select the gold linker, and disable openmp
  (spaces are not required):

      WM_COMPILE_CONTROL="+gold ~openmp"

CONFIG: accept FOAM_EXTRA_LDFLAGS for AMD, gold, Mingw linkers

CONFIG: generalize PROJECT_LIBS (-ldl used almost universally)
2020-09-07 09:45:51 +02:00
1c71c7cb23 Merge remote-tracking branch 'origin/master' into develop 2020-09-03 12:04:45 +02:00
4735776246 COMP: pass shell args for Allwmake-mpi (#1824) 2020-09-03 10:15:12 +02:00
12c91b9472 STYLE: check autoPtr as plain bool instead of valid()
- cleaner code, more similarity with unique_ptr

  Now
      if (ptr)
      if (!ptr)

  instead
      if (ptr.valid())
      if (!ptr.valid())
2020-07-16 11:39:24 +02:00
934d0bd743 ENH: support FOAM_MODULE_PREFIX to guide location of module builds (#1721)
- When compiling additional modules or user code, we need more control
  for the installation locations beyond the usual FOAM_USER_LIBBIN,
  FOAM_SITE_LIBBIN, FOAM_LIBBIN, and wish to have these values be
  modifiable without editing files.

- provide wmake rules for handling standard defaults:
    * GENERAL_RULES/module-path-user
    * GENERAL_RULES/module-path-group
    * GENERAL_RULES/module-path-project
  which are incorporated as follows:

  Make/options:
      include $(GENERAL_RULES)/module-path-user

  Make/files:
      LIB = $(FOAM_MODULE_LIBBIN)/libMyLibrary

  By default these would compile into FOAM_USER_{APPBIN,LIBBIN} but
  could be adjusted at compilation time. For example,

```
wmake -module-prefix=/path/my-install-location
```
Or
```
./Allwmake -module-prefix=/path/my-install-location
./Allwmake -prefix=/path/my-install-location
```
Or
```
FOAM_MODULE_PREFIX=/path/my-install-location ./Allwmake
```

ENH: add -no-recursion option for AllwmakeParseArguments

- more descriptive naming than the -fromWmake option (still supported)

- remove wmake/scripts/wmake.{cmake,wmake}-args since the -prefix
  handling and -no-recursion is now directly handled by AllwmakeParseArguments
2020-06-08 13:51:26 +02:00
3e43edf056 ENH: unify use of dictionary method names
- previously introduced `getOrDefault` as a dictionary _get_ method,
  now complete the transition and use it everywhere instead of
  `lookupOrDefault`. This avoids mixed usage of the two methods that
  are identical in behaviour, makes for shorter names, and promotes
  the distinction between "lookup" access (ie, return a token stream,
  locate and return an entry) and "get" access (ie, the above with
  conversion to concrete types such as scalar, label etc).
2020-06-02 17:26:03 +02:00
f233595a7f ENH: improved granularity for MPI-rebuilds
- Provide Allwmake-mpi scripts for handling the MPI-only build segment.

- Adjust Make/options to support a FOAM_MPI_LIBBIN target location.
  This will simply default to FOAM_LIBBIN/FOAM_MPI, but allows different
  types of builds with out-of-tree targets.

Example,

Build OpenFOAM with default MPI settings (eg, system openmpi)
```
./Allwmake
```

Rebuild MPI-layers with different MPI.

For any given and known type
```
othermpi()
{
    export WM_MPLIB=OPENMPI
    export FOAM_MPI=openmpi-3.1.3

    export OPAL_PREFIX=$WM_THIRD_PARTY_DIR/platforms/$WM_ARCH$WM_COMPILER/$FOAM_MPI
    export MPI_ARCH_PATH="$OPAL_PREFIX"
}
```

May wish to build/rebuild ptscotch
```
(
    othermpi
    $WM_THIRD_PARTY_DIR/makeSCOTCH
)
```

Rebuild the mpi-dependent parts. Can also provide install location
```
for script in $(find src -name Allwmake-mpi)
do
(
    other_mpi
    export FOAM_MPI_LIBBIN="$HOME/tmp/install-prefix/lib/$FOAM_MPI"
)
done
```
2020-05-19 07:13:12 +01:00
d4e31093fd ENH: improved encapsulation of MPI (re)builds
- dependency handling relocated from cmakeFunctions to wmakeFunctions
  and reused for mpi-versioned builds. This allows more checks for
  configuration parameters and removes hard-code build path
  information.

