Commit Graph

292 Commits

Author SHA1 Message Date
8eddcc072a ENH: avoid readScalar, readLabel etc from dictionary (#762, #1033)
- use the dictionary 'get' methods instead of readScalar for
  additional checking

     Unchecked:  readScalar(dict.lookup("key"));
     Checked:    dict.get<scalar>("key");

- In templated classes that also inherit from a dictionary, an additional
  'template' keyword will be required. Eg,

     this->coeffsDict().template get<scalar>("key");

  For this common use case, the predefined getXXX shortcuts may be
  useful. Eg,

     this->coeffsDict().getScalar("key");
2018-10-12 08:14:47 +02:00
fdf19d67a4 Merge branch 'feature-coordinateSystem' into 'develop'
coordinate system improvements

See merge request Development/OpenFOAM-plus!211
2018-10-11 16:32:03 +01:00
8d6f83e666 ENH: isLiteral() method for keyType and wordRe
- same as !isPattern(), but can be more readable.

- add wordRe enum state 'UNKNOWN', which has the identical value as
  'DETECT' but used for a return value.
2018-10-07 17:28:11 +02:00
6697bb4735 ENH: improve, simplify, rationalize coordinate system handling (issue #863)
Previously the coordinate system functionality was split between
coordinateSystem and coordinateRotation. The coordinateRotation stored
the rotation tensor and handled all tensor transformations.

The functionality has now been revised and consolidated into the
coordinateSystem classes. The sole purpose of coordinateRotation
is now just to provide a selectable mechanism of how to define the
rotation tensor (eg, axis-angle, euler angles, local axes) for user
input, but after providing the appropriate rotation tensor it has
no further influence on the transformations.

--

The coordinateSystem class now contains an origin and a base rotation
tensor directly and various transformation methods.

  - The origin represents the "shift" for a local coordinate system.

  - The base rotation tensor represents the "tilt" or orientation
    of the local coordinate system in general (eg, for mapping
    positions), but may require position-dependent tensors when
    transforming vectors and tensors.

For some coordinate systems (currently the cylindrical coordinate system),
the rotation tensor required for rotating a vector or tensor is
position-dependent.

The new coordinateSystem and its derivates (cartesian, cylindrical,
indirect) now provide a uniform() method to define if the rotation
tensor is position dependent/independent.

The coordinateSystem transform and invTransform methods are now
available in two-parameter forms for obtaining position-dependent
rotation tensors. Eg,

      ... = cs.transform(globalPt, someVector);

In some cases it can be useful to use query uniform() to avoid
storage of redundant values.

      if (cs.uniform())
      {
          vector xx = cs.transform(someVector);
      }
      else
      {
          List<vector> xx = cs.transform(manyPoints, someVector);
      }

Support transform/invTransform for common data types:
   (scalar, vector, sphericalTensor, symmTensor, tensor).

====================
  Breaking Changes
====================

- These changes to coordinate systems and rotations may represent
  a breaking change for existing user coding.

- Relocating the rotation tensor into coordinateSystem itself means
  that the coordinate system 'R()' method now returns the rotation
  directly instead of the coordinateRotation. The method name 'R()'
  was chosen for consistency with other low-level entities (eg,
  quaternion).

  The following changes will be needed in coding:

      Old:  tensor rot = cs.R().R();
      New:  tensor rot = cs.R();

      Old:  cs.R().transform(...);
      New:  cs.transform(...);

  Accessing the runTime selectable coordinateRotation
  has moved to the rotation() method:

      Old:  Info<< "Rotation input: " << cs.R() << nl;
      New:  Info<< "Rotation input: " << cs.rotation() << nl;

- Naming consistency changes may also cause code to break.

      Old:  transformVector()
      New:  transformPrincipal()

  The old method name transformTensor() now simply becomes transform().

====================
  New methods
====================

For operations requiring caching of the coordinate rotations, the
'R()' method can be used with multiple input points:

       tensorField rots(cs.R(somePoints));

   and later

       Foam::transformList(rots, someVectors);

The rotation() method can also be used to change the rotation tensor
via a new coordinateRotation definition (issue #879).

The new methods transformPoint/invTransformPoint provide
transformations with an origin offset using Cartesian for both local
and global points. These can be used to determine the local position
based on the origin/rotation without interpreting it as a r-theta-z
value, for example.

================
  Input format
================

- Streamline dictionary input requirements

  * The default type is cartesian.
  * The default rotation type is the commonly used axes rotation
    specification (with e1/e2/3), which is assumed if the 'rotation'
    sub-dictionary does not exist.

