Commit Graph

2958 Commits

Author SHA1 Message Date
47eb24bed5 GIT: Resolved conflicts arising from merge with develop branch 2016-09-26 10:57:34 +01:00
ba249f8e76 STYLE: minor adjustment to echoed information 2016-09-26 08:02:03 +02:00
3c935ca89e Fix tensor names in foamToEnsightParts case file (fixes #243) 2016-09-26 07:41:02 +02:00
cff8efb98b ENH: reduce startup time for foamToVTK conversion
- Similar to ensight converters (issue #240),
  improve speed for detection of lagrangian clouds.

- provide a -noLagrangian option for symmetry
2016-09-23 18:45:06 +02:00
1fbcb686ff STYLE: Consistency updates 2016-09-23 16:52:46 +01:00
88ca081c8c ENH: reduce startup time for ensight conversion (issue #240).
- Less looping when detecting lagrangian clouds and their fields.

- Avoid using Time::setTime() and IOobjectList in tight loops.
  They both kill performance immensely.

ENH: provide a -noLagrangian option to foamToEnsight and foamToEnsightParts
for even more control.
2016-09-23 17:45:47 +02:00
b9940cbbb1 COMP: Multiple changes - first clean build after latest merge - UNTESTED 2016-09-23 15:36:53 +01:00
06699f17f5 BUG: ensight output failing with dimensioned field (fixes #244)
- The new field needs initialization with a dimensioned<Type> not just
  the dimensionSet.

- The new field was also incorrectly being registered, which could
  cause issues later.
2016-09-23 13:13:12 +02:00
3c25f26aab BUG: incorrect symmTensor order for some ensight output (fixes #243)
- affects foamToEnsightParts, sampled surfaces

- Use ensightPTraits mechanism throughout to avoid this issue
2016-09-23 09:10:57 +02:00
0c168c43fa ENH: improve startup time for foamToEnsight conversion (issue #240).
Old code:
    Found 10990 time steps
    Search for moving mesh ... no moving mesh detected.
    Startup in 329.09 s

Updated:
    Found 10990 time steps
    Search for moving mesh ... no moving mesh detected.
    Startup in 1.6 s

- Cause was checking "polyMesh/points" via an IOobject.
  Short-circuit with a check for a polyMesh/ directory first.

  Limit the check to the master-node as well to further reduce
  load on the file-system.

------------------------------

ENH: improve per-step conversion times for foamToEnsight.

Old code:
    Converting 11001 time steps
    Time [0] = 0       Wrote in 1.53 s
    Time [1] = 1       Wrote in 1.52 s
    ...
    Time [100] = 100   Elapsed time 205.35 s

Updated:
    Converting 11001 time steps
    Time [0] = 0       Wrote in 1.4 s
    Time [1] = 1       Wrote in 0.07 s
    ...
    Time [100] = 100   Elapsed time 42.4 s

- Speedup by hashing test results from the first conversion step
  instead of checking each time.

  Check data on all nodes to avoid problems with incomplete writes.

------------------------------

BUG: moving mesh detection failed for foamToEnsightParts

- adjusted to agree with updated foamToEnsight

------------------------------

Note:

- foamToEnsightParts (serial) still has about twice the throughput of
  foamToEnsight.
2016-09-21 18:15:19 +02:00
9fbd612672 GIT: Initial state after latest Foundation merge 2016-09-20 14:49:08 +01:00
9de4a75813 ENH: expand data mask for foamToEnsight (issue #231)
- Default is a width of 8 characters, but this can be extended up to 31
  characters via the '-width' command-line option.

- Now use a similar structure as foamToEnsightParts for the masking.
  This reduces the clutter within the directory, makes it easier to
  selectively delete some time steps (using shell commands).

- Added in a "time" information data in each sub-directory to
  make it possible to reconstruct the case file with an external
  script.

- Conversion of cloud data should now also work in parallel
  (may need more testing).

- Support binary output for cloud data.

- Better avoidance of illegal ensight variable names.
  But still partially incomplete (due to patch fields).

==================================================
Example of NEW file structure:

    EnSight/verticalChannel.case        # case name
    EnSight/geometry                    # for non-moving geometry

    EnSight/data/                       # time-varying data
    EnSight/data/00000000/
    EnSight/data/00000001/
    ...

