Commit Graph

289 Commits

Author SHA1 Message Date
608bb5d83b COMP: update lnInclude directories when building (issue #364)
- Could be related to interrupted builds.
  So if there are any parts of the build that rely on an explicit
  'wmakeLnInclude', make sure that the contents are properly updated.

--

ENH: improved feedback from top-level Allwmake

- Report which section (libraries, applications) is being built.

- Provide final summary of date, version, etc, which can be helpful
  for later diagnosis or record keeping.

- The -log=XXX option for Allwmake now accepts a directory name
  and automatically appends an appropriate log name.
  Eg,
      ./Allwmake -log=logs/  ->> logs/log.linux64GccDPInt32Opt

  The default name is built from the value of WM_OPTIONS.

--

BUG: shell not exiting properly in combination with -log option

- the use of 'tee' causes the shell to hang around.
  Added an explicit exit to catch this.

--

- Detecting the '-k' (-non-stop) option at the top-level Allwmake, which
  may improve robustness.

- Explicit continue-on-error for foamyMesh (as optional component)

- unify format of script messages for better readability

COMP: reduce warnings when building Pstream (old-style casts in openmpi)
2016-12-22 11:26:29 +01:00
c0f44ac4f3 MRG: Integrated foundation code 2016-12-12 12:10:29 +00:00
2c7eff8d6b Merge remote-tracking branch 'origin/feature-cellSetRemove' into develop 2016-12-07 14:13:00 +00:00
4a77294c7c ENH: renumberMesh: remove old files 2016-12-05 15:24:52 +00:00
2b551d8751 metisDecomp: Corrected return from metisDecomp::decompose
Resolves bug-report http://bugs.openfoam.org/view.php?id=2370
2016-12-03 19:26:21 +00:00
6534b58784 processorMeshes::read destruct before de-register
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2368
2016-12-01 22:07:50 +00:00
450d84bd77 BUG: surfaceNormalFixedValue: do not use ptf.patch(). Fixes #319 2016-12-01 14:31:22 +00:00
55ed6ec776 STYLE: use MUST_READ consistently for decomposeParDict
- there was a slight mix of MUST_READ and MUST_READ_IF_MODIFIED
  but with no obvious code to handle runtime modified values
  of the decomposition, or how this works with alternative
  dictionaries.
2016-11-24 11:26:03 +01:00
d9740aa33e ENH: redistributePar: remove pointFields 2016-11-21 17:20:34 +00:00
ae3d2f4d57 ENH: topoSet: clear sets upon writing modified mesh. Fixes #129. 2016-11-16 14:58:46 +00:00
704620aea1 ENH: simplify check for metis sizes (issue #290)
- Now that the metisDecomp uses the metis definition for float/double,
  do not need to verify the scalar sizes.

Note:
- could drop precision qualifier for metis, scotch installation
  (include, lib) as being unneeded, but it is simpler to keep them
  and continue to use the FOAM_EXT_LIBBIN path
  (in case other ThirdParty software is compiled with different
  precisions).
2016-11-13 19:53:11 +01:00
80db302666 Allwmake: Remove 'set -x' which generates a lot of noise
'set -x' should be used for debugging.

Added command printing into wmake and Allwmake as a replacement for
'set -x' to log current target.
2016-11-13 18:08:22 +00:00
0b4ff45541 metisDecomp: Use real_t for processor weights
Based on patch contributed by Alexey Matveichev
Resolves feature-request http://bugs.openfoam.org/view.php?id=2330
2016-11-12 09:03:56 +00:00
d37e86d185 metisDecomp: Use real_t for processor weights
Based on patch contributed by Alexey Matveichev
Resolves feature-request http://bugs.openfoam.org/view.php?id=2330
2016-11-12 09:03:56 +00:00
b048cacc7b ENH: robuster handling of system or central installation (issue #290)
- Follow similar pattern as per boost/CGAL with the '*-none' to disable,
  and '*-system' for system installations.

  Also support central non-ThirdParty installations by specifying the
  version as "*-system", but also providing the fully qualified
  *_ARCH_PATH too.

--
ENH: Verify label and scalar sizes used in the metis header.

- ensure they match with expected values, which can be obtained via
  the OpenFOAM definitions for WM_LABEL_SIZE and WM_PRECISION_OPTION
2016-11-09 11:10:53 +01:00
1f2ba25184 STYLE: inconsistency in scotch, metis library locations (issue #290)
- Only reference the FOAM_EXT_LIBBIN locations when linking.
  The respective SCOTCH_ARCH_PATH/lib, METIS_ARCH_PATH/lib locations
  either do not exist, or are possibly inconsistent and won't be
  seen at run-time anyhow.

