Commit Graph

941 Commits

Author SHA1 Message Date
84270ed667 ENH: new PDRblockMesh mesh generation utility (issue #1216)
- While a rectilinear mesh can be created with blockMesh, not every mesh
  created with blockMesh will satisfy the requirements for being a
  rectilinear mesh.

  This alternative to blockMesh uses a single block that is aligned
  with the xy-z directions and specifications of the control points,
  mesh divisions and expansion ratios. For example,

    x
    {
        points  ( -13.28 -0.10 6.0 19.19 );
        nCells  (  10  12 10 );
        ratios  ( 0.2   1  5 );
    }

    y { ... }
    z { ... }

  With only one block, the boundary patch definition is simple and the
  canonical face number is used directly. For example,

    inlet
    {
        type    patch;
        faces   ( 0 );
    }
    outlet
    {
        type    patch;
        faces   ( 1 );
    }

    sides
    {
        type    patch;
        faces   ( 2 3 );
    }

    ...

- After a mesh is defined, it is trivial to retrieve mesh-related
  information such as cell-volume, cell-centres for any i-j-k location
  without an actual polyMesh.

STYLE: remove -noFunctionObjects from blockMesh

- no time loop, so function objects cannot be triggered anyhow.
2019-02-23 15:45:32 +01:00
7da0b5bee1 ENH: trap negative blockMesh expansions and treat as their inverse
- A negative expansion ratio is geometrically invalid and will
  normally cause issues (FatalError).
  However, we can trap this type of input and interpret it as the
  inverse expansion ratio - ie, the expansion ratio in the opposite
  direction. This can be especially convenient when generating a blockMesh
  with a symmetrical expansion. It permits using the same expansion
  ratio (with a sign change) instead of providing the reciprocal values
  manually.

COMP: revert demand-driven point creation in blockMesh (db9b35b50d)

- appears to have caused a dangling reference on some systems

ENH: add a lightweight ijkAddressing class

- it can be used for an i-j-k to linear lookup of meshes or fields,
  where applicable.
2019-02-21 19:04:22 +01:00
48e3590bc8 ENH: minor blockMesh improvements
- avoid potential ambiguities in naming of mesh faces/edges
  vs. block faces/edges

- additional methods characterizing the number of faces
  (internal, boundary, total) associated with a blockDescriptor

- cellLabel() accessor and checkIndex() methods

- restore demand-driven behaviour of block, cache the calculated cells
  and refactor generation of block boundary faces to improve potential
  reuse.
2019-02-17 19:29:22 +01:00
bd78da22e7 ENH: for-range, forAllIters() ... in mesh/
- reduced clutter when iterating over containers
2019-01-07 09:20:51 +01:00
60234ab007 STYLE: reduced nesting on return branching 2019-02-13 08:06:36 +01:00
154029ddd0 BOT: Cleaned up header files 2019-02-06 12:28:23 +00:00
da29c4f0d0 Merge branch 'feature-snappyHexMesh-check' into 'develop'
Feature snappy hex mesh check

See merge request Development/OpenFOAM-plus!229
2019-01-28 08:57:46 +00:00
d4b495131f COMP: avoid autoPtr automatic cast conversion in more places
- Can result in inadvertent conversions where the user should really
  know or check if the pointer is valid prior to using.

- Still have several places to fix that are using the deprecated copy
  construct and copy assignment
2019-01-25 12:45:22 +01:00
1c85c64984 STYLE: clarify input requirements for extrusion models (#1181)
- changed the sectorCoeffs keyword to 'point' from 'axisPt'
  for more similarity with other dictionaries.
  Continue to accept 'axisPt' for compatibility.
2019-01-24 09:40:12 +01:00
856f45a910 Merge remote-tracking branch 'origin/master' into develop 2019-01-23 21:27:03 +01:00
ed94a2714d STYLE: use HashTable iterator 'val()' method instead of 'object()' 2019-01-18 16:26:50 +01:00
f498d09dbf ENH: add simplified gather methods for globalIndex with default communicator
- when combining lists in processor order this simplifies code and
  reduces memory overhead.