  Fields are stored by name within the data/********/ directories:

    EnSight/data/00000001/time          # human-readable time info
    EnSight/data/00000001/U
    EnSight/data/00000001/p
    ...
    EnSight/data/00000001/geometry      # for moving geometry

  Clouds are stored at the next sub-directory level:

    EnSight/data/00000001/lagrangian/<cloudName>/positions
    EnSight/data/00000001/lagrangian/<cloudName>/U
    ...

==================================================
The old structure was significantly more cluttered:

    EnSight/verticalChannel.case
    EnSight/verticalChannel.0000.mesh
    EnSight/verticalChannel.0001.p
    EnSight/verticalChannel.0001.<cloudName>
    EnSight/verticalChannel.0001.<cloudName>.U

==================================================
2016-09-13 18:26:00 +02:00
17f0aa1db8 STYLE: propogate WM_CC for CMake (fixes #226)
- reported by Bruno
2016-09-06 16:17:20 +02:00
99efe5f8d8 BUG: triSurface IO operators are asymmetrical (fixed #225)
- Also reported as http://bugs.openfoam.org/view.php?id=2188
2016-09-06 14:57:40 +02:00
29d5a10f97 ENH: add stream operators for MeshedSurface, UnsortedMeshedSurface
- add corrsponding testing into surfaceMeshConvertTesting too
2016-09-06 14:45:44 +02:00
49bce39429 PV*Readers/Allwmake: set CXX and CC if required
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2233
2016-09-04 21:05:20 +01:00
bf9c6b6d17 foamToVTK, PVFoamReader: Resolve problems converting VTK_WEDGE
- There will be triangles rendered inside the mesh (when
    surface-rendering), because one of the cell's triangles is defined
    as a quadrangle in VTK_WEDGE.

  - Therefore, this VTK_WEDGE representation is only used when
    decomposing the mesh, otherwise the correct representation is done
    by VTK_POLYHEDRON.

  - Furthermore, using VTK_PYRAMID gave worse result, because it renders
    2 triangles inside the mesh for the collapsed quadrangle, likely due
    to mismatch with the adjacent cell's face.

  - Using VTK_HEXAHEDRON was not tested in this iteration, given that it
    should give even worse results, when compared to using VTK_PYRAMID.

Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2099
2016-08-24 22:08:10 +01:00
655fb3841a foamToVTK::vtkTopo: Apply fix from #1633
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2213
2016-08-24 09:45:23 +01:00
72bd9fd6cd ParaView: GUI resource files in plugins are no longer supported
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2192
2016-08-16 08:46:39 +01:00
fc714ed67b ENH: surfaceCheck: survive triangles with duplicate vertices. Fixes #222 2016-08-31 16:47:36 +01:00
30442158b1 ENH: snappyHexMesh: added -region option (fixes #223) 2016-08-31 09:44:34 +01:00
78bbfc4409 COMP: foamDebugSwitches: support for missing randomProcesses. Fixes #213. 2016-08-19 10:46:53 +01:00
cefe2ea541 BUG: singleCellMesh: writes constant mesh to 0 directory instead.
Fixes partially #93.
2016-08-10 15:49:09 +01:00
5b1ae76abf reconstructPar: Handle the copy of the 'uniform' directory when only 1 region is reconstructed
Resolves bug-report http://bugs.openfoam.org/view.php?id=2186
2016-08-09 16:42:48 +01:00
c5630e5cb1 Corrected nullptr collateral damage
Resolves bug-report http://bugs.openfoam.org/view.php?id=2181
2016-08-08 15:38:53 +01:00
1d194d1629 CONFIG: allow static or dynamic linkage for optional conversion utility 2016-08-08 11:58:52 +02:00
6f098748cc functionObjects: Separated writeFile and logFiles (previously writeFiles) from regionFunctionObject
Now the functionality to write single graph files or log files (vs time)
may be used in the creation of any form of functionObject, not just
those relating to a mesh region.
2016-08-07 15:23:55 +01:00
58f905ff70 C++11: Replaced the C NULL with the safer C++11 nullptr
Requires gcc version 4.7 or higher
2016-08-05 17:19:38 +01:00
70ba9e0cc0 For issue #202, re-adjust commit c3ec65d35b to use zero-gradient instead
- consistent with approach used elsewhere. Generates smaller files.
2016-08-02 21:56:40 +02:00
c3ec65d35b ENH: decomposePar -cellDist misses patches (issue #202)
- Propagate cellDist information from internal to patch fields too

