Commit Graph

88 Commits

Author SHA1 Message Date
5f93f20652 ENH: add stringOps::inplaceRemoveSpace()
Style changes:
  - use std algorithm for some stringOps internals
  - pass SubStrings iterators by const reference

ENH: special nullptr handling for ISstream getLine
  - pass through to istream::ignore to support read and discard
2020-02-19 23:36:46 +01:00
b2713d2324 ENH: declare generated methods for lagrangian and thermo/functions 2020-01-30 12:38:27 +00:00
59ed3ba18d ENH: consistency improvements for interpolationTable, table readers
- avoid stealing autoPtr in interpolationTable copy operations

- improve local memory requirements of readers

- make OpenFOAM table reader default constructible

- more code alignment between csvTableReader and Function1::CSV
  (fix #1498 for csvTableReader as well)
2020-01-21 15:17:04 +01:00
9a7adf3606 Merge branch 'master' into develop-v1906 2019-12-06 12:05:32 +00:00
7c2ad98834 ENH: improve missing entry message for Function1 or PatchFunction1
- now indicate that the dictionary entry is missing, not that it is
  an unknown function type.

STYLE: adjust PatchFunction1New.C to have logic structure look similar
2019-11-18 15:34:52 +01:00
27956330ac COMP: declare template specialisation (gcc 4.8.5) 2019-11-19 06:58:38 +01:00
b40d1d8e4f BUG: decomposePar fails with csv table in binary (fixes #1498) 2019-11-18 16:59:51 +01:00
e9219558d7 GIT: Header file updates 2019-10-31 14:48:44 +00:00
5e50800e2f ENH: improve missing entry message for Function1 or PatchFunction1
- now indicate that the dictionary entry is missing, not that it is
  an unknown function type.
2019-11-09 16:39:15 +01:00
87330972d8 ENH: interpolationTable improvements
- reduce code duplication, support returning multiple interpolations
  as a Field
2019-08-23 15:57:22 +02:00
fdf8d10ab4 Merge commit 'e9219558d7' into develop-v1906 2019-12-05 11:47:19 +00:00
fb09f56aba ENH: use FatalErrorInLookup macros (#1362) 2019-07-12 18:00:00 +02:00
3800ed8dd7 GIT: Removed unused file 2019-06-25 13:20:44 +01:00
c4a13897a1 STYLE: minor adjustments for fan tables (#1229) 2019-03-26 08:17:53 +01:00
12d9a159dc ENH: Function1: better error message. Fixes #1200. 2019-02-11 12:10:47 +00:00
154029ddd0 BOT: Cleaned up header files 2019-02-06 12:28:23 +00:00
e596377179 STYLE: avoid flush when dictionary {} closing (issue #1145)
- a holdover from introducing the endBlock() method
2019-01-03 19:12:12 +01:00
1d85fecf4d ENH: use Zero when zero-initializing types
- makes the intent clearer and avoids the need for additional
  constructor casting. Eg,

      labelList(10, Zero)    vs.  labelList(10, 0)
      scalarField(10, Zero)  vs.  scalarField(10, scalar(0))
      vectorField(10, Zero)  vs.  vectorField(10, vector::zero)
2018-12-11 23:50:15 +01:00
a7a346b206 STYLE: indentation for FatalIOErrorInFunction calls 2018-11-06 09:49:22 +01:00
0048b05fdf ENH: PatchFunction1: backwards compatibility. See #1046. 2018-10-30 15:13:23 +00:00
c20b12b62f Feature patch function1 2018-10-29 09:44:31 +00:00
4e04c1966f ENH: use dictionary::get<word>() instead of lookup() in a few places 2018-10-19 09:11:31 +02:00
3b74512231 ENH: cleanup of Enum class
- more dictionary-like methods, enforce keyType::LITERAL for all
  lookups to avoid any spurious keyword matching.

- new readEntry, readIfPresent methods

- The get() method replaces the now deprecate lookup() method.

- Deprecate lookupOrFailsafe()
  Failsafe behaviour is now an optional parameter for lookupOrDefault,
  which makes it easier to tailor behaviour at runtime.