  Write this:
    ----
    labelList collected;

    const globalIndex sizing(input.size());
    sizing.gather(input, collected);
    ----

  OR

    ----
    labelList collected;
    globalIndex::gatherOp(input, collected);
    ----

  Instead of this:

    ----
    labelList collected;

    List<labelList> scratch(Pstream::nProcs());
    scratch[Pstream::myProcNo()] = input;
    Pstream::gatherList(scratch);

    if (Pstream::master())
    {
        collected = ListListOps::combine<labelList>
        (
            scratch,
            accessOp<labelList>()
        );
    }
    scratch.clear();
    ----
2019-01-16 21:33:06 +01:00
a8f08b31c1 BUG: snappyHexMesh: extrude non-local baffle. Fixes #1175. 2019-01-21 15:27:51 +00:00
f67f36c63a COMP: avoid some static analysis warnings 2019-01-02 13:49:39 +01:00
10da897275 ENH: snappyHexMesh: limit printing in dry-run. See #972. 2018-12-24 08:55:42 +00:00
1d85fecf4d ENH: use Zero when zero-initializing types
- makes the intent clearer and avoids the need for additional
  constructor casting. Eg,

      labelList(10, Zero)    vs.  labelList(10, 0)
      scalarField(10, Zero)  vs.  scalarField(10, scalar(0))
      vectorField(10, Zero)  vs.  vectorField(10, vector::zero)
2018-12-11 23:50:15 +01:00
6e8cf684d1 STYLE: reduce else/if levels for return 2018-12-21 09:38:16 +01:00
99b85e3b3d COMP: disambiguate for 64-bit label 2018-12-11 19:36:23 +01:00
fc2f2e74d2 BUG: checkMesh, moveDynamicMesh checks not in postProcessing/ (fixes #1104)
- now placed under postProcessing/checkMesh and postProcessing/checkAMI,
  respectively.

  Output files are now also tagged with the id of the patch, in case
  there are multiple AMI patches in use.
2018-12-05 22:03:28 +01:00
e917586574 ENH: triSurfaceMesh: improved error message. 2018-12-03 10:33:00 +00:00
7bf4bcf4ba ENH: snappyHexMesh: Size printing, formatting. See #972. 2018-11-29 10:56:38 +00:00
0e5325bff9 ENH: snappyHexMesh: add -dry-run argument. See #972. 2018-11-26 12:23:01 +00:00
f8985566e9 BUG: snappyHexMesh: extrude non-local baffle. Fixes #1175. 2019-01-21 15:27:51 +00:00
f4ae4f7b2c ENH: snappyHexMesh. Added leak-path detection.
Detects connections (during refinement) between
locationsInsideMesh and locationsOutsideMesh and
writes a sampledSet for postprocessing.
2018-08-02 16:39:06 +01:00
22b265b482 ENH: block - added new constructor 2018-11-09 09:26:45 +00:00
d8ca517dc3 COMP: linkage, single precision 2018-11-19 12:05:28 +00:00
3cf177e759 Work-package-09 geometric constraint 2018-11-08 20:50:47 +00:00
a7a346b206 STYLE: indentation for FatalIOErrorInFunction calls 2018-11-06 09:49:22 +01:00
f5baa9a583 ENH: extend globalIndex toGlobal methods
- now applicable to labelLists.

Note:
  in some situations it will be more efficient to use
  Foam::identity() directly. Eg,

     globalIndex globalCells(mesh.nCells());
     ...
     labelList cellIds
     (
         identity(globalCells.localSize(), globalCells.localStart())
     );
2018-11-05 16:23:33 +01:00
50baac3c45 ENH: construct string types from Istream now explicit (#1033)
- this helps for trapping unguarded dictionary lookups.
2018-11-03 20:24:34 +01:00
192e2eeb9d BUG: tutorials: fix tutorials for 1812. See #1059. 2018-10-31 12:08:55 +00:00
07dafe7b0b STYLE: use range-for when looping dictionary entries.
- as part of the cleanup of dictionary access methods (c6520033c9)
  made the dictionary class single inheritance from IDLList<entry>.