    Example,

    Compact specification:

        coordinateSystem
        {
            origin  (0 0 0);
            e2      (0 1 0);
            e3      (0.5 0 0.866025);
        }

    Full specification (also accepts the longer 'coordinateRotation'
    sub-dictionary name):

        coordinateSystem
        {
            type    cartesian;
            origin  (0 0 0);

            rotation
            {
                type    axes;
                e2      (0 1 0);
                e3      (0.5 0 0.866025);
            }
        }

   This simplifies the input for many cases.

- Additional rotation specification 'none' (an identity rotation):

      coordinateSystem
      {
          origin  (0 0 0);
          rotation { type none; }
      }

- Additional rotation specification 'axisAngle', which is similar
  to the -rotate-angle option for transforming points (issue #660).
  For some cases this can be more intuitive.

  For example,

      rotation
      {
          type    axisAngle;
          axis    (0 1 0);
          angle   30;
      }
  vs.
      rotation
      {
          type    axes;
          e2      (0 1 0);
          e3      (0.5 0 0.866025);
      }

- shorter names (or older longer names) for the coordinate rotation
  specification.

     euler         EulerRotation
     starcd        STARCDRotation
     axes          axesRotation

================
  Coding Style
================
- use Foam::coordSystem namespace for categories of coordinate systems
  (cartesian, cylindrical, indirect). This reduces potential name
  clashes and makes a clearer declaration. Eg,

      coordSystem::cartesian csys_;

  The older names (eg, cartesianCS, etc) remain available via typedefs.

- added coordinateRotations namespace for better organization and
  reduce potential name clashes.
2018-10-01 13:54:10 +02:00
6627515838 ENH: fieldMinMax function object - updated for case where there are no cells on a local processor, e.g. CHT 2018-10-03 13:06:31 +01:00
54457c68b6 Merge remote-tracking branch 'origin/master' into develop 2018-09-21 16:01:16 +01:00
5f3f101b4e BUG: Doxygen corrections 2018-09-11 12:13:19 +01:00
6e35bcda70 ENH: Updated config for release v1806 2018-06-28 12:56:00 +01:00
c1964d7807 ENH: distinguish between face areaNormal/unitNormal in the code 2018-08-10 15:43:06 +02:00
1036cf9612 ENH: avoid raw dictionary lookup in functionObjects (issue #762)
Style changes:
    - use lookupObjectRef instead of using const_cast
    - use tmp::New factory
2018-08-04 00:23:18 +02:00
f8bf897ca3 STYLE: stabilityBlending: typos; line length. See also #875. 2018-06-21 11:55:10 +01:00
017213deca Merge branch 'develop-pre-release' of develop.openfoam.com:Development/OpenFOAM-plus into develop-pre-release 2018-06-20 16:44:35 -07:00
649149f9de ENH: Improvements to the log format and fix write function 2018-06-20 16:43:00 -07:00
f15be4d0b0 BUG: bad indexing in regionSizeDistribution function object (closes #888) 2018-06-20 13:51:30 +02:00
7bf7aaea91 ENH: Further enhancements to stabilizationSchemes 2018-06-19 12:04:27 -07:00
a3a6768608 ENH: Adding additional entry to stabilizationSchemes.
Correcting tutorial and expanding documentation
2018-06-19 11:21:56 -07:00
48332c8f16 functionObjects::ddt: New functionObject which calculates and writes the Eulerian time derivative of a field
Based on patch contributed by Tobias Holzmann
Resolves feature-request https://bugs.openfoam.org/view.php?id=2525
2017-11-05 10:58:07 +00:00
d016590bbc ENH: AMIInterpolation - updated to perform face triangulation once only; code clean-up 2017-08-18 14:09:34 +01:00
0ec8e3e780 STY: Formatting log output for stabilityBlendingFactor 2018-06-15 13:43:57 -07:00
d77df7aa11 STY: Improving log info in stabilityBlendingFactor 2018-06-14 12:44:43 -07:00
853ec2bf64 STYLE: doxygen fixes for surfaceFieldValue 2018-06-14 16:14:31 +02:00
7ca3da492e COMP: single-precision build 2018-06-14 12:03:19 +02:00
54ebae39de STYLE: mention uniformity index in doxygen 2018-06-13 16:54:28 +02:00
53959e7e45 COMP: ambiguous construction from tmp (clang)
STYLE: more consistent use of dimensioned Zero
2018-06-13 12:46:15 +02:00
bb1fe5fcfc STY: Modifying warning message 2018-06-11 16:15:38 -07:00
46e7dab0cb ENH: Adding stabilizationSchemes FO and tutorial 2018-06-06 12:54:34 -07:00
aec949d7cc ENH: Consistency improvement for setting postProcessing directory name 2018-02-27 14:37:05 +00:00
f51ee9a0e2 Merge remote-tracking branch 'origin/develop' into develop-pre-release 2018-05-31 17:34:16 +01:00
f9fe71815a STYLE: consistent use of '= delete' for removed constructors/assignments
- make the purpose more explicit, and reduces some work for the
  compiler as well.
2018-05-30 12:03:17 +02:00
6b6b36afd3 STYLE: revert bitSet/HashSet setMany() to set() method (issue #837)
- improves backward compatibility and more naming consistency.
  Retain setMany(iter1, iter2) to avoid ambiguity with the
  PackedList::set(index, value) method.
2018-05-29 17:38:02 +02:00
ec5d9cdf01 Merge remote-tracking branch 'origin/develop' into develop-pre-release 2018-05-29 12:13:58 +01:00
417a2f6a73 BUG: reference FO: allocate interpolator on all processors. Fixes #823. 2018-05-24 09:52:33 +01:00
56231b5b5f STYLE: use FatalIOError and minor changes to log output 2018-05-09 12:43:11 +01:00
16f3eac7d6 ENH: reference FO - position entry is now optional 2018-05-09 12:15:43 +01:00
091d847094 ENH: Added a new function object to create a field relative to a field value
Calculates and outputs a field whose values are offset to a reference
    value obtained by sampling the field at a user-specified location.

