Commit Graph

97 Commits

Author SHA1 Message Date
88ca081c8c ENH: reduce startup time for ensight conversion (issue #240).
- Less looping when detecting lagrangian clouds and their fields.

- Avoid using Time::setTime() and IOobjectList in tight loops.
  They both kill performance immensely.

ENH: provide a -noLagrangian option to foamToEnsight and foamToEnsightParts
for even more control.
2016-09-23 17:45:47 +02:00
06699f17f5 BUG: ensight output failing with dimensioned field (fixes #244)
- The new field needs initialization with a dimensioned<Type> not just
  the dimensionSet.

- The new field was also incorrectly being registered, which could
  cause issues later.
2016-09-23 13:13:12 +02:00
3c25f26aab BUG: incorrect symmTensor order for some ensight output (fixes #243)
- affects foamToEnsightParts, sampled surfaces

- Use ensightPTraits mechanism throughout to avoid this issue
2016-09-23 09:10:57 +02:00
0c168c43fa ENH: improve startup time for foamToEnsight conversion (issue #240).
Old code:
    Found 10990 time steps
    Search for moving mesh ... no moving mesh detected.
    Startup in 329.09 s

Updated:
    Found 10990 time steps
    Search for moving mesh ... no moving mesh detected.
    Startup in 1.6 s

- Cause was checking "polyMesh/points" via an IOobject.
  Short-circuit with a check for a polyMesh/ directory first.

  Limit the check to the master-node as well to further reduce
  load on the file-system.

------------------------------

ENH: improve per-step conversion times for foamToEnsight.

Old code:
    Converting 11001 time steps
    Time [0] = 0       Wrote in 1.53 s
    Time [1] = 1       Wrote in 1.52 s
    ...
    Time [100] = 100   Elapsed time 205.35 s

Updated:
    Converting 11001 time steps
    Time [0] = 0       Wrote in 1.4 s
    Time [1] = 1       Wrote in 0.07 s
    ...
    Time [100] = 100   Elapsed time 42.4 s

- Speedup by hashing test results from the first conversion step
  instead of checking each time.

  Check data on all nodes to avoid problems with incomplete writes.

------------------------------

BUG: moving mesh detection failed for foamToEnsightParts

- adjusted to agree with updated foamToEnsight

------------------------------

Note:

- foamToEnsightParts (serial) still has about twice the throughput of
  foamToEnsight.
2016-09-21 18:15:19 +02:00
9de4a75813 ENH: expand data mask for foamToEnsight (issue #231)
- Default is a width of 8 characters, but this can be extended up to 31
  characters via the '-width' command-line option.

- Now use a similar structure as foamToEnsightParts for the masking.
  This reduces the clutter within the directory, makes it easier to
  selectively delete some time steps (using shell commands).

- Added in a "time" information data in each sub-directory to
  make it possible to reconstruct the case file with an external
  script.

- Conversion of cloud data should now also work in parallel
  (may need more testing).

- Support binary output for cloud data.

- Better avoidance of illegal ensight variable names.
  But still partially incomplete (due to patch fields).

==================================================
Example of NEW file structure:

    EnSight/verticalChannel.case        # case name
    EnSight/geometry                    # for non-moving geometry

    EnSight/data/                       # time-varying data
    EnSight/data/00000000/
    EnSight/data/00000001/
    ...

  Fields are stored by name within the data/********/ directories:

    EnSight/data/00000001/time          # human-readable time info
    EnSight/data/00000001/U
    EnSight/data/00000001/p
    ...
    EnSight/data/00000001/geometry      # for moving geometry

  Clouds are stored at the next sub-directory level:

    EnSight/data/00000001/lagrangian/<cloudName>/positions
    EnSight/data/00000001/lagrangian/<cloudName>/U
    ...

==================================================
The old structure was significantly more cluttered:

    EnSight/verticalChannel.case
    EnSight/verticalChannel.0000.mesh
    EnSight/verticalChannel.0001.p
    EnSight/verticalChannel.0001.<cloudName>
    EnSight/verticalChannel.0001.<cloudName>.U

==================================================
2016-09-13 18:26:00 +02:00
c35bcc05f4 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-06-27 23:22:54 +01:00
efb39a8790 ENH: (further) Doxygen documentation updates for module support 2016-06-27 20:34:19 +01:00
704cfa1e0a ENH: add timing/memory info to foamToEnsight, foamToEnsightParts, foamToVTK
- useful for performance comparisons
2016-06-26 15:39:43 +02:00
8a7880af2e BUG: ensightBinaryStream: avoid overflow. Fixes #132 2016-06-01 14:44:30 +01:00
b9313ef2fe ENH: Consistency updates after Foundation merge and code tidying 2016-04-25 16:46:56 +01:00
fd9d801e2d GIT: Initial commit after latest foundation merge 2016-04-25 11:40:48 +01:00
730f89dc9d Use Zero rather than pTraits<Type>::zero unless a static typed '0' is required 2016-03-22 17:46:52 +00:00
cd852be3da OpenFOAM: Updated all libraries, solvers and utilities to use the new const-safe tmp
The deprecated non-const tmp functionality is now on the compiler switch
NON_CONST_TMP which can be enabled by adding -DNON_CONST_TMP to EXE_INC
in the Make/options file.  However, it is recommended to upgrade all
code to the new safer tmp by using the '.ref()' member function rather
than the non-const '()' dereference operator when non-const access to
the temporary object is required.

