Commit Graph

1502 Commits

Author SHA1 Message Date
7db2a29413 ENH: type aliases for common GeometricField forms (#2348)
ENH: provide fieldTypes::surface names (as per fieldTypes::volume)

ENH: reduce number of files for surface fields

- combine face and point field declarations/definitions,
  simplify typeName definitions
2022-02-10 19:28:50 +01:00
ddcc04dadc BUG: vtk write of uniform field in parallel (fixes #2349)
- used low-level MPI gather, but the wrapping routine contains an
  additional safety check for is_contiguous which is not defined for
  various std::pair<..> combination.

  So std::pair<label,vector> (which is actually contiguous, but not
  declared as is_contiguous) would falsely trip the check.

  Avoid by simply gathering unbundled values instead.
2022-02-10 16:46:13 +01:00
2919c9b675 STYLE: minor changes
- do not need STRINGIFY macros in ragel code
- remove wordPairHashTable.H and use equivalent wordPairHashes.H instead

STYLE: replace addDictOption with explicit option

 - the usage text is otherwise misleading

GIT: combine Pair/Tuple2 directories
2022-02-10 16:46:13 +01:00
62ec2f2ddf COMP: deprecate domainName and full hostName (#2280)
- unused in regular OpenFOAM code
- POSIX version uses deprecated gethostbyname()
- Windows version never worked

COMP: localize, noexcept on internal OSspecific methods

STYLE: support fileName::Type SYMLINK and LINK as synonyms
2022-02-10 16:46:12 +01:00
e1f06bf38e ENH: globalIndex gather ops with reduced communication (#2332)
- for contiguous data, added mpiGatherOp() to complement the
  gatherOp() static method

- the gather ops (static methods) populate the globalIndex on the
  master only (not needed on other procs) for reduced communication

- rename inplace gather methods to include 'inplace' in their name.
  Regular gather methods return the gathered data directly, which
  allows the following:

      const scalarField mergedWeights(globalFaces().gather(wghtSum));

  vs.
      scalarField mergedWeights;
      globalFaces().gather(wghtSum, mergedWeights());

  or even:

      scalarField mergedWeights;
      List<scalarField> allWeights(Pstream::nProcs());
      allWeights[Pstream::myProcNo()] = wghtSum;
      Pstream::gatherList(allWeights);
      if (Pstream::master())
      {
          mergedWeights =
              ListListOps::combine<scalarField>
              (
                  allWeights, accessOp<scalarField>()
              );
       }

- add parRun guards on various globalIndex gather methods
  (simple copies or no-ops in serial) to simplify the effort for callers.
2022-01-31 20:09:49 +01:00
ab065cd5d3 BUG: avoid memory slicing in LList (#2300)
ENH: reduce code effort for clearing linked-lists

ENH: adjust linked-list method name

- complement linked-list append() method with prepend() method
  instead of 'insert', which is not very descriptive
2022-01-31 20:08:52 +01:00
a2014242cf RELEASE: Updated headers for v2112 2021-12-20 14:18:01 +00:00
e09298092d ENH: support negated regular expressions (#2283)
- extendes the prefix syntax to handle '!' values.

  For example,  "(?!).*processor.*" or "(?!i)inlet.*"
2021-12-03 17:10:22 +01:00
fc6239d96e ENH: add expression support for scalar/vector expression lookups
- similar idea to swak timelines/lookuptables but combined together
  and based on Function1 for more flexibility.

  Specified as 'functions<scalar>' or 'functions<vector>'.
  For example,

  functions<scalar>
  {
      intakeType table ((0 0) (10 1.2));

      p_inlet
      {
          type        sine;
          frequency   3000;
          scale       50;
          level       101325;
      }
  }

  These can be referenced in the expressions as a nullary function or a
  unary function.

  Within the parser, the names are prefixed with "fn:" (function).
  It is thus possible to define "fn:sin()" that is different than
  the builtin "sin()" function.

     * A nullary call uses time value
       - Eg, fn:p_inlet()

     * A unary call acts as a remapper function.
       - Eg, fn:intakeType(6.25)
2021-11-26 12:24:35 +01:00
e6697edb52 ENH: robuster lemon parsing
- previously simply reused the scan token, which works fine for
  non-nested tokenizations but becomes too fragile with nesting.

  Now changed to use tagged unions that can be copied about
  and still retain some rudimentary knowledge of their types,
  which can be manually triggered with a destroy() call.

