# PhasicFlow: boundaryBase Class Reference
PhasicFlow is an open-source parallel DEM (discrete element method) package for simulating granular flow. It is developed in C++ and can be exectued on both GPU (like CUDA) and CPU.

boundaryBase Class Referenceabstract
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## Public Types

using | pointFieldAccessType = deviceScatteredFieldAccess< realx3 >

## Public Member Functions

uint32 | markInNegativeSide (const word &name, uint32Vector_D &markedIndices) const
| TypeInfo ("boundaryBase")
| boundaryBase (const dictionary &dict, const plane &bplane, internalPoints &internal, boundaryList &bndrs, uint32 thisIndex)
| boundaryBase (const boundaryBase &)=delete
boundaryBase & | operator= (const boundaryBase &)=delete
| boundaryBase (boundaryBase &&)=default
boundaryBase & | operator= (boundaryBase &&)=default
| ~boundaryBase () override=default
| create_vCtor (boundaryBase, dictionary,(const dictionary &dict, const plane &bplane, internalPoints &internal, boundaryList &bndrs, uint32 thisIndex),(dict, bplane, internal, bndrs, thisIndex))
real | neighborLengthIntoInternal () const
| The length from boundary plane into the domain where beyond that distance internal points exist. More...
virtual real | neighborLength () const
| The distance length from boundary plane where neighbor particles still exist in that distance. More...
virtual realx3 | boundaryExtensionLength () const
| The extention length (in vector form) for the boundary as required by each boundary type. More...
bool | performBoundarytUpdate () const
| Is this iter the right time for updating bounday list. More...
bool | iterBeforeBoundaryUpdate () const
const word & | type () const
const word & | name () const
bool | empty () const
auto | size () const
auto | capacity () const
int | neighborProcessorNo () const
int | thisProcessorNo () const
bool | isBoundaryMaster () const
uint32 | thisBoundaryIndex () const
uint32 | mirrorBoundaryIndex () const
const internalPoints & | internal () const
internalPoints & | internal ()
const pointStructure & | pStruct () const
const Time & | time () const
const auto & | indexList () const
const auto & | indexListHost () const
boundaryBase & | mirrorBoundary ()
const boundaryBase & | mirrorBoundary () const
const plane & | boundaryPlane () const
| the actual boundary plane of this boundary More...
virtual realx3 | displacementVectroToMirror () const
| displacement vector that transfers points to a distance that is equal to the distance between this plane and the mirror plane, the vector points from this plane to mirror plane More...
virtual bool | beforeIteration (uint32 step, const timeInfo &ti, bool updateIter, bool iterBeforeUpdate, bool &callAgain)
virtual bool | iterate (const timeInfo &ti)=0
virtual bool | afterIteration (const timeInfo &ti)=0
pointFieldAccessType | thisPoints () const
virtual uint32 | neighborProcSize () const
| Return number of points in the neighbor processor boundary. More...
virtual realx3Vector_D & | neighborProcPoints ()
| Return a reference to point positions in the neighbor processor boundary. More...
virtual const realx3Vector_D & | neighborProcPoints () const
| Return a const reference to point positions in the neighbor processor boundary. More...
virtual uint32 | numToTransfer () const
virtual uint32 | numToRecieve () const
Public Member Functions inherited from subscriber
| subscriber (const word &name)
| subscriber (const subscriber &)
| Copy constructor, only copies the name, not the list. More...
| subscriber (subscriber &&)
| Move constructor, moves the name and the list, also change the subriber of the object in the list More...
subscriber & | operator= (const subscriber &)
| Copy assignemnt, only assign the name, do not assign the list. More...
subscriber & | operator= (subscriber &&)
| Move assignment, move assign name and list, also change the subcriber of the object in the list More...
virtual | ~subscriber ()
virtual bool | subscribe (message msg, observer *obsevr) const
virtual bool | unsubscribe (observer *obsevr) const
bool | notify (uint32 iter, real t, real dt, const message msg, const anyList &varList)
bool | notify (const timeInfo &ti, const message msg, const anyList &varList)
const word & | subscriberName () const

## Static Public Member Functions

static uniquePtr< boundaryBase > | create (const dictionary &dict, const plane &bplane, internalPoints &internal, boundaryList &bndrs, uint32 thisIndex)

