Commit Graph

1003 Commits

Author SHA1 Message Date
f0a046fa81 GIT: Resolved conflict 2016-12-14 15:56:58 +00:00
6a3c2c2fbc STYLE: Updated comment 2016-12-14 15:27:19 +00:00
c0f44ac4f3 MRG: Integrated foundation code 2016-12-12 12:10:29 +00:00
2c7eff8d6b Merge remote-tracking branch 'origin/feature-cellSetRemove' into develop 2016-12-07 14:13:00 +00:00
c6acd68618 ENH: Added new regionSplit2D to split 2-D regions based on an indicator field 2016-11-29 14:41:02 +00:00
8b219feda2 Updated member type comments
See http://bugs.openfoam.org/view.php?id=2356
2016-11-28 09:22:56 +00:00
81de1dc9ac topoSet: cellZoneSet, pointZoneSet extensions
cellZones and pointZones can now be created in one action without the
need to first create a cellSet or pointSet and converting that to the
corresponding zone, e.g.

actions
(
    // Example: create cellZone from a box region
    {
        name    c0;
        type    cellZoneSet;
        action  new;
        source  boxToCell;
        sourceInfo
        {
            box   (0.04 0 0)(0.06 100 100);
        }
    }
);
2016-11-25 16:01:41 +00:00
c3005794ab ENH: provide triSurfaceTools::validTri() method to reduce code duplication
- identical code was present in surfaceCheck (original source),
  and isoSurface, isoSurfaceCell (copies).

- add in a MeshedSurface<face> variant as well, since this will likely
  be needed in the near future
2016-11-24 15:31:32 +01:00
1f826361c6 STYLE: Consistency updates to change input of <var>Name to <var>. Fixes #306 2016-11-22 14:50:33 +00:00
ae3d2f4d57 ENH: topoSet: clear sets upon writing modified mesh. Fixes #129. 2016-11-16 14:58:46 +00:00
af81184ecf MRG: Resolve conflict with latest foundation merge 2016-10-26 15:37:15 +01:00
4408d47075 MRG: Merged develop branch and resolved conflicts 2016-10-19 13:33:00 +01:00
3773db53e9 blockMesh: Added projected vertices and edges
Patch contributed by Mattijs Janssens

    - Added projected vertices
    - Added projected edges
    - Change of blockEdges API (operate on list lambdas)
    - Change of blockFaces API (pass in blockDescriptor and blockFacei)
    - Added sphere7ProjectedEdges tutorial to demonstrate vertex and edge projection
2016-10-18 14:06:23 +01:00
c4a4c38858 ENH: subTriSurfaceMesh: fixed comment 2016-10-17 12:24:11 +01:00
009203188f blockMesh: New experimental support for projecting block face point to geometric surfaces
For example, to mesh a sphere with a single block the geometry is defined in the
blockMeshDict as a searchableSurface:

    geometry
    {
        sphere
        {
            type searchableSphere;
            centre (0 0 0);
            radius 1;
        }
    }

The vertices, block topology and curved edges are defined in the usual
way, for example

    v 0.5773502;
    mv -0.5773502;

    a 0.7071067;
    ma -0.7071067;

    vertices
    (
        ($mv $mv $mv)
        ( $v $mv $mv)
        ( $v  $v $mv)
        ($mv  $v $mv)
        ($mv $mv  $v)
        ( $v $mv  $v)
        ( $v  $v  $v)
        ($mv  $v  $v)
    );

    blocks
    (
        hex (0 1 2 3 4 5 6 7) (10 10 10) simpleGrading (1 1 1)
    );

    edges
    (
        arc 0 1 (0 $ma $ma)
        arc 2 3 (0 $a $ma)
        arc 6 7 (0 $a $a)
        arc 4 5 (0 $ma $a)

        arc 0 3 ($ma 0 $ma)
        arc 1 2 ($a 0 $ma)
        arc 5 6 ($a 0 $a)
        arc 4 7 ($ma 0 $a)

        arc 0 4 ($ma $ma 0)
        arc 1 5 ($a $ma 0)
        arc 2 6 ($a $a 0)
        arc 3 7 ($ma $a 0)
    );

which will produce a mesh in which the block edges conform to the sphere
but the faces of the block lie somewhere between the original cube and
the spherical surface which is a consequence of the edge-based
transfinite interpolation.

Now the projection of the block faces to the geometry specified above
can also be specified:

    faces
    (
        project (0 4 7 3) sphere
        project (2 6 5 1) sphere
        project (1 5 4 0) sphere
        project (3 7 6 2) sphere
        project (0 3 2 1) sphere
        project (4 5 6 7) sphere
    );

which produces a mesh that actually conforms to the sphere.

See OpenFOAM-dev/tutorials/mesh/blockMesh/sphere

This functionality is experimental and will undergo further development
and generalization in the future to support more complex surfaces,
feature edge specification and extraction etc.  Please get involved if
you would like to see blockMesh become a more flexible block-structured
mesher.