- Incorporate decompose/metisDecomp/Allwmake into the top-level
  decompose/Allwmake
2016-11-04 20:01:44 +01:00
7c106cd43e GIT: Resolved conflict 2016-10-04 09:45:46 +01:00
1c2aadb8d8 ENH: distributedTriSurfaceMesh: bail out if getting stuck due to precision errors 2016-09-28 12:26:23 +01:00
47eb24bed5 GIT: Resolved conflicts arising from merge with develop branch 2016-09-26 10:57:34 +01:00
9fbd612672 GIT: Initial state after latest Foundation merge 2016-09-20 14:49:08 +01:00
04300070cf BUG: metisDecomp compile failure for WM_DP (closes #232)
- spurious use of floatScalar instead of scalar for processor weights.

STYLE: partially updated dummy metis.h to reflect metis-5.1.0 API
2016-09-13 08:51:03 +02:00
15fda67bbc decomposePar: corrected decomposeParDict read using -region option
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2227
2016-09-03 20:54:16 +01:00
a778622dfa src/parallel/decompose: Remove dependency on "SCOTCH_ROOT" and repair "decompose/Allwclean"
Patch contributed by Bruno Santos
Resolves patch request http://bugs.openfoam.org/view.php?id=2212
2016-08-23 21:53:35 +01:00
58f905ff70 C++11: Replaced the C NULL with the safer C++11 nullptr
Requires gcc version 4.7 or higher
2016-08-05 17:19:38 +01:00
2564362542 decomposePar: Speed-up decomposing with constraints
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2159
2016-07-22 17:19:21 +01:00
ab84d6941f Updated template formatting to C++11 2016-07-12 20:03:29 +01:00
dea6a3c6e8 wmake/Allwmake: Completed support for targetType 'objects'
Patch contributed by Mattijs Janssens
2016-06-24 15:25:11 +01:00
6a53ed41ba Doxygen documentation: Standardized the 'See also' heading 2016-06-17 17:31:34 +01:00
9cfccd2093 Simplify and correct Doxygen lists using '-' rather than '\li \c' 2016-06-16 20:10:39 +01:00
326b646bb8 Allwmake -update: Further improvements to handle source-tree/dep file inconsistencies after git pull
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2091
2016-06-11 16:28:40 +01:00
1be96a546c Added forward declaration of friend functions 2016-05-30 13:21:29 +01:00
67de20df25 Further standardization of loop index naming: pointI -> pointi, patchI -> patchi 2016-05-18 21:20:42 +01:00
ce0cd35185 Patches contributed by Mattijs Janssens:
splitMeshRegions: handle flipping of faces for surface fields

subsetMesh: subset dimensionedFields

decomposePar: use run-time selection of decomposition constraints. Used to
    keep cells on particular processors. See the decomposeParDict in

$FOAM_UTILITIES/parallel/decomposePar:
  - preserveBaffles: keep baffle faces on same processor
  - preserveFaceZones: keep faceZones owner and neighbour on same processor
  - preservePatches: keep owner and neighbour on same processor. Note: not
    suitable for cyclicAMI since these are not coupled on the patch level
  - singleProcessorFaceSets: keep complete faceSet on a single processor
  - refinementHistory: keep cells originating from a single cell on the
    same processor.

decomposePar: clean up decomposition of refinement data from snappyHexMesh

reconstructPar: reconstruct refinement data (refineHexMesh, snappyHexMesh)

reconstructParMesh: reconstruct refinement data (refineHexMesh, snappyHexMesh)

redistributePar:
  - corrected mapping surfaceFields
  - adding processor patches in order consistent with decomposePar

argList: check that slaves are running same version as master

fvMeshSubset: move to dynamicMesh library

fvMeshDistribute:
  - support for mapping dimensionedFields
  - corrected mapping of surfaceFields