## Protected Member Functions

virtual void | setSize (uint32 newSize)
| Set the size of indexList. More...
void | setUpdateTime (bool val)
void | setNewIndices (const uint32Vector_D &newIndices)
bool | appendNewIndices (const uint32Vector_D &newIndices)
bool | removeIndices (uint32 numRemove, const uint32Vector_D &removeMask)
bool | setRemoveKeepIndices (const uint32Vector_D &removeIndices, const uint32Vector_D &keepIndices)
bool | transferPointsToMirror (uint32 numTransfer, const uint32Vector_D &transferMask, uint32 transferBoundaryIndex, realx3 transferVector)
void | unSyncLists ()
void | syncLists () const
virtual bool | updataBoundaryData (int step)
| Update this boundary data in two steps (1 and 2). More...
virtual bool | transferData (uint32 iter, int step, bool &callAgain)
| This method is called when a transfer of data is to be performed between processors (in afterIteration). More...

## Private Attributes

friend | boundaryList
const plane & | boundaryPlane_
uint32Vector_D | indexList_
| list of particles indices on device More...
uint32Vector_H | indexListHost_
| list of particles indieces on host More...
bool | listsSync_ = false
| device and host list are sync More...
real | neighborLength_
| The length defined for creating neighbor list. More...
bool | updateTime_ = false
bool | iterBeforeUpdate_ = false
real | boundaryExtntionLengthRatio_
| the extra boundary extension beyound actual limits of boundary More...
internalPoints & | internal_
| a reference to internal points More...
boundaryList & | boundaries_
| a reference to the list of boundaries (never use this in the constructor). More...
uint32 | thisBoundaryIndex_
int | neighborProcessorNo_
bool | isBoundaryMaster_
word | name_
word | type_

## Detailed Description

Definition at line 42 of file boundaryBase.hpp.

## Member Typedef Documentation

## pointFieldAccessType

using pointFieldAccessType = deviceScatteredFieldAccess<realx3>

Definition at line 49 of file boundaryBase.hpp.

## Constructor & Destructor Documentation

## boundaryBase() [1/3]

boundaryBase | ( | const dictionary & | dict,
|  | const plane & | bplane,
|  | internalPoints & | internal,
|  | boundaryList & | bndrs,
|  | uint32 | thisIndex
| ) |  |

Definition at line 225 of file boundaryBase.cpp.

References boundaryBase::unSyncLists().

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## boundaryBase() [2/3]

boundaryBase | ( | const boundaryBase & |  | ) |

delete

## boundaryBase() [3/3]

boundaryBase | ( | boundaryBase && |  | ) |

default

## ~boundaryBase()

~boundaryBase | ( |  | ) |

overridedefault

## Member Function Documentation

## setSize()

void setSize | ( | uint32 | newSize | ) |

protectedvirtual

Set the size of indexList.

It is virtual to let derived classed to be aware of the fact that the size of boundary points has been changed. So, any drived class that override this method should call boundaryBase::setSize(newSize) too.

Definition at line 30 of file boundaryBase.cpp.

References boundaryBase::indexList_, VectorSingle< T, MemorySpace >::resize(), and boundaryBase::unSyncLists().

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## setUpdateTime()

void setUpdateTime | ( | bool | val | ) |

inlineprotected

Definition at line 104 of file boundaryBase.hpp.

References boundaryBase::updateTime_.

## setNewIndices()

void setNewIndices | ( | const uint32Vector_D & | newIndices | ) |

protected

Definition at line 37 of file boundaryBase.cpp.

## appendNewIndices()

bool appendNewIndices | ( | const uint32Vector_D & | newIndices | ) |

protected

Definition at line 47 of file boundaryBase.cpp.

References message::add(), message::BNDR_APPEND, anyList::emplaceBack(), message::eventName(), and fatalErrorInFunction.

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## removeIndices()

bool removeIndices | ( | uint32 | numRemove,
|  | const uint32Vector_D & | removeMask
| ) |  |

protected

Definition at line 79 of file boundaryBase.cpp.

References message::BNDR_RESET, pFlow::boundaryBaseKernels::createRemoveKeepIndices(), anyList::emplaceBack(), pFlow::endl(), message::eventName(), fatalErrorInFunction, and VectorSingle< T, MemorySpace >::size().