  This eliminates any ambiguities for iterators and allows
  for simple use of range-for looping.

  Eg,
      for (const entry& e : topDict))
      {
          Info<< "entry:" << e.keyword() << " is dict:" << e.isDict() << nl;
      }

   vs

      forAllConstIter(dictionary, topDict, iter))
      {
          Info<< "entry:" << iter().keyword()
              << " is dict:" << iter().isDict() << nl;
      }
2018-10-19 13:08:24 +02:00
4e04c1966f ENH: use dictionary::get<word>() instead of lookup() in a few places 2018-10-19 09:11:31 +02:00
3b74512231 ENH: cleanup of Enum class
- more dictionary-like methods, enforce keyType::LITERAL for all
  lookups to avoid any spurious keyword matching.

- new readEntry, readIfPresent methods

- The get() method replaces the now deprecate lookup() method.

- Deprecate lookupOrFailsafe()
  Failsafe behaviour is now an optional parameter for lookupOrDefault,
  which makes it easier to tailor behaviour at runtime.

- output of the names is now always flatted without line-breaks.
  Thus,

     os << flatOutput(someEnumNames.names()) << nl;
     os << someEnumNames << nl;

  both generate the same output.

- Constructor now uses C-string (const char*) directly instead of
  Foam::word in its initializer_list.

- Remove special enum + initializer_list constructor form since
  it can create unbounded lookup indices.

- Removd old hasEnum, hasName forms that were provided during initial
  transition from NamedEnum.

- Added static_assert on Enum contents to restrict to enum or
  integral values.  Should not likely be using this class to enumerate
  other things since it internally uses an 'int' for its values.

  Changed volumeType accordingly to enumerate on its type (enum),
  not the class itself.
2018-10-18 12:57:32 +02:00
c6520033c9 ENH: rationalize dictionary access methods
- use keyType::option enum to consolidate searching options.
  These enumeration names should be more intuitive to use
  and improve code readability.

    Eg,   lookupEntry(key, keyType::REGEX);
    vs    lookupEntry(key, false, true);

  or

    Eg,   lookupEntry(key, keyType::LITERAL_RECURSIVE);
    vs    lookupEntry(key, true, false);

- new findEntry(), findDict(), findScoped() methods with consolidated
  search options for shorter naming and access names more closely
  aligned with other components. Behave simliarly to the
  methods lookupEntryPtr(), subDictPtr(), lookupScopedEntryPtr(),
  respectively. Default search parameters consistent with lookupEntry().

    Eg, const entry* e = dict.findEntry(key);
    vs  const entry* e = dict.lookupEntryPtr(key, false, true);

- added '*' and '->' dereference operators to dictionary searchers.
2018-10-15 16:16:12 +02:00
8eddcc072a ENH: avoid readScalar, readLabel etc from dictionary (#762, #1033)
- use the dictionary 'get' methods instead of readScalar for
  additional checking

     Unchecked:  readScalar(dict.lookup("key"));
     Checked:    dict.get<scalar>("key");

- In templated classes that also inherit from a dictionary, an additional
  'template' keyword will be required. Eg,

     this->coeffsDict().template get<scalar>("key");

  For this common use case, the predefined getXXX shortcuts may be
  useful. Eg,

     this->coeffsDict().getScalar("key");
2018-10-12 08:14:47 +02:00
6697bb4735 ENH: improve, simplify, rationalize coordinate system handling (issue #863)
Previously the coordinate system functionality was split between
coordinateSystem and coordinateRotation. The coordinateRotation stored
the rotation tensor and handled all tensor transformations.

The functionality has now been revised and consolidated into the
coordinateSystem classes. The sole purpose of coordinateRotation
is now just to provide a selectable mechanism of how to define the
rotation tensor (eg, axis-angle, euler angles, local axes) for user
input, but after providing the appropriate rotation tensor it has
no further influence on the transformations.

