Commit Graph

1016 Commits

Author SHA1 Message Date
e5d9fd13c2 ENH: relocate meshSubsetHelper into dynamicMesh for re-use
- reuse for foamToTecplot360 and foamToVTK.
- remove dependency on vtkMesh where possible.
2016-11-09 23:33:24 +01:00
f0107b47f5 Merge branch 'ensight-preview' into 'develop'
Reworking of the ensight infrastructue and new ensightWrite function object



See merge request !70
2016-11-03 08:24:52 +00:00
40ed1952c3 ENH: noise models - enable the use of environment variables in input file names. Fixes #285 2016-11-01 20:51:51 +00:00
c499de996b ENH: Removed unused file 2016-11-01 14:29:20 +00:00
aca0b1ca04 COMP: ensight writer compilation for 64-bit labels (issue #263)
GIT: added missing source file.

ENH: add tutorial example under incompressible/simpleFoam/motorBike
2016-10-28 11:49:05 +02:00
b2ee629a94 BUG: removed oddness in pointer allocations (ensight parts).
- manifest in some parallel operations.

STYLE: update foamToEnsight, foamToEnsightParts to use C++ initializer_list

- avoid warning message when removing a non-existent directory (ensight output).
2016-10-27 15:11:30 +02:00
af81184ecf MRG: Resolve conflict with latest foundation merge 2016-10-26 15:37:15 +01:00
2c06a905ab Cleanup endian support (closes #271)
- Place common code under OSspecific.

By including "endian.H", either one of WM_BIG_ENDIAN or WM_LITTLE_ENDIAN
will be defined.

Provides inline 32-bit and 64-bit byte swap routines that can be
used/re-used elsewhere.

The inplace memory swaps currently used by the VTK output are left for
the moment pending further cleanup of that code.
2016-10-17 12:02:01 +02:00
3915942195 ENH: cleanup ensightParts to use updated infrastructure (issue #241).
- Use ensightCase for case writing.
  Rebase ensightPartCells/ensightPartFaces on
  ensightCells/ensightFaces routines.

- Greatly reduces code duplication potential source of errors.
2016-10-07 11:24:47 +02:00
9b3f36d593 STYLE: reinstate targetType when building paraview modules (related to #258)
- potentially useful for static builds
2016-10-07 10:51:32 +02:00
b04a6a05e5 GIT: relocate ensight components to library locations 2016-10-05 13:13:12 +02:00
e57ca15bda ENH: complete reworking of foamToEnsight to make into a library (issue #241)
- eliminate ensightAsciiStream, ensightBinaryStream, ensightStream in
  favour of using ensightFile and ensightGeoFile classes throughout.

- encapsulate mesh-parts sorting with the ensightCells, ensightFaces
  class.

- handle of patches/faceZones entirely within ensightMesh for a lighter
  interaction with field output. Both faceZones and point fields need
  more testing to see if they behave properly for all cases.

- move some output functionality into its own namespace
  'ensightOutput', move into a library.

- use the ensightCase class to open new ensight output streams
  in the proper sub-directory locations.
2016-10-06 10:43:22 +02:00
68ad4c50b2 BUG: paraview plugin not being built in merged version (closes #258) 2016-10-04 15:58:24 +02:00
3e0e4532fd STYLE: minor adjustments to doxygen comments 2016-10-04 09:16:08 +02:00
bd0e982d99 MRG: Initial commit after latest Foundation merge 2016-09-30 11:16:28 +01:00
47eb24bed5 GIT: Resolved conflicts arising from merge with develop branch 2016-09-26 10:57:34 +01:00
ba249f8e76 STYLE: minor adjustment to echoed information 2016-09-26 08:02:03 +02:00
3c935ca89e Fix tensor names in foamToEnsightParts case file (fixes #243) 2016-09-26 07:41:02 +02:00
cff8efb98b ENH: reduce startup time for foamToVTK conversion
- Similar to ensight converters (issue #240),
  improve speed for detection of lagrangian clouds.

- provide a -noLagrangian option for symmetry
2016-09-23 18:45:06 +02:00
88ca081c8c ENH: reduce startup time for ensight conversion (issue #240).
- Less looping when detecting lagrangian clouds and their fields.

