Commit Graph

7697 Commits

Author SHA1 Message Date
59b1cf080e ENH: Tensor/SymmTensor: add devSymm and devTwoSymm funcs to avoid intermediates 2023-05-15 17:05:10 +01:00
783934ccad ENH: add global topology check in checkMesh and makeFaMesh (#2771)
- detect when boundary patches are multiply connected across edges

STYLE: initialize some faMesh values
2023-05-09 19:30:58 +02:00
31600c96d4 ENH: output finiteArea patchID with foamToVTK -with-ids
- can be quite useful for debugging/orientation with complex
  geometries
2023-05-09 19:30:58 +02:00
f462a850ce ENH: added polyBoundaryMesh patchID(meshFacei) method
- this complements the whichPatch(meshFacei) method [binary search]
  and the list of patchID() by adding internal range checks.

  eg,
     Before
     ~~~~~~
     if (facei >= mesh.nInternalFaces() && facei < mesh.nFaces())
     {
         patchi = pbm.patchID()[facei - mesh.nInternalFaces()];
         ...
     }

     After
     ~~~~~
     patchi = pbm.patchID(facei);

     if (patchi >= 0)
     {
         ...
     }
2023-05-09 19:30:58 +02:00
8e32db2b5f STYLE: more explicit use of REGISTER when storing fields
ENH: add phaseScopedName convenience method

- unites IOobject::scopedName + phasePropertyName
2023-05-09 19:30:57 +02:00
16591012e9 ENH: add -verbose option to surface conversion, cleanup
- by default, reduce the amount of output

ENH: support default text description for -verbose option

- simplifies use in more places.
2023-05-09 19:30:57 +02:00
2eb1f5678d ENH: use Improbe/Mrecv for NBX size exchange
- retains the queried message without secondary polling.
  Purported to be slightly faster. Better thread-safety.
2023-05-09 14:51:43 +02:00
639b800049 ENH: clearer separation of MPI initialize/finalize stages (#2774)
ENH: support transfer from a wrapped MPI request to global list

- allows coding with a list UPstream::Request and subsequently either
  retain that list or transfer into the global list.
2023-05-09 14:51:43 +02:00
e967305ef2 STYLE: use calculatedType() and zeroGradientType() methods 2023-05-02 13:34:12 +02:00
ee39e3d276 STYLE: use explicit REGISTER option when storing fields 2023-04-25 13:45:08 +02:00
ce282dfbbf ENH: correct the selfComm procNo relative to world communicator
STYLE: qualify worldComm as UPstream instead Pstream

STYLE: PPCG::gSumMagProd() as static function
2023-04-24 15:46:04 +02:00
5042d1296f ENH: consistent UniformDimensionedField naming
- construct from components, or use word::null to ensure
  consistent avoid naming between IOobject vs dimensioned type.

- support construct with parameter ordering as per DimensionedField

ENH: instantiate a uniformDimensionedLabelField

- eg, for registering standalone integer counters
2023-04-24 15:46:04 +02:00
2b1061420c STYLE: remove trailing space, tabs 2023-04-24 15:37:33 +02:00
7bef18a274 STYLE: document const-ness of isA, refCast 2023-04-21 15:49:27 +02:00
80bc1db5b7 ENH: provide UPstream intra-host and inter-host communicators
- simplifies communication structuring with intra-host communication.
  Can be used for IO only, or for specialised communication.

  Demand-driven construction. Gathers the SHA1 of host names when
  determining the connectivity. Internally uses an MPI_Gather of the
  digests and a MPI_Bcast of the unique host indices.

  NOTE:
    does not use MPI_Comm_splt or MPI_Comm_splt_type since these
    return MPI_COMM_NULL on non-participating process which does not
    easily fit into the OpenFOAM framework.

    Additionally, if using the caching version of
    UPstream::commInterHost() and UPstream::commIntraHost()
    the topology is determined simultaneously
    (ie, equivalent or potentially lower communication).
2023-04-18 14:08:39 +02:00
9d3427e0b4 ENH: consolidate UPstream::commsStruct code
- make sizing of commsStruct List demand-driven as well
  for more robustness, fewer unneeded allocations.

- fix potential latent bug with allBelow/allNotBelow for proc 0
  (linear communication).