    The field values are calculated using:

    \f[
        f_c = s(f_{c,t} - f_p + f_{off})
    \f]

    where
    \vartable
        f_c     | field values at cell
        s       | optional scale factor (default = 1)
        f_{c,t} | current field values at cell at this time
        f_p     | field value at position
        f_{off} | offset field value (default = 0)
    \endvartable

Usage
    Example of function object specification to calculate the reference
field:
    \verbatim
    pRef
    {
        type        reference;
        libs        ("libfieldFunctionObjects.so");
        ...
        field       p;
        result      pRef;
        position    (0 0 0);
        scale       1.2;
        offset      100000;
    }
    \endverbatim
2018-05-08 13:19:46 +01:00
b0648f2ba0 ENH: improvements in the surface sampling infrastructure
- improvement documentation for surface sampling.

- can now specify alternative sampling scheme for obtaining the
  face values instead of just using the "cell" value. For example,

      sampleScheme    cellPoint;

  This can be useful for cases when the surface is close to a boundary
  cell and there are large gradients in the sampled field.

- distanceSurface now handles non-closed surfaces more robustly.
  Unknown regions (not inside or outside) are marked internally and
  excluded from consideration. This allows use of 'signed' surfaces
  where not previously possible.
2018-05-07 11:29:00 +02:00
4fe8ed8245 STYLE: use direct iteration for HashSet
- The iterator for a HashSet dereferences directly to its key.

- Eg,

      for (const label patchi : patchSet)
      {
          ...
      }
  vs.
      forAllConstIter(labelHashSet, patchSet, iter)
      {
          const label patchi = iter.key();
          ...
      }
2018-03-06 00:29:03 +01:00
2a6ac7edce BUG: nearWallFields: correct exit condition for particles. Fixes #812. 2018-04-30 13:08:58 +01:00
c0766ce8ea STYLE: consistent '// End namespace' markers 2018-04-27 09:51:35 +02:00
bac943e6fc ENH: new bitSet class and improved PackedList class (closes #751)
- The bitSet class replaces the old PackedBoolList class.
  The redesign provides better block-wise access and reduced method
  calls. This helps both in cases where the bitSet may be relatively
  sparse, and in cases where advantage of contiguous operations can be
  made. This makes it easier to work with a bitSet as top-level object.

  In addition to the previously available count() method to determine
  if a bitSet is being used, now have simpler queries:

    - all()  - true if all bits in the addressable range are empty
    - any()  - true if any bits are set at all.
    - none() - true if no bits are set.

  These are faster than count() and allow early termination.

  The new test() method tests the value of a single bit position and
  returns a bool without any ambiguity caused by the return type
  (like the get() method), nor the const/non-const access (like
  operator[] has). The name corresponds to what std::bitset uses.

  The new find_first(), find_last(), find_next() methods provide a faster
  means of searching for bits that are set.

