Files
2008-04-15 18:56:58 +01:00

384 lines
13 KiB
C

/*
* Copyright 1997, Regents of the University of Minnesota
*
* node_refine.c
*
* This file contains code that performs the k-way refinement
*
* Started 3/1/96
* George
*
* $Id: node_refine.c,v 1.2 2003/07/21 17:18:50 karypis Exp $
*/
#include <parmetislib.h>
#define PackWeightWhereInfo(a, b) (((a)<<10) + (b))
#define SelectWhere(a) ((a)%1024)
#define SelectWeight(a) (((a)>>10))
/*************************************************************************
* This function computes the initial id/ed
**************************************************************************/
void ComputeNodePartitionParams(CtrlType *ctrl, GraphType *graph, WorkSpaceType *wspace)
{
int i, j, nparts, nvtxs, nsep, firstvtx, lastvtx;
idxtype *xadj, *ladjncy, *adjwgt, *vtxdist, *vwgt, *lpwgts, *gpwgts, *sepind;
idxtype *where, *swhere, *rwhere;
NRInfoType *rinfo, *myrinfo;
int me, other, otherwgt;
IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->KWayInitTmr));
nvtxs = graph->nvtxs;
nparts = ctrl->nparts;
vtxdist = graph->vtxdist;
xadj = graph->xadj;
ladjncy = graph->adjncy;
adjwgt = graph->adjwgt;
vwgt = graph->vwgt;
where = graph->where;
rinfo = graph->nrinfo = (NRInfoType *)GKmalloc(sizeof(NRInfoType)*nvtxs, "ComputeNodePartitionParams: rinfo");
lpwgts = graph->lpwgts = idxsmalloc(2*nparts, 0, "ComputePartitionParams: lpwgts");
gpwgts = graph->gpwgts = idxmalloc(2*nparts, "ComputePartitionParams: gpwgts");
sepind = graph->sepind = idxmalloc(nvtxs, "ComputePartitionParams: sepind");
firstvtx = vtxdist[ctrl->mype];
lastvtx = vtxdist[ctrl->mype+1];
/*------------------------------------------------------------
/ Send/Receive the where information of interface vertices.
/ Also use this to also encode the vwgt information of this
/ vertex. This is a hack, but it should work for now!
/------------------------------------------------------------*/
swhere = wspace->indices;
rwhere = where + nvtxs;
for (i=0; i<nvtxs; i++) {
ASSERTP(ctrl, where[i] >= 0 && where[i] < 2*nparts, (ctrl, "%d\n", where[i]) );
where[i] = PackWeightWhereInfo(vwgt[i], where[i]);
}
CommInterfaceData(ctrl, graph, where, swhere, rwhere);
/*------------------------------------------------------------
/ Compute now the degrees
/------------------------------------------------------------*/
for (nsep=i=0; i<nvtxs; i++) {
me = SelectWhere(where[i]);
ASSERT(ctrl, me >= 0 && me < 2*nparts);
lpwgts[me] += vwgt[i];
if (me >= nparts) { /* If it is a separator vertex */
sepind[nsep++] = i;
lpwgts[2*nparts-1] += vwgt[i];
myrinfo = rinfo+i;
myrinfo->edegrees[0] = myrinfo->edegrees[1] = 0;
for (j=xadj[i]; j<xadj[i+1]; j++) {
other = SelectWhere(where[ladjncy[j]]);
otherwgt = SelectWeight(where[ladjncy[j]]);
if (me != other)
myrinfo->edegrees[other%2] += otherwgt;
}
}
}
graph->nsep = nsep;
/* Finally, sum-up the partition weights */
MPI_Allreduce((void *)lpwgts, (void *)gpwgts, 2*nparts, IDX_DATATYPE, MPI_SUM, ctrl->comm);
graph->mincut = gpwgts[2*nparts-1];