- Avoid using Time::setTime() and IOobjectList in tight loops.
  They both kill performance immensely.

ENH: provide a -noLagrangian option to foamToEnsight and foamToEnsightParts
for even more control.
2016-09-23 17:45:47 +02:00
b9940cbbb1 COMP: Multiple changes - first clean build after latest merge - UNTESTED 2016-09-23 15:36:53 +01:00
06699f17f5 BUG: ensight output failing with dimensioned field (fixes #244)
- The new field needs initialization with a dimensioned<Type> not just
  the dimensionSet.

- The new field was also incorrectly being registered, which could
  cause issues later.
2016-09-23 13:13:12 +02:00
3c25f26aab BUG: incorrect symmTensor order for some ensight output (fixes #243)
- affects foamToEnsightParts, sampled surfaces

- Use ensightPTraits mechanism throughout to avoid this issue
2016-09-23 09:10:57 +02:00
0c168c43fa ENH: improve startup time for foamToEnsight conversion (issue #240).
Old code:
    Found 10990 time steps
    Search for moving mesh ... no moving mesh detected.
    Startup in 329.09 s

Updated:
    Found 10990 time steps
    Search for moving mesh ... no moving mesh detected.
    Startup in 1.6 s

- Cause was checking "polyMesh/points" via an IOobject.
  Short-circuit with a check for a polyMesh/ directory first.

  Limit the check to the master-node as well to further reduce
  load on the file-system.

------------------------------

ENH: improve per-step conversion times for foamToEnsight.

Old code:
    Converting 11001 time steps
    Time [0] = 0       Wrote in 1.53 s
    Time [1] = 1       Wrote in 1.52 s
    ...
    Time [100] = 100   Elapsed time 205.35 s

Updated:
    Converting 11001 time steps
    Time [0] = 0       Wrote in 1.4 s
    Time [1] = 1       Wrote in 0.07 s
    ...
    Time [100] = 100   Elapsed time 42.4 s

- Speedup by hashing test results from the first conversion step
  instead of checking each time.

  Check data on all nodes to avoid problems with incomplete writes.

------------------------------

BUG: moving mesh detection failed for foamToEnsightParts

- adjusted to agree with updated foamToEnsight

------------------------------

Note:

- foamToEnsightParts (serial) still has about twice the throughput of
  foamToEnsight.
2016-09-21 18:15:19 +02:00
9fbd612672 GIT: Initial state after latest Foundation merge 2016-09-20 14:49:08 +01:00
9de4a75813 ENH: expand data mask for foamToEnsight (issue #231)
- Default is a width of 8 characters, but this can be extended up to 31
  characters via the '-width' command-line option.

- Now use a similar structure as foamToEnsightParts for the masking.
  This reduces the clutter within the directory, makes it easier to
  selectively delete some time steps (using shell commands).

- Added in a "time" information data in each sub-directory to
  make it possible to reconstruct the case file with an external
  script.

- Conversion of cloud data should now also work in parallel
  (may need more testing).

- Support binary output for cloud data.

- Better avoidance of illegal ensight variable names.
  But still partially incomplete (due to patch fields).

==================================================
Example of NEW file structure:

    EnSight/verticalChannel.case        # case name
    EnSight/geometry                    # for non-moving geometry

    EnSight/data/                       # time-varying data
    EnSight/data/00000000/
    EnSight/data/00000001/
    ...

  Fields are stored by name within the data/********/ directories:

    EnSight/data/00000001/time          # human-readable time info
    EnSight/data/00000001/U
    EnSight/data/00000001/p
    ...
    EnSight/data/00000001/geometry      # for moving geometry

  Clouds are stored at the next sub-directory level:

    EnSight/data/00000001/lagrangian/<cloudName>/positions
    EnSight/data/00000001/lagrangian/<cloudName>/U
    ...