- output of the names is now always flatted without line-breaks.
  Thus,

     os << flatOutput(someEnumNames.names()) << nl;
     os << someEnumNames << nl;

  both generate the same output.

- Constructor now uses C-string (const char*) directly instead of
  Foam::word in its initializer_list.

- Remove special enum + initializer_list constructor form since
  it can create unbounded lookup indices.

- Removd old hasEnum, hasName forms that were provided during initial
  transition from NamedEnum.

- Added static_assert on Enum contents to restrict to enum or
  integral values.  Should not likely be using this class to enumerate
  other things since it internally uses an 'int' for its values.

  Changed volumeType accordingly to enumerate on its type (enum),
  not the class itself.
2018-10-18 12:57:32 +02:00
c6520033c9 ENH: rationalize dictionary access methods
- use keyType::option enum to consolidate searching options.
  These enumeration names should be more intuitive to use
  and improve code readability.

    Eg,   lookupEntry(key, keyType::REGEX);
    vs    lookupEntry(key, false, true);

  or

    Eg,   lookupEntry(key, keyType::LITERAL_RECURSIVE);
    vs    lookupEntry(key, true, false);

- new findEntry(), findDict(), findScoped() methods with consolidated
  search options for shorter naming and access names more closely
  aligned with other components. Behave simliarly to the
  methods lookupEntryPtr(), subDictPtr(), lookupScopedEntryPtr(),
  respectively. Default search parameters consistent with lookupEntry().

    Eg, const entry* e = dict.findEntry(key);
    vs  const entry* e = dict.lookupEntryPtr(key, false, true);

- added '*' and '->' dereference operators to dictionary searchers.
2018-10-15 16:16:12 +02:00
8eddcc072a ENH: avoid readScalar, readLabel etc from dictionary (#762, #1033)
- use the dictionary 'get' methods instead of readScalar for
  additional checking

     Unchecked:  readScalar(dict.lookup("key"));
     Checked:    dict.get<scalar>("key");

- In templated classes that also inherit from a dictionary, an additional
  'template' keyword will be required. Eg,

     this->coeffsDict().template get<scalar>("key");

  For this common use case, the predefined getXXX shortcuts may be
  useful. Eg,

     this->coeffsDict().getScalar("key");
2018-10-12 08:14:47 +02:00
13778f7647 ENH: use dictionary::readEntry for detection of input errors (#762, #1033)
- instead of   dict.lookup(name) >> val;
  can use      dict.readEntry(name, val);

  for checking of input token sizes.
  This helps catch certain types of input errors:

  {

      key1 ;                // <- Missing value
      key2 1234             // <- Missing ';' terminator
      key3 val;
  }

STYLE: readIfPresent() instead of 'if found ...' in a few more places.
2018-10-05 10:15:13 +02:00
54457c68b6 Merge remote-tracking branch 'origin/master' into develop 2018-09-21 16:01:16 +01:00
5f3f101b4e BUG: Doxygen corrections 2018-09-11 12:13:19 +01:00
ef52e11d2c COMP: include Constant.H for clang-5 2018-07-30 12:17:08 +02:00
4cb073e150 ENH: Up to date icoReactingMultiphaseInterFoam solver and libs
Adding tutorials and other minor changes
2018-06-04 11:25:59 -07:00
9887c8f504 ENH: adding thermo changes to handle multiphase T based thermos 2017-08-10 09:17:14 -07:00
511b35629d ENH: improve infrastructure for detecting excess tokens (issue #762)
- Always used for optional dictionary entries, since these are individual
  values, and not meant to be embedded in a larger stream of tokens.