Henry G. Weller, CFD Direct.
2016-10-13 15:05:24 +01:00
b9940cbbb1 COMP: Multiple changes - first clean build after latest merge - UNTESTED 2016-09-23 15:36:53 +01:00
9fbd612672 GIT: Initial state after latest Foundation merge 2016-09-20 14:49:08 +01:00
c193493822 EulerCoordinateRotation,STARCDCoordinateRotation: Corrected typo
Resolves bug-report http://bugs.openfoam.org/view.php?id=2225
2016-09-03 16:46:01 +01:00
e44cc9697b AMIInterpolation: Make tracking across AMI more robust
If a suitable face an the receiving side of the AMI cannot be found the
particle is marked for deletion.
2016-08-16 11:33:27 +01:00
c7a291aca8 STYLE: relocate faceTriangulation, labelPairLookup into meshTools (issue #294)
- were in triSurface, but only actually used within meshTools
2016-08-11 19:38:29 +02:00
6afc9fb15d ENH: tetOverlapVolume - improved robustness. Fixes #207 2016-08-11 12:14:43 +01:00
3dffee8a6a STYLE: change MeshedSurface 'faces' access to 'surfFaces' (related to issue #104)
- use surfFaces() to return the templated list of faces.
  This frees up the method 'faces()' to be used as a virtual method,
  which will be needed at a later stage.
2016-08-10 10:03:51 +02:00
58f905ff70 C++11: Replaced the C NULL with the safer C++11 nullptr
Requires gcc version 4.7 or higher
2016-08-05 17:19:38 +01:00
2564362542 decomposePar: Speed-up decomposing with constraints
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2159
2016-07-22 17:19:21 +01:00
2ed6b4da92 STYLE: documentation typo in EulerCoordinateRotation, add external reference 2016-07-06 11:47:10 +02:00
b16756115a Remove/replace deprecated functions and classes 2016-06-20 09:39:02 +01:00
6a53ed41ba Doxygen documentation: Standardized the 'See also' heading 2016-06-17 17:31:34 +01:00
4807448bb1 cyclicACMIPolyPatch: Clear geometry when resetting
Patch contributed by Mattijs Janssens
2016-06-17 11:50:56 +01:00
1319df48d9 Rationalized Doxygen documentation of command-line options 2016-06-17 09:11:58 +01:00
9cfccd2093 Simplify and correct Doxygen lists using '-' rather than '\li \c' 2016-06-16 20:10:39 +01:00
f885349921 Removed experimental code 2016-06-12 21:11:55 +01:00
83321bd4f7 functionObjects: renamed faceSource -> surfaceRegion, cellSource -> volRegion
The use of the term 'source' in the context of post-processing is
confusing and does not properly describe the process of region
selection.  The new names 'surfaceRegion' and 'volRegion' better
describe the purpose of the functionObjects which is to provide field
processing functionality limited to a specified region of space, either
a surface or volume.

The keyword 'source' is renamed 'regionType' which better describes the
purpose which is to specify the method by which the surface or volume
region is selected.

The keyword to select the name of the surface or volume region is
renamed from 'sourceName' to 'name' consistent with the other
name-changes above.
2016-06-12 20:56:51 +01:00
1be96a546c Added forward declaration of friend functions 2016-05-30 13:21:29 +01:00
fef82f935c Updated header 2016-05-30 08:31:21 +01:00
d438da1eb7 ACMI: Corrected conservation issue
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2057
2016-05-30 08:29:11 +01:00
3f608e95e6 Added forward declaration of friend functions 2016-05-30 08:28:35 +01:00
a4f8f589de Added forward declaration of friend functions 2016-05-29 22:28:37 +01:00
f5ce43069d functionObjects, foamCalcFunctions, fvOptions: Standardized keywords for selecting fields and objects
Generally fields and objects are selected using the 'field[s]' and
'object[s]' keywords but this was not consistent between all
functionObject, fvOptions etc. and now fixed by applying the following
renaming:

fieldName -> field
fieldNames -> fields
objectName -> object
objectNames -> objects
2016-05-21 20:15:21 +01:00
67de20df25 Further standardization of loop index naming: pointI -> pointi, patchI -> patchi 2016-05-18 21:20:42 +01:00
ce0cd35185 Patches contributed by Mattijs Janssens:
splitMeshRegions: handle flipping of faces for surface fields

subsetMesh: subset dimensionedFields

decomposePar: use run-time selection of decomposition constraints. Used to
    keep cells on particular processors. See the decomposeParDict in

$FOAM_UTILITIES/parallel/decomposePar:
  - preserveBaffles: keep baffle faces on same processor
  - preserveFaceZones: keep faceZones owner and neighbour on same processor
  - preservePatches: keep owner and neighbour on same processor. Note: not
    suitable for cyclicAMI since these are not coupled on the patch level
  - singleProcessorFaceSets: keep complete faceSet on a single processor
  - refinementHistory: keep cells originating from a single cell on the
    same processor.