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## setRemoveKeepIndices()

bool setRemoveKeepIndices | ( | const uint32Vector_D & | removeIndices,
|  | const uint32Vector_D & | keepIndices
| ) |  |

protected

Definition at line 130 of file boundaryBase.cpp.

References pFlow::endl(), and fatalErrorInFunction.

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## transferPointsToMirror()

bool transferPointsToMirror | ( | uint32 | numTransfer,
|  | const uint32Vector_D & | transferMask,
|  | uint32 | transferBoundaryIndex,
|  | realx3 | transferVector
| ) |  |

protected

Definition at line 149 of file boundaryBase.cpp.

References pFlow::boundaryBaseKernels::createRemoveKeepIndices(), pFlow::endl(), fatalErrorInFunction, and VectorSingle< T, MemorySpace >::size().

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## unSyncLists()

void unSyncLists | ( |  | ) |

inlineprotected

Definition at line 127 of file boundaryBase.hpp.

References boundaryBase::listsSync_.

Referenced by boundaryBase::boundaryBase(), and boundaryBase::setSize().

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## syncLists()

void syncLists | ( |  | ) | const

inlineprotected

Definition at line 132 of file boundaryBase.hpp.

References VectorSingle< T, MemorySpace >::assignFromDevice(), boundaryBase::indexList_, boundaryBase::indexListHost_, and boundaryBase::listsSync_.

Referenced by boundaryBase::indexListHost().

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## updataBoundaryData()

virtual bool updataBoundaryData | ( | int | step | ) |

inlineprotectedvirtual

Update this boundary data in two steps (1 and 2).

This is called after calling beforeIteration for all boundaries, so any particle addition, deletion, and transfer has been finished up to this point. This two-step update help to have a flexible mechanism for data transfer, mostly for MPI related jobs.

Definition at line 148 of file boundaryBase.hpp.

## transferData()

virtual bool transferData | ( | uint32 | iter,
|  | int | step,
|  | bool & | callAgain
| ) |  |

inlineprotectedvirtual

This method is called when a transfer of data is to be performed between processors (in afterIteration).

Parameters

  step | is the step in the transfer of data.
  callAgain | if operation requires at least one additional step to complete it should be set to true and if the operation is complete and no need for additional step, it should be set to false;

Returns
  true: succesful, false: fail

Definition at line 161 of file boundaryBase.hpp.

## markInNegativeSide()

pFlow::uint32 markInNegativeSide | ( | const word & | name,
|  | uint32Vector_D & | markedIndices
| ) |  | const

Definition at line 193 of file boundaryBase.cpp.

References VectorSingle< T, MemorySpace >::deviceViewAll(), VectorSingle< T, MemorySpace >::fill(), LAMBDA_HD, infinitePlane::pointInNegativeSide(), and VectorSingle< T, MemorySpace >::reallocate().

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## TypeInfo()

TypeInfo | ( | "boundaryBase" |  | ) |

## operator=() [1/2]

boundaryBase& operator= | ( | const boundaryBase & |  | ) |

delete

## operator=() [2/2]

boundaryBase& operator= | ( | boundaryBase && |  | ) |

default

## create_vCtor()

create_vCtor | ( | boundaryBase | ,
|  | dictionary | ,
|  | (const dictionary &dict, const plane &bplane, internalPoints &internal, boundaryList &bndrs, uint32 thisIndex) | ,
|  | (dict, bplane, internal, bndrs, thisIndex) |
| ) |  |

## neighborLengthIntoInternal()

real neighborLengthIntoInternal | ( |  | ) | const

inline

The length from boundary plane into the domain where beyond that distance internal points exist.

By conventions is it always equal to neighborLength_

Definition at line 211 of file boundaryBase.hpp.

References boundaryBase::neighborLength_.

Referenced by boundaryPeriodic::neighborLength().

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## neighborLength()

virtual real neighborLength | ( |  | ) | const

inlinevirtual

The distance length from boundary plane where neighbor particles still exist in that distance.

This length may be modified in each boundary type as required. In this case the boundaryExtensionLength method should also be modified accordingly.

Reimplemented in boundaryPeriodic.

Definition at line 222 of file boundaryBase.hpp.