Please report any problems on Mantis.

Henry G. Weller
CFD Direct.
2016-02-26 17:31:28 +00:00
9e3ce4ec7f Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus into feature-shared-file
Conflicts:
	applications/utilities/mesh/advanced/refinementLevel/refinementLevel.C
	applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/initialPointsMethod/pointFile/pointFile.C
	applications/utilities/miscellaneous/foamHelp/helpTypes/helpBoundary/helpBoundary.C
	applications/utilities/postProcessing/graphics/PV3Readers/PV3FoamReader/vtkPV3Foam/vtkPV3FoamUpdateInfo.C
	applications/utilities/postProcessing/graphics/PV4Readers/PV4FoamReader/vtkPV4Foam/vtkPV4FoamUpdateInfo.C
	applications/utilities/postProcessing/turbulence/createTurbulenceFields/createTurbulenceFields.C
	applications/utilities/postProcessing/velocityField/Co/Co.C
	applications/utilities/postProcessing/velocityField/Pe/Pe.C
	applications/utilities/preProcessing/applyBoundaryLayer/applyBoundaryLayer.C
	applications/utilities/preProcessing/changeDictionary/changeDictionary.C
	applications/utilities/preProcessing/setFields/setFields.C
	applications/utilities/surface/surfaceMeshConvert/surfaceMeshConvert.C
	applications/utilities/surface/surfaceMeshExport/surfaceMeshExport.C
	applications/utilities/surface/surfaceMeshImport/surfaceMeshImport.C
	applications/utilities/surface/surfaceRedistributePar/surfaceRedistributePar.C
	src/OpenFOAM/db/IOobject/IOobject.C
	src/OpenFOAM/db/IOobjects/CompactIOList/CompactIOList.C
	src/OpenFOAM/db/IOobjects/IOField/IOField.C
	src/OpenFOAM/db/IOobjects/IOList/IOList.C
	src/OpenFOAM/db/IOobjects/IOPtrList/IOPtrList.C
	src/OpenFOAM/db/IOobjects/IOdictionary/IOdictionary.C
	src/OpenFOAM/db/Time/findInstance.C
	src/OpenFOAM/db/regIOobject/regIOobject.C
	src/OpenFOAM/db/regIOobject/regIOobjectI.H
	src/OpenFOAM/db/regIOobject/regIOobjectRead.C
	src/OpenFOAM/db/regIOobject/regIOobjectWrite.C
	src/OpenFOAM/meshes/polyMesh/mapPolyMesh/mapDistribute/IOmapDistribute.C
	src/OpenFOAM/meshes/polyMesh/polyBoundaryMesh/polyBoundaryMesh.C
	src/OpenFOAM/meshes/polyMesh/zones/ZoneMesh/ZoneMesh.C
	src/dynamicMesh/fvMeshDistribute/IOmapDistributePolyMesh.C
	src/dynamicMesh/motionSolver/componentDisplacement/componentDisplacementMotionSolver.C
	src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8/hexRef8Data.C
	src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8/refinementHistory.C
	src/dynamicMesh/polyTopoChange/polyTopoChanger/polyTopoChanger.C
	src/edgeMesh/edgeMeshFormats/edgeMesh/edgeMeshFormat.C
	src/edgeMesh/extendedEdgeMesh/extendedEdgeMeshFormats/extendedEdgeMeshFormat/extendedEdgeMeshFormat.C
	src/edgeMesh/extendedEdgeMesh/extendedFeatureEdgeMesh/extendedFeatureEdgeMesh.C
	src/fvMotionSolver/fvMotionSolvers/displacement/interpolation/displacementInterpolationMotionSolver.C
	src/fvMotionSolver/pointPatchFields/derived/uniformInterpolatedDisplacement/uniformInterpolatedDisplacementPointPatchVectorField.C
	src/lagrangian/basic/Cloud/CloudIO.C
	src/meshTools/sets/cellSources/fieldToCell/fieldToCell.C
	src/postProcessing/foamCalcFunctions/basic/addSubtract/addSubtract.C
	src/postProcessing/functionObjects/field/fieldCoordinateSystemTransform/fieldCoordinateSystemTransformTemplates.C
	src/postProcessing/functionObjects/field/readFields/readFieldsTemplates.C
	src/thermophysicalModels/radiation/radiationModels/fvDOM/radiativeIntensityRay/radiativeIntensityRay.C
	src/triSurface/triSurface/surfacePatch/surfacePatchIOList.C
2016-01-25 16:29:04 +00:00
e424059208 ENH: glboal file handling: initial commit
Moved file path handling to regIOobject and made it type specific so
now every object can have its own rules. Examples:
- faceZones are now processor local (and don't search up anymore)
- timeStampMaster is now no longer hardcoded inside IOdictionary
  (e.g. uniformDimensionedFields support it as well)
- the distributedTriSurfaceMesh is properly processor-local; no need
  for fileModificationChecking manipulation.
2016-01-25 13:03:15 +00:00
56fa7c0906 Update code to use the simpler C++11 template syntax removing spaces between closing ">"s 2016-01-10 22:41:16 +00:00
61dd625227 ENH: checkMesh: have -writeSets option
- checkMesh has option to write faceSets or (outside of) cellSets as
sampledSurface format. It automatically reconstructs the set on the master
and writes it to the postProcessing folder (as any sampledSurface). E.g.