- provide an 'identifier' non-terminal as an additional catch
  to avoid potential leakage on parsing failure.

- adjust lemon rules and infrastructure:

  - use %token to predefine standard tokens.
    Will reduce some noise on the generated headers by retaining the
    order on the initial token names.

  - Define BIT_NOT, internal token rename NOT -> LNOT

- handle non-terminal vector values.
  Support vector::x, vector::y and vector::z constants

- permit fieldExpr access to time().
  Probably not usable or useful for an '#eval' expression,
  but useful for a Function1.

- provisioning for hooks into function calls. Establishes token
  names for next commit(s).
2021-11-26 12:24:35 +01:00
1804d3fed5 ENH: additional #word and #message dictionary directives (#2276)
- use `#word` to concatenate, expand content with the resulting string
  being treated as a word token. Can be used in dictionary or
  primitive context.

  In dictionary context, it fills the gap for constructing dictionary
  names on-the-fly. For example,

  ```
  #word "some_prefix_solverInfo_${application}"
  {
      type    solverInfo;
      libs    (utilityFunctionObjects);
      ...
  }
  ```

  The '#word' directive will automatically squeeze out non-word
  characters. In the block content form, it will also strip out
  comments. This means that this type of content should also work:

  ```
  #word {
     some_prefix_solverInfo
     /* Appended with application name (if defined) */
     ${application:+_}  // Use '_' separator
     ${application}     // The application
  }
  {
      type    solverInfo;
      libs    (utilityFunctionObjects);
      ...
  }
  ```
  This is admittedly quite ugly, but illustrates its capabilities.

- use `#message` to report expanded string content to stderr.
  For example,

  ```
  T
  {
     solver          PBiCG;
     preconditioner  DILU;
     tolerance       1e-10;
     relTol          0;
     #message "using solver: $solver"
  }
  ```
  Only reports on the master node.
2021-11-25 17:05:37 +01:00
fbd7b78999 ENH: make expressions::FieldAssociation a common enum
- use FACE_DATA (was SURFACE_DATA) for similarity with polySurface

ENH: add expression value enumerations and traits

- simple enumeration of standard types (bool, label, scalar, vector)
  that can be used as a value type-code for internal bookkeeping.

GIT: relocate pTraits into general traits/ directory
2021-11-23 12:53:45 +01:00
39d244ad91 ENH: add check for isTimeDb() into objectRegistry
- add missing time() into pointMesh

STYLE: use static_cast instead of dynamic_cast for Time -> objectRegistry
2021-11-17 19:52:33 +01:00
92d52243af ENH: support cref() and shallow copies (refPtr and tmp)
- enables building HashTables with shadowed variables

- support good() and valid() as synonyms in memory classes
2021-11-17 16:04:40 +01:00
28800dcbbc LINT: fix permissions 2021-11-15 21:22:36 +01:00
effd69a005 ENH: add refPtr release() method
- releases ownership of the pointer. A no-op (and returns nullptr)
  for references.

  Naming consistent with unique_ptr and autoPtr.

DOC: adjust wording for memory-related classes

- add is_const() method for tmp, refPtr.

  Drop (ununsed and confusing looking) isTmp method from refPtr
  in favour of is_pointer() or movable() checks

ENH: noexcept for some pTraits methods, remove redundant 'inline'

- test for const first for tmp/refPtr (simpler logic)
2021-11-15 19:34:01 +01:00
5a121119e6 ENH: add -verbose support into argList
- similar to -dry-run handling, can be interrogated from argList,
  which makes it simpler to add into utilities.

- support multiple uses of -dry-run and -verbose to increase the
  level. For example, could have

    someApplication -verbose -verbose

 and inside of the application:

    if (args.verbose() > 2) ...

BUG: error with empty distributed roots specification (fixes #2196)

- previously used the size of distributed roots to transmit if the
  case was running in distributed mode, but this behaves rather poorly
  with bad input. Specifically, the following questionable setup:

      distributed true;
      roots ( /*none*/ );

  Now transmit the ParRunControl distributed() value instead,
  and also emit a gentle warning for the user:

      WARNING: running distributed but did not specify roots!
2021-11-09 15:44:54 +01:00
c9333a5ac8 ENH: improve flexibility of error, messageStream output
- provide a plain stream() method on messageStream to reduce reliance
  on casting operators and slightly opaque operator()() calls etc

- support alternative stream for messageStream serial output.
  This can be used to support local redirection of output.
  For example,

     refPtr<OFstream> logging;   // or autoPtr, unique_ptr etc

     // Later...
     Info.stream(logging.get())
        << "Detailed output ..." << endl;

  This will use the stdout semantics in the normal case, or allow
  redirection to an output file if a target output stream is defined,
  but still effectively use /dev/null on non-master processes.