parallel routines: allow parallel running on single processor

Field: support for
  - distributed mapping
  - mapping with flipping

mapDistribute: support for flipping

AMIInterpolation: avoid constructing localPoints
2016-05-15 16:36:48 +01:00
6c275f2aa6 metisDecomp: Reverted 7cc9ba0a53 due to compilation error 2016-05-09 13:28:09 +01:00
7cc9ba0a53 metisDecomp: Use floatScalar rather than scalar for processorWeights
Resolved bug-report http://bugs.openfoam.org/view.php?id=2085
2016-05-09 08:42:52 +01:00
b6270e821c COMP: metisDecomp: change processor weights to float 2016-05-05 11:22:22 +01:00
32762aa1f9 Change field loop index from "fieldI" to "fieldi" 2016-05-02 18:20:48 +01:00
3c053c2fe6 GeometricField: Renamed internalField() -> primitiveField() and dimensionedInternalField() -> internalField()
These new names are more consistent and logical because:

primitiveField():
primitiveFieldRef():
    Provides low-level access to the Field<Type> (primitive field)
    without dimension or mesh-consistency checking.  This should only be
    used in the low-level functions where dimensional consistency is
    ensured by careful programming and computational efficiency is
    paramount.

internalField():
internalFieldRef():
    Provides access to the DimensionedField<Type, GeoMesh> of values on
    the internal mesh-type for which the GeometricField is defined and
    supports dimension and checking and mesh-consistency checking.
2016-04-30 21:40:09 +01:00
ccd958a8f1 GeometricField::dimensionedInteralFieldRef() -> GeometricField::ref()
In order to simplify expressions involving dimensioned internal field it
is preferable to use a simpler access convention.  Given that
GeometricField is derived from DimensionedField it is simply a matter of
de-referencing this underlying type unlike the boundary field which is
peripheral information.  For consistency with the new convention in
"tmp"  "dimensionedInteralFieldRef()" has been renamed "ref()".
2016-04-30 18:43:51 +01:00
ea5401c770 GeometricField::GeometricBoundaryField -> GeometricField::Boundary
When the GeometricBoundaryField template class was originally written it
was a separate class in the Foam namespace rather than a sub-class of
GeometricField as it is now.  Without loss of clarity and simplifying
code which access the boundary field of GeometricFields it is better
that GeometricBoundaryField be renamed Boundary for consistency with the
new naming convention for the type of the dimensioned internal field:
Internal, see commit 4a57b9be2e

This is a very simple text substitution change which can be applied to
any code which compiles with the OpenFOAM-dev libraries.
2016-04-28 07:22:02 +01:00
b9313ef2fe ENH: Consistency updates after Foundation merge and code tidying 2016-04-25 16:46:56 +01:00
450728ea84 Standardized cell, patch, face and processor loop index names 2016-04-25 12:00:53 +01:00
fd9d801e2d GIT: Initial commit after latest foundation merge 2016-04-25 11:40:48 +01:00
43beb06018 Standardized cell, patch and face loop index names 2016-04-25 10:28:32 +01:00
2d5ff31649 boundaryField() -> boundaryFieldRef() 2016-04-24 22:07:37 +01:00
6e573ad7e8 UList: Rationalize assignment (shallow-copy vs deep-copy)
//- Disallow default shallow-copy assignment
    //
    //  Assignment of UList<T> may need to be either shallow (copy pointer)
    //  or deep (copy elements) depending on context or the particular type
    //  of list derived from UList and it is confusing and prone to error
    //  for the default assignment to be either.  The solution is to
    //  disallow default assignment and provide separate 'shallowCopy' and
    //  'deepCopy' member functions.
    void operator=(const UList<T>&) = delete;

    //- Copy the pointer held by the given UList.
    inline void shallowCopy(const UList<T>&);

    //- Copy elements of the given UList.
    void deepCopy(const UList<T>&);
2016-04-03 10:26:05 +01:00
1a5ba9c4ff scotchDecomp, ptscotchDecomp: Updated documentation
Patch contributed by Bruno Santos
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2032
2016-03-25 22:36:13 +00:00
95d146ecdf Rationalized the indentation of C-preprocessor directives 2016-02-29 15:42:03 +00:00
cd852be3da OpenFOAM: Updated all libraries, solvers and utilities to use the new const-safe tmp
The deprecated non-const tmp functionality is now on the compiler switch
NON_CONST_TMP which can be enabled by adding -DNON_CONST_TMP to EXE_INC
in the Make/options file.  However, it is recommended to upgrade all
code to the new safer tmp by using the '.ref()' member function rather
than the non-const '()' dereference operator when non-const access to
the temporary object is required.

Please report any problems on Mantis.

Henry G. Weller
CFD Direct.
2016-02-26 17:31:28 +00:00
350d03246e scripts: Reformat with consistent section separators 2016-02-15 18:30:24 +00:00