References boundaryBase::boundaryExtntionLengthRatio_, and boundaryBase::neighborLength_.

Referenced by periodicBoundaryContactSearch::setSearchBox().

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## boundaryExtensionLength()

virtual realx3 boundaryExtensionLength | ( |  | ) | const

inlinevirtual

The extention length (in vector form) for the boundary as required by each boundary type.

It is allowed for each boundary type to be extended outward to allow particles to stay more in its list before being removed from its list.

Reimplemented in boundaryPeriodic.

Definition at line 233 of file boundaryBase.hpp.

References boundaryBase::boundaryExtntionLengthRatio_, boundaryBase::boundaryPlane_, boundaryBase::neighborLength_, and infinitePlane::normal().

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## performBoundarytUpdate()

bool performBoundarytUpdate | ( |  | ) | const

inline

Is this iter the right time for updating bounday list.

Definition at line 240 of file boundaryBase.hpp.

References boundaryBase::updateTime_.

## iterBeforeBoundaryUpdate()

bool iterBeforeBoundaryUpdate | ( |  | ) | const

inline

Definition at line 246 of file boundaryBase.hpp.

References boundaryBase::iterBeforeUpdate_.

## type()

const word& type | ( |  | ) | const

inline

Definition at line 252 of file boundaryBase.hpp.

References boundaryBase::type_.

Referenced by boundaryGrainParticles::create(), boundarySphereParticles::create(), boundaryIntegration::create(), boundaryContactSearch::create(), boundarySphereInteraction< contactForceModel, geometryMotionModel >::create(), boundaryGrainInteraction< contactForceModel, geometryMotionModel >::create(), boundaryField< T, void >::create(), and generalBoundary::type().

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## name()

const word& name | ( |  | ) | const

inline

Definition at line 258 of file boundaryBase.hpp.

References boundaryBase::name_.

Referenced by generalBoundary::boundaryName(), boundarySphereParticles::create(), boundaryGrainParticles::create(), boundaryIntegration::create(), boundaryContactSearch::create(), boundaryGrainInteraction< contactForceModel, geometryMotionModel >::create(), and boundarySphereInteraction< contactForceModel, geometryMotionModel >::create().

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## empty()

bool empty | ( |  | ) | const

inline

Definition at line 264 of file boundaryBase.hpp.

References boundaryBase::indexList_, and VectorSingle< T, MemorySpace >::size().

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## size()

auto size | ( |  | ) | const

inline

Definition at line 270 of file boundaryBase.hpp.

References boundaryBase::indexList_, and VectorSingle< T, MemorySpace >::size().

Referenced by generalBoundary::size().

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## capacity()

auto capacity | ( |  | ) | const

inline

Definition at line 276 of file boundaryBase.hpp.

References VectorSingle< T, MemorySpace >::capacity(), and boundaryBase::indexList_.

Referenced by generalBoundary::capacity().

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## neighborProcessorNo()

int neighborProcessorNo | ( |  | ) | const

inline

Definition at line 282 of file boundaryBase.hpp.

References boundaryBase::neighborProcessorNo_.

Referenced by generalBoundary::neighborProcessorNo().

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## thisProcessorNo()

int thisProcessorNo | ( |  | ) | const

inline

Definition at line 288 of file boundaryBase.hpp.

References localProcessors::localRank(), and pFlow::pFlowProcessors().

Referenced by generalBoundary::thisProcessorNo().

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## isBoundaryMaster()

bool isBoundaryMaster | ( |  | ) | const

inline

Definition at line 294 of file boundaryBase.hpp.

References boundaryBase::isBoundaryMaster_.

## thisBoundaryIndex()

uint32 thisBoundaryIndex | ( |  | ) | const

inline

Definition at line 300 of file boundaryBase.hpp.

References boundaryBase::thisBoundaryIndex_.

Referenced by generalBoundary::thisBoundaryIndex().

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## mirrorBoundaryIndex()

uint32 mirrorBoundaryIndex | ( |  | ) | const

inline

Definition at line 306 of file boundaryBase.hpp.

References boundaryBase::thisBoundaryIndex_.

Referenced by generalBoundary::mirrorBoundaryindex().

