Commit Graph

15257 Commits

Author SHA1 Message Date
e2336fefd3 checkMesh: Added writing of faceSets and cellSets containing errors
In parallel the sets are reconstructed. e.g.

mpirun -np 6 checkMesh -parallel -allGeometry -allTopology -writeSets vtk

will create a postProcessing/ folder with the vtk files of the
(reconstructed) faceSets and cellSets.

Also improved analysis of disconnected regions now also checks for point
connectivity with is useful for detecting if AMI regions have duplicate
points.

Patch contributed by Mattijs Janssens
2016-06-12 20:51:07 +01:00
326b646bb8 Allwmake -update: Further improvements to handle source-tree/dep file inconsistencies after git pull
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2091
2016-06-11 16:28:40 +01:00
0f4df0150a functionObjects: 'valueOutput' -> 'writeFields' 2016-06-11 15:25:00 +01:00
55782e2868 foamList: Updated handling of switches and removed the '-redundant' option which does not work 2016-06-11 15:24:01 +01:00
c8188265f1 foamDebugSwitches -> foamList -debug 2016-06-10 13:34:58 +01:00
603e34d514 UOPstream: corrected write(const char* str)
Resolved bug-report http://bugs.openfoam.org/view.php?id=2115
2016-06-10 13:33:40 +01:00
079a024374 functionObjects::fieldValue: Added support for 'field' entry
Added patchIntegrate configuration
2016-06-10 10:37:37 +01:00
4b5905e535 functionObjects::writeRegisteredObject -> functionObjects::writeObjects
Added configuration file etc/caseDicts/postProcessing/fields/writeObjects
2016-06-10 08:28:13 +01:00
6d5db96ad9 ENH: subdict output with leading name (issue #255)
- Introduce dictionary::writeEntries for better code-reuse.

  Before
  ======
      os << nl << indent << "name";
      dict.write(os);

  After
  =====
      dict.write(os, "name");
2016-06-09 18:33:56 +01:00
657c2909ed createTurbulenceFields: utility replaced by 'turbulenceFields' functionObject used with the '-postProcess' option 2016-06-09 17:17:19 +01:00
0f5b4f3c49 functionObjects: Corrected docs 2016-06-09 16:29:06 +01:00
6a03830b05 R: utility replaced by functionObject used with the '-postProcess' option 2016-06-09 16:28:30 +01:00
aeb667e1f4 STYLE/ENH: reduce code duplication for coded boundary conditions (issue #184)
- relocate common dictionary output into codedBase class
2016-06-09 16:13:04 +01:00
13f91bf5de functionObjects: 'output:' -> 'write:' for consistency with the naming of the 'write' function 2016-06-09 16:06:44 +01:00
fd734554b9 functionObjects::yPlus: Rationalized the functionality in 'execute' and 'write' 2016-06-09 16:06:09 +01:00
4734b1af5b wallShearStress: utility replaced by functionObject used with the '-postProcess' option 2016-06-09 16:05:13 +01:00
e175594e9f Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-09 14:52:04 +01:00
43b3fa2ce3 functionObjects::scalarTransport: simplified, standardized, rationalized
tutorials/incompressible/pisoFoam/les/pitzDaily: Added scalarTransport
functionObject to demonstrate the new functionality
2016-06-08 15:11:57 +01:00
680c687407 src/rigidBodyMeshMotion/Make/options: Removed debug switches 2016-06-07 16:25:29 +01:00
c88070040e PatchFlowRateInjection: Corrected parallel handling of the random position
Resolves bug-report http://bugs.openfoam.org/view.php?id=2111
2016-06-07 10:56:33 +01:00
06f22a9bf3 ENH: cleanup Ostream to ease usage (issue #254)
- Include newline in beginBlock/endBlock, since this corresponds to
  the standard usage. The beginBlock now takes keyType instead of word.

- Provide Ostream::writeEntry method to reduce clutter and simplify
  writing of entries.

  Before
  ======
      os << indent << "name" << nl
         << indent << token::BEGIN_BLOCK << incrIndent << nl;
      os.writeKeyword("key1") << val1 << token::END_STATEMENT << nl;
      os.writeKeyword("key2") << val2 << token::END_STATEMENT << nl;
      os << decrIndent << indent << token::END_BLOCK << nl;

  After
  =====
      os.beginBlock("name");
      os.writeEntry("key1", val1);
      os.writeEntry("key2", val2);
      os.endBlock();

- For completeness, support inline use of various Ostream methods.
  For example,

      os << beginBlock;
      os.writeEntry("key1", val1);
      os.writeEntry("key2", val2);
      os << endBlock;

- For those who wish to write in long form, can also use endEntry inline:

      os.beginBlock("name");
      os.writeKeyword("key1") << val2 << endEntry;
      os.writeKeyword("key2") << val2 << endEntry;
      os.endBlock();

The endEntry encapsulates a semi-colon, newline combination.
2016-06-06 11:51:05 +01:00
34e48fff4c kOmegaSSTDES: New DES model based on the k-omega SST RAS model
Description
    Implementation of the k-omega-SST-DES turbulence model for
    incompressible and compressible flows.

    DES model described in:
    \verbatim
        Menter, F. R., Kuntz, M., and Langtry, R. (2003).
        Ten Years of Industrial Experience with the SST Turbulence Model.
        Turbulence, Heat and Mass Transfer 4, ed: K. Hanjalic, Y. Nagano,
        & M. Tummers, Begell House, Inc., 625 - 632.
    \endverbatim

    Optional support for zonal filtering based on F1 or F2 is provided as
    described in the paper.