#ifdef XX
/* Print Weight information */
if (ctrl->mype == 0) {
for (i=0; i<nparts; i+=2)
printf("[%5d %5d %5d] ", gpwgts[i], gpwgts[i+1], gpwgts[nparts+i]);
printf("\n");
}
#endif
IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->KWayInitTmr));
}
/*************************************************************************
* This function performs k-way refinement
**************************************************************************/
void KWayNodeRefine(CtrlType *ctrl, GraphType *graph, WorkSpaceType *wspace, int npasses, float ubfraction)
{
int i, ii, j, k, pass, nvtxs, firstvtx, lastvtx, otherlastvtx, c, nmoves,
nlupd, nsupd, nnbrs, nchanged, nsep;
int npes = ctrl->npes, mype = ctrl->mype, nparts = ctrl->nparts;
idxtype *xadj, *ladjncy, *adjwgt, *vtxdist, *vwgt;
idxtype *where, *lpwgts, *gpwgts, *sepind;
idxtype *peind, *recvptr, *sendptr;
idxtype *update, *supdate, *rupdate, *pe_updates, *htable, *changed;
idxtype *badminpwgt, *badmaxpwgt;
KeyValueType *swchanges, *rwchanges;
int *nupds_pe;
NRInfoType *rinfo, *myrinfo;
int from, me, other, otherwgt, oldcut;
IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->KWayTmr));
nvtxs = graph->nvtxs;
vtxdist = graph->vtxdist;
xadj = graph->xadj;
ladjncy = graph->adjncy;
adjwgt = graph->adjwgt;
vwgt = graph->vwgt;
firstvtx = vtxdist[mype];
lastvtx = vtxdist[mype+1];
where = graph->where;
rinfo = graph->nrinfo;
lpwgts = graph->lpwgts;
gpwgts = graph->gpwgts;
nsep = graph->nsep;
sepind = graph->sepind;
nnbrs = graph->nnbrs;
peind = graph->peind;
recvptr = graph->recvptr;
sendptr = graph->sendptr;
changed = idxmalloc(nvtxs, "KWayRefine: changed");
rwchanges = wspace->pairs;
swchanges = rwchanges + recvptr[nnbrs];
update = idxmalloc(nvtxs, "KWayRefine: update");
supdate = wspace->indices;
rupdate = supdate + recvptr[nnbrs];
nupds_pe = imalloc(npes, "KWayRefine: nupds_pe");
htable = idxsmalloc(nvtxs+graph->nrecv, 0, "KWayRefine: lhtable");
badminpwgt = wspace->pv1;
badmaxpwgt = wspace->pv2;
for (i=0; i<nparts; i+=2) {
badminpwgt[i] = badminpwgt[i+1] = (1.0/ubfraction)*(gpwgts[i]+gpwgts[i+1])/2;
badmaxpwgt[i] = badmaxpwgt[i+1] = ubfraction*(gpwgts[i]+gpwgts[i+1])/2;
}
IFSET(ctrl->dbglvl, DBG_REFINEINFO, PrintNodeBalanceInfo(ctrl, nparts, gpwgts, badminpwgt, badmaxpwgt, 1));
for (pass=0; pass<npasses; pass++) {
oldcut = graph->mincut;
for (c=0; c<2; c++) {
for (i=0; i<nparts; i+=2) {
badminpwgt[i] = badminpwgt[i+1] = (1.0/ubfraction)*(gpwgts[i]+gpwgts[i+1])/2;
badmaxpwgt[i] = badmaxpwgt[i+1] = ubfraction*(gpwgts[i]+gpwgts[i+1])/2;
}
nlupd = nsupd = nmoves = nchanged = 0;
for (ii=0; ii<nsep; ii++) {
i = sepind[ii];
from = SelectWhere(where[i]);
ASSERT(ctrl, from >= nparts);
/* Go through the loop if gain is possible for the separator vertex */
if (rinfo[i].edegrees[(c+1)%2] <= vwgt[i]) {
other = from%nparts+c; /* It is one-sided move so we know where it goes */
if (gpwgts[other]+vwgt[i] > badmaxpwgt[other]) {
/* printf("Skip because of weight! %d\n", vwgt[i]-rinfo[i].edegrees[(c+1)%2]); */