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## internal() [1/2]

const internalPoints& internal | ( |  | ) | const

inline

Definition at line 312 of file boundaryBase.hpp.

References boundaryBase::internal_.

## internal() [2/2]

internalPoints& internal | ( |  | ) |

inline

Definition at line 318 of file boundaryBase.hpp.

References boundaryBase::internal_.

## pStruct()

const pFlow::pointStructure & pStruct | ( |  | ) | const

Definition at line 249 of file boundaryBase.cpp.

## time()

const pFlow::Time & time | ( |  | ) | const

Definition at line 254 of file boundaryBase.cpp.

## indexList()

const auto& indexList | ( |  | ) | const

inline

Definition at line 328 of file boundaryBase.hpp.

References boundaryBase::indexList_.

Referenced by generalBoundary::indexList().

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## indexListHost()

const auto& indexListHost | ( |  | ) | const

inline

Definition at line 334 of file boundaryBase.hpp.

References boundaryBase::indexListHost_, and boundaryBase::syncLists().

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## mirrorBoundary() [1/2]

const pFlow::boundaryBase & mirrorBoundary | ( |  | ) |

Definition at line 259 of file boundaryBase.cpp.

Referenced by generalBoundary::mirrorBoundary(), and periodicBoundaryContactSearch::setSearchBox().

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## mirrorBoundary() [2/2]

const boundaryBase& mirrorBoundary | ( |  | ) | const

## boundaryPlane()

const plane& boundaryPlane | ( |  | ) | const

inline

the actual boundary plane of this boundary

Definition at line 345 of file boundaryBase.hpp.

References boundaryBase::boundaryPlane_.

Referenced by boundaryPeriodic::boundaryExtensionLength(), and periodicBoundaryContactSearch::setSearchBox().

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## displacementVectroToMirror()

pFlow::realx3 displacementVectroToMirror | ( |  | ) | const

virtual

displacement vector that transfers points
to a distance that is equal to the distance between this plane and the mirror plane, the vector points from this plane to mirror plane

Definition at line 299 of file boundaryBase.cpp.

References infinitePlane::d(), and infinitePlane::normal().

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## beforeIteration()

virtual bool beforeIteration | ( | uint32 | step,
|  | const timeInfo & | ti,
|  | bool | updateIter,
|  | bool | iterBeforeUpdate,
|  | bool & | callAgain
| ) |  |

inlinevirtual

Reimplemented in boundaryExit, boundaryPeriodic, boundaryReflective, and boundaryNone.

Definition at line 359 of file boundaryBase.hpp.

References boundaryBase::iterBeforeUpdate_, and boundaryBase::updateTime_.

Referenced by boundaryNone::beforeIteration(), and boundaryReflective::beforeIteration().

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## iterate()

virtual bool iterate | ( | const timeInfo & | ti | ) |

pure virtual

Implemented in boundaryExit, boundaryPeriodic, boundaryReflective, and boundaryNone.

## afterIteration()

virtual bool afterIteration | ( | const timeInfo & | ti | ) |

pure virtual

Implemented in boundaryExit, boundaryPeriodic, boundaryReflective, and boundaryNone.

## thisPoints()

pFlow::boundaryBase::pointFieldAccessType thisPoints | ( |  | ) | const

Definition at line 270 of file boundaryBase.cpp.

Referenced by periodicBoundaryContactSearch::broadSearch().

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## neighborProcSize()

virtual uint32 neighborProcSize | ( |  | ) | const

inlinevirtual

Return number of points in the neighbor processor boundary.

Definition at line 382 of file boundaryBase.hpp.

Referenced by generalBoundary::neighborProcSize().

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## neighborProcPoints() [1/2]

const pFlow::realx3Vector_D & neighborProcPoints | ( |  | ) |

virtual

Return a reference to point positions in the neighbor processor boundary.

Definition at line 282 of file boundaryBase.cpp.

References fatalExit, and notImplementedFunction.

## neighborProcPoints() [2/2]

virtual const realx3Vector_D& neighborProcPoints | ( |  | ) | const

virtual

Return a const reference to point positions in the neighbor processor boundary.

## numToTransfer()

virtual uint32 numToTransfer | ( |  | ) | const

inlinevirtual

Definition at line 398 of file boundaryBase.hpp.