  Methods:
     - lookupOrDefault, lookupOrAddDefault, lookupOrDefaultCompat
     - readIfPresent, readIfPresentCompat

- Handling mandatory dictionary entries is slightly more complex,
  since these may be part of larger stream of tokens, and are often
  used in a constructor context. For example,

      word modelType(dict.lookup("type"));

  Or they are used without a definite context. For example,

      dict.lookup("format") >> outputFormat;

  Newly introduced methods for mandatory dictionary entries:
     - get, getCompat
     - read, readCompat

  In a constructor or assignment context:

      word modelType(dict.get<word>("type"));
      outputFormat = dict.lookup("format");

  without copy/move (similar to readIfPresent):

      dict.read("format", outputFormat);
2018-06-01 11:55:57 +02:00
f9fe71815a STYLE: consistent use of '= delete' for removed constructors/assignments
- make the purpose more explicit, and reduces some work for the
  compiler as well.
2018-05-30 12:03:17 +02:00
46b768628c STYLE: use FieldBase for template invariant parts
- use refCount instead of the tmp<...>::refCount alias
2018-05-16 18:03:14 +01:00
018124e3bf STYLE: use 'return nullptr' for empty autoPtr/tmp returns
- both autoPtr and tmp are defined with an implicit construct from
  nullptr (but with explicit construct from a pointer to null).
  Thus is it safe to use 'nullptr' when returning an empty autoPtr or tmp.
2018-03-21 09:31:09 +01:00
57291e8692 STYLE: use autoPtr::New and tmp::New for simple return types 2018-02-26 14:00:30 +01:00
52b36f84b5 ENH: cleanup tmp class (issue #639)
Improve alignment of its behaviour with std::shared_ptr

  - element_type typedef
  - swap, reset methods

* additional reference access methods:

cref()
    returns a const reference, synonymous with operator().
    This provides a more verbose alternative to using the '()' operator
    when that is desired.

        Mnemonic: a const form of 'ref()'

constCast()
    returns a non-const reference, regardless if the underlying object
    itself is a managed pointer or a const object.
    This is similar to ref(), but more permissive.

        Mnemonic: const_cast<>

    Using the constCast() method greatly reduces the amount of typing
    and reading. And since the data type is already defined via the tmp
    template parameter, the type deduction is automatically known.

    Previously,

        const tmp<volScalarField>& tfld;

        const_cast<volScalarField&>(tfld()).rename("name");
        volScalarField& fld = const_cast<volScalarField&>(tfld());

    Now,

        tfld.constCast().rename("name");
        auto& fld = tfld.constCast();

--

BUG: attempts to move tmp value that may still be shared.

- old code simply checked isTmp() to decide if the contents could be
  transfered. However, this means that the content of a shared tmp
  would be removed, leaving other instances without content.

* movable() method checks that for a non-null temporary that is
  unique (not shared).
2018-02-26 12:05:00 +01:00
660f3e5492 ENH: cleanup autoPtr class (issue #639)
Improve alignment of its behaviour with std::unique_ptr

  - element_type typedef
  - release() method - identical to ptr() method
  - get() method to get the pointer without checking and without releasing it.
  - operator*() for dereferencing

Method name changes

  - renamed rawPtr() to get()
  - renamed rawRef() to ref(), removed unused const version.

Removed methods/operators

  - assignment from a raw pointer was deleted (was rarely used).
    Can be convenient, but uncontrolled and potentially unsafe.
    Do allow assignment from a literal nullptr though, since this
    can never leak (and also corresponds to the unique_ptr API).

Additional methods

  - clone() method: forwards to the clone() method of the underlying
    data object with argument forwarding.

  - reset(autoPtr&&) as an alternative to operator=(autoPtr&&)

STYLE: avoid implicit conversion from autoPtr to object type in many places

- existing implementation has the following:

     operator const T&() const { return operator*(); }

  which means that the following code works:

       autoPtr<mapPolyMesh> map = ...;
       updateMesh(*map);    // OK: explicit dereferencing
       updateMesh(map());   // OK: explicit dereferencing
       updateMesh(map);     // OK: implicit dereferencing

  for clarity it may preferable to avoid the implicit dereferencing

- prefer operator* to operator() when deferenced a return value
  so it is clearer that a pointer is involve and not a function call
  etc    Eg,   return *meshPtr_;  vs.  return meshPtr_();
2018-02-26 12:00:00 +01:00
c0ba7bf05a STYLE: use Ostream writeEntry when writing key/value entries
- makes for clearer code