continue; /* We cannot move it there because it gets too heavy */
}
/* Update where, weight, and ID/ED information of the vertex you moved */
where[i] = PackWeightWhereInfo(vwgt[i], other);
/* Remove this vertex from the sepind. Note the trick for looking at the sepind[ii] again */
sepind[ii--] = sepind[--nsep];
/* myprintf(ctrl, "Vertex %d [%d %d] is moving to %d from %d [%d]\n", i+firstvtx, vwgt[i], rinfo[i].edegrees[(c+1)%2], other, from, SelectWhere(where[i])); */
lpwgts[from] -= vwgt[i];
lpwgts[2*nparts-1] -= vwgt[i];
lpwgts[other] += vwgt[i];
gpwgts[other] += vwgt[i];
/*
* Put the vertices adjacent to i that belong to either the separator or
* the (c+1)%2 partition into the update array
*/
for (j=xadj[i]; j<xadj[i+1]; j++) {
k = ladjncy[j];
if (htable[k] == 0 && SelectWhere(where[k]) != other) {
htable[k] = 1;
if (k<nvtxs)
update[nlupd++] = k;
else
supdate[nsupd++] = k;
}
}
nmoves++;
if (graph->pexadj[i+1]-graph->pexadj[i] > 0)
changed[nchanged++] = i;
}
}
/* myprintf(ctrl, "nmoves: %d, nlupd: %d, nsupd: %d\n", nmoves, nlupd, nsupd); */
/* Tell everybody interested what the new where[] info is for the interface vertices */
CommChangedInterfaceData(ctrl, graph, nchanged, changed, where, swchanges, rwchanges, wspace->pv4);
IFSET(ctrl->dbglvl, DBG_RMOVEINFO, rprintf(ctrl, "\t[%d %d], [%d %d %d]\n",
pass, c, GlobalSESum(ctrl, nmoves), GlobalSESum(ctrl, nsupd), GlobalSESum(ctrl, nlupd)));
/*-------------------------------------------------------------
/ Time to communicate with processors to send the vertices
/ whose degrees need to be update.
/-------------------------------------------------------------*/
/* Issue the receives first */
for (i=0; i<nnbrs; i++) {
MPI_Irecv((void *)(rupdate+sendptr[i]), sendptr[i+1]-sendptr[i], IDX_DATATYPE,
peind[i], 1, ctrl->comm, ctrl->rreq+i);
}
/* Issue the sends next. This needs some preporcessing */
for (i=0; i<nsupd; i++) {
htable[supdate[i]] = 0;
supdate[i] = graph->imap[supdate[i]];
}
iidxsort(nsupd, supdate);
for (j=i=0; i<nnbrs; i++) {
otherlastvtx = vtxdist[peind[i]+1];
for (k=j; k<nsupd && supdate[k] < otherlastvtx; k++);
MPI_Isend((void *)(supdate+j), k-j, IDX_DATATYPE, peind[i], 1, ctrl->comm, ctrl->sreq+i);
j = k;
}
/* OK, now get into the loop waiting for the send/recv operations to finish */
MPI_Waitall(nnbrs, ctrl->rreq, ctrl->statuses);
for (i=0; i<nnbrs; i++)
MPI_Get_count(ctrl->statuses+i, IDX_DATATYPE, nupds_pe+i);
MPI_Waitall(nnbrs, ctrl->sreq, ctrl->statuses);
/*-------------------------------------------------------------
/ Place the received to-be updated vertices into update[]
/-------------------------------------------------------------*/
for (i=0; i<nnbrs; i++) {
pe_updates = rupdate+sendptr[i];
for (j=0; j<nupds_pe[i]; j++) {
k = pe_updates[j];
if (htable[k-firstvtx] == 0) {
htable[k-firstvtx] = 1;
update[nlupd++] = k-firstvtx;
}
}
}
/*-------------------------------------------------------------
/ Update the where information of the vertices that are pulled
/ into the separator.