NOTE: uses C++11 'auto' and a range-based for loop
2016-08-02 16:39:20 +02:00
b8614eca07 Make/options: Removed duplicate entries
Thanks to Bruno Santos for providing the script to check the files
Resolves bug-report http://bugs.openfoam.org/view.php?id=2169
2016-08-01 20:55:16 +01:00
aa30d0e7d5 checkMesh: Added option to write sets
- the checking for point-connected multiple-regions now also writes the
    conflicting points to a pointSet
  - with the -writeSets option it now also reconstructs & writes pointSets
2016-07-22 16:53:49 +01:00
43df3e4192 reconstructPar: Added support for decomposing "uniform" directories in multi-region cases
Resolves bug-report http://bugs.openfoam.org/view.php?id=2156
2016-07-20 18:47:58 +01:00
ef54ab7c59 decomposePar: Added support for decomposing "uniform" directories in multi-region cases
Resolves bug-report http://bugs.openfoam.org/view.php?id=2156
2016-07-20 16:41:45 +01:00
115a291b8a postProcess: Added call to functionObject::end() at end of time-loop
Resolves bug-report http://bugs.openfoam.org/view.php?id=2148
2016-07-19 11:57:37 +01:00
ab84d6941f Updated template formatting to C++11 2016-07-12 20:03:29 +01:00
b00e67ca37 foamChemistryReader: Added support for elements and specie composition
Based on a patch contributed by Francesco Contino, Tommaso Lucchini,
Gianluca D’Errico, Hervé Jeanmart, Nicolas Bourgeois and Stéphane
Backaert.
2016-07-12 09:05:00 +01:00
08bd802b42 checkGeometry, moveDynamicMesh: Convert processor IDs to 'List<label>'
Resolves bug-report http://bugs.openfoam.org/view.php?id=2140
2016-07-09 20:47:06 +01:00
bccf754d24 chemkinToFoam: Added support for converting elements and species composition
Based of patch contributed by Francesco Contino, Tommaso Lucchini,
Gianluca D’Errico, Hervé Jeanmart, Nicolas Bourgeois and Stéphane
Backaert.
2016-07-06 16:24:56 +01:00
9e1486fee5 checkMesh, moveDynamicMesh: option -checkAMI writes the reconstructed AMI weights
Patch contributed by Mattijs Janssens
2016-07-05 15:35:16 +01:00
f835565372 steadyParticleTracksTemplates: Corrected correspondence between function declaration and definition 2016-07-04 10:44:08 +01:00
579f559aa7 Correct handling of the CGAL version variable for makeCGAL in ThirdParty 2016-07-01 16:22:28 +01:00
f768402255 Simplified the handling of the CGAL installation 2016-07-01 14:53:28 +01:00
3e3a183732 Completed transformation of post-processing utilities into functionObjects 2016-06-28 19:26:23 +01:00
9c37e165f7 utilities particleTracks, steadyParticleTracks: Updated and corrected 2016-06-27 20:44:11 +01:00
850013e732 functionObjects::XiReactionRate: Writes the turbulent flame-speed and reaction-rate volScalarFields for the Xi-based combustion models
Replaces the obsolete and 'wdot' utility.
2016-06-27 08:58:36 +01:00
28f049e9b9 writeCellCentres utility: Replaced by writeCellCentres functionObject
postProcess -func writeCellCentres
2016-06-27 07:51:19 +01:00
dea6a3c6e8 wmake/Allwmake: Completed support for targetType 'objects'
Patch contributed by Mattijs Janssens
2016-06-24 15:25:11 +01:00
6b6a73d9b2 applications/utilities/mesh/generation/Allwmake: Build foamyHexMesh if FOAMY_HEX_MESH is set 2016-06-24 08:48:29 +01:00
96a038f281 foamyMesh: Simplify support for system CGAL installation 2016-06-21 19:47:46 +01:00