## numToRecieve()

virtual uint32 numToRecieve | ( |  | ) | const

inlinevirtual

Definition at line 404 of file boundaryBase.hpp.

## create()

pFlow::uniquePtr< pFlow::boundaryBase > create | ( | const dictionary & | dict,
|  | const plane & | bplane,
|  | internalPoints & | internal,
|  | boundaryList & | bndrs,
|  | uint32 | thisIndex
| ) |  |

static

- static create

Definition at line 308 of file boundaryBase.cpp.

References pFlow::angleBracketsNames(), fatalError, fatalExit, dictionary::getVal(), and pFlow::printKeys().

Referenced by boundaryList::createBoundaries().

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## Member Data Documentation

## boundaryList

friend boundaryList

private

Definition at line 54 of file boundaryBase.hpp.

## boundaryPlane_

const plane& boundaryPlane_

private

Definition at line 56 of file boundaryBase.hpp.

Referenced by boundaryBase::boundaryExtensionLength(), and boundaryBase::boundaryPlane().

## indexList_

uint32Vector_D indexList_

private

list of particles indices on device

Definition at line 59 of file boundaryBase.hpp.

Referenced by boundaryBase::capacity(), boundaryBase::empty(), boundaryBase::indexList(), boundaryBase::setSize(), boundaryBase::size(), and boundaryBase::syncLists().

## indexListHost_

uint32Vector_H indexListHost_

mutableprivate

list of particles indieces on host

Definition at line 62 of file boundaryBase.hpp.

Referenced by boundaryBase::indexListHost(), and boundaryBase::syncLists().

## listsSync_

bool listsSync_ = false

mutableprivate

device and host list are sync

Definition at line 65 of file boundaryBase.hpp.

Referenced by boundaryBase::syncLists(), and boundaryBase::unSyncLists().

## neighborLength_

real neighborLength_

private

The length defined for creating neighbor list.

Definition at line 68 of file boundaryBase.hpp.

Referenced by boundaryBase::boundaryExtensionLength(), boundaryBase::neighborLength(), and boundaryBase::neighborLengthIntoInternal().

## updateTime_

bool updateTime_ = false

private

Definition at line 70 of file boundaryBase.hpp.

Referenced by boundaryBase::beforeIteration(), boundaryBase::performBoundarytUpdate(), and boundaryBase::setUpdateTime().

## iterBeforeUpdate_

bool iterBeforeUpdate_ = false

private

Definition at line 72 of file boundaryBase.hpp.

Referenced by boundaryBase::beforeIteration(), and boundaryBase::iterBeforeBoundaryUpdate().

## boundaryExtntionLengthRatio_

real boundaryExtntionLengthRatio_

private

the extra boundary extension beyound actual limits of boundary

Definition at line 75 of file boundaryBase.hpp.

Referenced by boundaryBase::boundaryExtensionLength(), and boundaryBase::neighborLength().

## internal_

internalPoints& internal_

private

a reference to internal points

Definition at line 78 of file boundaryBase.hpp.

Referenced by boundaryBase::internal().

## boundaries_

boundaryList& boundaries_

private

a reference to the list of boundaries (never use this in the constructor).

Definition at line 82 of file boundaryBase.hpp.

## thisBoundaryIndex_

uint32 thisBoundaryIndex_

private

Definition at line 84 of file boundaryBase.hpp.

Referenced by boundaryBase::mirrorBoundaryIndex(), and boundaryBase::thisBoundaryIndex().

## neighborProcessorNo_

int neighborProcessorNo_

private

Definition at line 86 of file boundaryBase.hpp.

Referenced by boundaryBase::neighborProcessorNo().

## isBoundaryMaster_

bool isBoundaryMaster_

private

Definition at line 88 of file boundaryBase.hpp.

Referenced by boundaryBase::isBoundaryMaster().

## name_

word name_

private

Definition at line 90 of file boundaryBase.hpp.

Referenced by boundaryBase::name().

## type_

word type_

private

Definition at line 92 of file boundaryBase.hpp.

Referenced by boundaryBase::type().

The documentation for this class was generated from the following files:

- src/phasicFlow/structuredData/boundaries/boundaryBase/boundaryBase.hpp
- src/phasicFlow/structuredData/boundaries/boundaryBase/boundaryBase.cpp