CONFIG: remove spurious mplibHPMPI entries

CONFIG: remove ADIOS1 rules (antiquated)
2020-05-12 10:05:47 +02:00
8cfb483054 STYLE: some general spelling fixes 2020-05-04 09:15:21 +02:00
a1ccd1b716 STYLE: use DebugInFunction macro 2020-05-01 16:11:18 +02:00
cc7af66a15 STYLE: use face_type instead of FaceType typedef 2020-04-28 15:38:47 +02:00
c3571b7357 ENH: topoDistanceData: templated on passive data type.
Also adds pointTopoDistance, edgeTopoDistance.
2020-04-24 12:34:08 +01:00
431c9632f9 ENH: add IOobject-based constructors for meshed surfaces (#1600)
- refactor logic from triSurfaceMesh for triSurface, MeshedSurface,
  UnsortedMeshedSurface.

  Makes it easier to locate and use surface files without the
  triSurfaceMesh (meshTools) infrastructure.

STYLE: remove unused sampledTriSurfaceMesh constructors
2020-03-12 16:20:56 +01:00
42299dca22 ENH: use IOstreamOption for writeObject() calls.
- reduces the number of parameters that are being passed around
  and allows future additions into the IOstreamOption with mininal
  effort.
2020-02-19 09:25:33 +00:00
4307e1719f STYLE: adjust names, locations for fileFormats
- renamed 'core/' -> 'base/' to avoid gitignore masking when re-adding
  files

- rename 'nas/' to 'nastran/' for more clarity

- relocated OBJstream from surfMesh to fileFormats

STYLE: remove unused parseNASCoord. Was deprecated 2017-09
2020-02-18 13:51:20 +01:00
4fea7b3bb4 BUG: SPDP: PrecisionAdaptor copies input list. Fixes #1590. 2020-02-12 17:27:41 +00:00
d483123cef STYLE: limit foamEtcFile -show-api to querying the META-INFO/api-info
- simplifies code, covers most cases.
  Can use wmake -show-api or wmakeBuildInfo to query the make rules.

STYLE: Allwmake script adjustments

- use bin/foamEtcFile instead of relying on PATH.
  The make environment may not have the OpenFOAM bin/ in it.

- simpler shell syntax
2020-02-12 17:48:09 +01:00
1a16207e0d COMP: compilation of Test-QRMatrix (clang, int64)
- remove unused local functions from volumeExprDriver
2019-12-16 11:22:15 +01:00
98467036b3 STYLE: regularize quoting and exit on failed 'cd' 2019-11-13 13:19:16 +01:00
ec7e3c88e4 ENH: test for WM_PROJECT_DIR being set/unset in scripts 2019-11-06 09:18:51 +01:00
fdf8d10ab4 Merge commit 'e9219558d7' into develop-v1906 2019-12-05 11:47:19 +00:00
e9219558d7 GIT: Header file updates 2019-10-31 14:48:44 +00:00
fd4ffc8a27 ENH: use PrecisionAdaptor in kahipDecomp 2019-10-29 11:42:55 +01:00
328513fcaa ENH: use List instead of UList for internal decomposition implementation
- enables future use of precision adaptors
2019-10-29 10:46:33 +01:00
a3f3ec81f8 BUG: randomDecomp: added non-mesh decomposition. Fixes #1428. 2019-09-05 14:25:15 +01:00
1d79c0452c ENH: additional contiguous traits (#1378)
- change contiguous from a series of global functions to separate
  templated traits classes:

    - is_contiguous
    - is_contiguous_label
    - is_contiguous_scalar

  The static constexpr 'value' and a constexpr conversion operator
  allow use in template expressions.  The change also makes it much
  easier to define general traits and to inherit from them.