==================================================
The old structure was significantly more cluttered:

    EnSight/verticalChannel.case
    EnSight/verticalChannel.0000.mesh
    EnSight/verticalChannel.0001.p
    EnSight/verticalChannel.0001.<cloudName>
    EnSight/verticalChannel.0001.<cloudName>.U

==================================================
2016-09-13 18:26:00 +02:00
17f0aa1db8 STYLE: propogate WM_CC for CMake (fixes #226)
- reported by Bruno
2016-09-06 16:17:20 +02:00
b8614eca07 Make/options: Removed duplicate entries
Thanks to Bruno Santos for providing the script to check the files
Resolves bug-report http://bugs.openfoam.org/view.php?id=2169
2016-08-01 20:55:16 +01:00
115a291b8a postProcess: Added call to functionObject::end() at end of time-loop
Resolves bug-report http://bugs.openfoam.org/view.php?id=2148
2016-07-19 11:57:37 +01:00
8bb78dda60 ENH: provide a vfork/exec version of system (issue #185)
The normal library system() command uses 'fork', which causes
problems on IB+OPENMPI.

STYLE: add Foam:: qualifier to system calls to make them easier to spot.
2016-07-18 13:37:39 +02:00
f835565372 steadyParticleTracksTemplates: Corrected correspondence between function declaration and definition 2016-07-04 10:44:08 +01:00
3e3a183732 Completed transformation of post-processing utilities into functionObjects 2016-06-28 19:26:23 +01:00
9c37e165f7 utilities particleTracks, steadyParticleTracks: Updated and corrected 2016-06-27 20:44:11 +01:00
850013e732 functionObjects::XiReactionRate: Writes the turbulent flame-speed and reaction-rate volScalarFields for the Xi-based combustion models
Replaces the obsolete and 'wdot' utility.
2016-06-27 08:58:36 +01:00
28f049e9b9 writeCellCentres utility: Replaced by writeCellCentres functionObject
postProcess -func writeCellCentres
2016-06-27 07:51:19 +01:00
dea6a3c6e8 wmake/Allwmake: Completed support for targetType 'objects'
Patch contributed by Mattijs Janssens
2016-06-24 15:25:11 +01:00
6a53ed41ba Doxygen documentation: Standardized the 'See also' heading 2016-06-17 17:31:34 +01:00
b3f3562d3c Doxygen documentation: Use the standard 'Usage' rather than the '\heading....' 2016-06-17 17:22:24 +01:00
1319df48d9 Rationalized Doxygen documentation of command-line options 2016-06-17 09:11:58 +01:00
ecfbdce3da ENH: avoid deprecated resource xml when building paraview plugins (fixes #181)
- remove old VTK_CONVEX_POINT_SET code, since VTK_POLYHEDRON exists
  since several years

ENH: improve robustness of paraFoam script

- only check the relevant plugin types,
  fallback to native reader if needed/possible.
2016-07-12 11:17:57 +02:00
6ed05f0cd3 STYLE: mention suppression of banner for surfaceMeshInfo, ... (issue #125) 2016-07-06 07:43:05 +02:00
6d71d03f44 ENH: default to collateTimes on for ensight output
- the uncollated version becomes quite difficult to process.

  Caveat: cannot use "collateTimes true" for non-static geometries
2016-06-30 15:32:21 +02:00
7972d0b0e3 ENH: Noise functionality library and application updates 2016-06-29 20:46:20 +01:00
fe13ff56fc ENH: Updated ensight surface file reading 2016-06-29 20:43:20 +01:00
cc36db19de GIT: Resolved conflict 2016-06-28 16:59:01 +01:00
029825b83c applications/utilities: Reorganized 2016-06-13 17:02:43 +01:00
fda11f60b1 foamListTimes: moved to applications/utilities/miscellaneous/foamListTimes 2016-06-13 16:42:25 +01:00
dfd9d97646 Utility ptot has been superceded by the postProcess utility:
postProcess -func 'totalPressureIncompressible(U,p)'
or
    postProcess -func 'totalPressureCompressible(rho,U,p)'
2016-06-13 16:42:00 +01:00
de02a089ba tutorials: Removed references to 'sampleDict' 2016-06-13 14:53:56 +01:00
d9f423ec85 Utility sample: replaced by 'postProcess -func sample'
To re-use existing 'sampleDict' files simply add the following entries:

    type sets;
    libs ("libsampling.so");

and run

    postProcess -func sampleDict

It is probably better to also rename 'sampleDict' -> 'sample' and then run

    postProcess -func sampleDict
2016-06-13 14:27:46 +01:00