--

The coordinateSystem class now contains an origin and a base rotation
tensor directly and various transformation methods.

  - The origin represents the "shift" for a local coordinate system.

  - The base rotation tensor represents the "tilt" or orientation
    of the local coordinate system in general (eg, for mapping
    positions), but may require position-dependent tensors when
    transforming vectors and tensors.

For some coordinate systems (currently the cylindrical coordinate system),
the rotation tensor required for rotating a vector or tensor is
position-dependent.

The new coordinateSystem and its derivates (cartesian, cylindrical,
indirect) now provide a uniform() method to define if the rotation
tensor is position dependent/independent.

The coordinateSystem transform and invTransform methods are now
available in two-parameter forms for obtaining position-dependent
rotation tensors. Eg,

      ... = cs.transform(globalPt, someVector);

In some cases it can be useful to use query uniform() to avoid
storage of redundant values.

      if (cs.uniform())
      {
          vector xx = cs.transform(someVector);
      }
      else
      {
          List<vector> xx = cs.transform(manyPoints, someVector);
      }

Support transform/invTransform for common data types:
   (scalar, vector, sphericalTensor, symmTensor, tensor).

====================
  Breaking Changes
====================

- These changes to coordinate systems and rotations may represent
  a breaking change for existing user coding.

- Relocating the rotation tensor into coordinateSystem itself means
  that the coordinate system 'R()' method now returns the rotation
  directly instead of the coordinateRotation. The method name 'R()'
  was chosen for consistency with other low-level entities (eg,
  quaternion).

  The following changes will be needed in coding:

      Old:  tensor rot = cs.R().R();
      New:  tensor rot = cs.R();

      Old:  cs.R().transform(...);
      New:  cs.transform(...);

  Accessing the runTime selectable coordinateRotation
  has moved to the rotation() method:

      Old:  Info<< "Rotation input: " << cs.R() << nl;
      New:  Info<< "Rotation input: " << cs.rotation() << nl;

- Naming consistency changes may also cause code to break.

      Old:  transformVector()
      New:  transformPrincipal()

  The old method name transformTensor() now simply becomes transform().

====================
  New methods
====================

For operations requiring caching of the coordinate rotations, the
'R()' method can be used with multiple input points:

       tensorField rots(cs.R(somePoints));

   and later

       Foam::transformList(rots, someVectors);

The rotation() method can also be used to change the rotation tensor
via a new coordinateRotation definition (issue #879).

The new methods transformPoint/invTransformPoint provide
transformations with an origin offset using Cartesian for both local
and global points. These can be used to determine the local position
based on the origin/rotation without interpreting it as a r-theta-z
value, for example.

================
  Input format
================

- Streamline dictionary input requirements

  * The default type is cartesian.
  * The default rotation type is the commonly used axes rotation
    specification (with e1/e2/3), which is assumed if the 'rotation'
    sub-dictionary does not exist.

    Example,

    Compact specification:

        coordinateSystem
        {
            origin  (0 0 0);
            e2      (0 1 0);
            e3      (0.5 0 0.866025);
        }

    Full specification (also accepts the longer 'coordinateRotation'
    sub-dictionary name):

        coordinateSystem
        {
            type    cartesian;
            origin  (0 0 0);

            rotation
            {
                type    axes;
                e2      (0 1 0);
                e3      (0.5 0 0.866025);
            }
        }

   This simplifies the input for many cases.

- Additional rotation specification 'none' (an identity rotation):

      coordinateSystem
      {
          origin  (0 0 0);
          rotation { type none; }
      }

- Additional rotation specification 'axisAngle', which is similar
  to the -rotate-angle option for transforming points (issue #660).
  For some cases this can be more intuitive.