  This is mostly the same as this ternary

      (logging ? *logging : Info())

  except that the ternary could be incorrect on sub-processes,
  requires more typing etc.

ENH: use case-relative names of dictionary, IOstream for FatalIOError

- normally yields more easily understandable information
2021-11-03 11:46:13 +01:00
851be8ea33 ENH: use consistent naming when toggling exception throwing on/off 2021-11-02 21:14:41 +01:00
b6539cd02e ENH: additional MPI gather/scatter routines, globalIndex gather methods
- UPstream::mpiGather (MPI_Gather)   - used by Pstream::listGatherValues
- UPstream::mpiScatter (MPI_Scatter) - used by Pstream::listScatterValues

  These are much simpler forms for gather/scatter of fixed-sized
  contiguous types data types (eg, primitives, simple pairs etc).

  In the gather form, creates a list of gathered values on the master
  process. The subranks have a list size of zero.

  Similarly, scatter will distribute a list of values to single values
  on each process.

  Instead of

      labelList sendSizes(Pstream::nProcs());
      sendSizes[Pstream::myProcNo()] = sendData.size();
      Pstream::gatherList(sendSizes);

  Can write

      const labelList sendSizes
      (
          UPstream::listGatherValues<label>(sendData.size())
      );

  // Less code, lower overhead and list can be const.

  For scattering an individual value only,
  instead of

      labelList someValues;
      if (Pstream::master()) someValues = ...;

      Pstream::gatherList(sendSizes);
      const label localValue
      (
          someValues[Pstream::myProcNo()]
      );

  Can write

      labelList someValues;
      if (Pstream::master()) someValues = ...;

      Pstream::gatherList(sendSizes);
      const label localValue
      (
          UPstream::listScatterValues<label>(someValues)
      );

   Can of course also mix listGatherValues to assemble a list on master
   and use Pstream::scatterList to distribute.

ENH: adjusted globalIndex gather methods

- added mpiGather() method [contiguous data only] using MPI_Gatherv

- respect localSize if gathering master data to ensure that a
  request for 0 master elements is properly handled.
2021-10-29 17:04:52 +02:00
b8a4b7e80d ENH: additional 'nocopy' methods for List resize/reserve methods
- the size of a List often requires adjustment prior to an operation,
  but old values (if any) are not of interest and will be overwritten.

  In these cases can use the _nocopy versions to avoid additional memory
  overhead of the intermediate list and the copy/move overhead of
  retaining the old values (that we will subsequently discard anyhow).

  No equivalent for PtrList/UPtrList - this would be too fragile.

- add swap DynamicField with DynamicList

BUG: fixed Dynamic{Field,List} setCapacity corner case

- for the case when the newly requested capacity coincides with the
  current addressable size, the resize of the underlying list would have
  been bypassed - ie, the real capacity was not actually changed.

- remove (unused) PtrDynList setCapacity method as too fragile
2021-10-29 17:04:51 +02:00
e2861cc200 ENH: return UList range slice as a SubList
- previously returned the range slice as a UList,
  but this prevents convenient assignment.
  Apply similar handling for Field/SubField

  Allows the following

     labelRange range(...);
     fullList.slice(range) = identity(range.size());

  and

     fullList.slice(range) = UIndirectList<T>(other, addr);

ENH: create SubList from full FixedList (simplifies interface)

- allow default constructed SubList. Use shallowCopy to 'reset' later
2021-10-29 17:04:51 +02:00
2a2edf5fee ENH: Added contact resistance to multi-world. See #1535.
- added contact resistance to turbulentTemperatureCoupledBaffleMixed
- added basic multi-world to turbulentTemperatureRadCoupledMixed
- added unit-testcase to $FOAM_APP/test/multiWorld
2021-10-18 19:22:23 +01:00
7ad75fa18e ENH: add single-parameter PtrListOps::names (ie, no name filtering)
ENH: adjust fileName component method

- the location \c npos returns the last component
2021-10-12 10:11:05 +02:00
a0d7933360 ENH: support vtu mesh subsetting, creation from cellShapes
- support simple mesh subsetting to vtu formats to enable debug output
  for a subsection of an existing polyMesh

- rudimentary support for VTK from cellShapes is intended for handling
  basic primitive cell shapes without a full blown polyMesh description.