  The is_contiguous_label and is_contiguous_scalar are special traits
  for handling data of homogeneous components of the respective types.
2019-07-29 11:36:30 +02:00
3c07a1bb6f ENH: Foam::name() of memory address
- returns the memory address formatted in hexadecimal, which can be
  useful for detailed information
2019-08-12 10:46:29 +02:00
f94be1bebb ENH: use FatalIOErrorInLookup instead of FatalErrorInLookup 2019-07-16 10:26:51 +02:00
fb09f56aba ENH: use FatalErrorInLookup macros (#1362) 2019-07-12 18:00:00 +02:00
53947016fa BUG: metis PrecisionAdaptor used ref() instead of constCast() - closes #1354
- the scotch interface still uses non-const pointers when passing in
  values. For the ConstPrecisionAdaptor this means that we need to cheat
  with a constCast(). Using ref() will rightly trigger complaints about
  trying to modify a const object.
2019-07-04 17:07:48 +02:00
355d6c4c4f ENH: scotch: make repeatable. Fixes #1274. 2019-06-19 08:45:48 +01:00
ed10b19a2c COMP: randomDecomp - resolved compiler warnings 2019-06-14 17:01:30 +01:00
f1394e9ce3 STYLE: use data() instead of begin() when passing metisDecomp raw data 2019-06-14 11:08:31 +02:00
01ea3cc790 ENH: metis: use PrecisionAdaptor to support 64 bit indices 2019-06-13 20:52:48 +01:00
b5d775a691 STYLE: avoid deprecated lookup methods 2019-05-22 15:06:12 +01:00
8345452484 STYLE: additional constructor for randomDecomp 2019-05-20 08:58:35 +01:00
51f501b668 ENH: decomposition: added 'random' method for testing.
This will use a random-number generator to select for
each cell the processor. Useful for testing parallel/non-parallel
consistent behaviour.
2019-05-08 12:27:24 +01:00
659526101a ENH: Adding reflection capability to solar load radiation model
ENH: Several modifycations to avoid erroneuos rays to be shot
from wrong faces.

ENH: Updating tutorials and avoiding registration of the
coarse singleCellFvMesh

Adding solarLoad tutorial case simpleCarSolarPanel

ENH: Changes needed for the merge
2019-01-21 16:29:58 -08:00
9893e62386 ENH:
Adding reflecting fluxes to Solar load radiation model.
Adding functionality to the boundary radiation models and new
place holder for basic wall types such as transparent, opaqueDiffusive,
opaqueReflective,etc.
Changing radiation wall models to run time selectable.
Adding multi-band capabilities to VF model and improving the set up
for using solar loads in VF and fvDOM radiation models.
2018-12-03 13:51:40 -08:00
e7a046858e COMP: avoid some implicit linkage (#1238) 2019-04-30 11:28:23 +02:00
beefee48d4 COMP: adjust compilation order with updated interdependencies
- Eg, with surface writers now in surfMesh, there are fewer libraries
  depending on conversion and sampling.

COMP: regularize linkage ordering and avoid some implicit linkage (#1238)
2019-04-28 14:44:33 +02:00
0fab8abc76 COMP: adjust compilation order. Can compile OSspecific before Pstream
STYLE: report MPI flavour (WM_MPLIB) when making mpi-related libraries
2019-04-11 18:22:33 +02:00
cd91a252ac ENH: improve handling of pt-scotch headers/libraries
- provide dedicated detection 'have_ptscotch' function that can be
  used after the 'have_scotch' function.

  It sets the PTSCOTCH_ARCH_PATH, PTSCOTCH_INC_DIR, PTSCOTCH_LIB_DIR
  and helps when the serial and parallel versions are located with
  different logic.
2019-04-05 13:10:53 +02:00
ae719b87b5 ENH: exact: use parallel decomposition method 2019-03-20 15:29:47 +00:00