    mpirun -np 6 checkMesh -allTopology -allGeometry -writeSets vtk -parallel

- fixed order writing of symmTensor in Ensight writers
2015-11-23 15:24:33 +00:00
916dcb8685 ENH: parallel: overhaul of parallel mapping
- redistributePar to have almost (complete) functionality of decomposePar+reconstructPar
- low-level distributed Field mapping
- support for mapping surfaceFields (including flipping faces)
- support for decomposing/reconstructing refinement data
2015-11-17 15:05:05 +00:00
c778346c96 Formatting: Rationalized the indentation of #include 2015-02-10 20:35:50 +00:00
feaa3021b6 STYLE: Updated copyright year 2014-02-21 11:17:31 +00:00
59cef386cd BUG: foamToEnsight: handle empty patches 2014-02-20 13:39:56 +00:00
d648760ead Update headers 2014-01-30 13:02:02 +00:00
ee4e19ef85 Renamed folder -> directory for consistency with POSIX and the rest of OpenFOAM 2014-01-30 13:01:04 +00:00
8712b8276e BUG: foamToEnsight: reset facePrimitives 2013-10-18 16:19:33 +01:00
198d0ebc6f ENH: foamToEnsight: cellZone support 2013-09-11 09:31:20 +01:00
90a8332ffb ENH: foamToEnsight: add cellZone support 2013-09-05 16:25:03 +01:00
401b2624f9 COMP: foamToEnsight: missing include dir 2013-08-13 15:30:58 +01:00
472fbded89 BUG: ensight: symmTensor writing 2013-08-13 10:19:10 +01:00
88ceb57654 BUG: foamToEnsight: 4 digit files 2013-05-20 09:29:51 +01:00
d40c785591 Merge branch 'master' of /home/dm4/OpenFOAM/OpenFOAM-dev 2013-04-08 16:30:18 +01:00
ccb38822ea BUG: foamToEnsight: using 3 digit extension 2013-04-08 16:29:45 +01:00
34ac08a931 ENH: Code updates following changed to IOobjectList 2013-04-08 15:33:02 +01:00
e637dc30d1 Merge branch 'master' of /home/dm4/OpenFOAM/OpenFOAM-dev 2013-02-21 16:11:47 +00:00
951c8436aa ENH: Applying Gijs' patch: Update header documentation for utilities 2013-02-21 10:54:34 +00:00
d1d6c3bd12 ENH: foamToEnsight: work with more >1000 times 2013-02-19 10:39:23 +00:00
7c8522082e STYLE: Code formatting 2013-02-07 16:44:07 +00:00
de638685be BUG: foamToEnsight: detect moving/changing meshes 2012-08-01 15:55:41 +01:00
4f40cdb7d7 GIT: Resolve conflict 2011-08-16 16:09:56 +01:00
c2dd153a14 Copyright transfered to the OpenFOAM Foundation 2011-08-14 12:17:30 +01:00
c3cb632c24 Documentation: converted javadoc @ to LaTeX style \ in Doxygen code docs 2011-02-08 18:22:00 +00:00
eaef8d482b STYLE: Updated 1991 start copyright year to 2004 2011-01-14 16:08:00 +00:00
099cc39e2e Revert "STYLE: 2011 copyright date."
This reverts commit b18f6cc1ce.
2011-01-05 18:24:29 +00:00
b18f6cc1ce STYLE: 2011 copyright date. 2011-01-05 11:14:26 +00:00
2d43d949b7 STYLE: foamToEnsight : remove some extraneous scoping 2010-12-16 19:01:48 +00:00
0ad7b2cda8 STYLE: foamToEnsight : indentation 2010-10-21 14:07:45 +01:00
1526db114b BUG: foamToEnsight : wedge and hex numbering inconsistent between mesh and fields 2010-10-15 15:26:25 +01:00
1f2829ac2a ENH: foamToEnsight : filter proc patches only if running parallel 2010-10-14 18:31:08 +01:00
5158b331b3 BUG: foamToEnsight : missing truncation of hexes 2010-10-13 11:02:33 +01:00
3f2747c669 BUG: foamToEnsight: filtering empty patches from geom but not fields. 2010-10-08 18:00:50 +01:00
f749327105 ENH: foamToEnsight : nodal values on boundaries. WIP. 2010-10-08 17:11:22 +01:00