  For example,

     // Create an empty polyMesh with points only
     polyMesh debugMesh
     (
         io,
         std::move(points),
         faceList(),     // faces
         labelList(),    // owner
         labelList(),    // neighbour
         true            // syncPar
     );

    // Establish the appropriate VTK sizing for the TET shapes
    vtk::vtuCells vtuCells;
    vtuCells.resetShapes(debugCutTets);
    vtuCells.nPoints(debugMesh.nPoints());

  NOTE
  Since the vtk::internalMeshWriter only uses the polyMesh reference
  for the points, it is also possible to create the vtuCells
  description without a pointField (or from a different mesh
  description) and write out the connectivity using the pointField
  from a different mesh.
2021-09-27 13:26:02 +02:00
5e4d678c98 ENH: make precision adaptors modifiable (#2173)
- allows reuse similar to refPtr for wrapping different content.

- additional control for when contents are copied back,
  instead of waiting for the adaptor to go out of scope.

  Eg,

  if (adaptor.active())
  {
      adaptor.commit();
      adaptor.clear();
  }

- static ConstPrecisionAdaptor::get method renamed to 'select' as a
  better description of its purpose and avoid confusion with
  non-static 'get' method.

  Was previously only used within GAMGPreconditioner, but even there
  it is better just to use the ConstPrecisionAdaptor directly.
2021-09-07 11:29:11 +02:00
9d26b25c46 TUT: multi-world tutorial setup with circular connectivity 2021-07-28 16:21:14 +02:00
5b09e59b3f ENH: support direct specification of coordinate rotation "none"
- Can specify
  ```
  transform
  {
      origin      (1 2 3);
      rotation    none;
  }
  ```
  instead of the longer form
  ```
  transform
  {
      origin      (1 2 3);
      e1          (1 0 0);
      e3          (0 0 1);
  }
  ```

COMPAT: remove old (pre-1812) Euler and STARCD keywords

- use "angles", remove old compat name "rotation"
  as clutter and possible confusion with "coordinate rotation"

STYLE: remove coordinate rotation move constructors

- an unnecessary holdover from older code.
2021-07-28 10:02:27 +02:00
db9460f0bc ENH: copy construct FixedList from fixed subset of input
- remove construct from two iterators (#2083)
2021-07-15 16:47:27 +02:00
aca366d293 TUT: replace remaining templated thermoType
TUT: some simplification for multiWorld test

STYLE: remove some editor junk
2021-07-15 16:47:22 +02:00
cc5aa20931 ENH: simplify exit/abort handling and jobinfo (code reduction)
- handle failures more robustly
- add static shutdown() for similarity with Pstream etc.
2021-07-05 14:55:48 +02:00
8a1f667067 COMP: cannot resolve read in UnsortedMeshedSurface constructor
- fix linkage for cellModeller compat methods
2021-07-05 14:55:37 +02:00
8884d58a52 STYLE: fix/correct some tests. Remove useless tests 2021-07-05 14:55:37 +02:00
6a390f6ad1 COMP: remove includes of defunct locations (fixes #2143) 2021-06-29 13:43:44 +02:00
e3796745ed CONFIG: Updated headers to v2106
Minor clean-up
2021-06-28 09:14:42 +01:00
096b9dc52e TUT: add parallel version for various squareBend cases
- adjust commented-out evaluation to avoid warnings.

  With code like this
  ```
  #if 0
  nxin    #eval{ round($nxin / 5) };
  #endif
  ```

  The handling of the "#if 0 / #endif" clause uses the plain ISstream
  parser to tokenize. This means that the "round(" is parsed as a word
  with a mismatched closing ')', whereas the "#eval" parser will slurp
  everything in until the closing brace and send it off as a string
  to the expression parser.
2021-06-18 17:14:22 +02:00
ae02a86562 ENH: multi-region support for reconstructParMesh (#2072) 2021-06-11 17:18:35 +02:00
6120e13d29 ENH: add tmp/refPtr support for setting cref/ref from pointer
- makes it easier to use for local or alternative storage.
  Eg,

  ```
      tmp<volScalarField> tfld;

      tfld.cref(obj.cfindObject<volScalarField>("name"));

      if (!tfld)
      {
          tfld = volScalarField::New("name", ...);
      }
  ```
2021-06-08 14:01:08 +02:00
0ba43df9c5 STYLE: remove erroneous reference in dynamicCast use 2021-05-31 09:11:49 +02:00
2990b14d89 ENH: add more direct methods for getting meshEdge (PrimitivePatch)
- refine definition of patch boundary faces to distinguish between
  boundaryFaces() and uniqBoundaryFaces().