/-------------------------------------------------------------*/
nchanged = 0;
for (ii=0; ii<nlupd; ii++) {
i = update[ii];
me = SelectWhere(where[i]);
if (me < nparts && me%2 == (c+1)%2) { /* This vertex is pulled into the separator */
lpwgts[me] -= vwgt[i];
where[i] = PackWeightWhereInfo(vwgt[i], nparts+me-(me%2));
sepind[nsep++] = i; /* Put the vertex into the sepind array */
if (graph->pexadj[i+1]-graph->pexadj[i] > 0)
changed[nchanged++] = i;
lpwgts[SelectWhere(where[i])] += vwgt[i];
lpwgts[2*nparts-1] += vwgt[i];
/* myprintf(ctrl, "Vertex %d moves into the separator from %d to %d\n", i+firstvtx, me, SelectWhere(where[i])); */
}
}
/* Tell everybody interested what the new where[] info is for the interface vertices */
CommChangedInterfaceData(ctrl, graph, nchanged, changed, where, swchanges, rwchanges, wspace->pv4);
/*-------------------------------------------------------------
/ Update the rinfo of the vertices in the update[] array
/-------------------------------------------------------------*/
for (ii=0; ii<nlupd; ii++) {
i = update[ii];
ASSERT(ctrl, htable[i] == 1);
htable[i] = 0;
me = SelectWhere(where[i]);
if (me >= nparts) { /* If it is a separator vertex */
/* myprintf(ctrl, "Updating %d %d\n", i+firstvtx, me); */
myrinfo = rinfo+i;
myrinfo->edegrees[0] = myrinfo->edegrees[1] = 0;
for (j=xadj[i]; j<xadj[i+1]; j++) {
other = SelectWhere(where[ladjncy[j]]);
otherwgt = SelectWeight(where[ladjncy[j]]);
if (me != other)
myrinfo->edegrees[other%2] += otherwgt;
}
}
}
/* Finally, sum-up the partition weights */
MPI_Allreduce((void *)lpwgts, (void *)gpwgts, 2*nparts, IDX_DATATYPE, MPI_SUM, ctrl->comm);
graph->mincut = gpwgts[2*nparts-1];
IFSET(ctrl->dbglvl, DBG_REFINEINFO, PrintNodeBalanceInfo(ctrl, nparts, gpwgts, badminpwgt, badmaxpwgt, 0));
}
if (graph->mincut == oldcut)
break;
}
/* Go and clear-up the where array */
for (i=0; i<nvtxs+graph->nrecv; i++)
where[i] = SelectWhere(where[i]);
GKfree((void **)&update, (void **)&nupds_pe, (void **)&htable, (void **)&changed, LTERM);
IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->KWayTmr));
}
/*************************************************************************
* This function prints balance information for the parallel k-section
* refinement algorithm
**************************************************************************/
void PrintNodeBalanceInfo(CtrlType *ctrl, int nparts, idxtype *gpwgts, idxtype *badminpwgt, idxtype *badmaxpwgt, int title)
{
int i;
if (ctrl->mype == 0) {
if (title)
printf("K-way sep-refinement: TotalSep: %d, ", gpwgts[2*nparts-1]);
else
printf("\tTotalSep: %d, ", gpwgts[2*nparts-1]);
for (i=0; i<nparts; i+=2)
printf(" [%5d %5d %5d %5d %5d]", gpwgts[i], gpwgts[i+1], gpwgts[nparts+i], badminpwgt[i], badmaxpwgt[i]);
printf("\n");
}
MPI_Barrier(ctrl->comm);
}