ENH: make writeIfDifferent part of Ostream
2017-11-06 00:49:24 +01:00
6aa7b6ac2a STYLE: Header clean-up 2017-11-07 11:22:58 +00:00
a4e63e2bfb STYLE: avoid IStringStream when parsing primitives 2017-09-21 16:10:33 +02:00
0fdcb12759 Updated to avoid warnings from gcc-7.1.1 2017-07-31 13:46:42 +01:00
577593ea34 INT: Added missing #include statement 2017-09-08 13:19:50 +01:00
d764104730 externalWallHeatFluxTemperature: Changed Ta entry to Function1 to support time variation
Temporal variation of Ta is generally more useful than spatial variation but
a run-time switch between the two modes of operation could be implemented in
needed.
2017-06-13 09:00:48 +01:00
328769b25d STYLE: Code clean-up 2017-09-07 14:30:28 +01:00
415d000db6 INT: Compatibility updates for Function1 related code 2017-09-07 10:47:54 +01:00
3b6eb380d0 Function1: Optimized field evaluations 2017-08-08 10:16:08 +01:00
2f431ffd3d made the clone function pure virtual
Avoids potential problems with derived classes which do not define a clone function.
2017-07-13 23:24:14 +01:00
5157be4bb3 Function1::ramp function: Added clone function 2017-07-13 17:04:33 +01:00
d8d6030ab6 INT: Integration of Mattijs' collocated parallel IO additions
Original commit message:
------------------------

Parallel IO: New collated file format

When an OpenFOAM simulation runs in parallel, the data for decomposed fields and
mesh(es) has historically been stored in multiple files within separate
directories for each processor.  Processor directories are named 'processorN',
where N is the processor number.

This commit introduces an alternative "collated" file format where the data for
each decomposed field (and mesh) is collated into a single file, which is
written and read on the master processor.  The files are stored in a single
directory named 'processors'.

The new format produces significantly fewer files - one per field, instead of N
per field.  For large parallel cases, this avoids the restriction on the number
of open files imposed by the operating system limits.

The file writing can be threaded allowing the simulation to continue running
while the data is being written to file.  NFS (Network File System) is not
needed when using the the collated format and additionally, there is an option
to run without NFS with the original uncollated approach, known as
"masterUncollated".

The controls for the file handling are in the OptimisationSwitches of
etc/controlDict:

OptimisationSwitches
{
    ...

    //- Parallel IO file handler
    //  uncollated (default), collated or masterUncollated
    fileHandler uncollated;

    //- collated: thread buffer size for queued file writes.
    //  If set to 0 or not sufficient for the file size threading is not used.
    //  Default: 2e9
    maxThreadFileBufferSize 2e9;

    //- masterUncollated: non-blocking buffer size.
    //  If the file exceeds this buffer size scheduled transfer is used.
    //  Default: 2e9
    maxMasterFileBufferSize 2e9;
}

When using the collated file handling, memory is allocated for the data in the
thread.  maxThreadFileBufferSize sets the maximum size of memory in bytes that
is allocated.  If the data exceeds this size, the write does not use threading.

When using the masterUncollated file handling, non-blocking MPI communication
requires a sufficiently large memory buffer on the master node.
maxMasterFileBufferSize sets the maximum size in bytes of the buffer.  If the
data exceeds this size, the system uses scheduled communication.

The installation defaults for the fileHandler choice, maxThreadFileBufferSize
and maxMasterFileBufferSize (set in etc/controlDict) can be over-ridden within
the case controlDict file, like other parameters.  Additionally the fileHandler
can be set by:
- the "-fileHandler" command line argument;
- a FOAM_FILEHANDLER environment variable.

A foamFormatConvert utility allows users to convert files between the collated
and uncollated formats, e.g.
    mpirun -np 2 foamFormatConvert -parallel -fileHandler uncollated

An example case demonstrating the file handling methods is provided in:
$FOAM_TUTORIALS/IO/fileHandling

The work was undertaken by Mattijs Janssens, in collaboration with Henry Weller.
2017-07-07 11:39:56 +01:00