Commit Graph

6668 Commits

Author SHA1 Message Date
7b2931272f ENH: potentialFoam - phi output now controlled by the -writephi command line option 2019-08-05 09:49:18 +01:00
ef9bb4ae16 ENH: add low-level readRawLabels, readRawScalars (#1378)
- these use the additional byte-size checks in IOstream to handle
  native vs non-native sizes
2019-07-29 16:01:34 +02:00
8b3d77badc ENH: make OSstream indentation adjustable
- this is principally for cases where reduced indentation is desired,
  such as when streaming to a memory location. If the indentation size
  is zero or one, only a single space will be used to separate the
  key/value.

  This change does not affect the stream allocation size, since the
  extra data falls within the padding.

ENH: relocate label/scalar sizes from Istream to IOstream.

- could allow future use for output streams as well?

  Due to padding, reorganization has no effect on allocated size
  of output streams.

STYLE: add read/write name qualifier to beginRaw, endRaw

- removes ambiguity for bi-directional streams

STYLE: fix inconsistent 'const' qualifier on std::streamsize

- base Ostream was without const, some derived streams with const
2019-07-31 12:51:54 +02:00
6f8da834a9 ENH: add OListStream::swap(DynamicList<char>&)
- allows full recovery of allocated space, not just addressable range.

  This can be particularly useful for code patterns that repeatedly
  reuse the same buffer space. For example,

      DynamicList<char> buf(1024);

      // some loop
      {
          OListStream os(std::move(buf));
          os << ...

          os.swap(buf);
      }

   Can read back from this buffer as a second operation:

      {
          UIListStream is(buf);
          is >> ...
      }
2019-07-31 11:31:40 +02:00
b0d32ce1b4 STYLE: use 'operator>>' instead of readLabel and readScalar 2019-07-30 14:52:46 +02:00
743311df7d STYLE: consistent access for particle sizeofFields, particle iterators 2019-07-30 14:22:56 +02:00
3d0ed07fff DEFEATURE: remove particle PropertyTypes (revert of #109)
- data types were used for initial adios interface, but this proved
  difficult to manage and maintain.
2019-07-30 11:47:46 +02:00
5382c2f590 STYLE: fix namespace documentation for CGAL-related content 2019-07-30 18:15:48 +02:00
78ce269a52 ENH: add field operations for complex (#1365) 2019-07-28 21:19:43 +02:00
f94be1bebb ENH: use FatalIOErrorInLookup instead of FatalErrorInLookup 2019-07-16 10:26:51 +02:00
fb09f56aba ENH: use FatalErrorInLookup macros (#1362) 2019-07-12 18:00:00 +02:00
1d86fc4f6b ENH: add single-parameter sortedOrder() function 2019-07-17 11:08:40 +02:00
5788fe056c STYLE: missing -postProcess option on basic solvers (#1375) 2019-07-16 12:09:00 +02:00
ba3f0734c0 ENH: added FatalErrorInLookup, FatalIOErrorInLookup macros (#1362)
- to simplify/unify error handling

STYLE: use NotImplemented instead of longer notImplemented(...)
2019-07-12 18:00:00 +02:00
bbc2d4a8b0 ENH: HashTable and HashSet improvements
- unfriend HashSet, HashTable IO operators

- global min(), max(), minMax() functions taking a labelHashSet and an
  optional limit. For example,

      labelHashSet set = ...;

      Info<< "min is " << min(set) << nl;
      Info<< "max (non-negative) " << max(set, 0) << nl;

- make HashTable iterator '->' dereferencing more consistent by also
  supporting non-pointer types as well.

- read HashTable values in-situ to avoid copying
2019-07-12 18:00:00 +02:00
488f8938b2 ENH: add invert (inverse mappings) for bitSet 2019-07-12 12:00:00 +02:00
f1a48a3c2f ENH: accept bitSet for MeshedSurface::subsetMesh
- add triSurface::subsetMesh single-parameter variant
2019-07-12 08:54:34 +02:00
10a03ceba2 STYLE: relocate Allwmake-scan to src/
- reduced clutter. Mostly only need to scan source tree.