ENH: remove unused/unusable UPstream::communicator optional parameter

- had constructor option to avoid constructing the MPI backend,
  but this is not useful and inconsistent with what the reset or
  destructor expect.

STYLE: local use of UPstream::communicator

- automatically frees communicator when it leaves scope
2023-04-18 14:08:39 +02:00
b277b913cf ENH: add guards for partially populated communicators
- these are primarily when encountering sparse (eg, inter-host)
  communicators. Additional UPstream convenience methods:

  is_rank(comm)
    => True if process corresponds to a rank in the communicators.
       Can be a master rank or a sub-rank.

  is_parallel(comm)
    => True if parallel algorithm or exchange is used on the process.
       same as

           (parRun() && (nProcs(comm) > 1) && is_rank(comm))
2023-04-18 14:08:39 +02:00
a96dcf706b ENH: robuster handling of inv() of fields with singular tensors (#2724)
- replace the "one-size-fits-all" approach of tensor field inv()
  with individual 'failsafe' inverts.

  The inv() field function historically just checked the first entry
  to detect 2D cases and adjusted/readjusted *all* tensors accordingly
  (to avoid singularity tensors and/or noisy inversions).

  This seems to have worked reasonably well with 3D volume meshes, but
  breaks down for 2D area meshes, which can be axis-aligned
  differently on different sections of the mesh.
2023-04-18 13:59:09 +02:00
09dd913077 ENH: use primitive fields when calculating triSurface fields (#2758) 2023-04-13 20:54:50 +02:00
d826f9259f ENH: properly trap any sub-rank changes in allocatePstreamCommunicator
- not currently used, but it is possible that communicator allocation
  modifies the list of sub-ranks. Ensure that the correct size is used
  when (re)initialising the linear/tree structures.

STYLE: adjust MPI test applications

- remove some clutter and unneeded grouping.
  Some ideas for host-only communicators
2023-04-08 18:33:52 +02:00
475ed5cc32 STYLE: readOnProc/writeOnProc instead of 'valid' for IO 2023-04-04 15:04:26 +02:00
87eed5e3b8 ENH: place more patch field attributes under template invariant Base
- attributes such as assignable(), coupled() etc

- common patchField types: calculatedType(), zeroGradientType() etc.
  This simplifies reference to these types without actually needing a
  typed patchField version.

ENH: add some basic patchField types to fieldTypes namespace

- allows more general use of the names

ENH: set extrapolated/calculated from patchInternalField directly

- avoids intermediate tmp
2023-04-03 13:33:56 +02:00
4994456a28 ENH: add 2D det() / inv() methods for Tensor/SymmTensor (#2724)
- for cases where a 3D tensor is being used to represent 2D content,
  the determinant is zero. Can use inv2D(excludeDirection) to compensate
  and invert as if it were only 2D.

ENH: consistent definitions for magSqr of symmTensors, diagSqr() norm

COMP: return scalar not component type for magSqr

- had inconsistent definitions with SymmTensor returning the component
  type and Tensor returning scalar. Only evident with complex.
2023-03-23 10:31:54 +01:00
25bc7d65f7 STYLE: prefer REGISTER/NO_REGISTER instead of true/false for IOobject
- self-documenting
2023-03-10 14:16:32 +00:00
20566a87f5 ENH: provide getter/setter interface to standard communicators
- similar to UPstream::parRun(), the setter returns the previous value.

  The accessors are prefixed with 'comm':
  Eg, commGlobal(), commWarn(), commWorld(), commSelf().
  This distinguishes them from any existing variables (eg, worldComm)
  and arguably more similar to MPI_COMM_WORLD etc...

  If demand-driven communicators are added in the future, the function
  call syntax can help encapsulate that.

  Previously:

      const label oldWarnComm = UPstream::warnComm;
      const label oldWorldComm = UPstream::worldComm;
      UPstream::warnComm = myComm;
      UPstream::worldComm = myComm;
      ...

      UPstream::warnComm = oldWarnComm;
      UPstream::worldComm = oldWorldComm;

  Now:
      const label oldWarnComm = UPstream::commWarn(myComm);
      const label oldWorldComm = UPstream::commWorld(myComm);
      ...