  * boundaryFaces() for edge to face lookup on boundary edges.
  * uniqBoundaryFaces() for accessing quantities such as face areas
    or eroding an outer layer

ENH: LabelledItem container, replaces unused 'Keyed' container

- method names in alignment with objectHit, pointIndexHit etc.
  Top-level name aligns with labelledTri.
2021-05-27 15:42:46 +02:00
0df219d1b3 ENH: expose decomposePar -dry-run options -domains, -method
- can now drop older Test-decomposePar for exploration purposes
  and simply use -dry-run with the -domains and -method options.

- write VTK file instead of volScalarField in combination
  with -dry-run and -cellDist.

  Avoids adding any OpenFOAM fields and is usually faster to load.
  Also easier to rename than a volScalarField would be when exploring
  multiple decompositions.
2021-05-19 18:16:05 +02:00
2dbabb242b ENH: namedDictionary for managing keyword/dictionary combinations
- reworked from the openfoam.org wordAndDictionary version.

Allows, for example, named entries in topoSet.
2021-05-19 17:13:24 +02:00
c9fda67b5f ENH: refactor function arg splitting -> stringOps::splitFunctionArgs 2021-05-19 16:20:12 +02:00
efd1ac4b5f ENH: adjust token in preparation for separate expression tokenization
- minor simplification of #if/#endif handling

ENH: improve input robustness with negative-prefixed expansions (#2095)

- especially in blockMeshDict it is useful to negate an value directly.
  Eg,
  ```
     xmax  100;
     xmin  -$xmax;
  ```
  However, this fails since the dictionary expansion is a two-step
  process of tokenization followed by expansion. After the expansion
  the given input would now be the following:
  ```
     xmax  100;
     xmin  - 100;
  ```
  and retrieving a scalar value for 'xmin' fails.

  Counteract this by being more generous on tokenized input when
  attempting to retrieve a label or scalar value.
  If a '-' is found where a number is expected, use it to negate the
  subsequent value.

  The previous solution was to invoke an 'eval':
  ```
     xmax  100;
     xmin  #eval{-$xmax};
  ```
  which adds additional clutter.
2021-05-18 15:30:00 +02:00
2a438385a3 STYLE: make polyMesh constructor explicit
- use polyMesh::defaultRegion instead of fvMesh::defaultRegion and
  others via static inheritance. (92 vs ~25 occurrences)
2021-05-12 11:24:57 +02:00
3bc8ab2839 ENH: improve PrimitivePatch access for edges
- return internalEdges() and boundaryEdges() sub lists directly

- calculate and return boundaryFaces() to identify faces attached to
  boundary edges.

- minor code cleanup, and add PrimitivePatchBase class for
  non-templated code.

STYLE: mark unused parameter in globalMeshData mergePoints
2021-05-12 11:24:57 +02:00
ea2bf72740 ENH: support gather of indirect list via globalIndex 2021-05-12 11:24:57 +02:00
17e6a14773 ENH: improve support for assignment from indirect list
- copy assignment from indirect list to SubList and Field
2021-05-12 11:24:57 +02:00
40567b844a DEFEATURE: remove construct List from two iterators (#2083)
- this constructor was added for similarity with std::vector,
  but continues to cause various annoyances.

  The main problem is that the templated parameter tends to grab
  anything that is not a perfect match for other constructors.

  Typically seen with two integers (in 64-bit mode), but various other
  cases as well.

  If required, the ListOps::create() function provides a lengthier
  alternative but one that can also incorporate transformations.
  Eg,

      pointField pts = ....;

      List<scalar> mags
      (
          List<scalar>::create
          (
              pts.begin(),
              pts.end(),
              [](const vector& v){ return magSqr(v); }
      );
2021-05-12 11:24:57 +02:00
8eef91c5e2 ENH: improve edge access for face/triFace
- additional rcEdge(), rcEdges() methods for reverse order walk

- accept generic edge() method as alternative to faceEdge() for
  single edge retrieval.

- edge() method with points -> returns the vector

- reduce the number of operations in edgeDirection methods

DEFEATURE: remove longestEdge global function

- deprecated and replaced by face::longestEdge() method (2017-04)
2021-05-12 11:24:57 +02:00