- 00-dummy: use wmake/src/Allmake to get native (not cross-compiled)
  wmake toolchain binaries
2019-06-28 09:55:25 +02:00
96e7dd8da6 Merge branch 'develop' 2019-06-27 13:27:57 +01:00
15a763b931 COMP: Resolved some name clashes for #ifdef statements 2019-06-26 11:52:15 +01:00
be44dcaf1f RELEASE: Version clean-up for release 2019-06-25 11:51:19 +01:00
51bb4e0037 STYLE: remove trailing spaces 2019-06-26 11:36:49 +02:00
d286951008 BUG: Fix thermos templates for Lee model 2019-06-25 08:50:07 -07:00
016526baee Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2019-06-24 08:13:47 -07:00
1bd2ef7c21 ENH: Adding Lee thermos for icoReactingMultiphaseInterFoam 2019-06-24 08:12:58 -07:00
fa8ab2d5b4 STYLE: add Test-copyFile 2019-06-24 14:46:38 +02:00
8e3df10069 STYLE: overBuoyantPimpleDyMFoam: consistent directory naming 2019-06-20 10:26:24 +01:00
ecc1fb5efb CONTRIB: New adjoint optimisation and tools
A set of libraries and executables creating a workflow for performing
gradient-based optimisation loops. The main executable (adjointOptimisationFoam)
solves the flow (primal) equations, followed by the adjoint equations and,
eventually, the computation of sensitivity derivatives.

Current functionality supports the solution of the adjoint equations for
incompressible turbulent flows, including the adjoint to the Spalart-Allmaras
turbulence model and the adjoint to the nutUSpaldingWallFunction, [1], [2].

Sensitivity derivatives are computed with respect to the normal displacement of
boundary wall nodes/faces (the so-called sensitivity maps) following the
Enhanced Surface Integrals (E-SI) formulation, [3].

The software was developed by PCOpt/NTUA and FOSS GP, with contributions from

Dr. Evangelos Papoutsis-Kiachagias,
Konstantinos Gkaragounis,
Professor Kyriakos Giannakoglou,
Andy Heather

and contributions in earlier version from

Dr. Ioannis Kavvadias,
Dr. Alexandros Zymaris,
Dr. Dimitrios Papadimitriou

[1] A.S. Zymaris, D.I. Papadimitriou, K.C. Giannakoglou, and C. Othmer.
Continuous adjoint approach to the Spalart-Allmaras turbulence model for
incompressible flows. Computers & Fluids, 38(8):1528–1538, 2009.

[2] E.M. Papoutsis-Kiachagias and K.C. Giannakoglou. Continuous adjoint methods
for turbulent flows, applied to shape and topology optimization: Industrial
applications. 23(2):255–299, 2016.

[3] I.S. Kavvadias, E.M. Papoutsis-Kiachagias, and K.C. Giannakoglou. On the
proper treatment of grid sensitivities in continuous adjoint methods for shape
optimization. Journal of Computational Physics, 301:1–18, 2015.

Integration into the official OpenFOAM release by OpenCFD
2019-06-17 12:59:11 +01:00
f0a4f8ee48 COMP: skip reactingEulerFoam compilation on mingw (#1238)
- pending resolution of cyclic dependencies
2019-06-14 13:58:37 +02:00
64ed81b78f BUG: gmsh: skip empty lines. See #1155.
Fix provided by Gavin Ridley.
2019-04-11 11:07:28 +01:00
8ab09daad0 BUG: foamToVTK writes to undecomposed case (closes #1271)
- when running in serial but within a processor directory,
  argList::globalPath() is to be used instead of Time.globalPath()
  For other cases there is no difference.
2019-04-08 11:53:50 +02:00
44d7dc8545 BUG: dereference invalid autoPtr in XiEngineFoam (fixes #1250) 2019-03-26 09:42:27 +01:00
7322f73a31 Merge branch 'feature-isoAdvectorWithMorphingMeshes' into 'develop'
Introduced changes required to make isoAdvector and interIsoFoam work with...