      UPstream::commWarn(oldWarnComm);
      UPstream::commWorld(oldWorldComm);

STYLE: check (warnComm >= 0) instead of (warnComm != -1)
2023-03-09 16:01:04 +00:00
b17422ef1a ENH: use readValueEntry, readMixedEntries for simpler program control 2023-03-08 15:30:04 +00:00
820f93c3b4 ENH: simplify box mesh construction (PDRblockMesh)
ENH: construct or reset boundBox from zero_one for a 0-1 unit cube

ENH: add some testing timings (for !596 and #2715)
2023-03-03 16:23:42 +01:00
d5c0852de1 ENH: improve diagnostic fields for checkFaMesh -write-vtk
ENH: support VTK output of procIDs for point data for some writers

TUT: areaWrite for drippingChair
2023-03-02 20:50:52 +01:00
f75af788c1 ENH: add factory method readContents to IO containers
- useful when regular contents are to be read via an IOobject and
  returned.

  Eg,  dictionary propsDict(IOdictionary::readContents(dictIO));
  vs.  dictionary propsDict(static_cast<dictionary&&>(IOdictionary(dictIO)));

  Commonly these would have simply been constructed directly as the
  IO container:

  eg,  IOdictionary propsDict(dictIO);

  However, that style may not ensure proper move semantics for return
  types.

  Now,
  =====
      labelList decomp(labelIOList::readContents(io));
      ... something
      return decomp;
  =====

  Previously,
  =====
      labelIOList decomp(io);

      // Hope for the best...
      return decomp;

      // Or be explicit and ensure elision occurs...
      return labelList(std::move(static_cast<labelList&>(decomp)));
  =====

  Note:
       labelList list(labelIOList(io));

       looks like a good idea, but generally fails to compile
2023-02-28 15:43:26 +01:00
9729617ae3 ENH: PtrList iterate over non-null entries (#2702)
- the iterator/const_iterator now skip any nullptr entries,
  which enables the following code to work even if the PtrList
  contains nullptr:

  for (const auto& intf : interfaces)
  {
      // Do something
      ...
  }

- this is a change in behaviour compared to OpenFOAM-v2212 and earlier,
  but is non-breaking:
  * Lists without null entries will traverse exactly as before.
  * Lists with null entries will now traverse correctly without
    provoking a FatalError.
2023-02-27 20:03:02 +01:00
afee861af9 DEFEATURE: remove PtrList random access iterators (#2702)
- random access was unused.
  Retaining it would impede reimplementing iterators to only iterate
  across non-null items.
2023-02-27 20:03:02 +01:00
0ab0ecb541 ENH: change refCount (internal) from count() to use_count()
- allows unambiguous of count() for other classes.
  Naming as per std::shared_ptr.

STYLE: qualify use_count() and unique() methods with the refCount base

- clearer/consistent meaning
2023-02-27 20:03:02 +01:00
117173aaba ENH: use min/max instead of first/last for int/slice ranges
- consistent with MinMax tuple etc.
- cull unused before(), after() methods
2023-02-27 15:41:25 +01:00
b33b26ad34 STYLE: replace zero::null usage with zero
- the null output adapter was previously used for the HashTables API
  when HashSet actually stored key/value. Now that the node only
  contains the key, having suppressed output is redundant, as is the
  zero::null class (reduces clutter)

STYLE: replace one::minus dispatch in extendedEdgeMesh

GIT: remove Foam::nil typedef (deprecated since May-2017)
2023-02-27 15:41:25 +01:00
cdcbd05587 COMP: resolve clamp() float/double ambiguity (SPDP compilation)
- pass by value instead of reference, add functional casts in some
  places. Can still rely on integer promotions though.