  For example,

      rotation
      {
          type    axisAngle;
          axis    (0 1 0);
          angle   30;
      }
  vs.
      rotation
      {
          type    axes;
          e2      (0 1 0);
          e3      (0.5 0 0.866025);
      }

- shorter names (or older longer names) for the coordinate rotation
  specification.

     euler         EulerRotation
     starcd        STARCDRotation
     axes          axesRotation

================
  Coding Style
================
- use Foam::coordSystem namespace for categories of coordinate systems
  (cartesian, cylindrical, indirect). This reduces potential name
  clashes and makes a clearer declaration. Eg,

      coordSystem::cartesian csys_;

  The older names (eg, cartesianCS, etc) remain available via typedefs.

- added coordinateRotations namespace for better organization and
  reduce potential name clashes.
2018-10-01 13:54:10 +02:00
dcc1dc1383 ENH: cylindricalCS is now in radians only (issue #863)
- this provides internal consistency and allows direct use of the
  coordinate angle with sin(), cos() functions.
  It eliminates potential issues that could otherwise arise from
  alternative user input.

  Eg, in mixerFvMesh it would have previously been possible to specify
  the coordinate system to use degrees or radians, but these units were
  not checked when determining the tangential sweep positions.

NOTE: this may represent a breaking change if user coding has been
relying on cylindrical coordinate system in degrees.
2018-09-24 11:31:04 +02:00
13778f7647 ENH: use dictionary::readEntry for detection of input errors (#762, #1033)
- instead of   dict.lookup(name) >> val;
  can use      dict.readEntry(name, val);

  for checking of input token sizes.
  This helps catch certain types of input errors:

  {

      key1 ;                // <- Missing value
      key2 1234             // <- Missing ';' terminator
      key3 val;
  }

STYLE: readIfPresent() instead of 'if found ...' in a few more places.
2018-10-05 10:15:13 +02:00
c0460d3015 Merge remote-tracking branch 'Customer-VWG/wp3-directional-refinement' into develop 2018-10-04 13:43:33 +01:00
8076963c68 ENH: snappyHexMesh: directional smoothing. See #1031 2018-10-04 12:03:53 +01:00
64c3e484bb STYLE: add nBoundaryFaces() method to primitiveMesh
- nBoundaryFaces() is often used and is identical to
  (nFaces() - nInternalFaces()).

- forward the mesh nInternalFaces() and nBoundaryFaces() to
  polyBoundaryMesh as nFaces() and start() respectively,
  for use when operating on a polyBoundaryMesh.

STYLE:

- use identity() function with starting offset when creating boundary maps.

     labelList map
     (
         identity(mesh.nBoundaryFaces(), mesh.nInternalFaces())
     );

  vs.

     labelList map(mesh.nBoundaryFaces());
     forAll(map, i)
     {
         map[i] = mesh.nInternalFaces() + i;
     }
2018-09-27 10:17:30 +02:00
eda13117e4 STYLE: explicitly use degrees in arcEdge coordinate system (#1015)
- safeguard against any change in the default in cylindricalCS
2018-09-19 22:32:29 +02:00
bf43a9d91e ENH: snappyHexMesh: allow medialAxis to shrink 1 or 2 cell thick channel. Fixes #986. 2018-08-30 11:38:38 +01:00
6c22596f3b ENH: snappyHexMesh: input checking. See #972. 2018-08-13 15:55:41 +01:00
4d6f0498d6 ENH: use vector::normalise and VectorSpace::normalised for clarity 2018-08-10 15:18:29 +02:00
c1964d7807 ENH: distinguish between face areaNormal/unitNormal in the code 2018-08-10 15:43:06 +02:00
b81a2f2fa6 STYLE: use edge::unitVec() for improved code clarity 2018-08-10 14:41:32 +02:00
ca5d91239d STYLE: use edgeHashes include
STYLE: use initial hash size 128 instead of 100 in a few places
2018-08-08 23:54:27 +02:00
319e09e32f ENH: avoid blockMesh removal of files for special cases (issue #963)
- do not remove if the dictionary failed to load.
- do not remove if -blockTopology was used.
2018-08-03 14:30:41 +02:00