    For further details of the implementation of the base k-omega-SST model
    see Foam::kOmegaSST.

    The DES coefficient 'CDES' defaults to 0.61 but may be changed as
    necessary.

    The zonal filter filter defaults to '2' which uses "(1 - F2)" as
    suggested in the paper but '0' (no filtering) and '1' which uses
    "(1 - F1)" are also supported.
2016-06-06 08:56:54 +01:00
a3a04ceae9 ORourkeCollision: Cache access to the UList of parcel pointers for cell 2016-06-04 18:49:10 +01:00
d60ae9a496 ORourkeCollision: use a CompactListList to avoid memory allocation overhead 2016-06-04 17:45:35 +01:00
76f6236bbe DynamicList: minor cleanup 2016-06-04 17:45:11 +01:00
315ce79660 ORourkeCollision: Corrected bugs and added more efficient collision detection
See http://bugs.openfoam.org/view.php?id=2097
2016-06-04 11:48:27 +01:00
526ecfecf4 ENH: group info about particle output with "{}" etc
- The only reasonable means of mirroring the data layout.

  The '{}' delimiters mark the extent of the binary writes.

  The primitives 'label' and 'scalar' are directly supported and correspond
  to known byte widths.

  Using "List<scalar>" was a bad choice, since this triggers unpleasant
  tokenizing behaviour. Instead use 'scalars' as a provisional placeholder
  to indicates a list of scalar values. However, there is currently no
  support for actually handling lists of scalars, for several reasons:

   * The information is not available at compile-time.
     The cloud or parcel must be queried. And it must be guaranteed
     that this value is consistent for the entire cloud.

   * Binary output of lists is currently not great for determining the
     the encoded width:
        - A zero-size list is a single '0'.
        - The leading size is a non-constant number of digits.
        - There are prefix/suffix newlines need to be tagged and
          skipped.

  The special '*' (glob) token indicates that the remaining content
  has a dynamic variable length and nothing reasonable can be known
  about their sizes. This is exemplified by the collision records.
2016-06-02 17:39:19 +02:00
2b5e73fbce BUG: incorrect face order/orientation in boundBox (issue #196)
- was fortunately not used anywhere previously
2016-07-28 07:00:33 +02:00
79088bb611 functionObjects/forces: The 'rhoInf' entry is now only required if 'rho' is set to 'rhoInf' 2016-06-02 15:14:14 +01:00
90eda1279e Minor reformatting 2016-06-02 15:14:01 +01:00
2cdebff3b7 LESfilters: Ensure the coupled BCs of the field are updated before filtering
Resolves bug-report http://bugs.openfoam.org/view.php?id=2108
2016-06-02 12:14:51 +01:00
6000ea217f postProcess: Added '-list' option to list the available configured functionObjects 2016-06-01 16:28:07 +01:00
c7048a7b93 SprayParcel: Set the 'origId' of the child parcels
Resolves bug-report http://bugs.openfoam.org/view.php?id=2105
2016-05-31 21:25:09 +01:00
1be464d23d functionObjectList::readFunctionObject: Add support for functionObject arguments containing '()'s 2016-05-31 17:47:21 +01:00
c022a97ff4 HashTable: Correct error messages
Resolves bug-report http://bugs.openfoam.org/view.php?id=2106
2016-05-31 17:18:23 +01:00
a9492b074f Updated headers 2016-05-31 17:18:14 +01:00
7c45066996 includeEntry, includeEtcEntry, includeIfPresentEntry: report -> log
for consistency with the 'Log' macro.
2016-05-31 17:17:24 +01:00
7454518bc5 includeFuncEntry: Added support for function arguments compatible with the '-func' post-processing option
e.g.

functions
{
    #includeFunc mag(U)
}

executes 'mag' on the field 'U' writing the field 'mag(U)'.

The equivalent post-processing command is

postProcess -func 'mag(U)'
2016-05-31 14:43:44 +01:00
1be96a546c Added forward declaration of friend functions 2016-05-30 13:21:29 +01:00
fef82f935c Updated header 2016-05-30 08:31:21 +01:00
d438da1eb7 ACMI: Corrected conservation issue
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2057
2016-05-30 08:29:11 +01:00
3f608e95e6 Added forward declaration of friend functions 2016-05-30 08:28:35 +01:00
a4f8f589de Added forward declaration of friend functions 2016-05-29 22:28:37 +01:00
e4dc50dcb0 postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
6f9573bb12 etcFiles: Added functions to find directories in the 'etc' directories
'findEtcFiles' moved from OSspecific to 'etcFiles' as it is not OS-specific
2016-05-28 18:55:37 +01:00
c242c1762a ReadFields: Added functions to read selected fields and store in the objectRegistry 2016-05-26 22:59:08 +01:00
f7e6e7d9a4 functionObjects::blendingFactor: Minor reformat 2016-05-26 22:58:46 +01:00
af39491c04 fileName: Added recursive directory search function
//- Recursively search the given directory for the file
    //  returning the path relative to the directory or
    //  fileName::null if not found
    fileName search(const word& file, const fileName& directory);
2016-05-26 21:43:16 +01:00
ecb05dd66b SafeFatalIOError: Updated to print correct file and line number
Resolves bug-report http://bugs.openfoam.org/view.php?id=2102
Patch contributed by Mattijs Janssens
2016-05-26 17:40:37 +01:00
712fba33e3 functionObjects::Q: Result field named "Q" if the field is "U" otherwise "Q(<fieldName>)" 2016-05-26 15:32:31 +01:00