  OK:   clamp(value, 2, 20)   ==> (float, int, int)
  OK:   clamp(value, scalar(2), scalar(20))  ==> (float, float, float)
  NOK:  clamp(value, 2.0, 20) ==> (float, double, int)
2023-02-27 15:41:25 +01:00
28b492bd54 ENH: unroll loops for complexVector functions
STYLE: prefer STL naming real(), imag() instead of Re(), Im()
2023-02-27 15:41:25 +01:00
f0a196a908 STYLE: include primitivePatch.H (instead of PrimitivePatch.H)
- further de-clutter in the future

ENH: PrimitivePatchInterpolation with unique_ptr for memory management
2023-02-27 15:41:25 +01:00
e623e6a865 STYLE: favour include word.H instead of string.H
- in many places the string.H include is redundant anyhow.
  May wish to change to foamString.H (or equiv) in the future
2023-02-27 15:41:25 +01:00
d88272f031 ENH: relocate zero_one to pTraits, allows reuse for scalar clamping
ENH: add pTraits and IO for std::int8_t

STYLE: cull some implicitly available includes

- pTraits.H is included by label/scalar etc
- zero.H is included by UList

STYLE: cull redundant forward declarations for Istream/Ostream
2023-02-27 15:41:25 +01:00
d006339c9a ENH: remove restricted precision for calc/eval (#2635)
- in earlier versions: used 'fixed' notation
  to force floating point numbers to be printed with at least
  some decimal digits. However, in the meantime we are more
  flexible with handling float/int input so remove this constraint.

- use ITstream::toString, which makes the string expansion of ${var}
  and the expression expansion of $[var] consistent.
2023-02-21 14:20:02 +01:00
68bbd8f3a8 Merge remote-tracking branch 'origin/master' into develop 2023-02-21 10:21:31 +01:00
1cc72ea7e3 STYLE: use clamp/clamp_range instead of min(max(..., upper), lower) 2023-02-21 10:10:43 +01:00
ba6667a344 STYLE: use clamp/clamp_range instead of max(min(..., upper), lower) 2023-02-21 10:10:43 +01:00
e1a710014c ENH: define lerp field functions
- defined for lerp between two fields,
  either with a constant or a field of interpolation factors.

  * plain Field, DimensionedField, FieldField, GeometricFields

- using a field to lerp between two constants is not currently
  supported
2023-02-21 10:05:27 +01:00
ab10b4a05c EHN: add FieldFunction interface for 0/1 clamping
- enables clamp(field, zero_one{}) returning a tmp Field
2023-02-21 10:05:27 +01:00
3d8a6a5433 ENH: use GeometricField clamp_min, clamp_max, clamp_range
- newer naming allows for less confusing code.
  Eg,
      max(lower)  ->  clamp_min(lower)
      min(upper)  ->  clamp_max(upper)

- prefer combined method, for few operations.
  Eg,
      max(lower) + min(upper) -> clamp_range(lower, upper)

  The updated naming also helps avoid some obvious coding errors.
  Eg,

     Re.min(1200.0);
     Re.max(18800.0);

  instead of
     Re.clamp_range(1200.0, 18800.0);

- can also use implicit conversion of zero_one to MinMax<Type> for
  this type of code:

      lambda_.clamp_range(zero_one{});
2023-02-21 10:05:26 +01:00
4d7180ae7c COMP: rename field methods clamp() -> clamp_range()
- this is slightly longer to write (but consistent with clamp_min
  etc). The main reason is that this allows easier use of the clamp()
  free function.

STYLE: skip checks for bad/invalid clamping ranges

- ranges are either already validated before calling, the caller logic
  has already made the branching decision.
2023-02-21 10:05:26 +01:00
0767e21d8c ENH: more consistent convenience macros for creating patchFields 2023-02-20 11:18:29 +01:00
fe4688c27f ENH: patch fields writeValueEntry method (frequently used)
- add base-level readValueEntry, readMixedEntries methods
  that allow optional or mandatory reading.

STYLE: wording for patch fields comments
2023-02-20 11:13:43 +01:00
fb69a54bc3 ENH: avoid prior communication when using mapDistribute
- in most cases can simply construct mapDistribute with the sendMap
  and have it take care of communication and addressing for the
  corresponding constructMap.

  This removes code duplication, which in some cases was also using
  much less efficient mechanisms (eg, combineReduce on list of
  lists, or an allGatherList on the send sizes etc) and also
  reduces the number of places where Pstream::exchange/exchangeSizes
  is being called.

ENH: reduce communication in turbulentDFSEMInlet

- was doing an allGatherList to populate a mapDistribute.
  Now simply use PstreamBuffers mechanisms directly.
2023-02-14 23:22:55 +01:00