  This can be especially useful when using a bitSet to control an
  conditional:

  OLD (with macro):

      forAll(selected, celli)
      {
          if (selected[celli])
          {
              sumVol += mesh_.cellVolumes()[celli];
          }
      }

  NEW (with const_iterator):

      for (const label celli : selected)
      {
          sumVol += mesh_.cellVolumes()[celli];
      }

      or manually

      for
      (
          label celli = selected.find_first();
          celli != -1;
          celli = selected.find_next()
      )
      {
          sumVol += mesh_.cellVolumes()[celli];
      }

- When marking up contiguous parts of a bitset, an interval can be
  represented more efficiently as a labelRange of start/size.
  For example,

  OLD:

      if (isA<processorPolyPatch>(pp))
      {
          forAll(pp, i)
          {
              ignoreFaces.set(i);
          }
      }

  NEW:

      if (isA<processorPolyPatch>(pp))
      {
          ignoreFaces.set(pp.range());
      }
2018-03-07 11:21:48 +01:00
a230e8d408 STYLE: Correcting typos 2018-03-28 17:14:16 +01:00
3a569c9fd5 ENH: streamLineBase - construct with curve distance 2018-03-27 11:01:06 +01:00
801fb7bd5f ENH: streamLine/wallBoundedStreamLine - minor refactoring to enable new derived functionality 2018-03-27 11:00:12 +01:00
5f88e4271e ENH: allow "<case>", "<system>" ... in the string expansions (issue #792)
- the expansions were previously required as slash to follow, but
  now either are possible.

    "<case>", "<case>/" both yield the same as "$FOAM_CASE" and
    will not have a trailing slash in the result. The expansion of
    "$FOAM_CASE/" will however have a trailing slash.

- adjust additional files using these expansions
2018-04-11 23:10:49 +02:00
018124e3bf STYLE: use 'return nullptr' for empty autoPtr/tmp returns
- both autoPtr and tmp are defined with an implicit construct from
  nullptr (but with explicit construct from a pointer to null).
  Thus is it safe to use 'nullptr' when returning an empty autoPtr or tmp.
2018-03-21 09:31:09 +01:00
2f86cdc712 STYLE: more consistent use of dimensioned Zero
- when constructing dimensioned fields that are to be zero-initialized,
  it is preferrable to use a form such as

      dimensionedScalar(dims, Zero)
      dimensionedVector(dims, Zero)

  rather than

      dimensionedScalar("0", dims, 0)
      dimensionedVector("zero", dims, vector::zero)

  This reduces clutter and also avoids any suggestion that the name of
  the dimensioned quantity has any influence on the field's name.

  An even shorter version is possible. Eg,

      dimensionedScalar(dims)

  but reduces the clarity of meaning.

- NB: UniformDimensionedField is an exception to these style changes
  since it does use the name of the dimensioned type (instead of the
  regIOobject).
2018-03-16 10:24:03 +01:00
36719bf55b STYLE: consistent lookupOrDefault template parameters
- in many cases can just use lookupOrDefault("key", bool) instead of
  lookupOrDefault<bool> or lookupOrDefault<Switch> since reading a
  bool from an Istream uses the Switch(Istream&) anyhow

STYLE: relocated Switch string names into file-local scope
2018-03-26 09:09:09 +02:00
e53384362c ENH: added surfaceFieldValue uniformity operation 2018-03-22 22:38:34 +01:00
d17bc72585 ENH: consistency of HashSet setMany(), insertMany() with packed-list version
- this also provides a better separation of the intent
  (ie, inserting a single value, or inserting multiply values)
2018-03-14 21:08:29 +01:00
5d1fb23555 ENH: code reduction in PackedList, PackedBoolList (issue #751)
- eliminate iterators from PackedList since they were unused, had
  lower performance than direct access and added unneeded complexity.

- eliminate auto-vivify for the PackedList '[] operator.
  The set() method provides any required auto-vivification and
  removing this ability from the '[]' operator allows for a lower
  when accessing the values. Replaced the previous cascade of iterators
  with simpler reference class.

PackedBoolList:

- (temporarily) eliminate logic and addition operators since
  these contained partially unclear semantics.

- the new test() method tests the value of a single bit position and
  returns a bool without any ambiguity caused by the return type
  (like the get() method), nor the const/non-const access (like
  operator[] has). The name corresponds to what std::bitset uses.

- more consistent use of PackedBoolList test(), set(), unset() methods
  for fewer operation and clearer code. Eg,

      if (list.test(index)) ...    |  if (list[index]) ...
      if (!list.test(index)) ...   |  if (list[index] == 0u) ...
      list.set(index);             |  list[index] = 1u;
      list.unset(index);           |  list[index] = 0u;

- deleted the operator=(const labelUList&) and replaced with a setMany()
  method for more clarity about the intended operation and to avoid any
  potential inadvertent behaviour.
2018-03-13 08:32:40 +01:00