See merge request Development/OpenFOAM-plus!257
2019-06-13 21:35:20 +01:00
da07aa9ac0 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2019-06-13 12:13:04 -07:00
50cdddf46a ENH: New solidThermo to ReactingMultiphaseInterFoam 2019-06-13 12:11:09 -07:00
f863925112 STYLE: use uintptr_t instead of long 2019-06-13 19:37:27 +02:00
e716d1c073 ENH: surfactantFoam: run cleanly. See #1328
- do not write 0/ directory
- clean case in ./Allclean
2019-06-13 14:24:58 +01:00
b1563dc03e ENH: Handling of phaseProperties in temperatureCoupledBase.
Adding poly solid thermo to InterfaceCompositionModel for use
on icoReactingMultiphaseInterFoam
2019-06-12 10:35:49 -07:00
3a1178ff12 BUG: Fixing problem with parallel DTRMParticle 2019-06-11 16:12:36 -07:00
8170f2ad92 INT: Org integration of VOF, Euler phase solvers and models.
Integration of VOF MULES new interfaces. Update of VOF solvers and all instances
of MULES in the code.
Integration of reactingTwoPhaseEuler and reactingMultiphaseEuler solvers and sub-models
Updating reactingEuler tutorials accordingly (most of them tested)

New eRefConst thermo used in tutorials. Some modifications at thermo specie level
affecting mostly eThermo. hThermo mostly unaffected

New chtMultiRegionTwoPhaseEulerFoam solver for quenching and tutorial.

Phases sub-models for reactingTwoPhaseEuler and reactingMultiphaseEuler were moved
to src/phaseSystemModels/reactingEulerFoam in order to be used by BC for
chtMultiRegionTwoPhaseEulerFoam.

Update of interCondensatingEvaporatingFoam solver.
2019-06-07 09:38:35 +01:00
24371a1d84 BUG: set the oriented flag - see #1324 2019-06-05 14:12:51 +01:00
289a7acf76 ENH: p field for potentialFoam now registsered 2019-06-05 14:11:50 +01:00
61c87b5552 Introduced changes required to make isoAdvector and interIsoFoam work with morphing meshes: 1) In the alphaEqn.H U is made relative to mesh motion before the interface advection step, 2) in isoAdvection::advect() alpha must be multiplied by Vsc0()/Vsc(). Implementation tested and verified with 1) a spherical interface in a cubic domain with no flow, where the domain walls are squeezed together and 2) a spherical interfacee inside the sloshingCylinder, again with no flow, so the sphere should stay spherical, which it does. 2019-04-30 16:07:48 +02:00
03de501310 STYLE: fix file permissions, inconsistent Test files 2019-06-04 17:50:18 +02:00
5c58b07f5a ENH: Adding overBuoyantPimpleFoam and tutorial 2019-06-04 12:18:13 -07:00
e42cc287de BUG: incorrect scalar/complex division (#1331)
ENH: define addition/subtraction operations for scalar and complex

- required since construct complex from scalar is explicit
- additional tests in Test-complex
2019-06-04 09:08:42 +01:00
fc11c40841 ENH: add wmake -debug option
- forces c++DBUG='-DFULLDEBUG -g -O0' for the compilation, to allow
  localized debugging during development without file editing and
  while retaining the WM_COMPILE_OPTION (eg, Opt)

  Note that switching between 'wmake' and 'wmake -debug' will not
  cause existing targets to be rebuilt. As before, these are driven by
  the dependencies. An intermediate wclean may thus be required.
2019-06-03 10:16:31 +02:00
745624c024 ENH: partial overhaul of Matrix type (#1220)
- additional operators:
  + compound assignment
  + inner product: operator&
  + outer product: operator^

- additional functions:
   - MatrixBlock methods: subColumn, subRow, subMatrix
   - L2 norms for matrix or column
   - trace, diag, round, transpose

- MatrixBlock methods: col(), block() are deprecated since their
  access patterns with (size, offset) are unnatural/unwieldy.

- verifications by test/Matrix/Test-Matrix
2019-05-23 11:32:45 +01:00
db0678bf0e TUT: incorrect regex escaping in fvSchemes
- error trapped by C++11 regex
2019-05-30 14:26:15 +02:00
96d0a8f2af ENH: harmonize matrix constructors (#1220)
- generalize identity matrix constructors for non-scalar types

- add constructors using labelPair for the row/column sizing information.
  For a SquareMatrix, this provides an unambiguous parameter resolution.

- reuse assignment operators

STYLE: adjust matrix comments
2019-05-29 09:50:46 +02:00