decomposePar: clean up decomposition of refinement data from snappyHexMesh

reconstructPar: reconstruct refinement data (refineHexMesh, snappyHexMesh)

reconstructParMesh: reconstruct refinement data (refineHexMesh, snappyHexMesh)

redistributePar:
  - corrected mapping surfaceFields
  - adding processor patches in order consistent with decomposePar

argList: check that slaves are running same version as master

fvMeshSubset: move to dynamicMesh library

fvMeshDistribute:
  - support for mapping dimensionedFields
  - corrected mapping of surfaceFields

parallel routines: allow parallel running on single processor

Field: support for
  - distributed mapping
  - mapping with flipping

mapDistribute: support for flipping

AMIInterpolation: avoid constructing localPoints
2016-05-15 16:36:48 +01:00
3c053c2fe6 GeometricField: Renamed internalField() -> primitiveField() and dimensionedInternalField() -> internalField()
These new names are more consistent and logical because:

primitiveField():
primitiveFieldRef():
    Provides low-level access to the Field<Type> (primitive field)
    without dimension or mesh-consistency checking.  This should only be
    used in the low-level functions where dimensional consistency is
    ensured by careful programming and computational efficiency is
    paramount.

internalField():
internalFieldRef():
    Provides access to the DimensionedField<Type, GeoMesh> of values on
    the internal mesh-type for which the GeometricField is defined and
    supports dimension and checking and mesh-consistency checking.
2016-04-30 21:40:09 +01:00
450728ea84 Standardized cell, patch, face and processor loop index names 2016-04-25 12:00:53 +01:00
43beb06018 Standardized cell, patch and face loop index names 2016-04-25 10:28:32 +01:00
8c6fa81eba vector::zero -> Zero 2016-04-16 18:34:41 +01:00
6e573ad7e8 UList: Rationalize assignment (shallow-copy vs deep-copy)
//- Disallow default shallow-copy assignment
    //
    //  Assignment of UList<T> may need to be either shallow (copy pointer)
    //  or deep (copy elements) depending on context or the particular type
    //  of list derived from UList and it is confusing and prone to error
    //  for the default assignment to be either.  The solution is to
    //  disallow default assignment and provide separate 'shallowCopy' and
    //  'deepCopy' member functions.
    void operator=(const UList<T>&) = delete;

    //- Copy the pointer held by the given UList.
    inline void shallowCopy(const UList<T>&);

    //- Copy elements of the given UList.
    void deepCopy(const UList<T>&);
2016-04-03 10:26:05 +01:00
88bd912374 Pstream: optimisation of data exchange
Contributed by Mattijs Janssens.

1. Any non-blocking data exchange needs to know in advance the sizes to
   receive so it can size the buffer.  For "halo" exchanges this is not
   a problem since the sizes are known in advance but or all other data
   exchanges these sizes need to be exchanged in advance.

   This was previously done by having all processors send the sizes of data to
   send to the master and send it back such that all processors
   - had the same information
   - all could work out who was sending what to where and hence what needed to
     be received.

   This is now changed such that we only send the size to the
   destination processor (instead of to all as previously). This means
   that
   - the list of sizes to send is now of size nProcs v.s. nProcs*nProcs before
   - we cut out the route to the master and back by using a native MPI
     call

   It causes a small change to the API of exchange and PstreamBuffers -
   they now return the sizes of the local buffers only (a labelList) and
   not the sizes of the buffers on all processors (labelListList)

2. Reversing the order of the way in which the sending is done when
   scattering information from the master processor to the other
   processors. This is done in a tree like fashion. Each processor has a
   set of processors to receive from/ send to. When receiving it will
   first receive from the processors with the least amount of
   sub-processors (i.e. the ones which return first). When sending it
   needs to do the opposite: start sending to the processor with the
   most amount of sub-tree since this is the critical path.
2016-04-02 18:32:11 +01:00
eabb03aa2a faceZoneToCell: Corrected cell selection logic
Patch contributed by Mattijs Janssens
Resolved bug-report http://www.openfoam.org/mantisbt/view.php?id=2038
2016-04-01 16:59:51 +01:00
730f89dc9d Use Zero rather than pTraits<Type>::zero unless a static typed '0' is required 2016-03-22 17:46:52 +00:00
e57874859a Updated Doxygen documentation and files
Contributed by Bruno Santos
Resolves patch report http://www.openfoam.org/mantisbt/view.php?id=2023

Update online documentation http://openfoam.github.io/Documentation-dev/html/
2016-03-14 11:00:24 +00:00
7ba41e0095 Removed duplicate, inconsistent and spurious comments in .C files 2016-02-29 18:33:54 +00:00